RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13507
(238 letters)
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 98.4 bits (244), Expect = 5e-25
Identities = 34/124 (27%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGV---GNPIIVLDGGIHAR 90
++++++YL+ +A+ + + V V G++ EGR I+ ++IS P++++ +H R
Sbjct: 15 YEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLLHCR 74
Query: 91 EWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLKHIARIYG 150
EW+ LY + +LV + + +DWI++P+ NPDGYV++ + K+ A Y
Sbjct: 75 EWVTLPATLYAIHKLVIDVTESDLINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYM 134
Query: 151 HKVN 154
Sbjct: 135 AGNL 138
Score = 95.7 bits (237), Expect = 5e-24
Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGV---GNPIIVLDGGIH 189
+S ++++YL+ +A+ + + V V G++ EGR I+ ++IS P++++ +H
Sbjct: 13 HSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLLH 72
Query: 190 AREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMT 237
REW+ LY + +LV + + +DWI++P+ NPDGYV++
Sbjct: 73 CREWVTLPATLYAIHKLVIDVTESDLINNIDWIILPVANPDGYVHTFG 120
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 96.0 bits (238), Expect = 3e-24
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWI 93
+I ++ + + V+ IG + EGRPI +K S GG P I +D GIH+REWI
Sbjct: 15 LDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWI 74
Query: 94 APATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMTKINSYLKH 144
AT ++ ++ E+ P F +D L + NPDG+ ++ ++ + K
Sbjct: 75 TQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKT 129
Score = 94.9 bits (235), Expect = 7e-24
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHARE 192
+++ +I ++ + + V+ IG + EGRPI +K S GG P I +D GIH+RE
Sbjct: 13 HTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSRE 72
Query: 193 WIAPATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMT 237
WI AT ++ ++ E+ P F +D L + NPDG+ ++ +
Sbjct: 73 WITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHS 121
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 95.2 bits (236), Expect = 7e-24
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGV---GNPIIVLDGGIHAR 90
+ I+ YL +I Y V E+ EGRPI+ +KIS P+I +DGGIHAR
Sbjct: 9 LEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIHAR 68
Query: 91 EWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLK 143
EWI+P +V + + +LVE+ + K DWIL+P++NPDGY Y+ T + K
Sbjct: 69 EWISPPSVTWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFTNERFWRK 121
Score = 94.9 bits (235), Expect = 1e-23
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGV---GNPIIVLDGGIH 189
+ I+ YL +I Y V E+ EGRPI+ +KIS P+I +DGGIH
Sbjct: 7 QELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIH 66
Query: 190 AREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMT 237
AREWI+P +V + + +LVE+ + K DWIL+P++NPDGY Y+ T
Sbjct: 67 AREWISPPSVTWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFT 114
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 88.8 bits (219), Expect = 1e-21
Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 8/129 (6%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGG----VGNPIIVLDGGIHA 89
+ +L+ A Y + ++G+++E R + ++IS G P G +H
Sbjct: 13 FSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHG 72
Query: 90 REWIAPATVLYVLQQLVENPENFPMFRK----VDWILIPMLNPDGYVYSMTKINSYLKHI 145
E + +L +++ L +N P ++P +NPDGY S
Sbjct: 73 NEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGR 132
Query: 146 ARIYGHKVN 154
+ +N
Sbjct: 133 NNSNNYDLN 141
Score = 85.3 bits (210), Expect = 2e-20
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGG----VGNPIIVLDGGI 188
+ + + +L+ A Y + ++G+++E R + ++IS G P G +
Sbjct: 11 HHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNM 70
Query: 189 HAREWIAPATVLYVLQQLVENPENFPMFRK----VDWILIPMLNPDGYVYS 235
H E + +L +++ L +N P ++P +NPDGY S
Sbjct: 71 HGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKS 121
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 87.9 bits (217), Expect = 3e-21
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 129 DGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGI 188
Y +++ +I+ + ++ + V+ IG + E RP+ +K S GG P I LD GI
Sbjct: 9 GAY-HTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG-DKPAIWLDAGI 66
Query: 189 HAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMT 237
HAREW+ AT L+ ++V + P + +D L+P+ NPDGYV+S T
Sbjct: 67 HAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQT 119
Score = 87.9 bits (217), Expect = 3e-21
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWI 93
++I+ + ++ + V+ IG + E RP+ +K S GG P I LD GIHAREW+
Sbjct: 14 LEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG-DKPAIWLDAGIHAREWV 72
Query: 94 APATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTKINSYLK 143
AT L+ ++V + P + +D L+P+ NPDGYV+S TK + K
Sbjct: 73 TQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRK 126
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 85.3 bits (210), Expect = 2e-20
Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGG----VGNPIIVLDGGIHA 89
+ + ++LK +A+ Y ++ +IG++++GR + + + +G P +H
Sbjct: 8 QEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHG 67
Query: 90 REWIAPATVLYVLQQLVENPENFPMFRK----VDWILIPMLNPDGYVYSMTKINSYLKHI 145
E + +L+++ LV + P ++P +NPDG+ Y
Sbjct: 68 DETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGR 127
Query: 146 ARIYGHKVN 154
+ +N
Sbjct: 128 ENYNQYDLN 136
Score = 80.6 bits (198), Expect = 1e-18
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGG----VGNPIIVLDGGI 188
+ + ++LK +A+ Y ++ +IG++++GR + + + +G P +
Sbjct: 6 HRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANM 65
Query: 189 HAREWIAPATVLYVLQQLVENPENFPMFRK----VDWILIPMLNPDGYVYSM 236
H E + +L+++ LV + P ++P +NPDG+
Sbjct: 66 HGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVK 117
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 84.1 bits (207), Expect = 7e-20
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWI 93
+ I ++ K + ++ + IG T G I +K+ G P I +D G HAREWI
Sbjct: 10 WETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHAREWI 69
Query: 94 APATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMTKINSYLK 143
+ A + +++ V K+D+ ++P+LN DGY+Y+ TK + K
Sbjct: 70 SHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRK 123
Score = 82.6 bits (203), Expect = 2e-19
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHARE 192
+ I ++ K + ++ + IG T G I +K+ G P I +D G HARE
Sbjct: 8 NNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHARE 67
Query: 193 WIAPATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMT 237
WI+ A + +++ V K+D+ ++P+LN DGY+Y+ T
Sbjct: 68 WISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWT 116
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 84.2 bits (207), Expect = 8e-20
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGIHAREW 92
+ I + +IA + IG + E RP+ +K S G GV P + L+ GIH+REW
Sbjct: 12 LEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREW 71
Query: 93 IAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTKINSYLKHIARI 148
I+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T+ + K +R
Sbjct: 72 ISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRN 131
Query: 149 YGH 151
G
Sbjct: 132 PGS 134
Score = 82.6 bits (203), Expect = 3e-19
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGIHAR 191
+S+ I + +IA + IG + E RP+ +K S G GV P + L+ GIH+R
Sbjct: 10 HSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSR 69
Query: 192 EWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMT 237
EWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T
Sbjct: 70 EWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQT 119
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 82.6 bits (203), Expect = 3e-19
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG---GVGNPIIVLDGGIHAR 90
+ ++ + + +A Y + V +IG++ EGR + AVKIS P ++ HAR
Sbjct: 12 YNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAR 71
Query: 91 EWIAPATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMTKINSYLKHIA 146
E + LY L +N + ++ +NPDG Y ++ +
Sbjct: 72 EHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKN 131
Query: 147 RIYGHKVN 154
R +
Sbjct: 132 RQPNSGSS 139
Score = 81.9 bits (201), Expect = 5e-19
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG---GVGNPIIVLDGGIH 189
++ ++ + + +A Y + V +IG++ EGR + AVKIS P ++ H
Sbjct: 10 HNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHH 69
Query: 190 AREWIAPATVLYVLQQLVENPENFPMFR----KVDWILIPMLNPDGYVYSMT 237
ARE + LY L +N + ++ +NPDG Y ++
Sbjct: 70 AREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDIS 121
>d2nwua1 d.77.1.2 (A:3-144) Hypothetical protein SSo1042 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 142
Score = 25.6 bits (56), Expect = 4.2
Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 33/119 (27%)
Query: 1 MLNMIPEFGITKLSENKIDE-NVNTTRLNHVEKVHQQINS---------YLKH------- 43
+ N + E ID + L + K H+ + + YL
Sbjct: 21 ISNFFDFEKMNTRKEGIIDILVLEARTLKSLLKFHRVLRNERILDSARKYLMKGIEGNTI 80
Query: 44 IARI-----YGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPAT 97
I ++ + I+ I NP ++D W+AP T
Sbjct: 81 AFMIHKQAAAVGVLSFVDSDKESPLGAIK-FYIE---YQNPKEIVD-------WLAPKT 128
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.140 0.423
Gapped
Lambda K H
0.267 0.0626 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 967,570
Number of extensions: 47118
Number of successful extensions: 168
Number of sequences better than 10.0: 1
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 19
Length of query: 238
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 155
Effective length of database: 1,268,006
Effective search space: 196540930
Effective search space used: 196540930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.6 bits)