BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13508
(621 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803R5|MTR1_DANRE Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Danio
rerio GN=ftsjd2 PE=2 SV=1
Length = 829
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 255/398 (64%), Gaps = 50/398 (12%)
Query: 170 PDCDTIRDFMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNTVFDELEG 229
PD D +RD+M K+L + +I N +L+ TVFD+LEG
Sbjct: 158 PDSDELRDWMTIGEKKLK-------------IDDEIEFCSENLL-HLLLRCKTVFDDLEG 203
Query: 230 DQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKM 289
++ RAR RSNP+E I+ FLNRAAMKMANMD + MFT P ++ G L R
Sbjct: 204 EEMRRARTRSNPYETIRGAFFLNRAAMKMANMDHVFDYMFTNP--KDSQGKVLTR----- 256
Query: 290 ANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTL 349
DK GELLYF DVCAGPGGFSEYVL+R++W AKG G TL
Sbjct: 257 ---DKE-------------------GELLYFGDVCAGPGGFSEYVLWRRRWHAKGFGMTL 294
Query: 350 TGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHEFVMKSTKGRGVHFMM 406
G++DFKL+DF+A PSE FE YYG G D PENI + FV+ ST+GRG+HF+M
Sbjct: 295 KGANDFKLEDFYAAPSELFEAYYGEGGIDGDGDITRPENISAFRNFVLDSTEGRGLHFLM 354
Query: 407 ADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR 466
ADGGFSVEGQEN+QEILSK+L LCQFL +L +VRP GHF+CK FD+FTPFS GL+YLLY
Sbjct: 355 ADGGFSVEGQENLQEILSKQLLLCQFLTALSVVRPGGHFLCKTFDLFTPFSVGLIYLLYL 414
Query: 467 SYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDRYGSTSKRDIVSCV 526
+++V +FKP TSRPANSERY+VCK +P D +R++MF +N +L+++ S RD++ V
Sbjct: 415 CFERVSLFKPVTSRPANSERYVVCKGLKPGTDAVREYMFTINLKLNQF-RHSDRDVIEVV 473
Query: 527 PLDIMKSDANFFDYLVTSNN--VINRIAGLGK-HAIYR 561
PLDI+K D +FF Y++ SN +I L K HA R
Sbjct: 474 PLDIIKGDTDFFQYMIGSNESYCAVQIKALAKIHAYVR 511
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 132/165 (80%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ S++GRG+HF+MADGGFSVEGQEN+QEILSK+L LCQFL +L +VRP
Sbjct: 331 PENISAFRNFVLDSTEGRGLHFLMADGGFSVEGQENLQEILSKQLLLCQFLTALSVVRPG 390
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFS GL+YLLY +++V +FKP TSRPANSERY+VCK +P D +R+
Sbjct: 391 GHFLCKTFDLFTPFSVGLIYLLYLCFERVSLFKPVTSRPANSERYVVCKGLKPGTDAVRE 450
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
+MF +N +L+++ S RD++ VPLDI+K D +FF Y++ SN +
Sbjct: 451 YMFTINLKLNQF-RHSDRDVIEVVPLDIIKGDTDFFQYMIGSNES 494
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 551 IAGLGKHAIYRYREDS-NRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHII 609
+ LG+ IY + + +RW + ++L TL+ E V+E KG+G +Q ++ H++
Sbjct: 595 LLALGRSQIYTWDGKAPSRWKKLENFKMELPRDTLLSVEIVQELKGEGKAQRRINAVHVL 654
Query: 610 DAYLITG 616
DA ++ G
Sbjct: 655 DALVLNG 661
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 15 DDMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQC 48
D++ W+ G+KKL ID+E +FCS NLL +L+C
Sbjct: 161 DELRDWMTIGEKKLKIDDEIEFCSENLLHLLLRC 194
>sp|Q6GQ76|MTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Xenopus
laevis GN=ftsjd2 PE=2 SV=1
Length = 846
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/412 (46%), Positives = 250/412 (60%), Gaps = 59/412 (14%)
Query: 165 CKWKRPDCDTIRDFMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFF-DYLVTS---N 220
C PD D + D+M ++L I+ + F D L+TS
Sbjct: 161 CTTDIPDSDELSDWMIVGKRKL------------------IIDDETEFCRDNLLTSLLQC 202
Query: 221 NTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGP 280
+ FDELEG++ RAR RSNP+E+I+ G F
Sbjct: 203 KSAFDELEGEEMRRARTRSNPYEMIR-GVF------------------------------ 231
Query: 281 FLNRAAMKMANMDKRLNSMFTQPVRENGSPLLG--PGELLYFADVCAGPGGFSEYVLYRK 338
FLNRAAMKMAN+D + MFT P G P L ELLYFADVCAGPGGFSEYVL+RK
Sbjct: 232 FLNRAAMKMANIDHVFDYMFTNPKDSQGKPKLKDKESELLYFADVCAGPGGFSEYVLWRK 291
Query: 339 KWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHEFVMK 395
KW AKG G TL G +DFKL+DF+A PSE FEPYYG G D PENI + F++
Sbjct: 292 KWHAKGFGMTLKGPNDFKLEDFYAAPSELFEPYYGEGGVDGDGDVTRPENITAFRNFILD 351
Query: 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP 455
+T +GVHFMMADGGFSVEGQENIQEILSK+L LCQFLV L ++R GHF+CK FD+FTP
Sbjct: 352 NTDHKGVHFMMADGGFSVEGQENIQEILSKQLLLCQFLVGLHVIRTGGHFICKTFDLFTP 411
Query: 456 FSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDRYG 515
FS GL+YLLY +++VC+FKP TSRPANSERY+VC+ + D +R+++F +N+RL+ +
Sbjct: 412 FSVGLIYLLYCCFERVCLFKPLTSRPANSERYVVCRGLKEGIDDVRNYLFNVNRRLN-HL 470
Query: 516 STSKRDIVSCVPLDIMKSDANFFDYLVTSNNVINRIAGLGKHAIYRYREDSN 567
S +D+ VPL++++ D F +Y+V SN + I+ + +DS
Sbjct: 471 RNSDQDVTLVVPLEVLRGDKQFNEYMVRSNESCCEVQIKALAKIHAFVQDST 522
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + F++ ++ +GVHFMMADGGFSVEGQENIQEILSK+L LCQFLV L ++R
Sbjct: 339 PENITAFRNFILDNTDHKGVHFMMADGGFSVEGQENIQEILSKQLLLCQFLVGLHVIRTG 398
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VC+ + D +R+
Sbjct: 399 GHFICKTFDLFTPFSVGLIYLLYCCFERVCLFKPLTSRPANSERYVVCRGLKEGIDDVRN 458
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N+RL+ + S +D+ VPL++++ D F +Y+V SN +
Sbjct: 459 YLFNVNRRLN-HLRNSDQDVTLVVPLEVLRGDKQFNEYMVRSNES 502
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 551 IAGLGKHAIYRYREDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHIID 610
+ GLG+ IY + SN + L +L TL+ E V E KG+G +Q K+ H++D
Sbjct: 603 LLGLGRSQIYTWGGRSNERWTRLDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHVLD 662
Query: 611 AYLITG 616
+ G
Sbjct: 663 VLFLNG 668
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 15 DDMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQC 48
D++ W++ G +KL ID+ET+FC NLL ++LQC
Sbjct: 169 DELSDWMIVGKRKLIIDDETEFCRDNLLTSLLQC 202
>sp|D2HRF1|MTR1_AILME Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Ailuropoda melanoleuca GN=FTSJD2 PE=3 SV=1
Length = 835
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 225/335 (67%), Gaps = 37/335 (11%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
V +VFD L+GD+ RAR R+NP+E+I+ G F
Sbjct: 199 VLQCKSVFDVLDGDEMRRARTRANPYEMIR-GVF-------------------------- 231
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLG--PGELLYFADVCAGPGGFSEYV 334
FLNRAAMKMANMD + MFT P G PL+ ELLYFADVCAGPGGFSEYV
Sbjct: 232 ----FLNRAAMKMANMDFVFDRMFTNPRDSCGKPLVKDREAELLYFADVCAGPGGFSEYV 287
Query: 335 LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHE 391
L+RKKW AKG G TL G +DFKL+DF++ SE FEPYYG G D PENI +
Sbjct: 288 LWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENITAFRN 347
Query: 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451
FV+ +T +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR GHF+CK FD
Sbjct: 348 FVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFD 407
Query: 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRL 511
+FTPFSAGL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD++F +N +L
Sbjct: 408 LFTPFSAGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKL 467
Query: 512 DRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNN 546
++ +T D+ VPL+++K D F DY++ SN
Sbjct: 468 NQLHNTDS-DVSLVVPLEVIKGDHEFTDYMIRSNE 501
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR
Sbjct: 339 PENITAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTG 398
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFSAGL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD
Sbjct: 399 GHFICKTFDLFTPFSAGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRD 458
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N +L++ +T D+ VPL+++K D F DY++ SN +
Sbjct: 459 YLFAVNIKLNQLHNTDS-DVSLVVPLEVIKGDHEFTDYMIRSNES 502
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 551 IAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHII 609
+ GLGK IY + S+RWV + L +L TL+ E V E KG+G +Q K+ HI+
Sbjct: 603 LIGLGKSQIYTWDGRQSDRWV-KLDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHIL 661
Query: 610 DAYLITG 616
D ++ G
Sbjct: 662 DVLVLNG 668
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL +VLQC K DV D + + R
Sbjct: 170 EMSDWMVVGKRKMVIEDETEFCGEELLHSVLQC-KSVFDVLDGDEMRRARTRANPYEMIR 228
Query: 76 GVHFM 80
GV F+
Sbjct: 229 GVFFL 233
>sp|A2VE39|MTR1_BOVIN Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Bos
taurus GN=FTSJD2 PE=2 SV=1
Length = 835
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 174/333 (52%), Positives = 222/333 (66%), Gaps = 33/333 (9%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
V +VFD L+G++ RAR R+NP+E+I+ FLNRAAMKMANMD + MFT P
Sbjct: 199 VLKCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSY 258
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLY 336
G +R A ELLYFADVCAGPGGFSEYVL+
Sbjct: 259 GKPLVKDREA-----------------------------ELLYFADVCAGPGGFSEYVLW 289
Query: 337 RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHEFV 393
RK+W AKG G TL G HDFKL+DF++ SE FEPYYG G D PENI + FV
Sbjct: 290 RKRWHAKGFGLTLKGPHDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENINAFRNFV 349
Query: 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453
+ +T +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR GHF+CK FD+F
Sbjct: 350 LDNTDHKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLF 409
Query: 454 TPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDR 513
TPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD++F +N +L++
Sbjct: 410 TPFSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDEVRDYLFSVNIKLNQ 469
Query: 514 YGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNN 546
+T D+ VPL+++K D F DY++ SN
Sbjct: 470 LRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNE 501
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR
Sbjct: 339 PENINAFRNFVLDNTDHKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTG 398
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD
Sbjct: 399 GHFICKTFDLFTPFSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDEVRD 458
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNN 221
++F +N +L++ +T D+ VPL+++K D F DY++ SN
Sbjct: 459 YLFSVNIKLNQLRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNE 501
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 551 IAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHII 609
+ GLGK IY + S+RWV + L +L TL+ E V E KG+G +Q K+ HI+
Sbjct: 603 LIGLGKSQIYTWDGRQSDRWV-KLDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHIL 661
Query: 610 DAYLITG 616
D ++ G
Sbjct: 662 DVLVLNG 668
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL++VL+C K DV D E + R
Sbjct: 170 EMSDWMVVGKRKMIIEDETEFCGEGLLRSVLKC-KSVFDVLDGEEMRRARTRANPYEMIR 228
Query: 76 GVHFM 80
GV F+
Sbjct: 229 GVFFL 233
>sp|Q5R981|MTR1_PONAB Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Pongo
abelii GN=FTSJD2 PE=2 SV=1
Length = 835
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/333 (52%), Positives = 222/333 (66%), Gaps = 33/333 (9%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
V +VFD L+G++ RAR R+NP+E+I+ FLNRAAMKMANMD + MFT P
Sbjct: 199 VLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSY 258
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLY 336
G +R A ELLYFADVCAGPGGFSEYVL+
Sbjct: 259 GKPLVKDREA-----------------------------ELLYFADVCAGPGGFSEYVLW 289
Query: 337 RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHEFV 393
RKKW AKG G TL G +DFKL+DF++ SE FEPYYG G D PENI + FV
Sbjct: 290 RKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENISAFRNFV 349
Query: 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453
+ +T +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L IVR GHF+CK FD+F
Sbjct: 350 LDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLF 409
Query: 454 TPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDR 513
TPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD++F +N +L++
Sbjct: 410 TPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQ 469
Query: 514 YGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNN 546
+T D+ VPL+++K D F DY++ SN
Sbjct: 470 LRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNE 501
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L IVR
Sbjct: 339 PENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTG 398
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD
Sbjct: 399 GHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRD 458
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N +L++ +T D+ VPL+++K D F DY++ SN +
Sbjct: 459 YLFAVNIKLNQLRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNES 502
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 538 FDY-LVTSNNVINRIAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKG 595
FDY + S + + GLGK IY + S+RW+ + L +L TL+ E V E KG
Sbjct: 589 FDYRCMVSGSEQKFLIGLGKSQIYTWDGRQSDRWI-KLDLKTELPRDTLLSVEIVHELKG 647
Query: 596 QGASQVKLKTFHIIDAYLITG 616
+G +Q K+ HI+D ++ G
Sbjct: 648 EGKAQRKISAIHILDVLVLNG 668
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL +VLQC K DV D E + R
Sbjct: 170 EMSDWMVVGKRKMIIEDETEFCGEELLHSVLQC-KSVFDVLDGEEMRRARTRANPYEMIR 228
Query: 76 GVHFM 80
GV F+
Sbjct: 229 GVFFL 233
>sp|Q8N1G2|MTR1_HUMAN Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Homo
sapiens GN=FTSJD2 PE=1 SV=1
Length = 835
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/333 (52%), Positives = 222/333 (66%), Gaps = 33/333 (9%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
V +VFD L+G++ RAR R+NP+E+I+ FLNRAAMKMANMD + MFT P
Sbjct: 199 VLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSY 258
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLY 336
G +R A ELLYFADVCAGPGGFSEYVL+
Sbjct: 259 GKPLVKDREA-----------------------------ELLYFADVCAGPGGFSEYVLW 289
Query: 337 RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD---PENILSLHEFV 393
RKKW AKG G TL G +DFKL+DF++ SE FEPYYG G D PENI + FV
Sbjct: 290 RKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENISAFRNFV 349
Query: 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453
+ +T +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L IVR GHF+CK FD+F
Sbjct: 350 LDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLF 409
Query: 454 TPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDR 513
TPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD++F +N +L++
Sbjct: 410 TPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQ 469
Query: 514 YGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNN 546
+T D+ VPL+++K D F DY++ SN
Sbjct: 470 LRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNE 501
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L IVR
Sbjct: 339 PENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTG 398
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHF+CK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +RD
Sbjct: 399 GHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRD 458
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N +L++ +T D+ VPL+++K D F DY++ SN +
Sbjct: 459 YLFAVNIKLNQLRNTDS-DVNLVVPLEVIKGDHEFTDYMIRSNES 502
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 538 FDY-LVTSNNVINRIAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKG 595
FDY + S + + GLGK IY + S+RW+ + L +L TL+ E V E KG
Sbjct: 589 FDYRCMVSGSEQKFLIGLGKSQIYTWDGRQSDRWI-KLDLKTELPRDTLLSVEIVHELKG 647
Query: 596 QGASQVKLKTFHIIDAYLITG 616
+G +Q K+ HI+D ++ G
Sbjct: 648 EGKAQRKISAIHILDVLVLNG 668
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL +VLQC K DV D E + R
Sbjct: 170 EMSDWMVVGKRKMIIEDETEFCGEELLHSVLQC-KSVFDVLDGEEMRRARTRANPYEMIR 228
Query: 76 GVHFM 80
GV F+
Sbjct: 229 GVFFL 233
>sp|Q9W4N2|MTR1_DROME Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Drosophila melanogaster GN=CG6379 PE=2 SV=1
Length = 788
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 226/348 (64%), Gaps = 36/348 (10%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
+ + TVFD+L ++ RAR+R NPFE I++ FLNR
Sbjct: 139 ILNAKTVFDDLNDNEKRRARSRCNPFETIRSSIFLNR----------------------- 175
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLY 336
AA+KMAN+D N MFT P G L+ P ELLYF D+CAGPGGFSEYVLY
Sbjct: 176 --------AAVKMANIDSMCNFMFTNPRDPAGQTLVAPDELLYFTDMCAGPGGFSEYVLY 227
Query: 337 RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKS 396
RK W AKG GFTL G++DFKL+ FFA E+F+ +YGVK +G+++D N SL+E++
Sbjct: 228 RKSWEAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGNIFDESNQDSLNEYIRMH 287
Query: 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPF 456
T +GVHF MADGGFSVEGQ+NIQEILSK+LYLCQFL +L I+RP G FVCKVFD+FTPF
Sbjct: 288 TP-QGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPF 346
Query: 457 SAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDT--IRDFMFKLNKRLDRY 514
S GL+YL+Y+ ++Q+ I KPN+SRPANSERY+VCK+KR D +T I ++ +N L
Sbjct: 347 SVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVCKYKRSDAETAGIVAYLNTVNLMLSDE 406
Query: 515 GSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNVINR--IAGLGKHAIY 560
+ D++ + + D +F Y++ SNN I + I GL K A +
Sbjct: 407 SQLDENDVLEIFNANELAEDEDFLRYIIDSNNAIGKKQIVGLRKIAAF 454
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 3/177 (1%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL 108
VK +G+++D N SL+E++ + +GVHF MADGGFSVEGQ+NIQEILSK+LYLCQFL
Sbjct: 265 VKEDGNIFDESNQDSLNEYI-RMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFL 323
Query: 109 VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWK 168
+L I+RP G FVCKVFD+FTPFS GL+YL+Y+ ++Q+ I KPN+SRPANSERY+VCK+K
Sbjct: 324 TALKILRPNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVCKYK 383
Query: 169 RPDCDT--IRDFMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNTV 223
R D +T I ++ +N L + D++ + + D +F Y++ SNN +
Sbjct: 384 RSDAETAGIVAYLNTVNLMLSDESQLDENDVLEIFNANELAEDEDFLRYIIDSNNAI 440
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 7 SHLPALSEDDMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPE 59
S A S D + +V G+KKL++D ET++C P +L ++L D+ D E
Sbjct: 101 SRADAYSLDQLMGHLVTGEKKLTLDGETRYCDPAILHHILNAKTVFDDLNDNE 153
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 559 IYRYREDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHIIDAYLITG 616
+ RY E + ET+ +Q P ++ +G+ V EF G+G + ++ HIID + G
Sbjct: 558 LLRYTEHKKWELVETAFEVQ--PRSIFFGQIVYEFYGEGRTIQRMAALHIIDGICLGG 613
>sp|Q9DBC3|MTR1_MOUSE Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Mus
musculus GN=Ftsjd2 PE=1 SV=1
Length = 837
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 237/349 (67%), Gaps = 33/349 (9%)
Query: 222 TVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPF 281
+VFD L+G++ RAR R+NP+E+I+ FLNRAAMKMANMD + MFT P+ +G
Sbjct: 203 SVFDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPLDSSG---- 258
Query: 282 LNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWR 341
+ +K +++D LLYFADVCAGPGGFSEYVL+RKKW
Sbjct: 259 --KPLLKESDID-----------------------LLYFADVCAGPGGFSEYVLWRKKWH 293
Query: 342 AKGIGFTLTGSHDFKLDDFFAGPSETFEPYY---GVKGNGDVYDPENILSLHEFVMKSTK 398
AKG G TL G +DFKL+DF++ SE FEPYY GV G+GD+ PENI + FV+ +T
Sbjct: 294 AKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLDNTD 353
Query: 399 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSA 458
+GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR GHFVCK FD+FTPFS
Sbjct: 354 RKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTPFSV 413
Query: 459 GLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDRYGSTS 518
GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +R+++F +N +L++ +T
Sbjct: 414 GLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVREYLFSVNIKLNQLRNT- 472
Query: 519 KRDIVSCVPLDIMKSDANFFDYLVTSNNVINRIAGLGKHAIYRYREDSN 567
+ D+ VPL ++K D F DY++ SN + I+ + +D+
Sbjct: 473 ESDVNLVVPLMVIKGDHEFNDYMIRSNESYCSLQIKALAKIHAFVQDTT 521
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR
Sbjct: 338 PENINAFRNFVLDNTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTG 397
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHFVCK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +R+
Sbjct: 398 GHFVCKTFDLFTPFSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRE 457
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N +L++ +T + D+ VPL ++K D F DY++ SN +
Sbjct: 458 YLFSVNIKLNQLRNT-ESDVNLVVPLMVIKGDHEFNDYMIRSNES 501
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 551 IAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHII 609
+ GLGK IY + S+RWV + L +L TL+ E V E KG+G +Q K+ HI+
Sbjct: 602 LLGLGKSQIYTWDGRQSDRWV-KLDLKTELPRDTLLCVEIVHELKGEGKAQRKISAIHIL 660
Query: 610 DAYLITG 616
D ++ G
Sbjct: 661 DVLVLNG 667
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL ++L+C K D+ D E + R
Sbjct: 169 EMSDWMVVGKRKMVIEDETEFCGEELLHSMLKC-KSVFDILDGEEMRRARTRANPYEMIR 227
Query: 76 GVHFM 80
GV F+
Sbjct: 228 GVFFL 232
>sp|Q5U2Z5|MTR1_RAT Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus
norvegicus GN=Ftsjd2 PE=2 SV=1
Length = 837
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 236/349 (67%), Gaps = 33/349 (9%)
Query: 222 TVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPF 281
+VFD L+G++ RAR R+NP+E+I+ FLNRAAMKMANMD + MFT P+ +G
Sbjct: 203 SVFDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPLDSSG---- 258
Query: 282 LNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWR 341
+ +K +++D LLYFADVCAGPGGFSEYVL+R+KW
Sbjct: 259 --KPLLKESDID-----------------------LLYFADVCAGPGGFSEYVLWRRKWH 293
Query: 342 AKGIGFTLTGSHDFKLDDFFAGPSETFEPYY---GVKGNGDVYDPENILSLHEFVMKSTK 398
AKG G TL G +DFKL+DF++ SE FEPYY GV G+GD+ PENI + FV+ +T
Sbjct: 294 AKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLDNTD 353
Query: 399 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSA 458
+GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR GHFVCK FD+FTPFS
Sbjct: 354 RKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTPFSV 413
Query: 459 GLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDRYGSTS 518
GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +R+++F +N +L++ +T
Sbjct: 414 GLIYLLYCCFERVCLFKPVTSRPANSERYVVCKGLKVGIDDVREYLFSVNIQLNQLRNTD 473
Query: 519 KRDIVSCVPLDIMKSDANFFDYLVTSNNVINRIAGLGKHAIYRYREDSN 567
D+ VPL ++K D F DY++ SN + I+ + +D+
Sbjct: 474 S-DVNLVVPLSVIKGDHEFNDYMIRSNESYCSLQIKALAKIHAFVQDTT 521
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Query: 58 PENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE 117
PENI + FV+ ++ +GVHF+MADGGFSVEGQEN+QEILSK+L LCQFL++L +VR
Sbjct: 338 PENINAFRNFVLDNTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTG 397
Query: 118 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRD 177
GHFVCK FD+FTPFS GL+YLLY +++VC+FKP TSRPANSERY+VCK + D +R+
Sbjct: 398 GHFVCKTFDLFTPFSVGLIYLLYCCFERVCLFKPVTSRPANSERYVVCKGLKVGIDDVRE 457
Query: 178 FMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNT 222
++F +N +L++ +T D+ VPL ++K D F DY++ SN +
Sbjct: 458 YLFSVNIQLNQLRNTDS-DVNLVVPLSVIKGDHEFNDYMIRSNES 501
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 551 IAGLGKHAIYRYR-EDSNRWVSETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHII 609
+ GLGK IY + S+RWV + L +L TL+ E V E KG+G +Q K+ HI+
Sbjct: 602 LLGLGKSQIYTWDGRQSDRWV-KLDLKTELPRDTLLCVEIVHELKGEGKAQRKISAIHIL 660
Query: 610 DAYLITG 616
D ++ G
Sbjct: 661 DVLVLNG 667
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 DMDSWIVEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGR 75
+M W+V G +K+ I++ET+FC LL ++L+C K D+ D E + R
Sbjct: 169 EMSDWMVVGKRKMVIEDETEFCGEELLHSMLKC-KSVFDILDGEEMRRARTRANPYEMIR 227
Query: 76 GVHFM 80
GV F+
Sbjct: 228 GVFFL 232
>sp|A8XYX2|MTR1A_CAEBR Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1A
OS=Caenorhabditis briggsae GN=CBG20906 PE=3 SV=2
Length = 874
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/345 (48%), Positives = 219/345 (63%), Gaps = 24/345 (6%)
Query: 208 SDANFFDYLVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNS 267
S+ D + N VFD + AR R+NP+E I + F NRAAMK ANMDK +
Sbjct: 172 SEKELKDMIEAKN--VFDSMSDKDLREARTRANPYETIGSAFFQNRAAMKTANMDKIYDW 229
Query: 268 MFTQPVREN-GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAG 326
+ + REN GN FL + ++ + ++ +L YFADVCAG
Sbjct: 230 ILS---RENTGNNSFLLKNPLQEGTTAENVDRH---------------EDLFYFADVCAG 271
Query: 327 PGGFSEYVLYRKK-WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPEN 385
PGGFSEY+L+RK + AKG GFTL G DFKL F A + FE +YG K NGDV DPEN
Sbjct: 272 PGGFSEYMLWRKAFYNAKGFGFTLAGKDDFKLQKFTASSAYFFETFYGTKKNGDVMDPEN 331
Query: 386 ILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHF 445
I SL +F+ + T G+GVH MMADGGFSVEGQENIQEILSKRLYLCQ LVSL IVR G+F
Sbjct: 332 IDSLEKFISEGTDGQGVHLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNF 391
Query: 446 VCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPD-CDTIRDFM 504
CK+FD+FTPFS GL+YL+ Y + + KP+TSRPANSERYI CK R + ++D++
Sbjct: 392 FCKLFDIFTPFSVGLIYLMRVCYDSISLHKPHTSRPANSERYITCKGLRKEFAGVVKDYL 451
Query: 505 FKLNKRLDRY-GSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNVI 548
++N++LD SK D++ +PLD++KSD F ++ N V+
Sbjct: 452 KRVNRKLDELKNKNSKDDVMELMPLDVIKSDEQFMKEIIEHNEVL 496
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL 108
K NGDV DPENI SL +F+ + + G+GVH MMADGGFSVEGQENIQEILSKRLYLCQ L
Sbjct: 320 TKKNGDVMDPENIDSLEKFISEGTDGQGVHLMMADGGFSVEGQENIQEILSKRLYLCQLL 379
Query: 109 VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWK 168
VSL IVR G+F CK+FD+FTPFS GL+YL+ Y + + KP+TSRPANSERYI CK
Sbjct: 380 VSLCIVREGGNFFCKLFDIFTPFSVGLIYLMRVCYDSISLHKPHTSRPANSERYITCKGL 439
Query: 169 RPD-CDTIRDFMFKLNKRLDRY-GSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNTV 223
R + ++D++ ++N++LD SK D++ +PLD++KSD F ++ N +
Sbjct: 440 RKEFAGVVKDYLKRVNRKLDELKNKNSKDDVMELMPLDVIKSDEQFMKEIIEHNEVL 496
>sp|A8XYX3|MTR1B_CAEBR Inactive cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1B
OS=Caenorhabditis briggsae GN=CBG20907 PE=3 SV=2
Length = 846
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 220/345 (63%), Gaps = 24/345 (6%)
Query: 208 SDANFFDYLVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNS 267
S+ D L N VFD + AR R+NP+E I + FLNR+AMK ANMDK +
Sbjct: 145 SEKKLKDMLEAKN--VFDSMSEKDIREARTRANPYETIGSAFFLNRSAMKTANMDKIYDW 202
Query: 268 MFTQPVREN-GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAG 326
+ + REN GN FL + ++ + ++ +L YFADVCAG
Sbjct: 203 ILS---RENTGNNSFLLKNPLQEGTTAENVDRH---------------EDLFYFADVCAG 244
Query: 327 PGGFSEYVLYRKK-WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPEN 385
PGGFSEY+L+RK + AKG GFTL G DFKL F A + FE +YG K NGDV DPEN
Sbjct: 245 PGGFSEYMLWRKAFYNAKGFGFTLAGKDDFKLQKFTASSAYFFETFYGTKKNGDVMDPEN 304
Query: 386 ILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHF 445
I SL + + + T G+GVH MMADG FSV+GQENIQEILSKRLYLCQ LVSL IVR G+F
Sbjct: 305 IDSLEKLISEGTDGQGVHLMMADGAFSVQGQENIQEILSKRLYLCQLLVSLCIVREGGNF 364
Query: 446 VCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCD-TIRDFM 504
+C +FD+FTPFS GL+YL+ Y + + KP+TSRPANSER++VCK R +C +++++
Sbjct: 365 LCNLFDIFTPFSVGLIYLMRVCYDSISLHKPHTSRPANSERFVVCKGLRIECARVVKEYL 424
Query: 505 FKLNKRLDRY-GSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNVI 548
++N++LD SK D++ +PLD++KSD F ++ N V+
Sbjct: 425 KRVNRKLDELKNKNSKDDVMELMPLDVIKSDEQFMKEIIEHNEVL 469
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL 108
K NGDV DPENI SL + + + + G+GVH MMADG FSV+GQENIQEILSKRLYLCQ L
Sbjct: 293 TKKNGDVMDPENIDSLEKLISEGTDGQGVHLMMADGAFSVQGQENIQEILSKRLYLCQLL 352
Query: 109 VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWK 168
VSL IVR G+F+C +FD+FTPFS GL+YL+ Y + + KP+TSRPANSER++VCK
Sbjct: 353 VSLCIVREGGNFLCNLFDIFTPFSVGLIYLMRVCYDSISLHKPHTSRPANSERFVVCKGL 412
Query: 169 RPDCD-TIRDFMFKLNKRLDRY-GSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNTV 223
R +C +++++ ++N++LD SK D++ +PLD++KSD F ++ N +
Sbjct: 413 RIECARVVKEYLKRVNRKLDELKNKNSKDDVMELMPLDVIKSDEQFMKEIIEHNEVL 469
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 18 DSWIVEGDKKLSIDNETKFCSPNLLKNVLQC 48
D W+V +K ID+ETKFCS LK++L+
Sbjct: 125 DQWMVVRKEKKVIDDETKFCSEKKLKDMLEA 155
>sp|Q9NAA5|MTR1_CAEEL Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Caenorhabditis elegans GN=Y53F4B.13 PE=3 SV=3
Length = 918
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 208/329 (63%), Gaps = 20/329 (6%)
Query: 223 VFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFL 282
VFD + AR R+NP+E I + F NRAAMK ANMDK + + ++ EN FL
Sbjct: 210 VFDLMSDKDLREARTRANPYETIGSAFFQNRAAMKTANMDKIYDWILSRENTENDR--FL 267
Query: 283 NRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKK-WR 341
+ ++ + + ++ +L YFADVCAGPGGFSEY+L+RK +
Sbjct: 268 LKNPLQESQTAENVDR---------------SEDLFYFADVCAGPGGFSEYMLWRKGFYN 312
Query: 342 AKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTKGRG 401
AKG GFTL G DFKL F A FE +YG K NGDV DP NI SL + + T G G
Sbjct: 313 AKGFGFTLAGKDDFKLFKFTASSQYFFETFYGTKDNGDVMDPVNIDSLEAHISRGTSGLG 372
Query: 402 VHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLL 461
VH MMADGGFSVEGQENIQEILSKRLYLCQ LVSL IVR G+F CK+FD+FTPFS GL+
Sbjct: 373 VHLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLFDIFTPFSVGLI 432
Query: 462 YLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPD-CDTIRDFMFKLNKRLDRY-GSTSK 519
YL+ Y+ V + KP+TSRPANSERYI CK R + + +++++ ++N++LD S
Sbjct: 433 YLMRVCYQSVSLHKPHTSRPANSERYITCKGLRKEFANVVKEYLKRVNRKLDELKNKKSH 492
Query: 520 RDIVSCVPLDIMKSDANFFDYLVTSNNVI 548
D+ +PLD++++D F D ++ N +
Sbjct: 493 DDVTDLMPLDVIEADQIFMDEIIRHNEFL 521
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL 108
K NGDV DP NI SL + + + G GVH MMADGGFSVEGQENIQEILSKRLYLCQ L
Sbjct: 345 TKDNGDVMDPVNIDSLEAHISRGTSGLGVHLMMADGGFSVEGQENIQEILSKRLYLCQLL 404
Query: 109 VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWK 168
VSL IVR G+F CK+FD+FTPFS GL+YL+ Y+ V + KP+TSRPANSERYI CK
Sbjct: 405 VSLCIVREGGNFFCKLFDIFTPFSVGLIYLMRVCYQSVSLHKPHTSRPANSERYITCKGL 464
Query: 169 RPD-CDTIRDFMFKLNKRLDRY-GSTSKRDIVSCVPLDIMKSDANFFDYLVTSN 220
R + + +++++ ++N++LD S D+ +PLD++++D F D ++ N
Sbjct: 465 RKEFANVVKEYLKRVNRKLDELKNKKSHDDVTDLMPLDVIEADQIFMDEIIRHN 518
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 18 DSWIVEGDKKLSIDNETKFCSPNLLKNVLQC 48
D W+V G +K +ID+ETKFCS + +++
Sbjct: 177 DKWMVIGKEKRTIDDETKFCSQQSITEMIEA 207
>sp|Q54WR1|MTR1_DICDI Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Dictyostelium discoideum GN=DDB_G0279593 PE=3 SV=1
Length = 757
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 183/352 (51%), Gaps = 67/352 (19%)
Query: 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVREN 276
+ + D L+ ++F+ AR +SNP+E IK F+NR
Sbjct: 182 LDQHKNALDTLDPNRFYVARKKSNPYESIKGSIFINR----------------------- 218
Query: 277 GNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLG-PGELLYFADVCAGPGGFSEYVL 335
AA+KMAN+DK L + T + P+ G P + +YF DVCAGPGGF+EYV
Sbjct: 219 --------AAVKMANIDK-LADLLTPII-----PVPGKPRDFIYFGDVCAGPGGFTEYV- 263
Query: 336 YRKKWRA---------------KGIGFTLTGSHDFKLDDFFAG-PSETFEPYYGVKGNGD 379
Y KK R KG GFT+ G D+ ++ F P F YG+ G+
Sbjct: 264 YWKKTRGGKIKGEEGLDLDDVVKGFGFTIKGQCDWNVEKFSKQIPIHNFVKEYGLDDTGN 323
Query: 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIV 439
+ ENI V +T G G+ +ADGG + +G+E++QE++ ++L LCQ L +
Sbjct: 324 ILKSENIRDFSSKVFYNTNGFGLQLFLADGGINTDGKESLQELMLQQLILCQILTMFETI 383
Query: 440 RPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK---WKRPD 496
G+FVCK+FD FTPF+ GLLYL+Y+ ++ I KP TSRP NSERYI+CK RP
Sbjct: 384 GRGGNFVCKIFDTFTPFTIGLLYLVYQHFQSFSIVKPFTSRPLNSERYIICKNFLSYRP- 442
Query: 497 CDTIRDFMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNVI 548
I DF+ +N L+ + + I+ + ++ M D NF Y++ SN +I
Sbjct: 443 -MNIIDFLHYINSLLN-----NNQTILELIEINSM--DPNFLRYILESNELI 486
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 12/174 (6%)
Query: 53 GDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 112
G++ ENI V ++ G G+ +ADGG + +G+E++QE++ ++L LCQ L
Sbjct: 322 GNILKSENIRDFSSKVFYNTNGFGLQLFLADGGINTDGKESLQELMLQQLILCQILTMFE 381
Query: 113 IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK---WKR 169
+ G+FVCK+FD FTPF+ GLLYL+Y+ ++ I KP TSRP NSERYI+CK R
Sbjct: 382 TIGRGGNFVCKIFDTFTPFTIGLLYLVYQHFQSFSIVKPFTSRPLNSERYIICKNFLSYR 441
Query: 170 PDCDTIRDFMFKLNKRLDRYGSTSKRDIVSCVPLDIMKSDANFFDYLVTSNNTV 223
P I DF+ +N L+ + + I+ + ++ M D NF Y++ SN +
Sbjct: 442 P--MNIIDFLHYINSLLN-----NNQTILELIEINSM--DPNFLRYILESNELI 486
>sp|Q38AH0|MTR1_TRYB2 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
GN=MTR1 PE=1 SV=1
Length = 370
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 10/175 (5%)
Query: 320 FADVCAGPGGFSEYVLY---RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKG 376
F DVC GPG FS+ + K R +G G TL LD + PS +F P YG+ G
Sbjct: 122 FVDVCGGPGAFSQALFAMGKEHKLRLRGFGLTLRNVKG--LDWYTDLPSRSFFPCYGIDG 179
Query: 377 NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQE-NIQEILSKRLYLCQFLVS 435
GDV+ ENI SL K V ++ADGGF V + N QE +S R+ Q+L +
Sbjct: 180 TGDVFKLENIESLCSLTCKEN----VRLVVADGGFDVPTEVVNFQETISCRIVYGQWLSA 235
Query: 436 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+ ++RP G FV K+FD F+PF+ +L+L Y+ V + KP SR NSERY+VC
Sbjct: 236 VKLLRPGGCFVLKLFDCFSPFTRAILFLTTHLYESVQVVKPRHSRVVNSERYLVC 290
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQE-NIQEILSKRLYLCQF 107
+ G GDV+ ENI SL K + V ++ADGGF V + N QE +S R+ Q+
Sbjct: 177 IDGTGDVFKLENIESLCSLTCKEN----VRLVVADGGFDVPTEVVNFQETISCRIVYGQW 232
Query: 108 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L ++ ++RP G FV K+FD F+PF+ +L+L Y+ V + KP SR NSERY+VC
Sbjct: 233 LSAVKLLRPGGCFVLKLFDCFSPFTRAILFLTTHLYESVQVVKPRHSRVVNSERYLVC 290
>sp|Q4E123|MTR1_TRYCC Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Trypanosoma cruzi (strain CL Brener)
GN=Tc00.1047053506247.320 PE=3 SV=1
Length = 362
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 276 NGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVL 335
G F NRA K+ + ++ RE G + FADVC GPG FS+ +
Sbjct: 83 QGAVSFGNRAGHKLREV-MEATGVWEHLQRETS----GQKGAVVFADVCGGPGAFSQALF 137
Query: 336 ---YRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392
+ K R +G G TL LD + + P F P YG+ G GD+++ NI +L
Sbjct: 138 EMSRQYKLRMRGFGMTLRNVRG--LDWYSSLPLGKFLPTYGIDGTGDIFNLANIEALLSL 195
Query: 393 VMKSTKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451
++ + ++ADGGF+V N QE LS R+ Q+L +L ++RP G F+ K+FD
Sbjct: 196 TIRER----LKLVVADGGFNVPFNIANYQETLSGRILFGQWLAALKLLRPGGCFILKLFD 251
Query: 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
F+P S LLYL Y +V + KP SR NSERY+VC
Sbjct: 252 TFSPLSRALLYLSTYLYDRVHVVKPRHSRVVNSERYLVC 290
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQF 107
+ G GD+++ NI +L ++ + ++ADGGF+V N QE LS R+ Q+
Sbjct: 177 IDGTGDIFNLANIEALLSLTIRER----LKLVVADGGFNVPFNIANYQETLSGRILFGQW 232
Query: 108 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L +L ++RP G F+ K+FD F+P S LLYL Y +V + KP SR NSERY+VC
Sbjct: 233 LAALKLLRPGGCFILKLFDTFSPLSRALLYLSTYLYDRVHVVKPRHSRVVNSERYLVC 290
>sp|Q4Q089|MTR1_LEIMA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Leishmania major GN=LmjF36.6660 PE=3 SV=1
Length = 400
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 98/178 (55%), Gaps = 14/178 (7%)
Query: 320 FADVCAGPGGFSEYVLY---RKKWRA-KGIGFTLTGSHDFKLDDFFAG--PSETFEPYYG 373
FADVC GPG FS+ + ++ WR G G TL G D++A S F YG
Sbjct: 125 FADVCGGPGAFSQALFQAGRKRGWRHLHGYGMTLAGVSGL---DWYAHLLKSPQFTCTYG 181
Query: 374 VKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQF 432
+ G GD++ NI L TK + ++ADGGF+V+ N QE +S R+ Q+
Sbjct: 182 LDGTGDIFKLSNIDCLASI----TKAAPMFLVVADGGFNVDFSVTNYQETISSRIMYGQW 237
Query: 433 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
L +L ++R G FV K+FD F+P S +LYL Y++V + KP SR NSERY+VC
Sbjct: 238 LAALKLLRKGGCFVLKLFDTFSPLSRAVLYLSCCMYRRVHVAKPRHSRVVNSERYLVC 295
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQF 107
+ G GD++ NI L +K + ++ADGGF+V+ N QE +S R+ Q+
Sbjct: 182 LDGTGDIFKLSNIDCLASI----TKAAPMFLVVADGGFNVDFSVTNYQETISSRIMYGQW 237
Query: 108 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L +L ++R G FV K+FD F+P S +LYL Y++V + KP SR NSERY+VC
Sbjct: 238 LAALKLLRKGGCFVLKLFDTFSPLSRAVLYLSCCMYRRVHVAKPRHSRVVNSERYLVC 295
>sp|A4HQI9|MTR1_LEIBR Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Leishmania braziliensis GN=LbrM35_V2.7020 PE=3 SV=1
Length = 398
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 95/176 (53%), Gaps = 10/176 (5%)
Query: 320 FADVCAGPGGFSEYVL---YRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVK 375
FADVC GPG FS+ + ++ WR G G TL G + S F YG+
Sbjct: 124 FADVCGGPGAFSQALFKAGRKQGWRHLHGYGMTLAGVSGLDWYNSLLN-SPQFTCTYGLD 182
Query: 376 GNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQFLV 434
G GD++ NI + ++ TK + ++ADGGFSV+ N QE +S R+ Q+L
Sbjct: 183 GTGDIFKLSNI----DCLVSITKAAPMFLVVADGGFSVDFSVANYQETISSRIMYGQWLA 238
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+L ++R G V K+FD F+P S ++YL Y +V + KP SR NSERY+VC
Sbjct: 239 ALKLLRKGGCCVLKLFDTFSPLSRAVVYLSCFLYSRVHVAKPRHSRVVNSERYLVC 294
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQF 107
+ G GD++ NI + ++ +K + ++ADGGFSV+ N QE +S R+ Q+
Sbjct: 181 LDGTGDIFKLSNI----DCLVSITKAAPMFLVVADGGFSVDFSVANYQETISSRIMYGQW 236
Query: 108 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L +L ++R G V K+FD F+P S ++YL Y +V + KP SR NSERY+VC
Sbjct: 237 LAALKLLRKGGCCVLKLFDTFSPLSRAVVYLSCFLYSRVHVAKPRHSRVVNSERYLVC 294
>sp|P41469|Y069_NPVAC Uncharacterized 30.4 kDa protein in LEF3-IAP2 intergenic region
OS=Autographa californica nuclear polyhedrosis virus
PE=4 SV=1
Length = 262
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 12/197 (6%)
Query: 320 FADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGD 379
F D+C GPG F+ Y + K G TLT ++ + + F G +GD
Sbjct: 59 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLT-NNSVCVYKPTVRKRKNFTTITGPDKSGD 116
Query: 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIV 439
V+D +N++ F + G ++ADG V G+EN QE L+ L +C+ + L +
Sbjct: 117 VFD-KNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILICL 171
Query: 440 RPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC--KWKRPDC 497
RP G+ V KVFD F + +L +++ ++KP +SRPANSERY++C K RP C
Sbjct: 172 RPGGNCVLKVFDAFEHETIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFNKLVRPYC 231
Query: 498 DTIRDFMFKLNKRLDRY 514
+ +++ +L K+ ++Y
Sbjct: 232 N---NYVNELEKQFEKY 245
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 53 GDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 112
GDV+D +N++ F + G ++ADG V G+EN QE L+ L +C+ + L
Sbjct: 115 GDVFD-KNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLILI 169
Query: 113 IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC--KWKRP 170
+RP G+ V KVFD F + +L +++ ++KP +SRPANSERY++C K RP
Sbjct: 170 CLRPGGNCVLKVFDAFEHETIQMLNKFVNHFEKWVLYKPPSSRPANSERYLICFNKLVRP 229
Query: 171 DCDTIRDFMFKLNKRLDRY 189
C+ +++ +L K+ ++Y
Sbjct: 230 YCN---NYVNELEKQFEKY 245
>sp|Q8BWQ4|FTSJ1_MOUSE FtsJ methyltransferase domain-containing protein 1 OS=Mus musculus
GN=Ftsjd1 PE=2 SV=1
Length = 767
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 371 YYGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLC 430
Y+G GD+ + + L +F+ + +H + ADG F +G QE L L+ C
Sbjct: 201 YFGPDNTGDIMTLKYLTGLQDFLSGMSP---IHLVTADGSFDCQGNPGEQEALVSSLHYC 257
Query: 431 QFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+ + +L + G FV K+F +F S L+YLL S+ QV +FKP TS+ NSE Y+VC
Sbjct: 258 EAVTALITLGDGGSFVLKMFTLFEHCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVC 317
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 31 DNETKFCSPNLLKNVLQCV----KGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGF 86
DN L+ N L C GD+ + + L +F+ S +H + ADG F
Sbjct: 182 DNLRMITDDRLMANTLHCWYFGPDNTGDIMTLKYLTGLQDFLSGMSP---IHLVTADGSF 238
Query: 87 SVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQV 146
+G QE L L+ C+ + +L + G FV K+F +F S L+YLL S+ QV
Sbjct: 239 DCQGNPGEQEALVSSLHYCEAVTALITLGDGGSFVLKMFTLFEHCSVNLMYLLNCSFDQV 298
Query: 147 CIFKPNTSRPANSERYIVC 165
+FKP TS+ NSE Y+VC
Sbjct: 299 HVFKPATSKAGNSEVYVVC 317
>sp|Q8IYT2|FTSJ1_HUMAN FtsJ methyltransferase domain-containing protein 1 OS=Homo sapiens
GN=FTSJD1 PE=2 SV=2
Length = 770
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 371 YYGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLC 430
Y+G GD+ + + L F+ + VH + ADG F +G QE L L+ C
Sbjct: 201 YFGPDNTGDIMTLKFLTGLQNFI---SSMATVHLVTADGSFDCQGNPGEQEALVSSLHYC 257
Query: 431 QFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+ + +L + G FV K+F MF S L+YLL + QV +FKP TS+ NSE Y+VC
Sbjct: 258 EVVTALTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVC 317
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
GD+ + + L F+ S VH + ADG F +G QE L L+ C+ + +
Sbjct: 206 NTGDIMTLKFLTGLQNFI---SSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L + G FV K+F MF S L+YLL + QV +FKP TS+ NSE Y+VC
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVC 317
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 425 KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANS 484
+RL+L L SL + + V FT F AGL+++L+ ++ + P +S P +
Sbjct: 623 QRLFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFVCPTSSDPLRT 682
Query: 485 ERYIVCKWKRPDCDTIRDFMFKLNKRLDR-YGSTSKRDIVSCVPLDIMKSDANFFDYLVT 543
++C + + + ++ +N+ L S S + ++ VP++++ A D+L
Sbjct: 683 CAVLLCVGYQDLPNPVFRYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGA-LLDFLWD 741
Query: 544 SNNVINR 550
N I +
Sbjct: 742 LNAAIAK 748
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 100 KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANS 159
+RL+L L SL + + V FT F AGL+++L+ ++ + P +S P +
Sbjct: 623 QRLFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFVCPTSSDPLRT 682
Query: 160 ERYIVCKWKRPDCDTIRDFMFKLNKRLDR-YGSTSKRDIVSCVPLDIMKSDANFFDYLVT 218
++C + + + ++ +N+ L S S + ++ VP++++ A D+L
Sbjct: 683 CAVLLCVGYQDLPNPVFRYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGA-LLDFLWD 741
Query: 219 SNNTV 223
N +
Sbjct: 742 LNAAI 746
>sp|Q7ZVS8|FTSJ1_DANRE FtsJ methyltransferase domain-containing protein 1 OS=Danio rerio
GN=ftsjd1 PE=2 SV=1
Length = 743
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 371 YYGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLC 430
++G GD+ +++L L FV + R V + ADG F +G QE L L C
Sbjct: 205 FFGSDNTGDIMLQKHLLELPRFV---SNMRSVDLVTADGSFDCQGDPGEQERLVAPLQHC 261
Query: 431 QFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+ + +L ++ G FV K+F +F S LLYLL ++ V IFKP TS+ NSE YIVC
Sbjct: 262 EAICALLLLGTGGSFVLKMFTLFEHSSVCLLYLLACCFRSVNIFKPGTSKSGNSELYIVC 321
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 52 NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL 111
GD+ +++L L FV S R V + ADG F +G QE L L C+ + +L
Sbjct: 211 TGDIMLQKHLLELPRFV---SNMRSVDLVTADGSFDCQGDPGEQERLVAPLQHCEAICAL 267
Query: 112 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
++ G FV K+F +F S LLYLL ++ V IFKP TS+ NSE YIVC
Sbjct: 268 LLLGTGGSFVLKMFTLFEHSSVCLLYLLACCFRSVNIFKPGTSKSGNSELYIVC 321
>sp|Q5RAY7|FTSJ1_PONAB FtsJ methyltransferase domain-containing protein 1 OS=Pongo abelii
GN=FTSJD1 PE=2 SV=1
Length = 769
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 371 YYGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLC 430
Y+G GD+ + + L F+ + VH + ADG F +G QE L L+ C
Sbjct: 201 YFGPDNTGDIMTLKFLTGLQNFI---SSMATVHLVTADGSFDCQGNPGEQEALVSSLHYC 257
Query: 431 QFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+ + +L + G FV K+F MF S L+YLL QV +FKP TS+ NSE Y+VC
Sbjct: 258 EVVTALTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCLDQVHVFKPATSKAGNSEVYVVC 317
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
GD+ + + L F+ S VH + ADG F +G QE L L+ C+ + +
Sbjct: 206 NTGDIMTLKFLTGLQNFI---SSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
L + G FV K+F MF S L+YLL QV +FKP TS+ NSE Y+VC
Sbjct: 263 LTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCLDQVHVFKPATSKAGNSEVYVVC 317
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 425 KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANS 484
+RL+L L SL + + V FT F AGL+++L+ ++ + F P +S P +
Sbjct: 623 QRLFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFFCPTSSDPLRT 682
Query: 485 ERYIVCKWKRPDCDTIRDFMFKLNKRLDR-YGSTSKRDIVSCVPLDIMKSDANFFDYLVT 543
++C + + + ++ +N+ L S S + ++ VP++++ A D+L
Sbjct: 683 CAVLLCVGYQDLPNPVFQYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGA-LLDFLWD 741
Query: 544 SNNVINRIAGLGKH---AIYRYREDSN 567
N I + +H I R RE+ N
Sbjct: 742 LNAAIAK-----RHLHFIIQREREEIN 763
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 100 KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANS 159
+RL+L L SL + + V FT F AGL+++L+ ++ + F P +S P +
Sbjct: 623 QRLFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFFCPTSSDPLRT 682
Query: 160 ERYIVCKWKRPDCDTIRDFMFKLNKRLDR-YGSTSKRDIVSCVPLDIMKSDANFFDYLVT 218
++C + + + ++ +N+ L S S + ++ VP++++ A D+L
Sbjct: 683 CAVLLCVGYQDLPNPVFQYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGA-LLDFLWD 741
Query: 219 SNNTV 223
N +
Sbjct: 742 LNAAI 746
>sp|Q9UAS6|FTSJ1_DROME FtsJ methyltransferase domain-containing protein 1 homolog
OS=Drosophila melanogaster GN=aft PE=2 SV=1
Length = 700
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 323 VCAGPGGFS---EYVLYRK--------KWRAKGIGFTLTGSHDFKL--DDFFAGPSETFE 369
+C PG F + L+ K +WR+ + G+ ++ DD F T +
Sbjct: 138 LCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNPYYEGNAINQMISDDRFI--VHTLD 195
Query: 370 PYYGVKG-NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLY 428
++ K G++ D NI L E +G+ V + ADG Q + QE + RL+
Sbjct: 196 NWFFHKDLTGNLLDVANIDHLVERCEVEFQGQ-VDLVTADGSIDCAAQPDCQEEIVVRLF 254
Query: 429 LCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYI 488
+ L +L I+ G+F+ K+F +F S LLY L +++V IFKP TS+ NSE Y+
Sbjct: 255 FAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYV 314
Query: 489 VC 490
+C
Sbjct: 315 IC 316
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 52 NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL 111
G++ D NI L E +G+ V + ADG Q + QE + RL+ + L +L
Sbjct: 204 TGNLLDVANIDHLVERCEVEFQGQ-VDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSAL 262
Query: 112 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
I+ G+F+ K+F +F S LLY L +++V IFKP TS+ NSE Y++C
Sbjct: 263 RILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVIC 316
>sp|P0C968|VF424_ASFK5 Probable methyltransferase EP424R OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=Ken-067 PE=3 SV=1
Length = 424
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 376 GNGDVYDPENILSLHEFVMKST-KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
NGDV N+ +L +K+T K +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNL---ALKATQKLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALT 254
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
L + G+ + K + + F+ L+ + ++++ I KP +SRP+NSE YIV K
Sbjct: 255 GLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPSNSETYIVGK--- 311
Query: 495 PDCDTIRDFMFK----LNKRLDRYGSTSKRDI 522
+ +R F K L KRL+ + T D+
Sbjct: 312 ---NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
NGDV N+ +L + + K +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNLA--LKATQKLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALTG 255
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170
L + G+ + K + + F+ L+ + ++++ I KP +SRP+NSE YIV K
Sbjct: 256 LLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPSNSETYIVGK---- 311
Query: 171 DCDTIRDFMFK----LNKRLDRYGSTSKRDI 197
+ +R F K L KRL+ + T D+
Sbjct: 312 --NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
>sp|P0C967|VF424_ASFWA Probable methyltransferase EP424R OS=African swine fever virus
(isolate Warthog/Namibia/Wart80/1980) GN=War-065 PE=3
SV=1
Length = 424
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
NGDV N+ +L + + + +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNLA--LRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALTG 255
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 256 LLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK---- 311
Query: 171 DCDTIRDFMFK----LNKRLDRYGSTSKRDI 197
+ +R F K L KRL+ + T D+
Sbjct: 312 --NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 376 GNGDVYDPENILSLHEFVMKSTKG-RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
NGDV N+ +L +++T+ +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNL---ALRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALT 254
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 255 GLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK--- 311
Query: 495 PDCDTIRDFMFK----LNKRLDRYGSTSKRDI 522
+ +R F K L KRL+ + T D+
Sbjct: 312 ---NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
>sp|P0C969|VF424_ASFP4 Probable methyltransferase EP424R OS=African swine fever virus
(isolate Tick/South Africa/Pretoriuskop Pr4/1996)
GN=Pret-067 PE=3 SV=1
Length = 424
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
NGDV N+ +L + + + +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNLA--LRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALTG 255
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 256 LLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK---- 311
Query: 171 DCDTIRDFMFK----LNKRLDRYGSTSKRDI 197
+ +R F K L KRL+ + T D+
Sbjct: 312 --NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 376 GNGDVYDPENILSLHEFVMKSTKG-RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
NGDV N+ +L +++T+ +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNL---ALRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALT 254
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 255 GLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK--- 311
Query: 495 PDCDTIRDFMFK----LNKRLDRYGSTSKRDI 522
+ +R F K L KRL+ + T D+
Sbjct: 312 ---NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
>sp|P0C970|VF424_ASFM2 Probable methyltransferase EP424R OS=African swine fever virus
(isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-063 PE=3 SV=1
Length = 424
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS 110
NGDV N+ +L + + + +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNLA--LRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALTG 255
Query: 111 LFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 256 LLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK---- 311
Query: 171 DCDTIRDFMFK----LNKRLDRYGSTSKRDI 197
+ +R F K L KRL+ + T D+
Sbjct: 312 --NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 376 GNGDVYDPENILSLHEFVMKSTKG-RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
NGDV N+ +L +++T+ +H ADGG +V N QE L+ +L+ Q L
Sbjct: 198 NNGDVTIASNVKNL---ALRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALT 254
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 255 GLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK--- 311
Query: 495 PDCDTIRDFMFK----LNKRLDRYGSTSKRDI 522
+ +R F K L KRL+ + T D+
Sbjct: 312 ---NRLRLFTPKEEQVLLKRLEFFNDTPLVDL 340
>sp|Q65148|VF424_ASFB7 Probable methyltransferase EP424R OS=African swine fever virus
(strain Badajoz 1971 Vero-adapted) GN=Ba71V-055 PE=3
SV=1
Length = 424
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 38 SPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEI 97
SP L KNV +GDV N+ +L + + + +H ADGG +V N QE
Sbjct: 189 SPLLKKNV---DYNDGDVTIASNVKNLA--LRATQRLTPIHLYTADGGINVGHDYNKQEE 243
Query: 98 LSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPA 157
L+ +L+ Q L L + G+ + K + + F+ L+ + ++++ I KP +SRP
Sbjct: 244 LNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPT 303
Query: 158 NSERYIVCKWKRPDCDTIRDFMFK----LNKRLDRYGSTSKRDI 197
NSE YIV K + +R F K L KRL+ + T D+
Sbjct: 304 NSETYIVGK------NRLRLFTPKEEQILLKRLEFFNDTPLVDL 341
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 376 GNGDVYDPENILSLHEFVMKSTKG-RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
+GDV N+ +L +++T+ +H ADGG +V N QE L+ +L+ Q L
Sbjct: 199 NDGDVTIASNVKNL---ALRATQRLTPIHLYTADGGINVGHDYNKQEELNLKLHFGQALT 255
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
L + G+ + K + + F+ L+ + ++++ I KP +SRP NSE YIV K
Sbjct: 256 GLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSETYIVGK--- 312
Query: 495 PDCDTIRDFMFK----LNKRLDRYGSTSKRDI 522
+ +R F K L KRL+ + T D+
Sbjct: 313 ---NRLRLFTPKEEQILLKRLEFFNDTPLVDL 341
>sp|A5UKI5|RLME_METS3 Ribosomal RNA large subunit methyltransferase E
OS=Methanobrevibacter smithii (strain PS / ATCC 35061 /
DSM 861) GN=rlmE PE=3 SV=1
Length = 210
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 260 NMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLY 319
M+K+ + + + +E+ + +RA+ K+ +DK+ L+ G+ +
Sbjct: 6 QMEKKHDPYYKKAKKED----YRSRASYKIKQLDKKFK-------------LIKEGDTV- 47
Query: 320 FADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGD 379
D+ A PGG+S+ L + IG L F P E F +G++G+
Sbjct: 48 -VDLGAAPGGWSQVALEKVGEEGLVIGVDLNRIKPF--------PEENF---HGIRGDFT 95
Query: 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIV 439
+ + E VM G+ +++D S+ G +NI ++ S L ++ I+
Sbjct: 96 TTE------VQEKVMNLIGGKA-KVVISDASPSLCGIKNIDQLRSIDLTNTVIGIADNIL 148
Query: 440 RPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 489
P+G+ V KVF P +L L + Y+QV KP +SR +SE Y+V
Sbjct: 149 EPKGNLVMKVFQ--GPEYKDMLTRLKKKYRQVKTTKPPSSRKKSSEMYVV 196
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 64 LHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123
+ E VM G+ +++D S+ G +NI ++ S L ++ I+ P+G+ V K
Sbjct: 99 VQEKVMNLIGGKA-KVVISDASPSLCGIKNIDQLRSIDLTNTVIGIADNILEPKGNLVMK 157
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 164
VF P +L L + Y+QV KP +SR +SE Y+V
Sbjct: 158 VFQ--GPEYKDMLTRLKKKYRQVKTTKPPSSRKKSSEMYVV 196
>sp|O36015|TRM7_SCHPO Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC4F10.03c PE=3 SV=1
Length = 285
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 322 DVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDV 380
D+CA PG +S+ VL R+ K I ++ + A + P GV D+
Sbjct: 47 DLCAAPGSWSQ-VLSRELL--KNIDTSIAADEKPMI---VAVDLQPMAPIDGVCTLQLDI 100
Query: 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVR 440
P N LS+ ++ +++DG V G ++ E + ++ L F +++ +++
Sbjct: 101 THP-NTLSI---ILSHFGNEPADLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLK 156
Query: 441 PEGHFVCKVFDMFTPFSAGLLYLLYR-SYKQVCIFKPNTSRPANSERYIVCKWKRPDCDT 499
P G FV K+ F LLY R +++V KP +SR ++ E ++VC+ D +
Sbjct: 157 PGGKFVAKI---FRGRDVSLLYSQLRLMFRKVSCAKPRSSRASSIESFVVCE----DFNP 209
Query: 500 IRDFMFKLNKRLDRYGSTSKRDI---VSCVPLDIMKSDANF 537
+F L K L T+ +I ++C LD +DA +
Sbjct: 210 PSNFQPDLTKPLCVIDPTNAHEIAPFIACGDLDGYDADATY 250
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 79 FMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYL 138
+++DG V G ++ E + ++ L F +++ +++P G FV K+ F LLY
Sbjct: 120 LVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKI---FRGRDVSLLYS 176
Query: 139 LYR-SYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDRYGSTSKRDI 197
R +++V KP +SR ++ E ++VC+ D + +F L K L T+ +I
Sbjct: 177 QLRLMFRKVSCAKPRSSRASSIESFVVCE----DFNPPSNFQPDLTKPLCVIDPTNAHEI 232
Query: 198 ---VSCVPLDIMKSDANF 212
++C LD +DA +
Sbjct: 233 APFIACGDLDGYDADATY 250
>sp|Q22031|TRM7_CAEEL Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
OS=Caenorhabditis elegans GN=R74.7 PE=3 SV=3
Length = 337
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 322 DVCAGPGGFSEYV---LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGN 377
D+CA PG +S+ + LY + AK + L + P GV +
Sbjct: 47 DLCAAPGSWSQVLSKRLYEEDQEAKIVAIDL----------------QPMAPIPGVIQLQ 90
Query: 378 GDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 437
GD+ + V+K G ++ DG V G ++ E + L L F ++
Sbjct: 91 GDI----TSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSH 146
Query: 438 IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY-KQVCIFKPNTSRPANSERYIVC 490
+++ G+F+ K+ F ++ LLY + Y K+V + KP +SR ++ E +++C
Sbjct: 147 VLKEGGNFLAKI---FRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLC 197
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 68 VMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127
V+K G ++ DG V G ++ E + L L F ++ +++ G+F+ K+
Sbjct: 102 VIKHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKI--- 158
Query: 128 FTPFSAGLLYLLYRSY-KQVCIFKPNTSRPANSERYIVC 165
F ++ LLY + Y K+V + KP +SR ++ E +++C
Sbjct: 159 FRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLC 197
>sp|B3QFD2|RLME_RHOPT Ribosomal RNA large subunit methyltransferase E OS=Rhodopseudomonas
palustris (strain TIE-1) GN=rlmE PE=3 SV=1
Length = 237
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
++++LN + + +G + +RAA K+ +D + LL G +
Sbjct: 27 LERQLNDPYVAQAKRDG---YRSRAAYKLTEIDDKFR-------------LLKSG--MAV 68
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDV 380
D+ A PGG+S+ V +K A G G + L + P TF D
Sbjct: 69 VDLGAAPGGWSQ-VAAKKVGAADGRGKVVA----IDLLEMGEVPGVTFAQL-------DF 116
Query: 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVR 440
DP L E + G G +M+D + G ++ L + + +++
Sbjct: 117 LDPSAPERLREML-----GGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEVLK 171
Query: 441 PEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
P G F+ KVF + A L+ L R Y V KP SR +SERY++
Sbjct: 172 PGGTFLAKVFQ--SGADASLMTELKRDYASVKHVKPAASRKDSSERYLLA 219
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 54 DVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFI 113
D DP L E + G G +M+D + G ++ L + + +
Sbjct: 115 DFLDPSAPERLREML-----GGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEV 169
Query: 114 VRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
++P G F+ KVF + A L+ L R Y V KP SR +SERY++
Sbjct: 170 LKPGGTFLAKVFQ--SGADASLMTELKRDYASVKHVKPAASRKDSSERYLLA 219
>sp|Q6N7Q9|RLME_RHOPA Ribosomal RNA large subunit methyltransferase E OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=rlmE PE=3
SV=1
Length = 237
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
++++LN + + +G + +RAA K+ +D + LL G +
Sbjct: 27 LERQLNDPYVAQAKRDG---YRSRAAYKLTEIDDKFR-------------LLKSG--MAV 68
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDV 380
D+ A PGG+S+ V +K A G G + L + P TF D
Sbjct: 69 VDLGAAPGGWSQ-VAAKKVGAADGRGKVVA----IDLLEMGEVPGVTFAQL-------DF 116
Query: 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVR 440
DP L E + G G +M+D + G ++ L + + +++
Sbjct: 117 LDPSAPERLREML-----GGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEVLK 171
Query: 441 PEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
P G F+ KVF + A L+ L R Y V KP SR +SERY++
Sbjct: 172 PGGTFLAKVFQ--SGADASLMTELKRDYASVKHVKPAASRKDSSERYLLA 219
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 54 DVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFI 113
D DP L E + G G +M+D + G ++ L + + +
Sbjct: 115 DFLDPSAPERLREML-----GGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEV 169
Query: 114 VRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
++P G F+ KVF + A L+ L R Y V KP SR +SERY++
Sbjct: 170 LKPGGTFLAKVFQ--SGADASLMTELKRDYASVKHVKPAASRKDSSERYLLA 219
>sp|C3PMK3|RLME_RICAE Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
africae (strain ESF-5) GN=rlmE PE=3 SV=1
Length = 227
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R +G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARMDG---FRSRAAYKLLEIHEKFK-LFTPNMK--------------I 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S+ + L + D L++ + E GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ GR +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEADT----EELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LLY + R +K V FKP++SR ++E Y+V
Sbjct: 172 KVLKPSGHFIAKIFR--GGAENELLYKVKREFKTVKHFKPSSSRSESTEIYLVA 223
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 66 EFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVCK 123
E ++++ GR +M+D + G + I + L LC+ F +L +++P GHF+ K
Sbjct: 127 ELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIAK 183
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
+F LLY + R +K V FKP++SR ++E Y+V
Sbjct: 184 IFR--GGAENELLYKVKREFKTVKHFKPSSSRSESTEIYLVA 223
>sp|Q9VDD9|TRM72_DROME Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 2
OS=Drosophila melanogaster GN=CG7009 PE=3 SV=1
Length = 320
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 31/179 (17%)
Query: 322 DVCAGPGGFSEYVLYR--------KKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG 373
D+CA PG +S+ + R ++ + K I L G P G
Sbjct: 47 DLCAAPGSWSQVLAKRLYEPLPPEEREKVKIIAVDLQG----------------MAPIEG 90
Query: 374 VKG-NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQF 432
VK D+ ++ EF G +++DG G + + L L
Sbjct: 91 VKQLRADISKESTAEAIIEFF----GGEKAQIVVSDGAPDSTGMHDFDSYVQGELLLSAL 146
Query: 433 LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 491
+S FI+ G FV K++ ++ L L R +K VC+FKP+ SR ++ E ++V +
Sbjct: 147 SISTFILEEGGSFVSKIYR--ADRTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVVAR 203
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 63 SLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122
S E +++ G +++DG G + + L L +S FI+ G FV
Sbjct: 102 STAEAIIEFFGGEKAQIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVS 161
Query: 123 KVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 166
K++ ++ L L R +K VC+FKP+ SR ++ E ++V +
Sbjct: 162 KIYR--ADRTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVVAR 203
>sp|Q9UET6|TRM7_HUMAN Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
OS=Homo sapiens GN=FTSJ1 PE=1 SV=2
Length = 329
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 43/242 (17%)
Query: 256 MKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPG 315
M + DKR ++ + +ENG + R+A K+ +DK +F R
Sbjct: 1 MGRTSKDKR--DVYYRLAKENG---WRARSAFKLLQLDKEFQ-LFQGVTRA--------- 45
Query: 316 ELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV- 374
D+CA PG +S+ + +K +G G H +D + P GV
Sbjct: 46 -----VDLCAAPGSWSQ--VLSQKIGGQGSG------HVVAVD------LQAMAPLPGVV 86
Query: 375 KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV 434
+ GD+ LS + +++ KG ++ DG V G ++ E + +L L +
Sbjct: 87 QIQGDITQ----LSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNI 142
Query: 435 SLFIVRPEGHFVCKVFDMFTPFSAGLLY-LLYRSYKQVCIFKPNTSRPANSERYIVCKWK 493
+ +++P G FV K+ F LLY L + V KP +SR ++ E + VC+
Sbjct: 143 ATHVLKPGGCFVAKI---FRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGY 199
Query: 494 RP 495
P
Sbjct: 200 DP 201
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 49 VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL 108
V+ GD+ LS + +++ KG ++ DG V G ++ E + +L L
Sbjct: 86 VQIQGDITQ----LSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALN 141
Query: 109 VSLFIVRPEGHFVCKVFDMFTPFSAGLLY-LLYRSYKQVCIFKPNTSRPANSERYIVCKW 167
++ +++P G FV K+ F LLY L + V KP +SR ++ E + VC+
Sbjct: 142 IATHVLKPGGCFVAKI---FRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQG 198
Query: 168 KRP 170
P
Sbjct: 199 YDP 201
>sp|A1VQI6|RLME_POLNA Ribosomal RNA large subunit methyltransferase E OS=Polaromonas
naphthalenivorans (strain CJ2) GN=rlmE PE=3 SV=1
Length = 245
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 265 LNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVC 324
+N + + R+ G + RAA K+ MD+ L L+ PG+ + D+
Sbjct: 38 INDPYVKQARKEG---YRARAAFKLKEMDETLG-------------LIKPGDCVV--DLG 79
Query: 325 AGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVK-GNGDVYDP 383
+ PG +S+YV R+K G LD EP GV GD +P
Sbjct: 80 STPGAWSQYV--RRKLSPTGAAVGALNGRIIGLDLL------PMEPIEGVVFIQGDFREP 131
Query: 384 ENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVR--P 441
E + L + + V +++D ++ G E+ ++ +L + V R P
Sbjct: 132 EVLAKLEQALSTEKGPVKVDLVISDMAPNLSGIESADA--ARIAHLVELAVEFAQTRMKP 189
Query: 442 EGHFVCKVFDMFTPFSAG---LLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 491
+G V K+F +G L+ L S+K V KP SRP +SE ++V +
Sbjct: 190 DGALVVKLF-----HGSGYDDLVKLFQASFKVVKRMKPKASRPNSSETFLVGR 237
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 52 NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL 111
GD +PE + L + + V +++D ++ G E+ ++ +L + V
Sbjct: 125 QGDFREPEVLAKLEQALSTEKGPVKVDLVISDMAPNLSGIESADA--ARIAHLVELAVEF 182
Query: 112 FIVR--PEGHFVCKVFDMFTPFSAG---LLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 166
R P+G V K+F +G L+ L S+K V KP SRP +SE ++V +
Sbjct: 183 AQTRMKPDGALVVKLF-----HGSGYDDLVKLFQASFKVVKRMKPKASRPNSSETFLVGR 237
>sp|Q1QKB6|RLME_NITHX Ribosomal RNA large subunit methyltransferase E OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=rlmE PE=3 SV=1
Length = 228
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
++++LN + + +G + +RAA K+ MD + + L PG L
Sbjct: 27 LERQLNDPYVAQAKRDG---WRSRAAYKLIEMDDKYH-------------FLKPG--LAV 68
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDV 380
D+ A PGG+S+ R +G + G D P E + D
Sbjct: 69 VDLGAAPGGWSQVAARR-------VG-AVDGKGKVVAIDLLEMP-EIVGVTFARLDFLDA 119
Query: 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVR 440
PE ++++ E G +++D + G ++ L + ++R
Sbjct: 120 DAPEKLIAMMEG--------GADIVLSDMAANTTGHRKTDQLRIIGLVESAAAFAADVLR 171
Query: 441 PEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
P G F+ KVF + A LL L R ++ V KP +SR +SERY++
Sbjct: 172 PGGTFIAKVFQ--SGADADLLVQLKRDFRTVRHVKPASSRQDSSERYVMA 219
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 29 SIDNETKFCSPNLLK--NVLQCVKGNGDVYD---PENILSLHEFVMKSSKGRGVHFMMAD 83
++D + K + +LL+ ++ D D PE ++++ E G +++D
Sbjct: 88 AVDGKGKVVAIDLLEMPEIVGVTFARLDFLDADAPEKLIAMMEG--------GADIVLSD 139
Query: 84 GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 143
+ G ++ L + ++RP G F+ KVF + A LL L R +
Sbjct: 140 MAANTTGHRKTDQLRIIGLVESAAAFAADVLRPGGTFIAKVFQ--SGADADLLVQLKRDF 197
Query: 144 KQVCIFKPNTSRPANSERYIVC 165
+ V KP +SR +SERY++
Sbjct: 198 RTVRHVKPASSRQDSSERYVMA 219
>sp|Q92J64|RLME_RICCN Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=rlmE PE=3
SV=1
Length = 227
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R +G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARIDG---FRSRAAYKLLEIHEKFK-LFTPNMK--------------I 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S+ + L + D L++ + E GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ GR +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEADT----EELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 172 KVLKPSGHFIAKIFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 66 EFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVCK 123
E ++++ GR +M+D + G + I + L LC+ F +L +++P GHF+ K
Sbjct: 127 ELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIAK 183
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 184 IFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
>sp|A8GQZ0|RLME_RICRS Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
rickettsii (strain Sheila Smith) GN=rlmE PE=3 SV=1
Length = 227
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R +G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARIDG---FRSRAAYKLLEIHEKFK-LFTPNMK--------------V 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S+ + L + D L++ + E GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ GR +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEADT----EELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 172 KVLKPSGHFIAKIFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 66 EFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVCK 123
E ++++ GR +M+D + G + I + L LC+ F +L +++P GHF+ K
Sbjct: 127 ELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIAK 183
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 184 IFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
>sp|B0BWD8|RLME_RICRO Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
rickettsii (strain Iowa) GN=rlmE PE=3 SV=1
Length = 227
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R +G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARIDG---FRSRAAYKLLEIHEKFK-LFTPNMK--------------V 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S+ + L + D L++ + E GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ GR +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEADT----EELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 172 KVLKPSGHFIAKIFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 66 EFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVCK 123
E ++++ GR +M+D + G + I + L LC+ F +L +++P GHF+ K
Sbjct: 127 ELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIAK 183
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 184 IFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
>sp|C4K0Q4|RLME_RICPU Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
peacockii (strain Rustic) GN=rlmE PE=3 SV=1
Length = 227
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R +G F +RAA K+ + ++ L P +
Sbjct: 29 LRRQLNDPYVAKARIDG---FRSRAAYKLLEIHEKF-------------KLFIPN--MKI 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S+ + L + D L++ + E GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ GR +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEADT----EELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 172 KVLKPSGHFIAKIFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 66 EFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVCK 123
E ++++ GR +M+D + G + I + L LC+ F +L +++P GHF+ K
Sbjct: 127 ELIIQALDGRA-DIVMSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIAK 183
Query: 124 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
+F LL+ + R +K V FKP++SR ++E Y+V
Sbjct: 184 IFR--GGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVA 223
>sp|Q31HG6|RLME_THICR Ribosomal RNA large subunit methyltransferase E OS=Thiomicrospira
crunogena (strain XCL-2) GN=rlmE PE=3 SV=1
Length = 206
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 322 DVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHD--FKLDDFFAGPSETFEPYYGVK-GNG 378
D+ A PGG+S++ ++ TG F LD EP+ GV G
Sbjct: 54 DLGAAPGGWSQWTTHQ------------TGDEGRVFALDIL------PVEPFAGVTFIQG 95
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF- 437
D + + +++ ++ + GR V +M+D ++ G + + + + +YL + V L
Sbjct: 96 DFQEDD----VYQSLLDALDGREVDLVMSDMAPNMTGNKGVD--IPRAMYLVELCVDLAD 149
Query: 438 -IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 494
+++P G + KVF LL L Y++V KP SRP + E Y++ + K+
Sbjct: 150 QVLKPNGDLLMKVFQ--GEGYDQLLKSLREKYQKVLTRKPKASRPRSKEIYLLARGKK 205
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 64 LHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF--IVRPEGHFV 121
+++ ++ + GR V +M+D ++ G + + + + +YL + V L +++P G +
Sbjct: 102 VYQSLLDALDGREVDLVMSDMAPNMTGNKGVD--IPRAMYLVELCVDLADQVLKPNGDLL 159
Query: 122 CKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 169
KVF LL L Y++V KP SRP + E Y++ + K+
Sbjct: 160 MKVFQ--GEGYDQLLKSLREKYQKVLTRKPKASRPRSKEIYLLARGKK 205
>sp|Q4FMX1|RLME_PELUB Ribosomal RNA large subunit methyltransferase E OS=Pelagibacter
ubique (strain HTCC1062) GN=rlmE PE=3 SV=1
Length = 203
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 273 VRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSE 332
VR++ + R+A K+ +D++ + +NG ++ D+ A PG +S+
Sbjct: 20 VRQSQVDGYRARSAYKLIEIDEKF------KIFKNGISVI---------DLGASPGSWSQ 64
Query: 333 YVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGN-GDVYDPENILSLHE 391
Y+ R + + L G E E +KG+ D+ E I +L +
Sbjct: 65 YI-SRTVKSGRLVSIDLKGM-------------EEIENTIQIKGDFTDLESQEKIKALFK 110
Query: 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451
V +++D + G ++I I + L + S ++ EG FV K+F
Sbjct: 111 --------SKVDVVVSDMAVNTTGIKDIDAIYTGELAMEAMNFSKEMLVKEGRFVSKIF- 161
Query: 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 491
+ + F+ ++ L + +K+V +FKP +SR + E +I+CK
Sbjct: 162 LGSSFNE-IVALGKKLFKEVKVFKPKSSRKESKESFIICK 200
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 42 LKNVLQCVKGN-GDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSK 100
++N +Q +KG+ D+ E I +L + V +++D + G ++I I +
Sbjct: 86 IENTIQ-IKGDFTDLESQEKIKALFK--------SKVDVVVSDMAVNTTGIKDIDAIYTG 136
Query: 101 RLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSE 160
L + S ++ EG FV K+F + + F+ ++ L + +K+V +FKP +SR + E
Sbjct: 137 ELAMEAMNFSKEMLVKEGRFVSKIF-LGSSFNE-IVALGKKLFKEVKVFKPKSSRKESKE 194
Query: 161 RYIVCK 166
+I+CK
Sbjct: 195 SFIICK 200
>sp|A1W8H0|RLME_ACISJ Ribosomal RNA large subunit methyltransferase E OS=Acidovorax sp.
(strain JS42) GN=rlmE PE=3 SV=2
Length = 220
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 259 ANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELL 318
A + +N + + ++ G + RAA K+ +D++L L+ PG ++
Sbjct: 13 AWLHDHVNDTYVKLAQKEG---YRARAAYKLKEIDEQLG-------------LIKPGHVV 56
Query: 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVK-GN 377
D+ + PG +S+YV R++ G LD EP GV
Sbjct: 57 --VDLGSSPGAWSQYV--RRRLSPDGAAVGQLNGVIIALDIL------PMEPIEGVTFLQ 106
Query: 378 GDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 437
GD + E + L E V + R V +++D ++ G E++ + L ++
Sbjct: 107 GDFREEEVLAGLQEAV----QARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVH 162
Query: 438 IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 489
++PEG V K+F + +S L+ L +++ V KP SR +SE ++V
Sbjct: 163 HLKPEGALVVKLFH-GSGYSQ-LVQLFKDTFRVVKPMKPKASRDKSSETFLV 212
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 52 NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL 111
GD + E + L E V + R V +++D ++ G E++ + L ++
Sbjct: 106 QGDFREEEVLAGLQEAV----QARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAV 161
Query: 112 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 164
++PEG V K+F + +S L+ L +++ V KP SR +SE ++V
Sbjct: 162 HHLKPEGALVVKLFH-GSGYSQ-LVQLFKDTFRVVKPMKPKASRDKSSETFLV 212
>sp|A2SF90|RLME_METPP Ribosomal RNA large subunit methyltransferase E OS=Methylibium
petroleiphilum (strain PM1) GN=rlmE PE=3 SV=1
Length = 224
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 49/250 (19%)
Query: 256 MKMANMDKRLNSMFTQPVRENGNGPFLN---------RAAMKMANMDKRLNSMFTQPVRE 306
MK+ K++N + + ++ N P++ RAA K+ +D+ L
Sbjct: 1 MKVKTKSKKVNKAW---LNDHINDPYVKLAQKEGYRARAAYKLKEIDEALG--------- 48
Query: 307 NGSPLLGPGELLYFADVCAGPGGFSEYVLYR---KKWRAKGIGFTLTGSHDFKLDDFFAG 363
L+ PG+++ D+ A PG +S+Y+ R K+ G LD
Sbjct: 49 ----LIKPGQVV--VDLGAAPGAWSQYLRRRFAPKEAGTGGAAAGALNGRIIALDLL--- 99
Query: 364 PSETFEPYYGVK-GNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEI 422
FEP GV+ GD +D + L + GRGV +++D ++ G I
Sbjct: 100 ---DFEPIEGVQFIQGDFHDEAVLAELSA----AIGGRGVDVVVSDMAPNLSG---IASS 149
Query: 423 LSKRLYLCQFLVSLFI---VRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTS 479
S R+ L L F + P G VCKVF + L+ L + ++ V KP S
Sbjct: 150 DSARIALLVELAVEFAETHLHPHGALVCKVF--HGSGHSQLVELFKKRFRVVKPIKPKAS 207
Query: 480 RPANSERYIV 489
R +SE ++V
Sbjct: 208 RDKSSETFLV 217
>sp|Q983F8|RLME_RHILO Ribosomal RNA large subunit methyltransferase E OS=Rhizobium loti
(strain MAFF303099) GN=rlmE PE=3 SV=1
Length = 265
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 41/233 (17%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ + +N + Q + +G + +RAA K+ +D + + LL PG +
Sbjct: 34 LQRHINDPYVQRSKADG---YRSRAAYKLIEIDDKHH-------------LLKPG--MKV 75
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDV 380
D+ A PGG+ + R K A+ + G ++D P D
Sbjct: 76 IDLGAAPGGWCQVAAARTKSTAENP--HVVGIDYLEMDAVPGAPVLLM----------DF 123
Query: 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV--SLFI 438
DP+ L E + G +++D G + I + ++LC+ +L +
Sbjct: 124 LDPDAPQKLAEAL-----GGNPDVVLSDMAAPTTGHKRTDHI--RTMHLCEVAADFALSV 176
Query: 439 VRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 491
++P GHF+ K F LL +L ++++ V KP SR + E Y++ K
Sbjct: 177 LKPGGHFLAKTFQGGAENE--LLSMLKKNFRSVHHVKPPASRDESVELYLLAK 227
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 54 DVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLV--SL 111
D DP+ L E + G +++D G + I + ++LC+ +L
Sbjct: 122 DFLDPDAPQKLAEAL-----GGNPDVVLSDMAAPTTGHKRTDHI--RTMHLCEVAADFAL 174
Query: 112 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 166
+++P GHF+ K F LL +L ++++ V KP SR + E Y++ K
Sbjct: 175 SVLKPGGHFLAKTFQGGAENE--LLSMLKKNFRSVHHVKPPASRDESVELYLLAK 227
>sp|Q58771|RLME_METJA Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rlmE PE=3
SV=1
Length = 245
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 281 FLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKW 340
+ +RA+ K+ ++++ N ++ PG+++ D+ PGG+ +
Sbjct: 26 YRSRASFKLMQLNEKFN-------------VIKPGKIVL--DLGCAPGGWMQ-------- 62
Query: 341 RAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTKGR 400
+ + G F + P + FE V GD EN+ + E + K
Sbjct: 63 ----VAREIVGDKGFVIG-IDLQPVKPFEYDNVVAIKGDFTLEENLNKIRELIPNDEKK- 116
Query: 401 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF--DMFTPFSA 458
V +++D ++ G +I S L ++ +++ G+FV KVF DM +
Sbjct: 117 -VDVVISDASPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDY-- 173
Query: 459 GLLYLLYRSYKQVCIFKPNTSRPANSERYIVCK 491
+ L+ + +++V I KP SR ++E Y++ K
Sbjct: 174 --VNLVKKYFEKVYITKPQASRKESAEVYVIAK 204
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 24 GDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMAD 83
GDK I + + P NV+ GD EN+ + E + K V +++D
Sbjct: 69 GDKGFVIGIDLQPVKPFEYDNVVAI---KGDFTLEENLNKIRELIPNDEKK--VDVVISD 123
Query: 84 GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF--DMFTPFSAGLLYLLYR 141
++ G +I S L ++ +++ G+FV KVF DM + + L+ +
Sbjct: 124 ASPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDY----VNLVKK 179
Query: 142 SYKQVCIFKPNTSRPANSERYIVCK 166
+++V I KP SR ++E Y++ K
Sbjct: 180 YFEKVYITKPQASRKESAEVYVIAK 204
>sp|A8GMD3|RLME_RICAH Ribosomal RNA large subunit methyltransferase E OS=Rickettsia akari
(strain Hartford) GN=rlmE PE=3 SV=1
Length = 227
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARIEG---FRSRAAYKLLEIHEKF-KLFTPNMK--------------I 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVKGNGD 379
D+ A PGG+S+ + L + D L++ + EP GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKASDNSLNNKIISIDLLEIEPIIGVEFLQK 118
Query: 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLF 437
+ EN E +++ G+ +M+D + G + I + L LC+ F +L
Sbjct: 119 DFFEENT---EELIIQVLDGKA-DIVMSDMASNTTGHKATDHI--RTLLLCEQAFEFALK 172
Query: 438 IVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
+++P GHF+ K+F LL + +K V FKP++SR ++E Y+V
Sbjct: 173 VLKPSGHFIAKIFR--GGAENELLNKVKCEFKTVKHFKPSSSRSESTEIYLVA 223
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 65 HEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVC 122
E +++ G+ +M+D + G + I + L LC+ F +L +++P GHF+
Sbjct: 126 EELIIQVLDGKA-DIVMSDMASNTTGHKATDHI--RTLLLCEQAFEFALKVLKPSGHFIA 182
Query: 123 KVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
K+F LL + +K V FKP++SR ++E Y+V
Sbjct: 183 KIFR--GGAENELLNKVKCEFKTVKHFKPSSSRSESTEIYLVA 223
>sp|Q1RHG3|RLME_RICBR Ribosomal RNA large subunit methyltransferase E OS=Rickettsia
bellii (strain RML369-C) GN=rlmE PE=3 SV=1
Length = 227
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 261 MDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYF 320
+ ++LN + R G F +RAA K+ + ++ +FT ++
Sbjct: 29 LRRQLNDPYVAKARIEG---FRSRAAYKLLEIHEKFK-IFTPNMK--------------V 70
Query: 321 ADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD-FFAGPSETFEPYYGVKG-NG 378
D+ A PGG+S+ + L + D L + + EP GV+
Sbjct: 71 VDLGAAPGGWSQ------------VASKLIKATDGNLKNKIISVDLLEIEPIPGVESFQK 118
Query: 379 DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSL 436
D ++ + E ++++ KG+ +++D + G + I + L LC+ F +L
Sbjct: 119 DFFEKDT----EELIIQALKGKA-DIVLSDMASNTIGHKATDHI--RTLLLCEQAFEFAL 171
Query: 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490
++ P GHF+ K+F LL + R + V FKP++SR ++E Y+V
Sbjct: 172 KVLNPSGHFIAKIFR--GGAENELLNKVKREFSTVKHFKPSSSRKESTEIYLVA 223
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 65 HEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ--FLVSLFIVRPEGHFVC 122
E ++++ KG+ +++D + G + I + L LC+ F +L ++ P GHF+
Sbjct: 126 EELIIQALKGKA-DIVLSDMASNTIGHKATDHI--RTLLLCEQAFEFALKVLNPSGHFIA 182
Query: 123 KVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165
K+F LL + R + V FKP++SR ++E Y+V
Sbjct: 183 KIFR--GGAENELLNKVKREFSTVKHFKPSSSRKESTEIYLVA 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,480,321
Number of Sequences: 539616
Number of extensions: 10836701
Number of successful extensions: 21467
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 21004
Number of HSP's gapped (non-prelim): 502
length of query: 621
length of database: 191,569,459
effective HSP length: 124
effective length of query: 497
effective length of database: 124,657,075
effective search space: 61954566275
effective search space used: 61954566275
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)