Query psy13508
Match_columns 621
No_of_seqs 515 out of 2493
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 21:09:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2px2_A Genome polyprotein [con 100.0 3.8E-37 1.3E-41 308.8 12.9 213 217-495 9-228 (269)
2 3dou_A Ribosomal RNA large sub 100.0 5E-36 1.7E-40 292.8 19.1 182 278-496 2-184 (191)
3 3eld_A Methyltransferase; flav 100.0 9.1E-36 3.1E-40 305.1 18.8 233 216-513 16-254 (300)
4 3gcz_A Polyprotein; flavivirus 100.0 7.8E-36 2.7E-40 304.0 16.0 230 216-511 26-262 (282)
5 3evf_A RNA-directed RNA polyme 100.0 2.7E-34 9.4E-39 292.3 18.1 233 216-511 9-245 (277)
6 3p8z_A Mtase, non-structural p 100.0 5.1E-28 1.7E-32 238.8 19.5 207 217-490 15-226 (267)
7 2plw_A Ribosomal RNA methyltra 99.9 2.1E-26 7.1E-31 223.3 19.3 181 280-497 1-200 (201)
8 3lkz_A Non-structural protein 99.9 2.5E-26 8.4E-31 233.8 18.6 213 217-490 30-244 (321)
9 2nyu_A Putative ribosomal RNA 99.9 5.5E-25 1.9E-29 212.1 18.2 185 280-501 1-195 (196)
10 2oxt_A Nucleoside-2'-O-methylt 99.9 1.7E-24 6E-29 221.9 15.6 227 216-507 9-242 (265)
11 2px2_A Genome polyprotein [con 99.9 4.3E-25 1.5E-29 221.6 9.7 131 19-169 86-227 (269)
12 2p41_A Type II methyltransfera 99.9 7E-24 2.4E-28 221.7 17.8 219 217-504 19-245 (305)
13 3r24_A NSP16, 2'-O-methyl tran 99.9 3.4E-24 1.2E-28 217.3 10.0 163 312-514 107-279 (344)
14 2wa2_A Non-structural protein 99.9 8.3E-23 2.9E-27 210.7 15.7 229 219-512 20-255 (276)
15 3dou_A Ribosomal RNA large sub 99.9 1.5E-22 5.2E-27 197.3 12.7 145 19-170 38-183 (191)
16 3gcz_A Polyprotein; flavivirus 99.9 7.2E-22 2.4E-26 201.3 10.9 92 73-170 153-246 (282)
17 3eld_A Methyltransferase; flav 99.9 3.2E-22 1.1E-26 205.0 8.3 107 73-187 144-253 (300)
18 3evf_A RNA-directed RNA polyme 99.9 1.2E-21 4E-26 199.5 10.5 133 19-170 87-229 (277)
19 3r24_A NSP16, 2'-O-methyl tran 99.8 3E-22 1E-26 203.2 5.4 131 22-170 129-259 (344)
20 1ej0_A FTSJ; methyltransferase 99.8 4E-19 1.4E-23 166.0 20.8 179 280-495 1-180 (180)
21 2hwk_A Helicase NSP2; rossman 99.8 2.2E-19 7.4E-24 180.8 7.2 110 44-170 185-299 (320)
22 2hwk_A Helicase NSP2; rossman 99.7 2.2E-18 7.6E-23 173.5 9.5 114 368-498 184-302 (320)
23 3p8z_A Mtase, non-structural p 99.6 2.3E-15 7.9E-20 148.9 10.3 126 18-166 90-227 (267)
24 2xyq_A Putative 2'-O-methyl tr 99.6 3.5E-15 1.2E-19 154.7 9.7 145 312-496 61-214 (290)
25 4auk_A Ribosomal RNA large sub 99.6 1.5E-17 5.1E-22 176.5 -8.3 108 274-416 177-285 (375)
26 2plw_A Ribosomal RNA methyltra 99.5 1.5E-13 5.1E-18 132.6 13.2 146 19-170 35-198 (201)
27 3lkz_A Non-structural protein 99.5 1.7E-13 5.9E-18 139.7 11.3 127 18-166 106-245 (321)
28 2nyu_A Putative ribosomal RNA 99.4 4E-13 1.4E-17 128.9 11.9 146 19-170 35-189 (196)
29 2p41_A Type II methyltransfera 99.4 6.5E-13 2.2E-17 138.6 13.4 136 19-179 95-245 (305)
30 2oxt_A Nucleoside-2'-O-methylt 99.4 2E-12 6.8E-17 132.3 12.1 127 19-170 87-230 (265)
31 2wa2_A Non-structural protein 99.3 6.3E-12 2.1E-16 129.4 11.5 144 19-187 95-255 (276)
32 2xyq_A Putative 2'-O-methyl tr 99.0 1.4E-10 4.8E-15 120.1 5.4 128 22-170 83-213 (290)
33 1ej0_A FTSJ; methyltransferase 99.0 3.7E-09 1.2E-13 98.0 13.5 145 19-170 35-180 (180)
34 3hp7_A Hemolysin, putative; st 98.9 6E-10 2.1E-14 115.3 5.7 202 237-492 21-249 (291)
35 3id6_C Fibrillarin-like rRNA/T 98.9 1.3E-08 4.5E-13 102.0 12.4 167 279-492 55-230 (232)
36 3lpm_A Putative methyltransfer 98.4 1.6E-07 5.3E-12 94.7 5.7 158 314-495 49-219 (259)
37 3opn_A Putative hemolysin; str 98.3 3.8E-07 1.3E-11 91.1 6.2 56 279-351 15-70 (232)
38 3mti_A RRNA methylase; SAM-dep 98.3 5.4E-06 1.9E-10 78.3 12.8 155 312-491 20-183 (185)
39 4df3_A Fibrillarin-like rRNA/T 98.3 2E-07 6.9E-12 93.4 2.7 107 312-449 75-182 (233)
40 2ozv_A Hypothetical protein AT 98.3 6.7E-07 2.3E-11 90.5 6.1 165 319-495 39-213 (260)
41 3ajd_A Putative methyltransfer 98.3 5.8E-06 2E-10 84.2 12.7 136 313-466 82-229 (274)
42 2ipx_A RRNA 2'-O-methyltransfe 98.2 3.5E-07 1.2E-11 90.3 3.3 128 279-451 56-184 (233)
43 3m6w_A RRNA methylase; rRNA me 98.2 5.3E-06 1.8E-10 91.1 11.8 134 313-467 100-248 (464)
44 3m4x_A NOL1/NOP2/SUN family pr 98.2 7.9E-06 2.7E-10 89.6 13.0 134 313-467 104-253 (456)
45 1ixk_A Methyltransferase; open 98.2 1.6E-05 5.5E-10 82.7 13.7 132 313-466 117-264 (315)
46 1sqg_A SUN protein, FMU protei 98.1 1.2E-05 4.1E-10 87.2 12.9 134 313-467 245-393 (429)
47 2frx_A Hypothetical protein YE 98.1 1.7E-05 5.9E-10 87.4 13.6 133 314-467 117-265 (479)
48 4dzr_A Protein-(glutamine-N5) 98.1 4.3E-05 1.5E-09 73.0 14.5 155 319-496 33-208 (215)
49 3eey_A Putative rRNA methylase 98.1 4.5E-05 1.6E-09 72.6 14.3 158 313-494 21-189 (197)
50 1nt2_A Fibrillarin-like PRE-rR 98.1 3.2E-05 1.1E-09 75.7 13.2 148 312-493 55-210 (210)
51 3sso_A Methyltransferase; macr 98.1 6.7E-06 2.3E-10 88.4 8.6 101 319-451 219-326 (419)
52 2yxl_A PH0851 protein, 450AA l 98.0 2.7E-05 9.3E-10 85.0 13.3 140 313-472 258-415 (450)
53 2bm8_A Cephalosporin hydroxyla 98.0 2E-05 6.7E-10 78.6 10.6 126 319-478 84-221 (236)
54 4fzv_A Putative methyltransfer 98.0 2.1E-05 7.2E-10 83.6 11.2 138 312-466 146-302 (359)
55 2b9e_A NOL1/NOP2/SUN domain fa 98.0 0.0001 3.6E-09 76.6 15.7 135 313-467 101-253 (309)
56 1g8a_A Fibrillarin-like PRE-rR 97.9 2.1E-05 7.2E-10 76.9 8.3 106 313-449 72-178 (227)
57 3a27_A TYW2, uncharacterized p 97.9 3.7E-05 1.3E-09 78.2 10.0 144 313-494 118-268 (272)
58 3trk_A Nonstructural polyprote 97.9 5.1E-05 1.7E-09 76.0 10.3 97 400-498 210-307 (324)
59 4auk_A Ribosomal RNA large sub 97.9 8.1E-08 2.8E-12 102.0 -10.3 124 19-161 224-365 (375)
60 1dus_A MJ0882; hypothetical pr 97.8 0.0001 3.4E-09 69.1 11.0 126 313-475 51-181 (194)
61 3hm2_A Precorrin-6Y C5,15-meth 97.8 0.00016 5.5E-09 67.1 12.2 119 313-467 24-143 (178)
62 3evz_A Methyltransferase; NYSG 97.8 0.00023 7.8E-09 69.4 13.6 140 313-476 54-205 (230)
63 3e23_A Uncharacterized protein 97.8 3.5E-05 1.2E-09 74.2 7.4 148 313-498 42-205 (211)
64 3e8s_A Putative SAM dependent 97.7 0.00062 2.1E-08 65.4 15.7 140 319-492 55-226 (227)
65 3hem_A Cyclopropane-fatty-acyl 97.7 0.00023 7.8E-09 72.8 12.9 105 313-453 71-187 (302)
66 3h2b_A SAM-dependent methyltra 97.7 0.00038 1.3E-08 66.3 13.5 140 319-496 44-198 (203)
67 3cgg_A SAM-dependent methyltra 97.7 0.00057 2E-08 63.9 14.3 143 313-491 45-193 (195)
68 3dh0_A SAM dependent methyltra 97.7 0.00074 2.5E-08 65.0 15.3 144 313-493 36-193 (219)
69 1fbn_A MJ fibrillarin homologu 97.7 0.00014 4.8E-09 71.5 10.1 105 313-449 73-178 (230)
70 2b3t_A Protein methyltransfera 97.7 9.1E-05 3.1E-09 75.0 8.7 146 319-493 112-276 (276)
71 3mb5_A SAM-dependent methyltra 97.6 0.0003 1E-08 69.8 11.6 122 313-474 92-220 (255)
72 3ujc_A Phosphoethanolamine N-m 97.6 5.9E-05 2E-09 74.7 6.1 108 313-452 54-162 (266)
73 3gjy_A Spermidine synthase; AP 97.6 4.9E-05 1.7E-09 79.4 5.6 151 319-494 92-248 (317)
74 3r3h_A O-methyltransferase, SA 97.6 8.7E-05 3E-09 74.1 7.2 101 319-447 63-168 (242)
75 4gek_A TRNA (CMO5U34)-methyltr 97.6 0.00018 6.2E-09 72.8 9.4 108 312-451 68-180 (261)
76 3sm3_A SAM-dependent methyltra 97.6 0.00017 5.8E-09 69.9 8.8 111 313-450 29-142 (235)
77 4hg2_A Methyltransferase type 97.6 0.00018 6.1E-09 72.8 9.1 111 319-468 42-153 (257)
78 3ggd_A SAM-dependent methyltra 97.5 8.6E-05 2.9E-09 73.2 6.2 111 313-452 55-166 (245)
79 2frn_A Hypothetical protein PH 97.5 0.00026 8.9E-09 72.1 9.9 122 313-473 124-253 (278)
80 3q87_B N6 adenine specific DNA 97.5 0.00024 8E-09 66.7 8.8 130 319-495 26-164 (170)
81 3adn_A Spermidine synthase; am 97.5 0.00017 5.8E-09 74.4 8.4 153 319-493 86-245 (294)
82 4dmg_A Putative uncharacterize 97.5 0.00083 2.8E-08 72.1 14.0 129 313-468 213-344 (393)
83 3e05_A Precorrin-6Y C5,15-meth 97.5 0.00016 5.3E-09 69.4 7.5 124 313-475 39-166 (204)
84 3dli_A Methyltransferase; PSI- 97.5 7.1E-05 2.4E-09 73.7 5.1 104 313-452 40-143 (240)
85 2b25_A Hypothetical protein; s 97.5 0.00036 1.2E-08 72.7 10.6 124 313-466 104-234 (336)
86 2pwy_A TRNA (adenine-N(1)-)-me 97.5 0.0011 3.7E-08 65.5 13.5 121 313-472 95-220 (258)
87 3duw_A OMT, O-methyltransferas 97.5 8.6E-05 3E-09 72.2 5.3 101 319-448 61-166 (223)
88 3dtn_A Putative methyltransfer 97.5 6.2E-05 2.1E-09 73.5 4.1 104 319-452 47-151 (234)
89 3tfw_A Putative O-methyltransf 97.5 0.00058 2E-08 68.1 11.2 99 319-448 66-169 (248)
90 1yb2_A Hypothetical protein TA 97.5 0.0005 1.7E-08 69.5 10.7 123 313-475 109-236 (275)
91 1l3i_A Precorrin-6Y methyltran 97.4 0.00058 2E-08 63.7 10.4 124 313-478 32-161 (192)
92 3grz_A L11 mtase, ribosomal pr 97.4 0.00077 2.6E-08 64.5 11.4 122 313-475 59-184 (205)
93 3kkz_A Uncharacterized protein 97.4 0.00015 5.3E-09 72.5 6.7 103 313-451 45-152 (267)
94 1kpg_A CFA synthase;, cyclopro 97.4 0.001 3.5E-08 67.1 12.8 107 313-452 63-171 (287)
95 3p9n_A Possible methyltransfer 97.4 8.4E-05 2.9E-09 70.5 4.3 107 319-452 47-156 (189)
96 3njr_A Precorrin-6Y methylase; 97.4 0.00024 8.4E-09 68.8 7.5 113 313-467 54-170 (204)
97 2fk8_A Methoxy mycolic acid sy 97.4 0.0011 3.9E-08 67.9 12.9 109 313-454 89-199 (318)
98 3fpf_A Mtnas, putative unchara 97.4 0.0009 3.1E-08 69.2 11.9 128 312-478 120-252 (298)
99 3g5t_A Trans-aconitate 3-methy 97.4 9.1E-05 3.1E-09 75.6 4.5 107 319-450 39-150 (299)
100 3hnr_A Probable methyltransfer 97.4 0.00013 4.4E-09 70.4 5.3 99 319-451 48-147 (220)
101 3i9f_A Putative type 11 methyl 97.4 0.00013 4.4E-09 67.6 5.1 122 313-476 16-148 (170)
102 3ou2_A SAM-dependent methyltra 97.4 0.00015 5.2E-09 69.5 5.7 104 313-452 45-149 (218)
103 2ih2_A Modification methylase 97.4 0.0025 8.4E-08 68.0 15.7 147 319-493 42-210 (421)
104 4fsd_A Arsenic methyltransfera 97.4 6.8E-05 2.3E-09 79.9 3.5 113 313-451 82-205 (383)
105 2ex4_A Adrenal gland protein A 97.4 0.0016 5.6E-08 63.9 13.2 128 319-477 82-226 (241)
106 2zfu_A Nucleomethylin, cerebra 97.4 0.0014 4.8E-08 63.0 12.4 107 319-474 70-177 (215)
107 1i1n_A Protein-L-isoaspartate 97.4 0.00059 2E-08 66.3 9.5 102 313-452 76-185 (226)
108 3g5l_A Putative S-adenosylmeth 97.3 0.00031 1.1E-08 69.4 7.4 99 319-450 47-146 (253)
109 4gua_A Non-structural polyprot 97.3 0.00052 1.8E-08 75.2 9.5 94 400-495 220-314 (670)
110 3ofk_A Nodulation protein S; N 97.3 0.0003 1E-08 67.7 7.0 126 319-476 54-188 (216)
111 3d2l_A SAM-dependent methyltra 97.3 0.0033 1.1E-07 61.2 14.6 101 313-447 32-135 (243)
112 1xtp_A LMAJ004091AAA; SGPP, st 97.3 0.00073 2.5E-08 66.5 9.9 128 319-476 96-238 (254)
113 1i9g_A Hypothetical protein RV 97.3 0.0022 7.5E-08 64.4 13.6 123 313-474 98-228 (280)
114 1y8c_A S-adenosylmethionine-de 97.3 0.00044 1.5E-08 67.5 8.1 98 319-448 40-141 (246)
115 1pjz_A Thiopurine S-methyltran 97.3 0.0002 7E-09 69.1 5.5 110 313-450 21-141 (203)
116 2a14_A Indolethylamine N-methy 97.3 0.00095 3.3E-08 67.0 10.5 87 400-494 155-261 (263)
117 2p35_A Trans-aconitate 2-methy 97.3 0.00046 1.6E-08 68.2 8.0 100 319-453 36-136 (259)
118 3tr6_A O-methyltransferase; ce 97.3 0.0001 3.6E-09 71.6 3.3 101 319-447 67-172 (225)
119 3f4k_A Putative methyltransfer 97.3 0.00089 3E-08 66.1 10.0 102 313-450 45-151 (257)
120 3lcc_A Putative methyl chlorid 97.3 0.00062 2.1E-08 66.6 8.7 144 319-495 69-228 (235)
121 2as0_A Hypothetical protein PH 97.3 0.00053 1.8E-08 73.3 8.7 139 314-475 217-364 (396)
122 3gu3_A Methyltransferase; alph 97.3 8.6E-05 3E-09 75.4 2.4 101 319-451 25-128 (284)
123 3lbf_A Protein-L-isoaspartate 97.2 0.00096 3.3E-08 64.0 9.4 98 313-451 76-176 (210)
124 3l8d_A Methyltransferase; stru 97.2 0.00025 8.4E-09 69.4 5.2 105 313-453 52-157 (242)
125 2gb4_A Thiopurine S-methyltran 97.2 0.00052 1.8E-08 69.1 7.7 129 319-473 71-224 (252)
126 3bus_A REBM, methyltransferase 97.2 0.003 1E-07 62.9 13.3 105 313-452 60-169 (273)
127 2xvm_A Tellurite resistance pr 97.2 0.0036 1.2E-07 58.8 13.1 124 319-475 35-172 (199)
128 2esr_A Methyltransferase; stru 97.2 0.00023 8E-09 66.4 4.7 103 319-452 34-141 (177)
129 1o54_A SAM-dependent O-methylt 97.2 0.0015 5.2E-08 65.9 11.1 122 313-475 111-238 (277)
130 1jsx_A Glucose-inhibited divis 97.2 0.0037 1.3E-07 59.5 13.3 133 319-492 68-204 (207)
131 3jwh_A HEN1; methyltransferase 97.2 0.00024 8.1E-09 68.7 4.8 109 319-450 32-142 (217)
132 1inl_A Spermidine synthase; be 97.2 0.001 3.5E-08 68.4 9.7 149 319-493 93-252 (296)
133 2pxx_A Uncharacterized protein 97.2 0.00019 6.6E-09 68.5 4.0 115 313-452 41-162 (215)
134 3dr5_A Putative O-methyltransf 97.2 0.00092 3.1E-08 65.7 8.9 97 319-447 59-161 (221)
135 1xdz_A Methyltransferase GIDB; 97.2 0.0039 1.3E-07 61.4 13.3 32 319-351 73-104 (240)
136 1vl5_A Unknown conserved prote 97.2 0.00044 1.5E-08 68.8 6.4 105 313-452 36-143 (260)
137 1ri5_A MRNA capping enzyme; me 97.2 0.0014 4.8E-08 65.9 10.2 107 313-451 63-176 (298)
138 3jwg_A HEN1, methyltransferase 97.2 0.00025 8.7E-09 68.5 4.4 110 319-451 32-143 (219)
139 1sui_A Caffeoyl-COA O-methyltr 97.2 0.00036 1.2E-08 69.8 5.6 102 319-447 82-188 (247)
140 1dl5_A Protein-L-isoaspartate 97.1 0.0016 5.6E-08 67.3 10.5 99 313-449 74-175 (317)
141 2igt_A SAM dependent methyltra 97.1 0.00034 1.2E-08 73.4 5.3 129 319-468 156-291 (332)
142 3mgg_A Methyltransferase; NYSG 97.1 0.0022 7.4E-08 64.2 11.0 104 313-449 36-142 (276)
143 3iv6_A Putative Zn-dependent a 97.1 0.00049 1.7E-08 69.9 6.1 118 313-462 44-161 (261)
144 3bwc_A Spermidine synthase; SA 97.1 0.003 1E-07 65.2 12.2 149 319-493 98-258 (304)
145 3ege_A Putative methyltransfer 97.1 0.00089 3E-08 66.9 8.0 95 319-451 37-132 (261)
146 2ift_A Putative methylase HI07 97.1 0.00013 4.4E-09 70.4 1.7 103 319-451 56-165 (201)
147 3u81_A Catechol O-methyltransf 97.1 0.003 1E-07 61.4 11.5 121 319-467 61-186 (221)
148 1yzh_A TRNA (guanine-N(7)-)-me 97.1 0.00032 1.1E-08 67.9 4.5 133 319-475 44-181 (214)
149 3tma_A Methyltransferase; thum 97.1 0.0027 9.1E-08 66.6 11.9 114 313-451 202-319 (354)
150 3orh_A Guanidinoacetate N-meth 97.1 0.001 3.4E-08 65.9 8.2 107 313-447 59-168 (236)
151 3ccf_A Cyclopropane-fatty-acyl 97.1 0.00045 1.5E-08 69.6 5.6 97 319-452 60-157 (279)
152 2yxd_A Probable cobalt-precorr 97.1 0.0019 6.6E-08 59.6 9.6 120 319-481 38-161 (183)
153 2yvl_A TRMI protein, hypotheti 97.1 0.0021 7.3E-08 63.0 10.4 119 313-474 90-213 (248)
154 3bkx_A SAM-dependent methyltra 97.1 0.0035 1.2E-07 62.5 12.0 114 313-453 42-163 (275)
155 3c3y_A Pfomt, O-methyltransfer 97.1 0.00027 9.1E-09 70.1 3.7 102 319-447 73-179 (237)
156 1zx0_A Guanidinoacetate N-meth 97.1 0.0012 4.2E-08 64.7 8.5 104 319-448 63-169 (236)
157 3dmg_A Probable ribosomal RNA 97.1 0.00055 1.9E-08 73.2 6.3 122 319-474 236-360 (381)
158 2fhp_A Methylase, putative; al 97.1 0.002 6.7E-08 60.2 9.3 106 319-452 47-157 (187)
159 2avd_A Catechol-O-methyltransf 97.1 0.00027 9.1E-09 68.9 3.4 101 319-447 72-177 (229)
160 1ve3_A Hypothetical protein PH 97.0 0.00029 1E-08 68.1 3.5 102 319-451 41-144 (227)
161 4dcm_A Ribosomal RNA large sub 97.0 0.0028 9.7E-08 67.4 11.3 123 319-474 225-354 (375)
162 3pfg_A N-methyltransferase; N, 97.0 0.00028 9.6E-09 70.3 3.3 99 319-451 53-153 (263)
163 4htf_A S-adenosylmethionine-de 97.0 0.0037 1.3E-07 62.9 11.6 101 319-452 71-176 (285)
164 2yxe_A Protein-L-isoaspartate 97.0 0.0034 1.2E-07 60.2 10.6 101 313-451 76-179 (215)
165 1ws6_A Methyltransferase; stru 97.0 0.00025 8.7E-09 65.2 2.4 104 319-452 44-150 (171)
166 3g07_A 7SK snRNA methylphospha 97.0 0.00072 2.5E-08 69.1 5.9 32 319-351 49-80 (292)
167 2i7c_A Spermidine synthase; tr 97.0 0.00078 2.7E-08 68.9 6.1 152 319-492 81-238 (283)
168 1o9g_A RRNA methyltransferase; 97.0 0.00028 9.5E-09 70.1 2.6 33 319-351 54-87 (250)
169 2yqz_A Hypothetical protein TT 96.9 0.0004 1.4E-08 68.7 3.7 104 313-452 38-143 (263)
170 2pbf_A Protein-L-isoaspartate 96.9 0.0012 4.1E-08 64.2 7.0 105 313-451 79-195 (227)
171 3uwp_A Histone-lysine N-methyl 96.9 0.0055 1.9E-07 66.1 12.6 122 281-448 154-287 (438)
172 1nv8_A HEMK protein; class I a 96.9 0.00079 2.7E-08 68.9 5.9 31 319-351 126-156 (284)
173 3ntv_A MW1564 protein; rossman 96.9 0.0029 9.9E-08 62.2 9.8 96 319-447 74-174 (232)
174 1nkv_A Hypothetical protein YJ 96.9 0.00099 3.4E-08 65.7 6.3 101 313-449 35-140 (256)
175 3g89_A Ribosomal RNA small sub 96.9 0.0075 2.6E-07 60.3 12.8 139 319-494 83-229 (249)
176 1iy9_A Spermidine synthase; ro 96.9 0.0031 1E-07 64.2 10.0 146 319-493 78-236 (275)
177 2nxc_A L11 mtase, ribosomal pr 96.9 0.0052 1.8E-07 61.4 11.5 121 313-475 119-243 (254)
178 1mjf_A Spermidine synthase; sp 96.9 0.0063 2.2E-07 61.9 12.2 150 319-493 78-239 (281)
179 2pt6_A Spermidine synthase; tr 96.9 0.00099 3.4E-08 69.5 6.3 153 319-493 119-277 (321)
180 1wxx_A TT1595, hypothetical pr 96.9 0.00076 2.6E-08 71.8 5.5 113 319-452 212-328 (382)
181 3m70_A Tellurite resistance pr 96.9 0.0034 1.2E-07 63.3 10.1 99 319-450 123-224 (286)
182 2cmg_A Spermidine synthase; tr 96.9 0.0023 7.8E-08 64.8 8.6 132 319-493 75-216 (262)
183 2gpy_A O-methyltransferase; st 96.8 0.0033 1.1E-07 61.4 9.1 98 319-448 57-159 (233)
184 3ocj_A Putative exported prote 96.8 0.0016 5.4E-08 66.7 7.1 108 313-451 117-229 (305)
185 3lst_A CALO1 methyltransferase 96.8 0.0033 1.1E-07 65.7 9.6 100 319-451 187-288 (348)
186 1vbf_A 231AA long hypothetical 96.8 0.004 1.4E-07 60.5 9.6 97 313-451 69-167 (231)
187 1uir_A Polyamine aminopropyltr 96.8 0.0041 1.4E-07 64.5 10.0 147 319-492 80-241 (314)
188 3c3p_A Methyltransferase; NP_9 96.8 0.0046 1.6E-07 59.4 9.7 33 319-351 59-91 (210)
189 2b78_A Hypothetical protein SM 96.8 0.0012 4E-08 70.6 5.8 128 319-467 215-348 (385)
190 2p7i_A Hypothetical protein; p 96.8 0.00035 1.2E-08 68.1 1.6 98 319-452 45-144 (250)
191 2o57_A Putative sarcosine dime 96.8 0.0026 9E-08 64.3 8.2 105 313-451 81-189 (297)
192 1r18_A Protein-L-isoaspartate( 96.8 0.0037 1.3E-07 60.9 9.0 101 313-451 83-196 (227)
193 2gs9_A Hypothetical protein TT 96.8 0.00084 2.9E-08 64.3 4.1 97 319-453 39-136 (211)
194 2fca_A TRNA (guanine-N(7)-)-me 96.8 0.0011 3.8E-08 64.5 5.0 110 319-450 41-154 (213)
195 2hnk_A SAM-dependent O-methylt 96.8 0.00056 1.9E-08 67.4 2.9 33 319-351 63-95 (239)
196 3vc1_A Geranyl diphosphate 2-C 96.7 0.0017 5.9E-08 66.6 6.6 103 313-451 116-223 (312)
197 3bkw_A MLL3908 protein, S-aden 96.7 0.00072 2.5E-08 66.0 3.5 100 319-451 46-146 (243)
198 3cc8_A Putative methyltransfer 96.7 0.0017 6E-08 62.3 6.1 99 319-452 35-133 (230)
199 2yx1_A Hypothetical protein MJ 96.7 0.0038 1.3E-07 65.3 8.9 135 313-494 194-332 (336)
200 2o07_A Spermidine synthase; st 96.7 0.0075 2.6E-07 62.3 11.0 148 319-493 98-256 (304)
201 3q7e_A Protein arginine N-meth 96.7 0.00088 3E-08 70.5 3.9 99 319-446 69-170 (349)
202 2y1w_A Histone-arginine methyl 96.7 0.002 6.7E-08 67.7 6.4 102 319-449 53-155 (348)
203 1xxl_A YCGJ protein; structura 96.7 0.0054 1.9E-07 60.2 9.3 105 313-452 20-127 (239)
204 4e2x_A TCAB9; kijanose, tetron 96.6 0.0029 9.9E-08 67.6 7.7 103 313-449 106-208 (416)
205 1fp1_D Isoliquiritigenin 2'-O- 96.6 0.0053 1.8E-07 64.8 9.5 96 319-451 212-308 (372)
206 2i62_A Nicotinamide N-methyltr 96.6 0.0017 6E-08 64.1 5.4 31 319-351 59-89 (265)
207 1p91_A Ribosomal RNA large sub 96.6 0.0013 4.3E-08 65.7 4.4 93 319-452 88-181 (269)
208 3v97_A Ribosomal RNA large sub 96.6 0.00071 2.4E-08 77.9 2.8 112 319-451 542-659 (703)
209 2qe6_A Uncharacterized protein 96.6 0.0023 7.8E-08 65.0 6.2 116 319-452 80-199 (274)
210 3k6r_A Putative transferase PH 96.6 0.011 3.7E-07 60.5 11.3 100 312-450 123-226 (278)
211 3cbg_A O-methyltransferase; cy 96.6 0.00089 3E-08 66.0 3.1 100 319-448 75-181 (232)
212 3reo_A (ISO)eugenol O-methyltr 96.6 0.0083 2.8E-07 63.4 10.6 96 319-451 206-302 (368)
213 2pjd_A Ribosomal RNA small sub 96.6 0.0014 4.9E-08 68.5 4.7 122 319-474 199-323 (343)
214 3thr_A Glycine N-methyltransfe 96.6 0.0069 2.3E-07 61.0 9.5 113 319-451 60-177 (293)
215 2fpo_A Methylase YHHF; structu 96.6 0.0082 2.8E-07 57.6 9.6 102 319-451 57-162 (202)
216 2avn_A Ubiquinone/menaquinone 96.5 0.0011 3.6E-08 66.2 3.3 98 319-452 57-155 (260)
217 2fyt_A Protein arginine N-meth 96.5 0.0014 4.8E-08 68.7 4.3 100 319-446 67-168 (340)
218 3g2m_A PCZA361.24; SAM-depende 96.5 0.00067 2.3E-08 69.1 1.8 101 319-452 85-193 (299)
219 3bgv_A MRNA CAP guanine-N7 met 96.5 0.0088 3E-07 61.2 10.1 127 319-465 37-166 (313)
220 3mcz_A O-methyltransferase; ad 96.5 0.0018 6.2E-08 67.5 4.8 107 319-451 182-289 (352)
221 2vdw_A Vaccinia virus capping 96.5 0.0088 3E-07 61.6 9.9 118 319-451 51-171 (302)
222 3p9c_A Caffeic acid O-methyltr 96.5 0.011 3.8E-07 62.3 11.0 96 319-451 204-300 (364)
223 3dlc_A Putative S-adenosyl-L-m 96.5 0.0024 8.3E-08 60.8 5.1 99 319-449 46-148 (219)
224 3trk_A Nonstructural polyprote 96.5 0.0056 1.9E-07 61.5 7.7 89 75-168 210-302 (324)
225 2p8j_A S-adenosylmethionine-de 96.4 0.01 3.5E-07 56.3 9.4 104 319-452 26-131 (209)
226 3r0q_C Probable protein argini 96.4 0.0015 5E-08 69.5 3.7 101 319-448 66-168 (376)
227 2ip2_A Probable phenazine-spec 96.4 0.0057 1.9E-07 63.2 7.7 101 319-451 170-274 (334)
228 2vdv_E TRNA (guanine-N(7)-)-me 96.4 0.0021 7E-08 63.8 4.2 36 313-351 48-83 (246)
229 1jg1_A PIMT;, protein-L-isoasp 96.4 0.007 2.4E-07 59.3 8.0 99 313-452 90-192 (235)
230 1vlm_A SAM-dependent methyltra 96.4 0.0025 8.6E-08 61.7 4.7 91 319-451 50-141 (219)
231 1wzn_A SAM-dependent methyltra 96.4 0.017 5.7E-07 56.7 10.7 99 319-449 44-145 (252)
232 3bxo_A N,N-dimethyltransferase 96.3 0.0023 7.8E-08 62.2 4.0 100 319-452 43-144 (239)
233 3c0k_A UPF0064 protein YCCW; P 96.3 0.0023 8E-08 68.3 4.5 115 319-452 223-342 (396)
234 2f8l_A Hypothetical protein LM 96.3 0.002 7E-08 67.3 3.9 126 319-467 133-276 (344)
235 2b2c_A Spermidine synthase; be 96.3 0.0021 7.3E-08 66.8 3.7 153 319-493 111-269 (314)
236 3m33_A Uncharacterized protein 96.2 0.0042 1.4E-07 60.5 5.5 116 313-474 47-165 (226)
237 1xj5_A Spermidine synthase 1; 96.2 0.0024 8.2E-08 67.0 3.8 149 319-492 123-282 (334)
238 2kw5_A SLR1183 protein; struct 96.2 0.011 3.8E-07 55.9 8.2 100 319-452 32-134 (202)
239 1tw3_A COMT, carminomycin 4-O- 96.2 0.0035 1.2E-07 65.5 4.8 103 319-451 186-290 (360)
240 1g6q_1 HnRNP arginine N-methyl 96.2 0.0029 9.8E-08 65.9 4.0 99 319-446 41-142 (328)
241 3dxy_A TRNA (guanine-N(7)-)-me 96.1 0.019 6.5E-07 56.1 9.5 131 319-472 37-173 (218)
242 3ckk_A TRNA (guanine-N(7)-)-me 96.1 0.0048 1.7E-07 61.2 5.2 119 319-451 49-170 (235)
243 3bzb_A Uncharacterized protein 96.0 0.099 3.4E-06 52.8 14.5 31 319-351 82-113 (281)
244 3kr9_A SAM-dependent methyltra 95.9 0.021 7.1E-07 56.6 8.9 37 312-351 13-49 (225)
245 1wy7_A Hypothetical protein PH 95.9 0.025 8.6E-07 53.7 9.2 31 319-351 52-82 (207)
246 2g72_A Phenylethanolamine N-me 95.9 0.0083 2.8E-07 60.6 6.0 31 319-351 74-104 (289)
247 2aot_A HMT, histamine N-methyl 95.9 0.0029 9.8E-08 64.3 2.4 110 319-452 55-175 (292)
248 2qfm_A Spermine synthase; sper 95.8 0.02 7E-07 60.6 8.8 144 319-475 191-341 (364)
249 1u2z_A Histone-lysine N-methyl 95.8 0.021 7E-07 62.1 9.0 36 313-351 241-276 (433)
250 3gnl_A Uncharacterized protein 95.7 0.022 7.7E-07 57.1 8.2 116 312-467 19-139 (244)
251 1fp2_A Isoflavone O-methyltran 95.7 0.02 7E-07 59.7 8.3 96 319-451 191-290 (352)
252 3dp7_A SAM-dependent methyltra 95.7 0.0052 1.8E-07 64.7 3.7 106 319-450 182-288 (363)
253 3lec_A NADB-rossmann superfami 95.6 0.035 1.2E-06 55.1 8.9 115 312-467 19-139 (230)
254 1x19_A CRTF-related protein; m 95.5 0.095 3.3E-06 54.6 12.7 102 319-452 193-298 (359)
255 3gwz_A MMCR; methyltransferase 95.5 0.08 2.7E-06 55.7 12.1 103 319-451 205-309 (369)
256 3b3j_A Histone-arginine methyl 95.4 0.011 3.9E-07 64.9 5.2 100 319-447 161-261 (480)
257 3i53_A O-methyltransferase; CO 95.4 0.043 1.5E-06 56.6 9.1 103 319-451 172-276 (332)
258 4hc4_A Protein arginine N-meth 95.3 0.011 3.7E-07 63.1 4.5 98 319-446 86-186 (376)
259 4gua_A Non-structural polyprot 95.3 0.036 1.2E-06 60.9 8.3 88 75-167 220-311 (670)
260 1zg3_A Isoflavanone 4'-O-methy 95.3 0.038 1.3E-06 57.8 8.3 96 319-451 196-295 (358)
261 4a6d_A Hydroxyindole O-methylt 95.2 0.022 7.7E-07 59.7 6.4 32 319-351 182-213 (353)
262 1qzz_A RDMB, aclacinomycin-10- 94.8 0.12 4.2E-06 53.9 10.7 102 319-450 185-288 (374)
263 3giw_A Protein of unknown func 94.7 0.077 2.6E-06 54.2 8.5 118 319-452 81-203 (277)
264 3htx_A HEN1; HEN1, small RNA m 94.6 0.1 3.4E-06 60.8 10.1 109 319-450 724-835 (950)
265 3axs_A Probable N(2),N(2)-dime 94.5 0.0085 2.9E-07 64.3 0.9 33 319-351 55-87 (392)
266 1wg8_A Predicted S-adenosylmet 94.2 0.031 1.1E-06 57.1 4.2 79 313-412 21-100 (285)
267 2r3s_A Uncharacterized protein 94.1 0.23 7.8E-06 50.8 10.6 105 319-452 168-274 (335)
268 3id6_C Fibrillarin-like rRNA/T 93.8 0.066 2.3E-06 53.2 5.7 108 19-149 89-214 (232)
269 1m6y_A S-adenosyl-methyltransf 93.7 0.06 2.1E-06 55.5 5.3 36 313-351 25-60 (301)
270 1af7_A Chemotaxis receptor met 93.7 0.031 1.1E-06 56.9 3.1 34 318-351 107-147 (274)
271 3mq2_A 16S rRNA methyltransfer 93.7 0.048 1.6E-06 52.3 4.3 36 313-351 26-61 (218)
272 2dul_A N(2),N(2)-dimethylguano 93.5 0.022 7.4E-07 60.8 1.5 32 319-351 50-81 (378)
273 3p2e_A 16S rRNA methylase; met 93.4 0.061 2.1E-06 52.7 4.6 36 313-351 23-58 (225)
274 2okc_A Type I restriction enzy 92.6 0.068 2.3E-06 57.9 4.0 110 319-449 174-307 (445)
275 2qm3_A Predicted methyltransfe 92.5 0.81 2.8E-05 48.1 12.1 101 319-451 175-280 (373)
276 1yub_A Ermam, rRNA methyltrans 92.2 0.13 4.6E-06 50.6 5.3 78 313-414 28-106 (245)
277 3tm4_A TRNA (guanine N2-)-meth 91.8 1 3.4E-05 47.4 11.7 32 319-351 220-251 (373)
278 2ozv_A Hypothetical protein AT 91.8 0.21 7.1E-06 49.8 6.1 108 49-164 92-207 (260)
279 1ne2_A Hypothetical protein TA 91.3 0.27 9.2E-06 46.3 6.0 68 319-413 54-122 (200)
280 3tka_A Ribosomal RNA small sub 91.3 0.2 6.7E-06 52.5 5.4 37 313-351 56-92 (347)
281 3iyl_W VP1; non-enveloped viru 90.8 0.87 3E-05 54.0 10.5 93 398-495 571-664 (1299)
282 3gdh_A Trimethylguanosine synt 90.6 0.16 5.4E-06 49.4 3.8 30 319-351 81-110 (241)
283 2ar0_A M.ecoki, type I restric 90.3 0.49 1.7E-05 52.6 7.9 114 319-451 172-314 (541)
284 3sso_A Methyltransferase; macr 90.3 0.44 1.5E-05 51.2 7.1 87 20-126 237-326 (419)
285 1qam_A ERMC' methyltransferase 90.1 0.34 1.2E-05 47.9 5.8 34 313-351 29-62 (244)
286 1zq9_A Probable dimethyladenos 89.8 0.42 1.4E-05 48.4 6.3 34 313-351 27-60 (285)
287 3uzu_A Ribosomal RNA small sub 89.7 0.36 1.2E-05 49.0 5.7 37 313-351 41-78 (279)
288 3s1s_A Restriction endonucleas 89.5 0.67 2.3E-05 53.8 8.3 136 319-469 324-489 (878)
289 1ej6_A Lambda2; icosahedral, n 89.3 0.67 2.3E-05 54.6 7.9 91 397-495 566-660 (1289)
290 3lpm_A Putative methyltransfer 89.1 0.37 1.3E-05 47.7 5.2 89 74-165 117-214 (259)
291 3b5i_A S-adenosyl-L-methionine 89.0 2.4 8.4E-05 44.8 11.7 123 317-452 53-228 (374)
292 3gru_A Dimethyladenosine trans 88.6 0.57 1.9E-05 48.0 6.3 77 313-413 49-126 (295)
293 2h1r_A Dimethyladenosine trans 88.6 0.28 9.6E-06 50.1 4.0 34 313-351 41-74 (299)
294 2h00_A Methyltransferase 10 do 88.5 0.3 1E-05 47.9 4.0 32 319-351 68-99 (254)
295 3ftd_A Dimethyladenosine trans 87.0 0.39 1.3E-05 47.9 3.7 35 313-351 30-64 (249)
296 3tqs_A Ribosomal RNA small sub 86.9 0.58 2E-05 46.8 5.0 34 313-351 28-61 (255)
297 3o4f_A Spermidine synthase; am 86.1 2.8 9.7E-05 42.9 9.7 153 319-493 86-245 (294)
298 3gjy_A Spermidine synthase; AP 84.8 1.2 4E-05 46.2 6.1 89 74-169 157-248 (317)
299 4azs_A Methyltransferase WBDD; 83.9 0.81 2.8E-05 51.0 4.8 31 318-351 68-98 (569)
300 4gqb_A Protein arginine N-meth 83.2 0.33 1.1E-05 55.0 1.3 102 317-446 358-464 (637)
301 1dus_A MJ0882; hypothetical pr 82.5 1.1 3.7E-05 41.0 4.4 64 75-150 118-181 (194)
302 3fut_A Dimethyladenosine trans 81.1 0.93 3.2E-05 45.8 3.6 30 319-351 49-78 (271)
303 1m6e_X S-adenosyl-L-methionnin 80.3 1.8 6E-05 45.7 5.5 119 317-452 52-212 (359)
304 2r6z_A UPF0341 protein in RSP 80.2 0.79 2.7E-05 45.9 2.7 30 319-351 86-115 (258)
305 3khk_A Type I restriction-modi 79.8 0.29 9.8E-06 54.6 -0.8 131 319-468 247-418 (544)
306 1uwv_A 23S rRNA (uracil-5-)-me 79.8 1.5 5E-05 47.2 4.8 30 319-351 289-318 (433)
307 2bm8_A Cephalosporin hydroxyla 79.4 1.2 4.2E-05 43.5 3.7 54 48-123 131-186 (236)
308 4eez_A Alcohol dehydrogenase 1 78.8 1.6 5.4E-05 44.9 4.5 103 313-450 162-264 (348)
309 1qyr_A KSGA, high level kasuga 78.8 2 6.7E-05 42.8 5.0 34 313-351 20-53 (252)
310 3c6k_A Spermine synthase; sper 78.7 4.7 0.00016 42.8 8.1 148 319-477 208-360 (381)
311 2efj_A 3,7-dimethylxanthine me 78.7 5.2 0.00018 42.5 8.5 123 317-452 53-228 (384)
312 3cvo_A Methyltransferase-like 78.2 1.8 6.1E-05 41.9 4.4 29 319-351 33-61 (202)
313 3fzg_A 16S rRNA methylase; met 78.0 1.8 6.1E-05 41.9 4.2 32 319-351 52-83 (200)
314 3adn_A Spermidine synthase; am 77.5 2.2 7.6E-05 43.4 5.1 85 74-167 155-244 (294)
315 3ua3_A Protein arginine N-meth 77.0 0.59 2E-05 53.4 0.6 107 318-446 411-531 (745)
316 2jjq_A Uncharacterized RNA met 75.8 2 7E-05 46.1 4.5 30 319-351 293-322 (425)
317 3ll7_A Putative methyltransfer 75.8 1.8 6.1E-05 46.5 4.0 34 313-351 92-125 (410)
318 3mti_A RRNA methylase; SAM-dep 75.1 3.4 0.00012 37.8 5.3 53 74-128 87-139 (185)
319 3iyl_W VP1; non-enveloped viru 75.0 7.3 0.00025 46.4 8.9 91 73-168 571-662 (1299)
320 2oyr_A UPF0341 protein YHIQ; a 75.0 1.7 5.9E-05 43.6 3.4 30 319-351 91-120 (258)
321 3k0b_A Predicted N6-adenine-sp 74.9 3.6 0.00012 43.7 6.0 18 319-336 204-221 (393)
322 3g7u_A Cytosine-specific methy 74.7 1.3 4.4E-05 46.9 2.5 80 318-416 3-84 (376)
323 3ubt_Y Modification methylase 74.1 1.6 5.5E-05 44.6 3.0 72 319-416 2-74 (331)
324 2i7c_A Spermidine synthase; tr 74.0 2.7 9.1E-05 42.3 4.6 68 74-149 149-219 (283)
325 1vpt_A VP39; RNA CAP, poly(A) 69.9 43 0.0015 34.6 12.2 147 319-492 78-229 (348)
326 3bt7_A TRNA (uracil-5-)-methyl 69.2 2.8 9.7E-05 43.8 3.6 30 319-351 216-245 (369)
327 1ej6_A Lambda2; icosahedral, n 68.5 7.5 0.00026 46.1 7.0 92 73-169 567-659 (1289)
328 1iy9_A Spermidine synthase; ro 65.5 6 0.00021 39.6 5.0 87 74-167 146-235 (275)
329 2cmg_A Spermidine synthase; tr 65.0 5.8 0.0002 39.5 4.7 60 75-150 138-199 (262)
330 2qfm_A Spermine synthase; sper 64.4 6.6 0.00023 41.4 5.2 85 74-160 265-351 (364)
331 1uir_A Polyamine aminopropyltr 63.8 8.3 0.00028 39.3 5.8 69 74-149 149-223 (314)
332 3evz_A Methyltransferase; NYSG 63.1 5.7 0.00019 37.7 4.1 76 75-151 122-205 (230)
333 3cgg_A SAM-dependent methyltra 62.8 13 0.00046 33.4 6.5 75 74-156 105-180 (195)
334 3e8s_A Putative SAM dependent 62.6 21 0.0007 33.1 8.0 71 74-156 114-214 (227)
335 3c6k_A Spermine synthase; sper 62.2 5.3 0.00018 42.4 3.9 78 74-154 282-362 (381)
336 3e05_A Precorrin-6Y C5,15-meth 62.2 6.3 0.00021 36.8 4.2 58 75-149 107-165 (204)
337 3h2b_A SAM-dependent methyltra 61.9 21 0.00071 32.9 7.8 68 74-150 100-181 (203)
338 3eey_A Putative rRNA methylase 61.6 8.2 0.00028 35.6 4.9 52 74-128 91-143 (197)
339 3mag_A VP39; methylated adenin 61.2 75 0.0026 32.4 11.9 150 319-493 63-215 (307)
340 4dzr_A Protein-(glutamine-N5) 60.8 6.5 0.00022 36.4 4.0 87 74-167 99-204 (215)
341 2k4m_A TR8_protein, UPF0146 pr 58.3 13 0.00043 34.4 5.2 88 319-454 38-126 (153)
342 1e3j_A NADP(H)-dependent ketos 57.7 11 0.00036 38.8 5.3 97 313-448 167-270 (352)
343 1l3i_A Precorrin-6Y methyltran 57.6 2.6 9E-05 38.3 0.6 59 75-150 99-158 (192)
344 1inl_A Spermidine synthase; be 57.4 6.5 0.00022 39.7 3.6 87 74-167 161-251 (296)
345 4a2c_A Galactitol-1-phosphate 57.3 12 0.0004 38.2 5.5 103 313-450 159-261 (346)
346 3hm2_A Precorrin-6Y C5,15-meth 57.0 13 0.00045 33.3 5.3 52 75-143 93-144 (178)
347 3duw_A OMT, O-methyltransferas 56.3 9.7 0.00033 35.9 4.4 35 75-123 132-166 (223)
348 4dmg_A Putative uncharacterize 56.0 19 0.00066 38.0 7.1 65 76-143 280-344 (393)
349 3kyh_C MRNA-capping enzyme sub 54.9 17 0.00058 39.5 6.4 42 578-621 124-165 (461)
350 2pt6_A Spermidine synthase; tr 54.8 14 0.00048 37.8 5.6 69 74-150 187-258 (321)
351 2dph_A Formaldehyde dismutase; 54.6 7.4 0.00025 40.8 3.5 36 312-350 183-219 (398)
352 2igt_A SAM dependent methyltra 54.6 13 0.00044 38.3 5.3 68 74-143 223-291 (332)
353 1g8a_A Fibrillarin-like PRE-rR 54.4 4.6 0.00016 38.4 1.8 55 47-123 122-177 (227)
354 2yxl_A PH0851 protein, 450AA l 54.1 9.1 0.00031 41.1 4.2 72 75-146 329-414 (450)
355 3rtx_A MRNA-capping enzyme; gu 52.3 25 0.00084 36.7 7.0 61 556-620 83-149 (343)
356 2ipx_A RRNA 2'-O-methyltransfe 52.2 9.4 0.00032 36.5 3.6 58 47-126 126-184 (233)
357 3ajd_A Putative methyltransfer 52.2 15 0.0005 36.5 5.1 66 74-139 154-226 (274)
358 2yvl_A TRMI protein, hypotheti 51.9 12 0.00041 35.7 4.4 57 75-149 157-213 (248)
359 3a27_A TYW2, uncharacterized p 51.8 2.9 0.0001 41.7 -0.2 79 75-168 185-267 (272)
360 3ggd_A SAM-dependent methyltra 51.3 35 0.0012 32.3 7.6 64 48-127 102-166 (245)
361 3bwc_A Spermidine synthase; SA 51.1 6.7 0.00023 39.8 2.4 86 74-167 167-257 (304)
362 3orh_A Guanidinoacetate N-meth 50.7 11 0.00038 36.4 3.8 43 74-122 126-168 (236)
363 2zig_A TTHA0409, putative modi 50.6 11 0.00039 37.8 4.1 34 313-351 234-267 (297)
364 1i4w_A Mitochondrial replicati 50.3 13 0.00045 38.8 4.6 31 319-350 61-91 (353)
365 3frh_A 16S rRNA methylase; met 49.3 14 0.00049 36.8 4.4 28 319-350 108-135 (253)
366 1ixk_A Methyltransferase; open 49.3 28 0.00097 35.2 6.9 52 75-126 186-248 (315)
367 1p16_A GTP--RNA, mRNA capping 49.1 23 0.00077 37.5 6.3 62 557-621 85-156 (395)
368 3tfw_A Putative O-methyltransf 49.1 13 0.00045 36.1 4.1 35 75-123 135-169 (248)
369 1o9g_A RRNA methyltransferase; 49.0 23 0.00079 34.1 5.9 67 51-127 150-216 (250)
370 3ldu_A Putative methylase; str 48.5 15 0.0005 38.8 4.6 23 313-337 194-216 (385)
371 3e23_A Uncharacterized protein 48.4 24 0.00081 32.8 5.7 83 74-165 100-197 (211)
372 1xj5_A Spermidine synthase 1; 47.9 12 0.00043 38.5 3.9 64 74-145 192-258 (334)
373 2b2c_A Spermidine synthase; be 47.5 14 0.00046 37.9 4.1 67 74-149 179-249 (314)
374 1mjf_A Spermidine synthase; sp 47.5 16 0.00056 36.4 4.6 69 74-150 150-221 (281)
375 3grz_A L11 mtase, ribosomal pr 47.1 9.9 0.00034 35.3 2.8 41 107-149 142-183 (205)
376 1wxx_A TT1595, hypothetical pr 46.9 29 0.001 36.1 6.7 53 74-128 277-329 (382)
377 3fpc_A NADP-dependent alcohol 46.6 8.8 0.0003 39.4 2.5 101 312-450 164-267 (352)
378 2as0_A Hypothetical protein PH 46.5 31 0.0011 36.0 6.8 65 74-141 287-351 (396)
379 2py6_A Methyltransferase FKBM; 46.2 16 0.00054 38.8 4.5 36 312-349 224-260 (409)
380 1f8f_A Benzyl alcohol dehydrog 46.2 12 0.00041 38.7 3.5 99 312-448 188-288 (371)
381 1pl8_A Human sorbitol dehydrog 45.4 24 0.00083 36.1 5.7 99 312-448 169-272 (356)
382 3njr_A Precorrin-6Y methylase; 45.4 27 0.00091 32.8 5.6 49 76-142 122-170 (204)
383 2o07_A Spermidine synthase; st 45.3 15 0.00052 37.2 4.0 68 74-149 166-236 (304)
384 3r3h_A O-methyltransferase, SA 44.8 9.2 0.00031 37.3 2.2 36 74-123 134-169 (242)
385 3ntv_A MW1564 protein; rossman 44.5 12 0.00041 35.9 3.0 34 75-122 141-174 (232)
386 1vj0_A Alcohol dehydrogenase, 44.5 14 0.00048 38.4 3.7 101 313-448 194-297 (380)
387 2ex4_A Adrenal gland protein A 44.4 42 0.0014 31.8 6.9 68 75-151 145-225 (241)
388 3lcv_B Sisomicin-gentamicin re 44.4 5.1 0.00018 40.6 0.3 32 319-351 135-166 (281)
389 3tr6_A O-methyltransferase; ce 44.1 10 0.00035 35.7 2.4 35 75-123 139-173 (225)
390 1pqw_A Polyketide synthase; ro 43.6 13 0.00044 34.5 3.0 97 312-447 36-135 (198)
391 3gms_A Putative NADPH:quinone 43.6 25 0.00086 35.7 5.4 102 312-451 142-245 (340)
392 3lcc_A Putative methyl chlorid 43.1 69 0.0023 30.1 8.2 65 76-149 132-205 (235)
393 3m6w_A RRNA methylase; rRNA me 42.9 27 0.00092 37.9 5.7 51 74-124 168-229 (464)
394 3u81_A Catechol O-methyltransf 42.6 31 0.0011 32.5 5.6 58 75-146 133-192 (221)
395 3o4f_A Spermidine synthase; am 42.6 26 0.00087 35.7 5.2 87 74-168 155-245 (294)
396 4df3_A Fibrillarin-like rRNA/T 42.4 18 0.00063 35.5 3.9 37 75-124 146-182 (233)
397 2b3t_A Protein methyltransfera 42.3 25 0.00084 34.6 5.0 44 106-152 220-264 (276)
398 1sui_A Caffeoyl-COA O-methyltr 42.2 15 0.00052 35.8 3.3 34 75-122 155-188 (247)
399 2xvm_A Tellurite resistance pr 42.1 35 0.0012 30.9 5.7 65 75-149 96-171 (199)
400 2b25_A Hypothetical protein; s 42.1 18 0.0006 36.8 4.0 49 75-141 186-234 (336)
401 1nt2_A Fibrillarin-like PRE-rR 41.9 15 0.00052 34.8 3.2 63 75-150 125-194 (210)
402 3m4x_A NOL1/NOP2/SUN family pr 41.7 47 0.0016 35.8 7.4 51 75-125 174-235 (456)
403 3mb5_A SAM-dependent methyltra 41.6 15 0.0005 35.4 3.1 60 74-151 160-222 (255)
404 3lkd_A Type I restriction-modi 41.4 13 0.00046 41.1 3.1 131 319-466 224-378 (542)
405 1sqg_A SUN protein, FMU protei 40.8 18 0.00063 38.4 4.0 69 74-142 313-393 (429)
406 2zfu_A Nucleomethylin, cerebra 40.6 39 0.0013 31.3 5.9 63 74-148 113-176 (215)
407 3dli_A Methyltransferase; PSI- 40.6 25 0.00085 33.5 4.6 46 73-127 98-143 (240)
408 3p9n_A Possible methyltransfer 40.4 31 0.0011 31.4 5.1 44 74-127 111-156 (189)
409 3qwb_A Probable quinone oxidor 40.4 17 0.00059 36.8 3.6 99 312-448 146-246 (334)
410 2gb4_A Thiopurine S-methyltran 40.3 60 0.002 31.7 7.4 80 49-148 135-224 (252)
411 3dr5_A Putative O-methyltransf 40.2 17 0.00059 34.8 3.3 35 74-122 127-161 (221)
412 3s2e_A Zinc-containing alcohol 40.1 27 0.00092 35.4 5.0 98 312-448 164-262 (340)
413 2avd_A Catechol-O-methyltransf 39.1 12 0.0004 35.4 1.9 34 75-122 144-177 (229)
414 3me5_A Cytosine-specific methy 39.1 30 0.001 37.7 5.4 34 315-350 86-119 (482)
415 2pjd_A Ribosomal RNA small sub 38.8 49 0.0017 33.7 6.8 64 75-149 260-323 (343)
416 3jyn_A Quinone oxidoreductase; 38.8 17 0.00058 36.7 3.2 101 312-451 138-241 (325)
417 1jsx_A Glucose-inhibited divis 37.9 24 0.00083 32.5 3.9 38 107-148 148-185 (207)
418 1e3i_A Alcohol dehydrogenase, 37.2 52 0.0018 33.8 6.7 99 312-448 193-296 (376)
419 3c3y_A Pfomt, O-methyltransfer 36.9 17 0.00058 35.1 2.7 34 75-122 146-179 (237)
420 2frx_A Hypothetical protein YE 36.9 47 0.0016 36.0 6.5 52 75-126 186-248 (479)
421 3hem_A Cyclopropane-fatty-acyl 36.7 31 0.001 34.2 4.7 22 107-128 166-187 (302)
422 2nxc_A L11 mtase, ribosomal pr 36.6 36 0.0012 33.1 5.1 59 75-149 183-242 (254)
423 1ri5_A MRNA capping enzyme; me 36.6 18 0.00062 35.4 2.9 46 75-127 132-177 (298)
424 2pxx_A Uncharacterized protein 36.6 25 0.00087 32.2 3.8 22 106-127 141-162 (215)
425 3dmg_A Probable ribosomal RNA 36.1 56 0.0019 34.2 6.8 64 75-149 297-360 (381)
426 2gpy_A O-methyltransferase; st 36.1 14 0.00048 35.2 1.9 35 75-123 125-159 (233)
427 1ckm_A MRNA capping enzyme; nu 35.9 33 0.0011 35.4 4.8 60 556-621 98-158 (330)
428 1p0f_A NADP-dependent alcohol 35.7 45 0.0015 34.3 5.9 99 312-448 189-292 (373)
429 2frn_A Hypothetical protein PH 35.4 31 0.0011 34.1 4.5 54 74-142 190-247 (278)
430 1cdo_A Alcohol dehydrogenase; 35.1 58 0.002 33.4 6.7 15 434-448 278-293 (374)
431 3jv7_A ADH-A; dehydrogenase, n 34.5 28 0.00095 35.4 4.0 99 312-449 169-270 (345)
432 1kpg_A CFA synthase;, cyclopro 34.4 34 0.0012 33.4 4.5 44 75-127 128-171 (287)
433 1uuf_A YAHK, zinc-type alcohol 34.4 20 0.00067 37.2 2.9 35 313-351 193-228 (369)
434 1zx0_A Guanidinoacetate N-meth 33.6 25 0.00084 33.5 3.3 43 74-122 126-168 (236)
435 3hnr_A Probable methyltransfer 33.4 33 0.0011 31.8 4.1 43 75-126 105-147 (220)
436 3i9f_A Putative type 11 methyl 33.3 74 0.0025 28.0 6.3 66 74-151 73-148 (170)
437 3tma_A Methyltransferase; thum 33.0 52 0.0018 33.6 5.8 48 75-125 271-318 (354)
438 2fk8_A Methoxy mycolic acid sy 33.0 41 0.0014 33.5 4.9 44 76-128 155-198 (318)
439 2qrv_A DNA (cytosine-5)-methyl 32.6 31 0.0011 35.0 3.9 33 317-350 16-49 (295)
440 1ws6_A Methyltransferase; stru 32.6 23 0.0008 31.2 2.7 42 75-127 109-150 (171)
441 4a27_A Synaptic vesicle membra 32.1 33 0.0011 34.9 4.2 97 312-449 140-238 (349)
442 2jhf_A Alcohol dehydrogenase E 31.9 66 0.0023 33.0 6.4 15 434-448 277-292 (374)
443 3dh0_A SAM dependent methyltra 31.8 79 0.0027 29.1 6.5 66 74-150 104-180 (219)
444 3cbg_A O-methyltransferase; cy 31.8 20 0.00067 34.4 2.2 35 75-123 147-181 (232)
445 3uko_A Alcohol dehydrogenase c 31.7 61 0.0021 33.4 6.1 100 312-450 191-296 (378)
446 1g60_A Adenine-specific methyl 31.2 38 0.0013 33.2 4.2 34 313-351 211-244 (260)
447 3iht_A S-adenosyl-L-methionine 31.1 3E+02 0.01 25.6 9.7 102 320-449 44-147 (174)
448 1xdz_A Methyltransferase GIDB; 30.8 26 0.00089 33.5 2.9 33 75-122 140-172 (240)
449 2ld4_A Anamorsin; methyltransf 30.7 31 0.0011 31.0 3.3 40 399-448 61-100 (176)
450 1g55_A DNA cytosine methyltran 30.6 35 0.0012 35.1 4.1 147 318-491 3-167 (343)
451 4h0n_A DNMT2; SAH binding, tra 30.4 35 0.0012 35.2 3.9 33 317-350 3-36 (333)
452 4dcm_A Ribosomal RNA large sub 30.2 73 0.0025 33.2 6.4 65 74-149 290-354 (375)
453 1o54_A SAM-dependent O-methylt 30.2 29 0.00099 34.0 3.2 59 75-151 180-239 (277)
454 1boo_A Protein (N-4 cytosine-s 30.2 53 0.0018 33.4 5.3 34 313-351 251-284 (323)
455 3ldg_A Putative uncharacterize 30.1 41 0.0014 35.3 4.5 22 313-336 193-214 (384)
456 2fzw_A Alcohol dehydrogenase c 29.6 59 0.002 33.3 5.6 15 434-448 276-291 (373)
457 1kol_A Formaldehyde dehydrogen 29.3 41 0.0014 34.9 4.3 35 312-350 183-219 (398)
458 1xtp_A LMAJ004091AAA; SGPP, st 29.1 65 0.0022 30.4 5.4 44 107-150 180-237 (254)
459 1dhr_A Dihydropteridine reduct 29.1 1.7E+02 0.0058 27.5 8.5 37 51-87 51-87 (241)
460 1vlm_A SAM-dependent methyltra 28.7 85 0.0029 29.2 6.1 43 74-127 100-142 (219)
461 3q87_B N6 adenine specific DNA 28.6 1.5E+02 0.0051 26.5 7.6 79 47-150 61-148 (170)
462 3sm3_A SAM-dependent methyltra 28.6 75 0.0026 29.4 5.7 45 74-126 99-143 (235)
463 3pxx_A Carveol dehydrogenase; 28.4 1.7E+02 0.0057 28.2 8.5 69 375-447 75-151 (287)
464 4eye_A Probable oxidoreductase 28.4 49 0.0017 33.6 4.6 97 312-448 157-256 (342)
465 2ld4_A Anamorsin; methyltransf 28.2 42 0.0014 30.1 3.7 40 74-123 61-100 (176)
466 3qv2_A 5-cytosine DNA methyltr 27.9 47 0.0016 34.1 4.4 77 317-416 10-89 (327)
467 2j8z_A Quinone oxidoreductase; 27.9 34 0.0012 35.0 3.4 101 312-449 160-261 (354)
468 4ej6_A Putative zinc-binding d 27.8 34 0.0012 35.4 3.3 99 313-448 181-283 (370)
469 3lbf_A Protein-L-isoaspartate 27.5 30 0.001 32.0 2.6 36 75-127 142-177 (210)
470 2wk1_A NOVP; transferase, O-me 27.3 2.7E+02 0.0092 27.8 9.8 32 319-350 109-144 (282)
471 2yxd_A Probable cobalt-precorr 27.3 31 0.0011 30.6 2.6 63 75-156 99-161 (183)
472 3orf_A Dihydropteridine reduct 27.3 3.1E+02 0.011 25.9 10.1 74 319-412 24-98 (251)
473 1i9g_A Hypothetical protein RV 27.2 42 0.0014 32.6 3.8 58 75-150 170-229 (280)
474 3oig_A Enoyl-[acyl-carrier-pro 26.9 1.5E+02 0.0052 28.3 7.8 37 375-413 63-99 (266)
475 2hnk_A SAM-dependent O-methylt 26.9 29 0.001 33.1 2.5 35 75-123 146-180 (239)
476 3slk_A Polyketide synthase ext 26.9 1.2E+02 0.0042 34.9 8.1 96 312-448 343-441 (795)
477 3fpf_A Mtnas, putative unchara 26.7 63 0.0022 32.9 5.0 66 75-154 187-253 (298)
478 2c7p_A Modification methylase 26.7 44 0.0015 34.3 3.9 31 318-350 12-42 (327)
479 2fhp_A Methylase, putative; al 26.4 24 0.00082 31.7 1.7 44 74-127 114-157 (187)
480 3hp7_A Hemolysin, putative; st 26.4 38 0.0013 34.3 3.3 33 76-122 151-183 (291)
481 1ooe_A Dihydropteridine reduct 26.3 1.3E+02 0.0045 28.2 7.1 37 51-87 47-83 (236)
482 3m70_A Tellurite resistance pr 26.1 38 0.0013 33.1 3.2 42 75-125 183-224 (286)
483 3m6i_A L-arabinitol 4-dehydrog 26.1 64 0.0022 32.9 5.1 102 312-447 177-281 (363)
484 3ujc_A Phosphoethanolamine N-m 26.1 31 0.001 32.9 2.5 45 74-127 118-162 (266)
485 2pwy_A TRNA (adenine-N(1)-)-me 25.9 36 0.0012 32.4 2.9 57 75-149 165-222 (258)
486 3ip1_A Alcohol dehydrogenase, 25.7 1.1E+02 0.0039 31.6 7.0 104 312-449 211-318 (404)
487 3ou2_A SAM-dependent methyltra 25.6 32 0.0011 31.6 2.4 45 74-127 105-149 (218)
488 1yzh_A TRNA (guanine-N(7)-)-me 25.6 67 0.0023 29.8 4.7 41 107-149 139-180 (214)
489 1yb5_A Quinone oxidoreductase; 25.5 44 0.0015 34.2 3.7 99 312-449 168-269 (351)
490 3is3_A 17BETA-hydroxysteroid d 25.3 2.1E+02 0.0073 27.4 8.6 37 51-89 73-109 (270)
491 2b9e_A NOL1/NOP2/SUN domain fa 25.3 81 0.0028 31.9 5.6 65 75-142 173-253 (309)
492 3f4k_A Putative methyltransfer 25.3 38 0.0013 32.2 3.0 40 74-125 112-151 (257)
493 2vdw_A Vaccinia virus capping 25.2 38 0.0013 34.1 3.1 46 74-127 127-172 (302)
494 2eih_A Alcohol dehydrogenase; 25.2 72 0.0025 32.2 5.2 99 312-448 164-264 (343)
495 3two_A Mannitol dehydrogenase; 25.2 75 0.0026 32.2 5.4 34 312-351 174-210 (348)
496 3g5l_A Putative S-adenosylmeth 25.2 86 0.0029 29.7 5.5 40 74-124 106-145 (253)
497 3izx_A Structural protein VP3; 25.2 1.7E+02 0.0057 34.2 8.3 86 399-492 607-696 (1058)
498 2vdw_B MRNA-capping enzyme sma 25.0 3.8E+02 0.013 26.2 9.7 70 440-511 148-217 (287)
499 1yb2_A Hypothetical protein TA 25.0 35 0.0012 33.5 2.6 58 75-150 178-236 (275)
500 1dhr_A Dihydropteridine reduct 25.0 91 0.0031 29.5 5.7 78 319-412 9-87 (241)
No 1
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=100.00 E-value=3.8e-37 Score=308.75 Aligned_cols=213 Identities=22% Similarity=0.225 Sum_probs=156.4
Q ss_pred hhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHhc
Q psy13508 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRL 296 (621)
Q Consensus 217 i~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~~ 296 (621)
=..+|..++.|+.++|.++|.+. -.|.=+... |-|+|-.+. .-.+|||||+|||.||++++
T Consensus 9 g~~wk~~ln~~~k~~f~~y~~~~-i~e~dr~~a---~~~~~~g~~---------------~~g~yRSRAayKL~EIdeK~ 69 (269)
T 2px2_A 9 GEQWKEKLNAMGKEEFFSYRKEA-ILEVDRTEA---RRARREGNK---------------VGGHPVSRGTAKLRWLVERR 69 (269)
T ss_dssp HHHHHHHHHTSCHHHHHHHHTTT-CEEECGGGT---TC----------------------CCSCCSSTHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCHHHHHHHhhcC-ceEechHHH---HHHHhcCCC---------------cCCCcccHHHHHHHHHHHcC
Confidence 35688999999999999997654 333212111 222222222 23689999999999999997
Q ss_pred CcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcccc-CCC-
Q psy13508 297 NSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPY-YGV- 374 (621)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~-~Gv- 374 (621)
+ ++||+ +||||||||||||||+.++.+. +.+.|.++... + +..++.+. +|+
T Consensus 70 -l-------------ikpg~--~VVDLGaAPGGWSQvAa~~~~v-g~V~G~vig~D----~------~~~P~~~~~~Gv~ 122 (269)
T 2px2_A 70 -F-------------VQPIG--KVVDLGCGRGGWSYYAATMKNV-QEVRGYTKGGP----G------HEEPMLMQSYGWN 122 (269)
T ss_dssp -S-------------CCCCE--EEEEETCTTSHHHHHHTTSTTE-EEEEEECCCST----T------SCCCCCCCSTTGG
T ss_pred -C-------------CCCCC--EEEEcCCCCCHHHHHHhhhcCC-CCceeEEEccc----c------ccCCCcccCCCce
Confidence 6 58888 8999999999999999987332 33345554321 0 01234444 675
Q ss_pred cc---cc-cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCc-EEEEEE
Q psy13508 375 KG---NG-DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEG-HFVCKV 449 (621)
Q Consensus 375 ~~---~G-DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG-~fV~K~ 449 (621)
.+ +| ||++. .+.++|+|||||||+ +|+...|+..+.. .+.+|..+|+||| +||||+
T Consensus 123 ~i~~~~G~Df~~~--------------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 123 IVTMKSGVDVFYK--------------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp GEEEECSCCGGGS--------------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEE
T ss_pred EEEeeccCCccCC--------------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEE
Confidence 33 37 99961 366899999999999 9999999885433 6678999999999 999999
Q ss_pred ccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCC
Q psy13508 450 FDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 450 F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
|++..+...+++..|++.|..|.+.|| +||+.|+|+|+||+....
T Consensus 184 Fqg~~~~~~~~l~~lk~~F~~vkvk~p-aSR~~S~E~YlVa~~~~n 228 (269)
T 2px2_A 184 LCPYMPKVIEKLESLQRRFGGGLVRVP-LSRNSNHEMYWVSGASGN 228 (269)
T ss_dssp SCTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCSC
T ss_pred CCCCchHHHHHHHHHHHHcCCEEEECC-CCCCCCccEEEEecccCc
Confidence 997555566677899999999997555 999999999999976643
No 2
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=5e-36 Score=292.84 Aligned_cols=182 Identities=18% Similarity=0.212 Sum_probs=150.4
Q ss_pred CCcchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCC
Q psy13508 278 NGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKL 357 (621)
Q Consensus 278 ~~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l 357 (621)
..+||+||||||+||+++|++ +++|. +|||||||||+|++++.++ .++++|+|+.+..
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~-------------~~~g~--~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~---- 59 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRV-------------VRKGD--AVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME---- 59 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCC-------------SCTTC--EEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC----
T ss_pred CCCCCCcHHHHHHHHHHHcCC-------------CCCCC--EEEEEeecCCHHHHHHHHc---CCcEEEEeccccc----
Confidence 368999999999999999987 46676 8999999999999999876 6899999998532
Q ss_pred CcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhh
Q psy13508 358 DDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL 436 (621)
Q Consensus 358 ~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al 436 (621)
+..++ ..+||+++..+.+.+.+.+.... ...+|+|+|||+|+++|.+..|+..+..+....+..|.
T Consensus 60 ------------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~ 126 (191)
T 3dou_A 60 ------------EIAGVRFIRCDIFKETIFDDIDRALREEG-IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAV 126 (191)
T ss_dssp ------------CCTTCEEEECCTTSSSHHHHHHHHHHHHT-CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------cCCCeEEEEccccCHHHHHHHHHHhhccc-CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHH
Confidence 12344 57899999888887776653222 13899999999999999999998877777777788999
Q ss_pred hccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCC
Q psy13508 437 FIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPD 496 (621)
Q Consensus 437 ~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~ 496 (621)
.+|||||+||+|+|++.+ ...+++.|+..|.+|.++||.+||++|+|+|+||+||+..
T Consensus 127 ~~LkpGG~lv~k~~~~~~--~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~~ 184 (191)
T 3dou_A 127 RYLRNGGNVLLKQFQGDM--TNDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKAE 184 (191)
T ss_dssp HHEEEEEEEEEEEECSTH--HHHHHHHHGGGEEEEEEECC------CCEEEEEEEEECCC
T ss_pred HHccCCCEEEEEEcCCCC--HHHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeeccc
Confidence 999999999999999865 6789999999999999999999999999999999999874
No 3
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=100.00 E-value=9.1e-36 Score=305.09 Aligned_cols=233 Identities=18% Similarity=0.151 Sum_probs=174.8
Q ss_pred hhhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHh
Q psy13508 216 LVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKR 295 (621)
Q Consensus 216 li~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~ 295 (621)
|...+|..+|.|+.++|.++|.+. -.|.=+.. -|.+++-.+. .-.+|||||||||.||+++
T Consensus 16 lg~~wk~~Ln~l~k~~f~~y~~~~-i~e~dr~~---ar~~l~~~~~---------------~~g~yrSRaa~KL~ei~ek 76 (300)
T 3eld_A 16 LGEVWKRQLNMLGKQEFERYKVSD-ITEVDRTA---ARRYLKEGRT---------------DVGISVSRGAAKIRWLHER 76 (300)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTT-CEEECCHH---HHHHHHHTCS---------------SSCCCSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHhhhhhc-cccccHHH---HHHHHHcCCc---------------cCCCccchHHHHHHHHHHh
Confidence 457799999999999999887654 22321111 1222222211 1268999999999999999
Q ss_pred cCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-
Q psy13508 296 LNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV- 374 (621)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv- 374 (621)
++ +++|. +|||||||||||+||++++.+ ...+.|+|+.......+ .... .+|.
T Consensus 77 -~l-------------~~~g~--~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P-----~~~~----~~~~~ 130 (300)
T 3eld_A 77 -GY-------------LRITG--RVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKP-----IHMQ----TLGWN 130 (300)
T ss_dssp -TS-------------CCCCE--EEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCC-----CCCC----BTTGG
T ss_pred -CC-------------CCCCC--EEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccc-----cccc----ccCCc
Confidence 87 46676 899999999999999998643 35688999964211110 0000 1121
Q ss_pred ---cccc-cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEEE
Q psy13508 375 ---KGNG-DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKV 449 (621)
Q Consensus 375 ---~~~G-DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K~ 449 (621)
...| |+.. +.+..+|+|+|||+|+ +|.+..|+..+..| +.+|..+|+|| |+||||+
T Consensus 131 iv~~~~~~di~~--------------l~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 131 IVKFKDKSNVFT--------------MPTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKV 191 (300)
T ss_dssp GEEEECSCCTTT--------------SCCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEE
T ss_pred eEEeecCceeee--------------cCCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEe
Confidence 1111 3321 2467899999999999 99999999876555 77999999999 9999999
Q ss_pred ccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHHHHHHhh
Q psy13508 450 FDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLDR 513 (621)
Q Consensus 450 F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~~~~l~~ 513 (621)
|+.|.+...+|++.|+++|.+|.++|| |||++|+|+|+||.+...+...+......++.++..
T Consensus 192 F~~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~~~ 254 (300)
T 3eld_A 192 LAPYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEMYYISGARNNITHMVNTTSRSLLRRMTR 254 (300)
T ss_dssp SSTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ccccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCCCCcchhHHHHHHHHHHHHhc
Confidence 996667789999999999999999999 999999999999999877777777777778777764
No 4
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=100.00 E-value=7.8e-36 Score=303.96 Aligned_cols=230 Identities=20% Similarity=0.181 Sum_probs=168.9
Q ss_pred hhhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHh
Q psy13508 216 LVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKR 295 (621)
Q Consensus 216 li~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~ 295 (621)
|...+|..+|.|+.++|.++|.+. -.|.=+.. -|.+++-. .....|||||||||+||+++
T Consensus 26 lg~~wk~~ln~l~k~~f~~y~~~~-i~e~~r~~---ar~~l~~~----------------~~~g~YrSRAAfKL~ei~eK 85 (282)
T 3gcz_A 26 PGEAWKKQLNKLGKTQFEQYKRSC-ILEVDRTH---ARDSLENG----------------IQNGIAVSRGSAKLRWMEER 85 (282)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHTTT-CEEECCHH---HHHHHHHT----------------CCSSBCSSTHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHhhhhhc-eeeccHHH---HHHHHhcC----------------CcCCCEecHHHHHHHHHHHh
Confidence 356789999999999999887654 33321110 12222211 11268999999999999999
Q ss_pred cCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-
Q psy13508 296 LNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV- 374 (621)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv- 374 (621)
| + ++++. +|||||||||||+||++.+. ....+.|+|+..... ..+.+ +.. +|.
T Consensus 86 ~-~-------------Lk~~~--~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~-----~~pi~---~~~-~g~~ 139 (282)
T 3gcz_A 86 G-Y-------------VKPTG--IVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGH-----EKPIM---RTT-LGWN 139 (282)
T ss_dssp T-S-------------CCCCE--EEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTS-----CCCCC---CCB-TTGG
T ss_pred c-C-------------CCCCC--EEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCcc-----ccccc---ccc-CCCc
Confidence 8 4 36776 89999999999999999755 345788999874211 11111 111 232
Q ss_pred --cccc--cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC--cEEEEE
Q psy13508 375 --KGNG--DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE--GHFVCK 448 (621)
Q Consensus 375 --~~~G--DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G--G~fV~K 448 (621)
.... |+. .+.+.++|+|||||+|+ +|.+..|+..+..| +.+|..+|+|| |+||||
T Consensus 140 ii~~~~~~dv~--------------~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 140 LIRFKDKTDVF--------------NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp GEEEECSCCGG--------------GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEE
T ss_pred eEEeeCCcchh--------------hcCCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEE
Confidence 1111 221 12467899999999999 99999999866554 77899999999 999999
Q ss_pred EccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHHHHHH
Q psy13508 449 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRL 511 (621)
Q Consensus 449 ~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~~~~l 511 (621)
+|+++.+...+++..|+++|.+|.++|| |||++|+|+|+||++...+...+......+..++
T Consensus 201 vF~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~ 262 (282)
T 3gcz_A 201 VLCPYTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTRTDVVGTVSNVSRLLTRRM 262 (282)
T ss_dssp ESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCSHHHHHHHHHHHHHHH
T ss_pred EecCCCccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecCCCccchHHHHHHHHHHHH
Confidence 9996556788999999999999999999 9999999999999998776666665555564444
No 5
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=100.00 E-value=2.7e-34 Score=292.27 Aligned_cols=233 Identities=18% Similarity=0.154 Sum_probs=166.6
Q ss_pred hhhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHh
Q psy13508 216 LVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKR 295 (621)
Q Consensus 216 li~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~ 295 (621)
|...+|..+|.|+.++|.++|.+. -.|.=+.. -|.+++-.+. .-..|||||||||+||+++
T Consensus 9 lg~~wk~~ln~l~k~~f~~y~~~~-i~e~~r~~---ar~~l~~~~~---------------~~~~YrSRaA~KL~ei~ek 69 (277)
T 3evf_A 9 LGEVWKRELNLLDKRQFELYKRTD-IVEVDRDT---ARRHLAEGKV---------------DTGVAVSRGTAKLRWFHER 69 (277)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHTSS-EEEECCHH---HHHHHHTTCC---------------SSCBCSSTHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHhhhhhc-cccccHHH---HHHHHhcCCc---------------cCCCccccHHHHHHHHHHh
Confidence 356788999999999999887654 22321111 1222222211 1257999999999999999
Q ss_pred cCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--
Q psy13508 296 LNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-- 373 (621)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-- 373 (621)
.+ ++++. +||||||||||||||++.+. ....+.|+|+... + ...+.+..+ +|
T Consensus 70 -~~-------------l~~~~--~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvD----l-~~~pi~~~~----~g~~ 123 (277)
T 3evf_A 70 -GY-------------VKLEG--RVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRD----G-HEKPMNVQS----LGWN 123 (277)
T ss_dssp -TS-------------SCCCE--EEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT----T-CCCCCCCCB----TTGG
T ss_pred -CC-------------CCCCC--EEEEecCCCCHHHHHHHHhc-CCCcceeEEEecc----C-cccccccCc----CCCC
Confidence 44 46776 89999999999999998754 2346677777631 1 111111111 12
Q ss_pred -CcccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEEEcc
Q psy13508 374 -VKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVFD 451 (621)
Q Consensus 374 -v~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K~F~ 451 (621)
+..++|+.. ..+.+..+|+|+|||+|+ +|.+..|+..+..| +.+|..+|+|| |+||+|+|+
T Consensus 124 ii~~~~~~dv------------~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 124 IITFKDKTDI------------HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp GEEEECSCCT------------TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESC
T ss_pred eEEEecccee------------hhcCCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecC
Confidence 133444411 013467899999999999 99999999865444 77899999999 999999999
Q ss_pred CCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHHHHHH
Q psy13508 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRL 511 (621)
Q Consensus 452 ~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~~~~l 511 (621)
.+.+...++++.|+++|.+|.++|| |||++|+|+|+||++...+...+......+..++
T Consensus 187 pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~ 245 (277)
T 3evf_A 187 PYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGARSNVTFTVNQTSRLLMRRM 245 (277)
T ss_dssp TTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecCCCccchHHHHHHHHHHHH
Confidence 6556688999999999999999999 9999999999999987655555554445553443
No 6
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.96 E-value=5.1e-28 Score=238.82 Aligned_cols=207 Identities=19% Similarity=0.211 Sum_probs=157.6
Q ss_pred hhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHhc
Q psy13508 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRL 296 (621)
Q Consensus 217 i~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~~ 296 (621)
-..+|..++.|+.++|.++|.+. -.|.=+.. -|-|+|-. .....|+|||+|||.||+++|
T Consensus 15 G~~wK~~LN~l~k~~F~~Yk~~g-i~Evdr~~---ar~~l~~g----------------~~~g~yrSRa~~KL~ei~ek~ 74 (267)
T 3p8z_A 15 GEKWKKKLNQLSRKEFDLYKKSG-ITEVDRTE---AKEGLKRG----------------ETTHHAVSRGSAKLQWFVERN 74 (267)
T ss_dssp HHHHHHHHHHSCHHHHHHHHTTT-CEEEECHH---HHHHHHTT----------------CCSSCCSSTHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCHHHHHHHhhcC-ceEeccHH---HHHHHhcC----------------CcCCCccchHHHHHHHHHHhc
Confidence 35688999999999999997654 33321111 12233211 112689999999999999999
Q ss_pred CcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---
Q psy13508 297 NSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--- 373 (621)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--- 373 (621)
+ +++++ .||||||||||||||++.+.+. .+|+|+|+.+.....+. .+ .-||
T Consensus 75 -~-------------l~~g~--~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~P~--------~~-~s~gwn~ 128 (267)
T 3p8z_A 75 -M-------------VIPEG--RVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEEPV--------PM-STYGWNI 128 (267)
T ss_dssp -S-------------SCCCE--EEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCCCC--------CC-CCTTTTS
T ss_pred -C-------------CCCCC--EEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccCcc--------hh-hhcCcCc
Confidence 4 37777 8999999999999999987653 48999999975432211 11 1233
Q ss_pred C-cccc-cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 374 V-KGNG-DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 374 v-~~~G-DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+ +.+| |++. ....++|+||||+|+ .+|++..++..+. . .+-+|...|++ |+|+||+|.
T Consensus 129 v~fk~gvDv~~--------------~~~~~~DtllcDIge-Ss~~~~vE~~Rtl--r--vLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 129 VKLMSGKDVFY--------------LPPEKCDTLLCDIGE-SSPSPTVEESRTI--R--VLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp EEEECSCCGGG--------------CCCCCCSEEEECCCC-CCSCHHHHHHHHH--H--HHHHHGGGCSS-CEEEEEESC
T ss_pred eEEEeccceee--------------cCCccccEEEEecCC-CCCChhhhhhHHH--H--HHHHHHHhccc-CCEEEEEcc
Confidence 2 6678 8742 135689999999999 8888888876433 2 55577888988 899999999
Q ss_pred CCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEE
Q psy13508 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490 (621)
Q Consensus 452 ~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc 490 (621)
+..|...+.+..|++.|..+.+.||. ||++|.|+|+|.
T Consensus 189 py~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~Vs 226 (267)
T 3p8z_A 189 PYMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWIS 226 (267)
T ss_dssp CCSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEES
T ss_pred CCChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 98877778899999999999999999 999999999994
No 7
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.94 E-value=2.1e-26 Score=223.31 Aligned_cols=181 Identities=21% Similarity=0.241 Sum_probs=138.1
Q ss_pred cchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCC-CCeEEEEecCCCCCCCCC
Q psy13508 280 PFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKW-RAKGIGFTLTGSHDFKLD 358 (621)
Q Consensus 280 ~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~-~~k~~GvdL~~~~~~~l~ 358 (621)
+||+||||||+||+++|++ ++++. +|||||||||+|+.+++++.+. .++++|+|+.+...
T Consensus 1 ~~~~r~~~kl~~~~~~~~~-------------~~~~~--~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---- 61 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLF-------------LKKNK--IILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---- 61 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCC-------------CCTTE--EEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC----
T ss_pred CcchHHHHHHHHHHHHcCC-------------CCCCC--EEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC----
Confidence 6999999999999999987 35665 8999999999999999987643 68999999986321
Q ss_pred cccCCCCCCccccCCC-cccccCCChh-----------------hHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhH
Q psy13508 359 DFFAGPSETFEPYYGV-KGNGDVYDPE-----------------NILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQ 420 (621)
Q Consensus 359 ~~~~~~~~~~~~~~Gv-~~~GDI~~~~-----------------~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~d 420 (621)
..++ ..+||+.+.. ....+.+ .+....+|+|+||++++..|.+..+
T Consensus 62 ------------~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~fD~v~~~~~~~~~g~~~~d 125 (201)
T 2plw_A 62 ------------IPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKE----ILQDKKIDIILSDAAVPCIGNKIDD 125 (201)
T ss_dssp ------------CTTCEEEECCTTTTSSCCC-----------CHHHHHHHH----HHTTCCEEEEEECCCCCCCSCHHHH
T ss_pred ------------CCCceEEEccccchhhhhhccccccccccchhhHHHHHh----hcCCCcccEEEeCCCcCCCCCcccC
Confidence 1122 3456666543 2222222 2345689999999999998887777
Q ss_pred HHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCc
Q psy13508 421 EILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDC 497 (621)
Q Consensus 421 e~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~ 497 (621)
+.....+....+..+.++|+|||.||+++|...+ ...++..+...|..|.++||.+||+.|+|.|+||+||+++.
T Consensus 126 ~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~~ 200 (201)
T 2plw_A 126 HLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ--TNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRK 200 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT--HHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC--HHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecCccCC
Confidence 7655555556666889999999999999998744 67888899999999999999999999999999999998764
No 8
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.94 E-value=2.5e-26 Score=233.78 Aligned_cols=213 Identities=19% Similarity=0.225 Sum_probs=160.2
Q ss_pred hhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHhc
Q psy13508 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRL 296 (621)
Q Consensus 217 i~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~~ 296 (621)
-..+|..|+.|+.++|.++|.+. -.|.=+. .-|-|+|-.+.+ -+.|+|||+|||.||++++
T Consensus 30 G~~wK~~LN~l~k~~F~~Yk~~g-i~Evdr~---~ar~~l~~g~~~---------------~g~y~SR~~~KL~ei~~~~ 90 (321)
T 3lkz_A 30 GEVWKERLNQMTKEEFTRYRKEA-IIEVDRS---AAKHARKEGNVT---------------GGHPVSRGTAKLRWLVERR 90 (321)
T ss_dssp HHHHHHHHTTSCHHHHHHHTTTT-CEEECCH---HHHHHHHHTCCS---------------SCCCSSTHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCHHHHHHHhhcC-ceeechH---HHHHHHhcCcCc---------------CCCccchHHHHHHHHHHhc
Confidence 45689999999999999997654 3332111 123444433333 2679999999999999996
Q ss_pred CcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcc
Q psy13508 297 NSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKG 376 (621)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~ 376 (621)
.+ ++++ .||||||||||||||++.+.+. .+|+|+|+.+.....+. ..+.+.|.--...
T Consensus 91 ~l--------------~~~~--~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P~-----~~~ql~w~lV~~~ 148 (321)
T 3lkz_A 91 FL--------------EPVG--KVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEPQ-----LVQSYGWNIVTMK 148 (321)
T ss_dssp SC--------------CCCE--EEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCCC-----CCCBTTGGGEEEE
T ss_pred CC--------------CCCC--EEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCcc-----hhhhcCCcceEEE
Confidence 44 6776 8999999999999999886653 48999999865322211 1122233221256
Q ss_pred cc-cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEEEccCCC
Q psy13508 377 NG-DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVFDMFT 454 (621)
Q Consensus 377 ~G-DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K~F~~~~ 454 (621)
+| ||... ....+|+|+||+| ..+|++..++..+. . .+-+|...|++| |+|+||+|.++.
T Consensus 149 ~~~Dv~~l--------------~~~~~D~ivcDig-eSs~~~~ve~~Rtl--~--vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 149 SGVDVFYR--------------PSECCDTLLCDIG-ESSSSAEVEEHRTI--R--VLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp CSCCTTSS--------------CCCCCSEEEECCC-CCCSCHHHHHHHHH--H--HHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred eccCHhhC--------------CCCCCCEEEEECc-cCCCChhhhhhHHH--H--HHHHHHHHhccCCCcEEEEEcCCCC
Confidence 66 87542 2467999999999 88899888876433 2 555777889998 999999999987
Q ss_pred CChHHHHHHHHhccceeEeecCCCCCCCCceEEEEE
Q psy13508 455 PFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 490 (621)
Q Consensus 455 ~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc 490 (621)
|...+.+..|++.|..+.+.||. ||+++.|+|+|.
T Consensus 210 ~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vs 244 (321)
T 3lkz_A 210 PKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWVS 244 (321)
T ss_dssp HHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEET
T ss_pred hHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 77778899999999999999999 999999999996
No 9
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.93 E-value=5.5e-25 Score=212.15 Aligned_cols=185 Identities=25% Similarity=0.342 Sum_probs=139.2
Q ss_pred cchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCC--------CeEEEEecCC
Q psy13508 280 PFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWR--------AKGIGFTLTG 351 (621)
Q Consensus 280 ~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~--------~k~~GvdL~~ 351 (621)
+|++||+|||+||++++++ ++++. +|||||||||+|+.++.++.+.. ++++|+|+.+
T Consensus 1 ~~~~r~~~kl~~l~~~~~~-------------~~~~~--~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQI-------------LRPGL--RVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCC-------------CCTTC--EEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred CchhHHHHHHHHHHHhcCC-------------CCCCC--EEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 5899999999999999987 36666 89999999999999999876543 7999999985
Q ss_pred CCCCCCCcccCCCCCCccccCCC-cc-cccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHH
Q psy13508 352 SHDFKLDDFFAGPSETFEPYYGV-KG-NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYL 429 (621)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~~~Gv-~~-~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l 429 (621)
... ..++ .. .+|+++......+.+. +.+..+|+|+||++++++|.+..++.....+..
T Consensus 66 ~~~----------------~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~ 125 (196)
T 2nyu_A 66 IFP----------------LEGATFLCPADVTDPRTSQRILEV----LPGRRADVILSDMAPNATGFRDLDHDRLISLCL 125 (196)
T ss_dssp CCC----------------CTTCEEECSCCTTSHHHHHHHHHH----SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHH
T ss_pred ccc----------------CCCCeEEEeccCCCHHHHHHHHHh----cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHH
Confidence 321 1122 34 7899886655544433 334589999999999999988877765555555
Q ss_pred HHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHH
Q psy13508 430 CQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIR 501 (621)
Q Consensus 430 ~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~ 501 (621)
..+..+.++|+|||.||+++|.... ...++..+...|..+.++||.+||+.++|.|+||+||++....++
T Consensus 126 ~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~~~~~~ 195 (196)
T 2nyu_A 126 TLLSVTPDILQPGGTFLCKTWAGSQ--SRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKGTVK 195 (196)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCSGG--GHHHHHHHHHHEEEEEEECCC--------EEEEEEEECCC-----
T ss_pred HHHHHHHHHhcCCCEEEEEecCCcc--HHHHHHHHHHHhcceEEECCcccCccCceEEEEeeecCCcccccC
Confidence 6666889999999999999998743 568888899999999999999999999999999999998766543
No 10
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.91 E-value=1.7e-24 Score=221.95 Aligned_cols=227 Identities=16% Similarity=0.142 Sum_probs=159.5
Q ss_pred hhhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHh
Q psy13508 216 LVTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKR 295 (621)
Q Consensus 216 li~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~ 295 (621)
+-..+|+.|+.|+.++|..++.+ +-.|.-+. ..+++.+-..+. ...|++|++|||.+|+++
T Consensus 9 ~~~~~k~~l~~~~~~~f~~y~~~-~i~~~~r~---~a~~~i~~g~~~---------------~~~~~sR~a~KL~~i~~~ 69 (265)
T 2oxt_A 9 LGMMWKDKLNAMTKEEFTRYKRA-GVMETDRK---EARDYLKRGDGK---------------TGLSVSRGTAKLAWMEER 69 (265)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHT-TCEEEECH---HHHHHHHHTCCC---------------CCBCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHhhccc-CCCccCHH---HHHHHHHcCCcc---------------CCCccchHHHHHHHHHHc
Confidence 34568889999999999887653 33332111 111222211111 246999999999999999
Q ss_pred cCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--C
Q psy13508 296 LNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--G 373 (621)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--G 373 (621)
.+ +++|. +|||||||||||+++++++ ++|+|+|+.++.. .... .+. .. ..+ +
T Consensus 70 -~~-------------~~~g~--~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m~~-~a~~---~~~-~~-~~~~~~ 123 (265)
T 2oxt_A 70 -GY-------------VELTG--RVVDLGCGRGGWSYYAASR----PHVMDVRAYTLGV-GGHE---VPR-IT-ESYGWN 123 (265)
T ss_dssp -TS-------------CCCCE--EEEEESCTTSHHHHHHHTS----TTEEEEEEECCCC-SSCC---CCC-CC-CBTTGG
T ss_pred -CC-------------CCCCC--EEEEeCcCCCHHHHHHHHc----CcEEEEECchhhh-hhhh---hhh-hh-hccCCC
Confidence 44 36676 8999999999999999875 7899999986411 0000 000 00 011 2
Q ss_pred C-cc--cccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCc--EEEEE
Q psy13508 374 V-KG--NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEG--HFVCK 448 (621)
Q Consensus 374 v-~~--~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG--~fV~K 448 (621)
+ .. +||+++. ....+|+|+||++ +.+|++..++..+ +. .+..+.++|+||| .||+|
T Consensus 124 v~~~~~~~D~~~l--------------~~~~fD~V~sd~~-~~~~~~~~d~~~~--l~--~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 124 IVKFKSRVDIHTL--------------PVERTDVIMCDVG-ESSPKWSVESERT--IK--ILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp GEEEECSCCTTTS--------------CCCCCSEEEECCC-CCCSCHHHHHHHH--HH--HHHHHHHHHHHCTTCEEEEE
T ss_pred eEEEecccCHhHC--------------CCCCCcEEEEeCc-ccCCccchhHHHH--HH--HHHHHHHHhccCCCeEEEEE
Confidence 3 45 8899861 2468999999999 8888887776532 22 4556778999999 99999
Q ss_pred EccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHH
Q psy13508 449 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKL 507 (621)
Q Consensus 449 ~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~ 507 (621)
+|....+...+++..+.+.|..|.++| .+||+.|+|+|+||.++......+...+..+
T Consensus 185 v~~~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l 242 (265)
T 2oxt_A 185 VLCPYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGGNIIGAVTACTERL 242 (265)
T ss_dssp ESCTTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCSCHHHHHHHHHHHH
T ss_pred eCCCCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCCCcchhhHHHHHHH
Confidence 999433222378888999999999999 8999999999999988876666665545455
No 11
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.91 E-value=4.3e-25 Score=221.60 Aligned_cols=131 Identities=17% Similarity=0.105 Sum_probs=109.7
Q ss_pred chhHhhhhhCCCC--CCceeecc--ccccccc-cccc-cc---c-cCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCC
Q psy13508 19 SWIVEGDKKLSID--NETKFCSP--NLLKNVL-QCVK-GN---G-DVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSV 88 (621)
Q Consensus 19 ~W~Qva~~~~~~~--~~~~~~~~--~l~~~~~-~~v~-~~---G-Di~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~ 88 (621)
||||||++++++. .+.+++.| +.++.++ .||+ ++ | ||++. .+.++|+||||||||
T Consensus 86 GWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~--------------~~~~~DvVLSDMAPn- 150 (269)
T 2px2_A 86 GWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYK--------------PSEISDTLLCDIGES- 150 (269)
T ss_dssp HHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGS--------------CCCCCSEEEECCCCC-
T ss_pred HHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCC--------------CCCCCCEEEeCCCCC-
Confidence 8999999995553 46778888 5666665 7885 33 7 99871 366899999999999
Q ss_pred CCChhhhHHHHHHHHHHHHHHHHHhcCCCC-EEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccC
Q psy13508 89 EGQENIQEILSKRLYLCQFLVSLFIVRPEG-HFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKW 167 (621)
Q Consensus 89 sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG-~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~ 167 (621)
||++..||.++. . ++.+|.++|+||| +||||+|+|..+.+.++++.+++.|.+|+. ||.+||.+|+|+|++|..
T Consensus 151 SG~~~vD~~Rs~--~--aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vkv-k~paSR~~S~E~YlVa~~ 225 (269)
T 2px2_A 151 SPSAEIEEQRTL--R--ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGLV-RVPLSRNSNHEMYWVSGA 225 (269)
T ss_dssp CSCHHHHHHHHH--H--HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEE-CCTTSCTTCCCEEEETTC
T ss_pred CCccHHHHHHHH--H--HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEEE-ECCCCCCCCccEEEEecc
Confidence 999999998763 3 8899999999999 999999999666778888899999999996 555999999999999985
Q ss_pred CC
Q psy13508 168 KR 169 (621)
Q Consensus 168 ~~ 169 (621)
..
T Consensus 226 ~~ 227 (269)
T 2px2_A 226 SG 227 (269)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 12
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.91 E-value=7e-24 Score=221.69 Aligned_cols=219 Identities=17% Similarity=0.147 Sum_probs=157.3
Q ss_pred hhcccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHhc
Q psy13508 217 VTSNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRL 296 (621)
Q Consensus 217 i~~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~~ 296 (621)
-...|..++.|+.+.+..++ +.+..|.-+. .|.++ +.. +.. . .+|++|++|||.+|+++
T Consensus 19 ~~~~k~~l~~~~~~~f~~y~-~~~i~e~~~~------~a~~~--l~~------g~~---~--~~~~sR~a~KL~~i~~~- 77 (305)
T 2p41_A 19 GEKWKSRLNALGKSEFQIYK-KSGIQEVDRT------LAKEG--IKR------GET---D--HHAVSRGSAKLRWFVER- 77 (305)
T ss_dssp HHHHHHHHHHSCHHHHHHHH-HTTCEEEECH------HHHHH--HHT------TCC---S--SCCSSTHHHHHHHHHHT-
T ss_pred hHHHHHHHhHhhHHHHHHhc-ccCccccCHH------HHHHH--HHc------CCC---c--CCccccHHHHHHHHHHc-
Confidence 45678889999988888775 4455443111 11111 111 000 0 57999999999999999
Q ss_pred CcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEec----CCCCCCCCCcccCCCCCCcccc-
Q psy13508 297 NSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTL----TGSHDFKLDDFFAGPSETFEPY- 371 (621)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL----~~~~~~~l~~~~~~~~~~~~~~- 371 (621)
.+ +++|. +|||||||||||+++++++ ++|+|+|+ .+.. .+. . .+.+.
T Consensus 78 ~~-------------~~~g~--~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~-~~~---~-----~~~~~~ 129 (305)
T 2p41_A 78 NL-------------VTPEG--KVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGH-EEP---I-----PMSTYG 129 (305)
T ss_dssp TS-------------SCCCE--EEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTS-CCC---C-----CCCSTT
T ss_pred CC-------------CCCCC--EEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhH-HHH---H-----HhhhcC
Confidence 55 46676 8999999999999999975 58999999 2210 111 0 11111
Q ss_pred -CCC-cccc-cCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 372 -YGV-KGNG-DVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 372 -~Gv-~~~G-DI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
.++ ..+| |+++.. ...||+|+||++++ +|.+..++..+ + ..+..+.++|||||.||+|
T Consensus 130 ~~~v~~~~~~D~~~l~--------------~~~fD~V~sd~~~~-~g~~~~d~~~~--l--~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 130 WNLVRLQSGVDVFFIP--------------PERCDTLLCDIGES-SPNPTVEAGRT--L--RVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp GGGEEEECSCCTTTSC--------------CCCCSEEEECCCCC-CSSHHHHHHHH--H--HHHHHHHHHCCTTCEEEEE
T ss_pred CCCeEEEeccccccCC--------------cCCCCEEEECCccc-cCcchhhHHHH--H--HHHHHHHHHhCCCCEEEEE
Confidence 123 4567 777521 34799999999998 88877766532 2 3455677999999999999
Q ss_pred EccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHH
Q psy13508 449 VFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFM 504 (621)
Q Consensus 449 ~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l 504 (621)
+|.+..+....+++.+...|..|.+.|| +||+.|+|.|+||.||+.....+...+
T Consensus 191 v~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~~~~~~~t~~ 245 (305)
T 2p41_A 191 VLNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGNIVSSVNMIS 245 (305)
T ss_dssp ESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCHHHHHHHHH
T ss_pred eCCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCCcccchhHHH
Confidence 9998766667889999999999999999 999999999999999987655554443
No 13
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.90 E-value=3.4e-24 Score=217.34 Aligned_cols=163 Identities=13% Similarity=0.028 Sum_probs=123.8
Q ss_pred CCCCCcceEEEecc------CCChhHHHHHHhcCCC-CeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChh
Q psy13508 312 LGPGELLYFADVCA------GPGGFSEYVLYRKKWR-AKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPE 384 (621)
Q Consensus 312 ~~~g~~~~vlDLca------aPGGwsqyl~~r~~~~-~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~ 384 (621)
++.|+ +|||||| |||+| ++++..+. +.++++||++. ....++.++||++...
T Consensus 107 vp~gm--rVLDLGA~s~kg~APGS~---VLr~~~p~g~~VVavDL~~~----------------~sda~~~IqGD~~~~~ 165 (344)
T 3r24_A 107 VPYNM--RVIHFGAGSDKGVAPGTA---VLRQWLPTGTLLVDSDLNDF----------------VSDADSTLIGDCATVH 165 (344)
T ss_dssp CCTTC--EEEEESCCCTTSBCHHHH---HHHHHSCTTCEEEEEESSCC----------------BCSSSEEEESCGGGEE
T ss_pred ecCCC--EEEeCCCCCCCCCCCcHH---HHHHhCCCCcEEEEeeCccc----------------ccCCCeEEEccccccc
Confidence 45676 9999997 99995 44445665 69999999853 1223356899965411
Q ss_pred hHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHH--hhhhccCCCcEEEEEEccCCCCChHHHHH
Q psy13508 385 NILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL--VSLFIVRPEGHFVCKVFDMFTPFSAGLLY 462 (621)
Q Consensus 385 ~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~--~al~~Lr~GG~fV~K~F~~~~~~s~~ll~ 462 (621)
.+.++|||||||+|+++|..+.+.. ..+.||+++ +|...|+|||+||+|+|+|.. . +.++
T Consensus 166 -------------~~~k~DLVISDMAPNtTG~~D~d~~--Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg--~-~~L~ 227 (344)
T 3r24_A 166 -------------TANKWDLIISDMYDPRTKHVTKEND--SKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--N-ADLY 227 (344)
T ss_dssp -------------ESSCEEEEEECCCCTTSCSSCSCCC--CCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--C-HHHH
T ss_pred -------------cCCCCCEEEecCCCCcCCccccchh--HHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC--H-HHHH
Confidence 2578999999999999999554432 345566655 899999999999999999976 3 5677
Q ss_pred HHHhccceeEeecCCCCCCCCceEEEEEeecCCCchh-HHHHHHHHHHHHhhc
Q psy13508 463 LLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDT-IRDFMFKLNKRLDRY 514 (621)
Q Consensus 463 ~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~-~~~~l~~~~~~l~~~ 514 (621)
.+.+.|+.|+++| .|||..|+|.|+||+||++.... +.-..-..|.+.|..
T Consensus 228 ~lrk~F~~VK~fK-~ASRa~SsEvYLVG~gfKg~~~~~idg~~~hanyifwrn 279 (344)
T 3r24_A 228 KLMGHFSWWTAFV-TNVNASSSEAFLIGANYLGKPKEQIDGYTMHANYIFWRN 279 (344)
T ss_dssp HHHTTEEEEEEEE-EGGGTTSSCEEEEEEEECSSCSSCCCHHHHHHHHHHHHH
T ss_pred HHHhhCCeEEEEC-CCCCCCCeeEEEEeeeccCCCceeeccceeeeeeEEeec
Confidence 7778999999998 59999999999999999996443 444455556666554
No 14
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.89 E-value=8.3e-23 Score=210.66 Aligned_cols=229 Identities=17% Similarity=0.171 Sum_probs=152.4
Q ss_pred cccccccCCChhHHHHhhhccCcchhcccccccchhhhhhccccccccccCCccccccCCCcchhhHHHHHHHHHHhcCc
Q psy13508 219 SNNTVFDELEGDQFFRARNRSNPFELIKNGPFLNRAAMKMANMDKRLNSMFTQPVRENGNGPFLNRAAMKMANMDKRLNS 298 (621)
Q Consensus 219 ~~Ksvfd~l~~~~~~~aR~r~np~e~~~~~~f~nraa~K~a~id~~~~~~~~~~~~~~~~~~~~sRAa~KL~EId~~~~~ 298 (621)
-.|..++.|+.+++.+++.+ .-.+.-+. .-++..+-..+. ...|++|+++||.+|+++ .+
T Consensus 20 ~~~~~l~~l~~~~f~~y~~~-~i~~~dr~---~a~~~i~~~~~~---------------~~~~~sR~a~KL~~i~~~-~~ 79 (276)
T 2wa2_A 20 IWKRKLNQLDAKEFMAYRRR-FVVEVDRN---EAREALAKGKTN---------------TGHAVSRGTAKLAWIDER-GG 79 (276)
T ss_dssp HHHHHHHHCCHHHHHHHHHT-TCCCC--------------------------------------CHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHhhHHHHHHhhhc-CCCccCHH---HHHHHHHcCCCC---------------CCCcCchHHHHHHHHHHc-CC
Confidence 35888999999888877643 22221110 001111100111 146999999999999998 43
Q ss_pred CCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--CC-c
Q psy13508 299 MFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--GV-K 375 (621)
Q Consensus 299 ~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--Gv-~ 375 (621)
+++|. +|||||||||+|+++++++ ++|+|+|+.++.. .... .+. . ...+ ++ .
T Consensus 80 -------------~~~g~--~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m~~-~a~~---~~~-~-~~~~~~~v~~ 134 (276)
T 2wa2_A 80 -------------VELKG--TVVDLGCGRGSWSYYAASQ----PNVREVKAYTLGT-SGHE---KPR-L-VETFGWNLIT 134 (276)
T ss_dssp -------------CCCCE--EEEEESCTTCHHHHHHHTS----TTEEEEEEECCCC-TTSC---CCC-C-CCCTTGGGEE
T ss_pred -------------CCCCC--EEEEeccCCCHHHHHHHHc----CCEEEEECchhhh-hhhh---chh-h-hhhcCCCeEE
Confidence 36676 8999999999999999875 6899999986411 0000 000 0 0011 22 3
Q ss_pred c--cccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCc--EEEEEEcc
Q psy13508 376 G--NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEG--HFVCKVFD 451 (621)
Q Consensus 376 ~--~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG--~fV~K~F~ 451 (621)
. +||+++ +....+|+|+||++ +..+.+..++..+ +. .+..+.++|+||| .||+|+|.
T Consensus 135 ~~~~~D~~~--------------l~~~~fD~Vvsd~~-~~~~~~~~d~~~~--l~--~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 135 FKSKVDVTK--------------MEPFQADTVLCDIG-ESNPTAAVEASRT--LT--VLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EECSCCGGG--------------CCCCCCSEEEECCC-CCCSCHHHHHHHH--HH--HHHHHHHHHHHSTTCEEEEEESC
T ss_pred EeccCcHhh--------------CCCCCcCEEEECCC-cCCCchhhhHHHH--HH--HHHHHHHHhccCCCcEEEEEeCC
Confidence 5 788875 12468999999999 8888887776532 12 4456778999999 99999998
Q ss_pred CCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHHHHHHh
Q psy13508 452 MFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLD 512 (621)
Q Consensus 452 ~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~~~~l~ 512 (621)
...+...+++..+...|..+.++ |.+||+.|+|.|+||.++......+...+..+.+++.
T Consensus 196 ~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l~~r~~ 255 (276)
T 2wa2_A 196 PYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIKNNIMGNVTAVSRQLLKRME 255 (276)
T ss_dssp CCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccCCCcchhHHHHHHHHHHHhh
Confidence 43322237788889999999999 9999999999999998887766666665666655554
No 15
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.88 E-value=1.5e-22 Score=197.29 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=122.0
Q ss_pred chhHhhhhhCCCCCCceeeccccccccccccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHH
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLKNVLQCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEI 97 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~~~~~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~ 97 (621)
+|+|+++++ .+.+++.|..++.++.+++ ++||+++..+.+.+.+.+.... ..++|+|+|||+|+++|.+..|+.
T Consensus 38 ~~s~~la~~----~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-~~~~D~Vlsd~~~~~~g~~~~d~~ 112 (191)
T 3dou_A 38 GWTQVLNSL----ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEG-IEKVDDVVSDAMAKVSGIPSRDHA 112 (191)
T ss_dssp HHHHHHTTT----CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHT-CSSEEEEEECCCCCCCSCHHHHHH
T ss_pred HHHHHHHHc----CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhccc-CCcceEEecCCCcCCCCCcccCHH
Confidence 799999988 4468888888887788887 7999999988877766652211 138999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCCCC
Q psy13508 98 LSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 98 ~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~~~ 170 (621)
.+..+....+..|.++|+|||.||+|+|++. .+..+++.+++.|++|+.+||.+||++|+|.|+||++++.
T Consensus 113 ~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~--~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~ 183 (191)
T 3dou_A 113 VSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD--MTNDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKA 183 (191)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEECST--HHHHHHHHHGGGEEEEEEECC------CCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHccCCCEEEEEEcCCC--CHHHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeecc
Confidence 8888888888999999999999999999995 6789999999999999999999999999999999999986
No 16
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.86 E-value=7.2e-22 Score=201.33 Aligned_cols=92 Identities=20% Similarity=0.119 Sum_probs=84.0
Q ss_pred CCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCC--CEEEEeEccCCCcChHHHHHHHHcccceeEEec
Q psy13508 73 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE--GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 73 ~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~g--G~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
.+.++|+|||||||| ||++..|++++..| +.+|.++|+|| |+||||+|+++.+++.+|++.|++.|++|+..|
T Consensus 153 ~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~K 227 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRV 227 (282)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECC
T ss_pred CCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEc
Confidence 567999999999999 99999999887555 89999999999 999999999332589999999999999999999
Q ss_pred CCCCCCCCceeeecccCCCC
Q psy13508 151 PNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 151 P~aSR~~s~E~y~v~~~~~~ 170 (621)
| +||++|+|+|++|.+..+
T Consensus 228 P-aSR~~S~E~Y~V~~~r~n 246 (282)
T 3gcz_A 228 P-LSRNSTHEMYWVSGTRTD 246 (282)
T ss_dssp T-TSCTTCCCEEEETTCCCC
T ss_pred C-CCcccCcceeEEEecCCC
Confidence 9 999999999999997654
No 17
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.86 E-value=3.2e-22 Score=205.02 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=92.0
Q ss_pred CCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCC-CEEEEeEcc--CCCcChHHHHHHHHcccceeEEe
Q psy13508 73 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVFD--MFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 73 ~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~g-G~fV~KvF~--g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
.+.++|+|+|||||| ||++..|++++..| +.+|..+|+|| |+||||+|+ | +++.+|++.|+++|++|+..
T Consensus 144 ~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~KvF~~yG--~~~~~ll~~lk~~F~~V~~~ 216 (300)
T 3eld_A 144 PTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKVLAPYH--PDVIEKLERLQLRFGGGIVR 216 (300)
T ss_dssp CCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEESSTTS--HHHHHHHHHHHHHHCCEEEC
T ss_pred CCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEeccccC--ccHHHHHHHHHHhCCcEEEE
Confidence 467899999999999 99999999988666 89999999999 999999999 7 58999999999999999999
Q ss_pred cCCCCCCCCceeeecccCCCCCchhHHHHHHHHHHhhh
Q psy13508 150 KPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRLD 187 (621)
Q Consensus 150 KP~aSR~~s~E~y~v~~~~~~~~d~L~~wL~~~nkkl~ 187 (621)
|| +||++|+|+|+||.+..+-...+.........+|.
T Consensus 217 KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~~ 253 (300)
T 3eld_A 217 VP-FSRNSTHEMYYISGARNNITHMVNTTSRSLLRRMT 253 (300)
T ss_dssp CT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHH
T ss_pred eC-CCCCCChHHeeeccCCCCcchhHHHHHHHHHHHHh
Confidence 99 99999999999999876533334444444555554
No 18
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.85 E-value=1.2e-21 Score=199.49 Aligned_cols=133 Identities=16% Similarity=0.134 Sum_probs=104.6
Q ss_pred chhHhhhhhCCCCC--Cceeeccccccccccc-------ccccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCC
Q psy13508 19 SWIVEGDKKLSIDN--ETKFCSPNLLKNVLQC-------VKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE 89 (621)
Q Consensus 19 ~W~Qva~~~~~~~~--~~~~~~~~l~~~~~~~-------v~~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~s 89 (621)
||+|||+++.+... +.++..| +.+.|+.+ +.+++|+.. . .+.+.++|+|+|||||| |
T Consensus 87 GWSQvAa~~~~~~~v~g~dVGvD-l~~~pi~~~~~g~~ii~~~~~~dv-------~-----~l~~~~~DlVlsD~apn-s 152 (277)
T 3evf_A 87 GWCYYAAAQKEVSGVKGFTLGRD-GHEKPMNVQSLGWNIITFKDKTDI-------H-----RLEPVKCDTLLCDIGES-S 152 (277)
T ss_dssp HHHHHHHTSTTEEEEEEECCCCT-TCCCCCCCCBTTGGGEEEECSCCT-------T-----TSCCCCCSEEEECCCCC-C
T ss_pred HHHHHHHHhcCCCcceeEEEecc-CcccccccCcCCCCeEEEecccee-------h-----hcCCCCccEEEecCccC-c
Confidence 89999998865531 2233333 34444443 235666521 0 13567899999999999 9
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHhcCCC-CEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCC
Q psy13508 90 GQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWK 168 (621)
Q Consensus 90 G~~~~d~~~~~~L~l~~l~~A~~~L~~g-G~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~ 168 (621)
|++..|++++..| +.+|.++|+|| |+||+|+|+.+.+++.+|++.|++.|++|+..|| +||++|+|+|++|.+.
T Consensus 153 G~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r 227 (277)
T 3evf_A 153 SSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGAR 227 (277)
T ss_dssp SCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCC
T ss_pred CchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecC
Confidence 9999999887555 88999999999 9999999993225899999999999999999999 9999999999999876
Q ss_pred CC
Q psy13508 169 RP 170 (621)
Q Consensus 169 ~~ 170 (621)
.+
T Consensus 228 ~n 229 (277)
T 3evf_A 228 SN 229 (277)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 19
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.85 E-value=3e-22 Score=203.21 Aligned_cols=131 Identities=10% Similarity=-0.054 Sum_probs=108.1
Q ss_pred HhhhhhCCCCCCceeecccccccccccccccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHH
Q psy13508 22 VEGDKKLSIDNETKFCSPNLLKNVLQCVKGNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKR 101 (621)
Q Consensus 22 Qva~~~~~~~~~~~~~~~~l~~~~~~~v~~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~ 101 (621)
+|+++..+. .+.+++.|+.++.....+.++||+++.. .++++||||||||||+||+.+.|..++..
T Consensus 129 ~VLr~~~p~-g~~VVavDL~~~~sda~~~IqGD~~~~~-------------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~ 194 (344)
T 3r24_A 129 AVLRQWLPT-GTLLVDSDLNDFVSDADSTLIGDCATVH-------------TANKWDLIISDMYDPRTKHVTKENDSKEG 194 (344)
T ss_dssp HHHHHHSCT-TCEEEEEESSCCBCSSSEEEESCGGGEE-------------ESSCEEEEEECCCCTTSCSSCSCCCCCCT
T ss_pred HHHHHhCCC-CcEEEEeeCcccccCCCeEEEccccccc-------------cCCCCCEEEecCCCCcCCccccchhHHHH
Confidence 466666332 3477888888887777788999975422 25789999999999999998777766766
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCCCC
Q psy13508 102 LYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 102 L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~~~ 170 (621)
|+..++.+|.++|+|||+||+|+|||. + .++++.+++.|++|+.+| ++||.+|+|.|++|.+++.
T Consensus 195 L~ElALdfA~~~LkpGGsFvVKVFQGs--g-~~~L~~lrk~F~~VK~fK-~ASRa~SsEvYLVG~gfKg 259 (344)
T 3r24_A 195 FFTYLCGFIKQKLALGGSIAVKITEHS--W-NADLYKLMGHFSWWTAFV-TNVNASSSEAFLIGANYLG 259 (344)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSSS--C-CHHHHHHHTTEEEEEEEE-EGGGTTSSCEEEEEEEECS
T ss_pred HHHHHHHHHHHhCcCCCEEEEEEecCC--C-HHHHHHHHhhCCeEEEEC-CCCCCCCeeEEEEeeeccC
Confidence 777777889999999999999999995 4 466778888999999997 6999999999999999986
No 20
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.83 E-value=4e-19 Score=166.05 Aligned_cols=179 Identities=26% Similarity=0.313 Sum_probs=143.6
Q ss_pred cchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCc
Q psy13508 280 PFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDD 359 (621)
Q Consensus 280 ~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~ 359 (621)
+|++|+++||.++.+.+.. ++++. +|||+|||+|+++.++..+.++.++++|+|+.+...
T Consensus 1 ~y~~r~~~~l~~~~~~~~~-------------~~~~~--~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----- 60 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKL-------------FKPGM--TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----- 60 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCC-------------CCTTC--EEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC-----
T ss_pred CcchhHHHHHHHHHHHhCC-------------CCCCC--eEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc-----
Confidence 5899999999999999986 35565 899999999999999988766668999999975110
Q ss_pred ccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhc
Q psy13508 360 FFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFI 438 (621)
Q Consensus 360 ~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~ 438 (621)
. ..+ ...+|+.+....+.+...+ ....+|+|++|+.+...+....++.....+....+..+.++
T Consensus 61 ---~--------~~~~~~~~d~~~~~~~~~~~~~~----~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 125 (180)
T 1ej0_A 61 ---I--------VGVDFLQGDFRDELVMKALLERV----GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDV 125 (180)
T ss_dssp ---C--------TTEEEEESCTTSHHHHHHHHHHH----TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---c--------CcEEEEEcccccchhhhhhhccC----CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHH
Confidence 0 112 3578998876555554432 45689999999999888887777665555555556678899
Q ss_pred cCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCC
Q psy13508 439 VRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 439 Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
|+|||.+++..+.... ...++..+...|..+.+++|.++|..+.|.|+||+|+++
T Consensus 126 L~~gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 126 LAPGGSFVVKVFQGEG--FDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp EEEEEEEEEEEESSTT--HHHHHHHHHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred cCCCcEEEEEEecCCc--HHHHHHHHHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 9999999999998744 667888888899999999999999999999999999974
No 21
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.77 E-value=2.2e-19 Score=180.82 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=98.3
Q ss_pred ccccccc-c-cccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCCh-h--hhHHHHHHHHHHHHHHHHHhcCCCC
Q psy13508 44 NVLQCVK-G-NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQE-N--IQEILSKRLYLCQFLVSLFIVRPEG 118 (621)
Q Consensus 44 ~~~~~v~-~-~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~-~--~d~~~~~~L~l~~l~~A~~~L~~gG 118 (621)
.|++|++ . ++||+++.++ +++|+|+||||||.+|++ . .||.+...| ++.+|+.+|+|||
T Consensus 185 ~Pi~GAt~~~~lDfg~p~~~-------------~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGG 248 (320)
T 2hwk_A 185 SDRPEATFRARLDLGIPGDV-------------PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGG 248 (320)
T ss_dssp ESSTTCSEECCGGGCSCTTS-------------CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEE
T ss_pred ccCCCceeecccccCCcccc-------------CcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCc
Confidence 4678887 4 8999998743 469999999999999999 8 999887555 7899999999999
Q ss_pred EEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCCCC
Q psy13508 119 HFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 119 ~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~~~ 170 (621)
+||+|+|+|..-.+.+++..+++.|++|+..||++||. |+|.|+++.+++.
T Consensus 249 tfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StEvf~La~gf~g 299 (320)
T 2hwk_A 249 TCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETEVLFVFIGYDR 299 (320)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTCEEEEEEEECC
T ss_pred eEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cceEEEEEEeecC
Confidence 99999999953358999999999999999999999999 9999999998875
No 22
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.74 E-value=2.2e-18 Score=173.52 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=97.8
Q ss_pred ccccCCC-cc-cccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCch-h--hHHHHHHHHHHHHHHhhhhccCCC
Q psy13508 368 FEPYYGV-KG-NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQE-N--IQEILSKRLYLCQFLVSLFIVRPE 442 (621)
Q Consensus 368 ~~~~~Gv-~~-~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~-~--~de~~~~~L~l~~l~~al~~Lr~G 442 (621)
|.|+.|+ .. ++|++++.++ +++|+|+|||+++.+|.+ . .|+....+| .+-+|+.+|+||
T Consensus 184 i~Pi~GAt~~~~lDfg~p~~~-------------~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPG 247 (320)
T 2hwk_A 184 LSDRPEATFRARLDLGIPGDV-------------PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPG 247 (320)
T ss_dssp EESSTTCSEECCGGGCSCTTS-------------CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEE
T ss_pred eccCCCceeecccccCCcccc-------------CcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCC
Confidence 4456676 33 8999987643 569999999999999999 7 777755444 566999999999
Q ss_pred cEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCch
Q psy13508 443 GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCD 498 (621)
Q Consensus 443 G~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~ 498 (621)
|+||||+|++.+..+..++..|.+.|++|+++||.+||. |+|.|+|++||+++..
T Consensus 248 GtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StEvf~La~gf~g~~r 302 (320)
T 2hwk_A 248 GTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETEVLFVFIGYDRKAR 302 (320)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTCEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cceEEEEEEeecCCcc
Confidence 999999999974458899999999999999999999999 9999999999998654
No 23
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.59 E-value=2.3e-15 Score=148.95 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=105.5
Q ss_pred CchhHhhhhhCCCCCCceeeccccccccc----------cccc-ccc-cCCChHhHHHHHHHHHhhcCCCcccEEEecCC
Q psy13508 18 DSWIVEGDKKLSIDNETKFCSPNLLKNVL----------QCVK-GNG-DVYDPENILSLHEFVMKSSKGRGVHFMMADGG 85 (621)
Q Consensus 18 ~~W~Qva~~~~~~~~~~~~~~~~l~~~~~----------~~v~-~~G-Di~~~~~~~~l~~~~~~~~~~~~~dlVlsDga 85 (621)
-||+||++.+.+.. .|++-|...+... +.|+ .+| |+.. +...++|+||||||
T Consensus 90 GGWSq~~a~~~g~~--~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~--------------~~~~~~DtllcDIg 153 (267)
T 3p8z_A 90 GGWSYYCAGLKKVT--EVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFY--------------LPPEKCDTLLCDIG 153 (267)
T ss_dssp SHHHHHHHTSTTEE--EEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGG--------------CCCCCCSEEEECCC
T ss_pred CcHHHHHHHhcCCC--EEEEEecCCCCccCcchhhhcCcCceEEEeccceee--------------cCCccccEEEEecC
Confidence 38999999998874 5777776666433 4556 588 9832 13468999999999
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecc
Q psy13508 86 FSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVC 165 (621)
Q Consensus 86 pn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~ 165 (621)
| .+|++..|+.++ |. .|.+|.++|++ |+|+||||++..|...+++..|++.|..+...||. ||.++.|+|++.
T Consensus 154 e-Ss~~~~vE~~Rt--lr--vLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~Vs 226 (267)
T 3p8z_A 154 E-SSPSPTVEESRT--IR--VLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWIS 226 (267)
T ss_dssp C-CCSCHHHHHHHH--HH--HHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEES
T ss_pred C-CCCChhhhhhHH--HH--HHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 9 999999999775 33 78999999999 89999999998777889999999999999999999 999999999984
Q ss_pred c
Q psy13508 166 K 166 (621)
Q Consensus 166 ~ 166 (621)
.
T Consensus 227 g 227 (267)
T 3p8z_A 227 N 227 (267)
T ss_dssp S
T ss_pred c
Confidence 3
No 24
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.57 E-value=3.5e-15 Score=154.66 Aligned_cols=145 Identities=10% Similarity=-0.012 Sum_probs=110.5
Q ss_pred CCCCCcceEEEecc------CCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-c-ccccCCCh
Q psy13508 312 LGPGELLYFADVCA------GPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-K-GNGDVYDP 383 (621)
Q Consensus 312 ~~~g~~~~vlDLca------aPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~-~~GDI~~~ 383 (621)
+++|+ +|||||| |||+ +++.++.+..++++|+|+.+. + .++ . .+||+++.
T Consensus 61 l~~g~--~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~----v--------------~~v~~~i~gD~~~~ 118 (290)
T 2xyq_A 61 VPYNM--RVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF----V--------------SDADSTLIGDCATV 118 (290)
T ss_dssp CCTTC--EEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC----B--------------CSSSEEEESCGGGC
T ss_pred CCCCC--EEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC----C--------------CCCEEEEECccccC
Confidence 46676 8999999 9999 777776665789999999853 1 123 4 68898753
Q ss_pred hhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHH
Q psy13508 384 ENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYL 463 (621)
Q Consensus 384 ~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~ 463 (621)
. + ...+|+|+||+.++.+|.+..++.....+....+..+.++|||||.|++|+|.... ..++...
T Consensus 119 ~------------~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--~~~l~~~ 183 (290)
T 2xyq_A 119 H------------T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--NADLYKL 183 (290)
T ss_dssp C------------C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--CHHHHHH
T ss_pred C------------c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--HHHHHHH
Confidence 2 1 25799999999988877665544322233444556889999999999999999754 4688899
Q ss_pred HHhc-cceeEeecCCCCCCCCceEEEEEeecCCC
Q psy13508 464 LYRS-YKQVCIFKPNTSRPANSERYIVCKWKRPD 496 (621)
Q Consensus 464 l~~~-F~~V~i~KP~aSR~~ssE~YlVc~g~~~~ 496 (621)
++.+ |..|.++ +||+.|+|.|+||+||++.
T Consensus 184 l~~~GF~~v~~~---asr~~s~e~~lv~~~~~~~ 214 (290)
T 2xyq_A 184 MGHFSWWTAFVT---NVNASSSEAFLIGANYLGK 214 (290)
T ss_dssp HTTEEEEEEEEE---GGGTTSSCEEEEEEEECSS
T ss_pred HHHcCCcEEEEE---EcCCCchheEEecCCccCC
Confidence 9998 9998888 8999999999999999975
No 25
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.57 E-value=1.5e-17 Score=176.49 Aligned_cols=108 Identities=14% Similarity=0.030 Sum_probs=76.1
Q ss_pred cccCCCcchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC
Q psy13508 274 RENGNGPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH 353 (621)
Q Consensus 274 ~~~~~~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~ 353 (621)
|.....+..|||+|||.|+...|....... ..+++|+ ++||||||||||||++++| .++|+|||+.+.+
T Consensus 177 rl~~~~~~pSRa~lKL~Ea~~~F~~~~~~~------~~l~~G~--~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~ 245 (375)
T 4auk_A 177 RLKFPADAPSRSTLKLEEAFHVFIPADEWD------ERLANGM--WAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA 245 (375)
T ss_dssp CCCCCTTSSCTTHHHHHHHHHHHSCGGGHH------HHSCTTC--EEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC
T ss_pred cccCCCCCCCHHHHHHHHHHHhccchhhhh------ccCCCCC--EEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC
Confidence 344456789999999999999985421100 1257887 8999999999999999986 5899999987532
Q ss_pred CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCc
Q psy13508 354 DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQ 416 (621)
Q Consensus 354 ~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~ 416 (621)
+ . .....+| ..++|.+... .....+|+|+|||+++.++.
T Consensus 246 ~-----~-------l~~~~~V~~~~~d~~~~~------------~~~~~~D~vvsDm~~~p~~~ 285 (375)
T 4auk_A 246 Q-----S-------LMDTGQVTWLREDGFKFR------------PTRSNISWMVCDMVEKPAKV 285 (375)
T ss_dssp H-----H-------HHTTTCEEEECSCTTTCC------------CCSSCEEEEEECCSSCHHHH
T ss_pred h-----h-------hccCCCeEEEeCcccccc------------CCCCCcCEEEEcCCCChHHh
Confidence 1 0 0012234 5678877522 12467999999999977543
No 26
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.49 E-value=1.5e-13 Score=132.62 Aligned_cols=146 Identities=17% Similarity=0.171 Sum_probs=112.8
Q ss_pred chhHhhhhhCCCCCCceeeccccccccccccc-ccccCCChH-----------------hHHHHHHHHHhhcCCCcccEE
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLKNVLQCVK-GNGDVYDPE-----------------NILSLHEFVMKSSKGRGVHFM 80 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~~~~~~v~-~~GDi~~~~-----------------~~~~l~~~~~~~~~~~~~dlV 80 (621)
+|++.++++++.....+++.|.-.+....+++ .+||+++.. ....+.+. +....+|+|
T Consensus 35 ~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~fD~v 110 (201)
T 2plw_A 35 SWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEI----LQDKKIDII 110 (201)
T ss_dssp HHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHHH----HTTCCEEEE
T ss_pred HHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHhh----cCCCcccEE
Confidence 68888888876312356777766665566776 799998864 23333222 245689999
Q ss_pred EecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCce
Q psy13508 81 MADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSE 160 (621)
Q Consensus 81 lsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E 160 (621)
+||++++.+|.+..|+..+..+....+..+.++|+|||.||+++|++. ....++..++..|..+..+||.++|+.+.|
T Consensus 111 ~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e 188 (201)
T 2plw_A 111 LSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS--QTNNLKTYLKGMFQLVHTTKPKASRNESRE 188 (201)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--THHHHHHHHHTTEEEEEECCCC-----CCE
T ss_pred EeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC--CHHHHHHHHHHHHheEEEECCcccCCcCce
Confidence 999999999999888877766767777889999999999999999984 678899999999999999999999999999
Q ss_pred eeecccCCCC
Q psy13508 161 RYIVCKWKRP 170 (621)
Q Consensus 161 ~y~v~~~~~~ 170 (621)
.|++|.+++.
T Consensus 189 ~y~v~~~~~~ 198 (201)
T 2plw_A 189 IYLVCKNFLG 198 (201)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEecCcc
Confidence 9999998764
No 27
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.46 E-value=1.7e-13 Score=139.74 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=104.2
Q ss_pred CchhHhhhhhCCCCCCceeeccccccccc----------cccc-ccc-cCCChHhHHHHHHHHHhhcCCCcccEEEecCC
Q psy13508 18 DSWIVEGDKKLSIDNETKFCSPNLLKNVL----------QCVK-GNG-DVYDPENILSLHEFVMKSSKGRGVHFMMADGG 85 (621)
Q Consensus 18 ~~W~Qva~~~~~~~~~~~~~~~~l~~~~~----------~~v~-~~G-Di~~~~~~~~l~~~~~~~~~~~~~dlVlsDga 85 (621)
-||+||++.+.+.. .|++-|....... ..|+ .+| ||..- ...++|+|+||+|
T Consensus 106 GGwsq~~~~~~gv~--~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l--------------~~~~~D~ivcDig 169 (321)
T 3lkz_A 106 GGWCYYMATQKRVQ--EVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYR--------------PSECCDTLLCDIG 169 (321)
T ss_dssp CHHHHHHTTCTTEE--EEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSS--------------CCCCCSEEEECCC
T ss_pred CcHHHHHHhhcCCC--EEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhC--------------CCCCCCEEEEECc
Confidence 38999999988774 4666665554111 2344 566 87542 2357999999999
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHHHHhcCCC-CEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeec
Q psy13508 86 FSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 164 (621)
Q Consensus 86 pn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~g-G~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v 164 (621)
..+|++..|+.++ |. .|.+|.++|++| |+|+||||++..++..+++..|++.|..+...||. ||.++.|+|.+
T Consensus 170 -eSs~~~~ve~~Rt--l~--vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~v 243 (321)
T 3lkz_A 170 -ESSSSAEVEEHRT--IR--VLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWV 243 (321)
T ss_dssp -CCCSCHHHHHHHH--HH--HHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEE
T ss_pred -cCCCChhhhhhHH--HH--HHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEE
Confidence 9999999999775 33 789999999999 99999999998888889999999999999999999 99999999997
Q ss_pred cc
Q psy13508 165 CK 166 (621)
Q Consensus 165 ~~ 166 (621)
.-
T Consensus 244 sG 245 (321)
T 3lkz_A 244 SR 245 (321)
T ss_dssp TT
T ss_pred ec
Confidence 54
No 28
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=4e-13 Score=128.88 Aligned_cols=146 Identities=23% Similarity=0.267 Sum_probs=111.2
Q ss_pred chhHhhhhhCCCC-------CCceeeccccccccccccc-c-cccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCC
Q psy13508 19 SWIVEGDKKLSID-------NETKFCSPNLLKNVLQCVK-G-NGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE 89 (621)
Q Consensus 19 ~W~Qva~~~~~~~-------~~~~~~~~~l~~~~~~~v~-~-~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~s 89 (621)
.|+...+++++.. ...+++.|.-.+..+..+. . ++|+++....+.+.+. +.+.++|+|+||++|+++
T Consensus 35 ~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~fD~V~~~~~~~~~ 110 (196)
T 2nyu_A 35 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEV----LPGRRADVILSDMAPNAT 110 (196)
T ss_dssp HHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHH----SGGGCEEEEEECCCCCCC
T ss_pred HHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHh----cCCCCCcEEEeCCCCCCC
Confidence 5778888887641 1467777766665556666 7 8999987665555443 344579999999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCCC
Q psy13508 90 GQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKR 169 (621)
Q Consensus 90 G~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~~ 169 (621)
|.+..|+..+..+....+..+.++|+|||.||+++|.+. ....++..++..|..+..+||.++|+.+.|.|++|.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~ 188 (196)
T 2nyu_A 111 GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS--QSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQYH 188 (196)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG--GGHHHHHHHHHHEEEEEEECCC--------EEEEEEEEC
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc--cHHHHHHHHHHHhcceEEECCcccCccCceEEEEeeecC
Confidence 999999877766767777889999999999999999884 678889999999999999999999999999999999987
Q ss_pred C
Q psy13508 170 P 170 (621)
Q Consensus 170 ~ 170 (621)
.
T Consensus 189 ~ 189 (196)
T 2nyu_A 189 G 189 (196)
T ss_dssp C
T ss_pred C
Confidence 5
No 29
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.43 E-value=6.5e-13 Score=138.62 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=104.4
Q ss_pred chhHhhhhhCCCCCCceeeccc-----------cccccc--cccc-ccc-cCCChHhHHHHHHHHHhhcCCCcccEEEec
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPN-----------LLKNVL--QCVK-GNG-DVYDPENILSLHEFVMKSSKGRGVHFMMAD 83 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~-----------l~~~~~--~~v~-~~G-Di~~~~~~~~l~~~~~~~~~~~~~dlVlsD 83 (621)
+|+|+++++ + .+++.|. ..+..+ ++++ .+| |+++.. ..++|+|+||
T Consensus 95 ~~s~~la~~-~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--------------~~~fD~V~sd 155 (305)
T 2p41_A 95 GWSYYCGGL-K----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--------------PERCDTLLCD 155 (305)
T ss_dssp HHHHHHHTS-T----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--------------CCCCSEEEEC
T ss_pred HHHHHHHhc-C----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--------------cCCCCEEEEC
Confidence 699999988 1 3444332 112222 4566 578 877522 2479999999
Q ss_pred CCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeee
Q psy13508 84 GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYI 163 (621)
Q Consensus 84 gapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~ 163 (621)
++++ +|++..|+..+ + ..+..+.++|+|||.||+|+|.+.++.+..++..+++.|..|...|| +||..|.|.|+
T Consensus 156 ~~~~-~g~~~~d~~~~--l--~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~ 229 (305)
T 2p41_A 156 IGES-SPNPTVEAGRT--L--RVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYW 229 (305)
T ss_dssp CCCC-CSSHHHHHHHH--H--HHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEE
T ss_pred Cccc-cCcchhhHHHH--H--HHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHH
Confidence 9999 99999888654 2 35677889999999999999999766678899999999999999999 99999999999
Q ss_pred cccCCCCCchhHHHHH
Q psy13508 164 VCKWKRPDCDTIRDFM 179 (621)
Q Consensus 164 v~~~~~~~~d~L~~wL 179 (621)
+|.++....+....+.
T Consensus 230 v~~~~~~~~~~~~t~~ 245 (305)
T 2p41_A 230 VSNASGNIVSSVNMIS 245 (305)
T ss_dssp ETTCCCCHHHHHHHHH
T ss_pred HHhccCCcccchhHHH
Confidence 9999986444444443
No 30
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.37 E-value=2e-12 Score=132.29 Aligned_cols=127 Identities=12% Similarity=0.033 Sum_probs=100.0
Q ss_pred chhHhhhhhCCCCCCceeecccccc------cccc------ccc-c--cccCCChHhHHHHHHHHHhhcCCCcccEEEec
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLK------NVLQ------CVK-G--NGDVYDPENILSLHEFVMKSSKGRGVHFMMAD 83 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~------~~~~------~v~-~--~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsD 83 (621)
+|+|+++++ +.+++.|...| .++. ++. + +||+++- ...++|+|+||
T Consensus 87 ~~s~~la~~-----~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l--------------~~~~fD~V~sd 147 (265)
T 2oxt_A 87 GWSYYAASR-----PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTL--------------PVERTDVIMCD 147 (265)
T ss_dssp HHHHHHHTS-----TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTS--------------CCCCCSEEEEC
T ss_pred HHHHHHHHc-----CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHC--------------CCCCCcEEEEe
Confidence 799999987 34676666555 3443 455 6 8999871 24579999999
Q ss_pred CCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCC--EEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCcee
Q psy13508 84 GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEG--HFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSER 161 (621)
Q Consensus 84 gapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG--~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~ 161 (621)
++ +++|++..|+..+ +. .+..+.++|+||| .||+|+|+...+...++++.+++.|..|...| .+||++|.|.
T Consensus 148 ~~-~~~~~~~~d~~~~--l~--~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~ 221 (265)
T 2oxt_A 148 VG-ESSPKWSVESERT--IK--ILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEM 221 (265)
T ss_dssp CC-CCCSCHHHHHHHH--HH--HHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCE
T ss_pred Cc-ccCCccchhHHHH--HH--HHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccE
Confidence 99 9999999888654 22 5677889999999 99999999532222288899999999999999 7899999999
Q ss_pred eecccCCCC
Q psy13508 162 YIVCKWKRP 170 (621)
Q Consensus 162 y~v~~~~~~ 170 (621)
|++|.++..
T Consensus 222 y~v~~~~~~ 230 (265)
T 2oxt_A 222 YFTSRAGGN 230 (265)
T ss_dssp EEESSCCSC
T ss_pred EEEecCCCC
Confidence 999976654
No 31
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=6.3e-12 Score=129.36 Aligned_cols=144 Identities=15% Similarity=0.063 Sum_probs=105.0
Q ss_pred chhHhhhhhCCCCCCceeecccccc------cccc------ccc-c--cccCCChHhHHHHHHHHHhhcCCCcccEEEec
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLK------NVLQ------CVK-G--NGDVYDPENILSLHEFVMKSSKGRGVHFMMAD 83 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~------~~~~------~v~-~--~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsD 83 (621)
+|+|+++++ +.+++.|...| .++. +++ . +||+++ +...++|+|+||
T Consensus 95 ~~s~~la~~-----~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--------------l~~~~fD~Vvsd 155 (276)
T 2wa2_A 95 SWSYYAASQ-----PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK--------------MEPFQADTVLCD 155 (276)
T ss_dssp HHHHHHHTS-----TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGG--------------CCCCCCSEEEEC
T ss_pred HHHHHHHHc-----CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhh--------------CCCCCcCEEEEC
Confidence 699999887 24666666555 3333 444 6 888875 124579999999
Q ss_pred CCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCC--EEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCcee
Q psy13508 84 GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEG--HFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSER 161 (621)
Q Consensus 84 gapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG--~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~ 161 (621)
++ +++|++..|+..+ +. .+..+.++|+||| .||+|+|+...+...++++.+++.|..+... |.+||..|.|.
T Consensus 156 ~~-~~~~~~~~d~~~~--l~--~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~ 229 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRT--LT--VLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEM 229 (276)
T ss_dssp CC-CCCSCHHHHHHHH--HH--HHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCE
T ss_pred CC-cCCCchhhhHHHH--HH--HHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchhe
Confidence 99 9999999888654 22 5677889999999 9999999953222237888999999999999 99999999999
Q ss_pred eecccCCCCCchhHHHHHHHHHHhhh
Q psy13508 162 YIVCKWKRPDCDTIRDFMFKLNKRLD 187 (621)
Q Consensus 162 y~v~~~~~~~~d~L~~wL~~~nkkl~ 187 (621)
|++|.+.......+........++|.
T Consensus 230 y~v~~~~~~~~~~~~~~~~~l~~r~~ 255 (276)
T 2wa2_A 230 YFVSGIKNNIMGNVTAVSRQLLKRME 255 (276)
T ss_dssp EEESSCCCCHHHHHHHHHHHHHHHHC
T ss_pred EEecccCCCcchhHHHHHHHHHHHhh
Confidence 99998765433333333333334443
No 32
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.02 E-value=1.4e-10 Score=120.13 Aligned_cols=128 Identities=9% Similarity=-0.043 Sum_probs=96.2
Q ss_pred HhhhhhCCCCCCceeecccccccccccc-c-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHH
Q psy13508 22 VEGDKKLSIDNETKFCSPNLLKNVLQCV-K-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILS 99 (621)
Q Consensus 22 Qva~~~~~~~~~~~~~~~~l~~~~~~~v-~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~ 99 (621)
++++++++. .+.+++.|.-.. +.++ . ++||+++... ...+|+|+|||+|+.+|.+..|+...
T Consensus 83 ~~~a~~~~~-~~~V~gvDis~~--v~~v~~~i~gD~~~~~~-------------~~~fD~Vvsn~~~~~~g~~~~d~~~~ 146 (290)
T 2xyq_A 83 AVLRQWLPT-GTLLVDSDLNDF--VSDADSTLIGDCATVHT-------------ANKWDLIISDMYDPRTKHVTKENDSK 146 (290)
T ss_dssp HHHHHHSCT-TCEEEEEESSCC--BCSSSEEEESCGGGCCC-------------SSCEEEEEECCCCCC---CCSCCCCC
T ss_pred HHHHHHcCC-CCEEEEEECCCC--CCCCEEEEECccccCCc-------------cCcccEEEEcCCccccccccccccch
Confidence 666666654 345666655554 4444 3 5888876321 24799999999999999887776554
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEecCCCCCCCCceeeecccCCCC
Q psy13508 100 KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFKPNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 100 ~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~KP~aSR~~s~E~y~v~~~~~~ 170 (621)
..+....+..|.++|+|||.|++|+|.+. ...++...+++. |..|..+ +||+.|+|.|++|.+++.
T Consensus 147 ~~l~~~~l~~a~r~LkpGG~~v~~~~~~~--~~~~l~~~l~~~GF~~v~~~---asr~~s~e~~lv~~~~~~ 213 (290)
T 2xyq_A 147 EGFFTYLCGFIKQKLALGGSIAVKITEHS--WNADLYKLMGHFSWWTAFVT---NVNASSSEAFLIGANYLG 213 (290)
T ss_dssp CTHHHHHHHHHHHHEEEEEEEEEEECSSS--CCHHHHHHHTTEEEEEEEEE---GGGTTSSCEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccC--CHHHHHHHHHHcCCcEEEEE---EcCCCchheEEecCCccC
Confidence 44555677889999999999999999985 567899999998 9998888 799999999999998774
No 33
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.00 E-value=3.7e-09 Score=97.99 Aligned_cols=145 Identities=22% Similarity=0.224 Sum_probs=110.2
Q ss_pred chhHhhhhhCCCCCCceeeccccccccccccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHH
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLKNVLQCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEI 97 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~~~~~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~ 97 (621)
.|+....+.++.+ ..+++.|.-.+..+..++ .++|+.+....+.+.+.+ ....+|+|++|+.....+.+..|+.
T Consensus 35 ~~~~~l~~~~~~~-~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~~~~D~i~~~~~~~~~~~~~~~~~ 109 (180)
T 1ej0_A 35 GWSQYVVTQIGGK-GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV----GDSKVQVVMSDMAPNMSGTPAVDIP 109 (180)
T ss_dssp HHHHHHHHHHCTT-CEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHH----TTCCEEEEEECCCCCCCSCHHHHHH
T ss_pred HHHHHHHHHhCCC-CeEEEEECccccccCcEEEEEcccccchhhhhhhccC----CCCceeEEEECCCccccCCCccchH
Confidence 3555555655332 234443333344445565 689999876555554433 4568999999999999999988887
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeecccCCCC
Q psy13508 98 LSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 170 (621)
Q Consensus 98 ~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v~~~~~~ 170 (621)
....+....+..+.++|+|||.+++..+... ....+...++..|+.+...+|..+|..+.|.|++|.+++|
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 110 RAMYLVELALEMCRDVLAPGGSFVVKVFQGE--GFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEESST--THHHHHHHHHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEEEEecCC--cHHHHHHHHHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 6666666667778899999999999999884 6788888999999999999999999999999999998764
No 34
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.93 E-value=6e-10 Score=115.33 Aligned_cols=202 Identities=13% Similarity=0.048 Sum_probs=117.7
Q ss_pred hccCcchhc--ccccccc-h-hhhhhc-cccccccccCCccccccCC-CcchhhHHHHHHHHHHhcCcCCCCcccCCCCC
Q psy13508 237 NRSNPFELI--KNGPFLN-R-AAMKMA-NMDKRLNSMFTQPVRENGN-GPFLNRAAMKMANMDKRLNSMFTQPVRENGSP 310 (621)
Q Consensus 237 ~r~np~e~~--~~~~f~n-r-aa~K~a-~id~~~~~~~~~~~~~~~~-~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~ 310 (621)
||+..-++| |.+...+ + ...|.+ .++. ++.+...+. ..|+||+++||.++++.|++-
T Consensus 21 SR~~a~~lI~~G~V~Vng~~~~v~kp~~~V~~------~d~I~v~g~~~~yvsrg~~Kl~~~l~~~~~~----------- 83 (291)
T 3hp7_A 21 TREQAKRGVMAGLVVNVINGERYDKPGEKIDD------GTELKLKGEKLRYVSRGGLKLEKALAVFNLS----------- 83 (291)
T ss_dssp SHHHHHHHHHTTCEEETTTCCBCCCTTCEEET------TCCEEETTCCCCSSSTTHHHHHHHHHHTTCC-----------
T ss_pred cHHHHHHHHHCCeEEECCeEEEEccCCCCCCC------CCEEEEcccccccccchHHHHHHHHHhcCCC-----------
Confidence 444445555 4455444 4 456666 5555 556666554 479999999999999999872
Q ss_pred CCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHH
Q psy13508 311 LLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLH 390 (621)
Q Consensus 311 ~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~ 390 (621)
.+|. ++||+|||+|+|+.+++.+ ..++++|+|+.+.- +..-.... ..... ....|+.....
T Consensus 84 --~~g~--~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~m---L~~a~r~~-~rv~~----~~~~ni~~l~~----- 144 (291)
T 3hp7_A 84 --VEDM--ITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQ---LVWKLRQD-DRVRS----MEQYNFRYAEP----- 144 (291)
T ss_dssp --CTTC--EEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSC---SCHHHHTC-TTEEE----ECSCCGGGCCG-----
T ss_pred --cccc--EEEecCCCccHHHHHHHhC--CCCEEEEEECCHHH---HHHHHHhC-cccce----ecccCceecch-----
Confidence 2344 8999999999999999875 35699999997521 10000000 00000 01123321110
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE---EccCCC-------C-----
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK---VFDMFT-------P----- 455 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K---~F~~~~-------~----- 455 (621)
..+....+|+|++|.++.. .. .. +....++|+|||.||+= -|.... +
T Consensus 145 ----~~l~~~~fD~v~~d~sf~s-----l~------~v---L~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~ 206 (291)
T 3hp7_A 145 ----VDFTEGLPSFASIDVSFIS-----LN------LI---LPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESS 206 (291)
T ss_dssp ----GGCTTCCCSEEEECCSSSC-----GG------GT---HHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHH
T ss_pred ----hhCCCCCCCEEEEEeeHhh-----HH------HH---HHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHH
Confidence 0112234999999998742 11 11 22456899999999985 243210 1
Q ss_pred ----ChHHHHHHHHhc-cceeE-eecCCCCCCCCceEEEEEee
Q psy13508 456 ----FSAGLLYLLYRS-YKQVC-IFKPNTSRPANSERYIVCKW 492 (621)
Q Consensus 456 ----~s~~ll~~l~~~-F~~V~-i~KP~aSR~~ssE~YlVc~g 492 (621)
.-.++...+... |.-.. ..-|..-...|-|..+.++.
T Consensus 207 ~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 207 IHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 001123333333 54333 34566677889998877765
No 35
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.86 E-value=1.3e-08 Score=102.00 Aligned_cols=167 Identities=11% Similarity=0.093 Sum_probs=99.3
Q ss_pred CcchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCC
Q psy13508 279 GPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLD 358 (621)
Q Consensus 279 ~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~ 358 (621)
..++++-+.++++..+.++ +++|+ +|||||||||+|+.++..+.++.++++|+|+.+.. +.
T Consensus 55 ~~~~skla~~ll~~l~~~~--------------l~~g~--~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~---l~ 115 (232)
T 3id6_C 55 NAFRSKLAGAILKGLKTNP--------------IRKGT--KVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRV---VR 115 (232)
T ss_dssp CTTTCHHHHHHHTTCSCCS--------------CCTTC--EEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHH---HH
T ss_pred chHHHHHHHHHHhhhhhcC--------------CCCCC--EEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHH---HH
Confidence 4578888888887544443 36787 89999999999999999988888999999997521 00
Q ss_pred cccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhh
Q psy13508 359 DFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 437 (621)
Q Consensus 359 ~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~ 437 (621)
.+.... ....++ ...||++.+..... -...+|+|++|+++ ++..+ +. ...+..
T Consensus 116 ~l~~~a----~~r~nv~~i~~Da~~~~~~~~---------~~~~~D~I~~d~a~-----~~~~~-----il---~~~~~~ 169 (232)
T 3id6_C 116 ELLLVA----QRRPNIFPLLADARFPQSYKS---------VVENVDVLYVDIAQ-----PDQTD-----IA---IYNAKF 169 (232)
T ss_dssp HHHHHH----HHCTTEEEEECCTTCGGGTTT---------TCCCEEEEEECCCC-----TTHHH-----HH---HHHHHH
T ss_pred HHHHHh----hhcCCeEEEEcccccchhhhc---------cccceEEEEecCCC-----hhHHH-----HH---HHHHHH
Confidence 000000 001122 45788887543211 13579999999875 11111 11 113445
Q ss_pred ccCCCcEEEEEEccCC-------CCChHHHHHHHHh-ccceeEeecCCCCCCCCceEEEEEee
Q psy13508 438 IVRPEGHFVCKVFDMF-------TPFSAGLLYLLYR-SYKQVCIFKPNTSRPANSERYIVCKW 492 (621)
Q Consensus 438 ~Lr~GG~fV~K~F~~~-------~~~s~~ll~~l~~-~F~~V~i~KP~aSR~~ssE~YlVc~g 492 (621)
.|||||.||+-+.... +......+..|.. -|+-+.......- .....++||+.
T Consensus 170 ~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~--~~~h~~v~~~~ 230 (232)
T 3id6_C 170 FLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPY--DKDHAIVLSKY 230 (232)
T ss_dssp HEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTT--CSSCEEEEEEE
T ss_pred hCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCC--cCceEEEEEEe
Confidence 8999999998764432 1112344455554 3766665543211 22556666653
No 36
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.43 E-value=1.6e-07 Score=94.68 Aligned_cols=158 Identities=10% Similarity=0.054 Sum_probs=91.0
Q ss_pred CCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC-C-cccccCCChhhHHHH
Q psy13508 314 PGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG-V-KGNGDVYDPENILSL 389 (621)
Q Consensus 314 ~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G-v-~~~GDI~~~~~~~~l 389 (621)
++. +|||+|||+|+++..+..+. .++++|+|+.+.. .....+++. ...+ + ...||+.+...
T Consensus 49 ~~~--~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~-------~~~a~~n~~~~~~~~~v~~~~~D~~~~~~---- 113 (259)
T 3lpm_A 49 RKG--KIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERL-------ADMAKRSVAYNQLEDQIEIIEYDLKKITD---- 113 (259)
T ss_dssp SCC--EEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHH-------HHHHHHHHHHTTCTTTEEEECSCGGGGGG----
T ss_pred CCC--EEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHH-------HHHHHHHHHHCCCcccEEEEECcHHHhhh----
Confidence 455 89999999999999998763 3499999987520 000000000 0011 2 35678775321
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCC---CchhhHHHHH-----HHHHHHHH-HhhhhccCCCcEEEEEEccCCCCChHHH
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVE---GQENIQEILS-----KRLYLCQF-LVSLFIVRPEGHFVCKVFDMFTPFSAGL 460 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~---G~~~~de~~~-----~~L~l~~l-~~al~~Lr~GG~fV~K~F~~~~~~s~~l 460 (621)
.+....+|+|+||..+... |..+.++... ....+.++ ..+..+|+|||.|++ ++... ...++
T Consensus 114 ------~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~--~~~~~ 184 (259)
T 3lpm_A 114 ------LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPE--RLLDI 184 (259)
T ss_dssp ------TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTT--THHHH
T ss_pred ------hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHH--HHHHH
Confidence 1235689999998654332 2222211100 01222333 378889999999999 44433 35677
Q ss_pred HHHHHhccceeEeecCCCCCCCCceEEEEEeecCC
Q psy13508 461 LYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 461 l~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
+..+....-.+...+|..+|+.....+++....++
T Consensus 185 ~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 185 IDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp HHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred HHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 78888765555666666677777666676666654
No 37
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.35 E-value=3.8e-07 Score=91.12 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=46.9
Q ss_pred CcchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 279 GPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 279 ~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
..|++|+.+||.++.+.+.+- .++. ++||||||+|+|+.+++.+ ...+++|+|+.+
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~-------------~~g~--~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~ 70 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLE-------------INGK--TCLDIGSSTGGFTDVMLQN--GAKLVYALDVGT 70 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCC-------------CTTC--EEEEETCTTSHHHHHHHHT--TCSEEEEECSSC
T ss_pred CCccCCcHHHHHHHHHHcCCC-------------CCCC--EEEEEccCCCHHHHHHHhc--CCCEEEEEcCCH
Confidence 479999999999999999762 2344 8999999999999999875 235999999985
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.30 E-value=5.4e-06 Score=78.30 Aligned_cols=155 Identities=9% Similarity=0.031 Sum_probs=79.0
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~ 388 (621)
+++|. +|||+|||+|.++.++..+ .++++|+|+.+. ++....+... ....+ ...+|+.+..
T Consensus 20 ~~~~~--~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~-------~l~~a~~~~~~~~~~~v~~~~~~~~~l~---- 83 (185)
T 3mti_A 20 LDDES--IVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQ-------ALGKTSQRLSDLGIENTELILDGHENLD---- 83 (185)
T ss_dssp CCTTC--EEEESCCTTSHHHHHHHTT---SSEEEEEESCHH-------HHHHHHHHHHHHTCCCEEEEESCGGGGG----
T ss_pred CCCCC--EEEEEcCCCCHHHHHHHHh---CCEEEEEECCHH-------HHHHHHHHHHHcCCCcEEEEeCcHHHHH----
Confidence 35666 8999999999999999875 689999998752 0000000000 00011 1233433211
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCC---hHHHHHHHH
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPF---SAGLLYLLY 465 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~---s~~ll~~l~ 465 (621)
. .....+|+|+++.+.-..+....... .......+..+.++|||||.|++-+|.+.... ...+...+.
T Consensus 84 ------~-~~~~~fD~v~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 154 (185)
T 3mti_A 84 ------H-YVREPIRAAIFNLGYLPSADKSVITK--PHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVI 154 (185)
T ss_dssp ------G-TCCSCEEEEEEEEC-----------C--HHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHH
T ss_pred ------h-hccCCcCEEEEeCCCCCCcchhcccC--hhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 0 12567999999953322222111110 11122334567789999999999999753221 122333333
Q ss_pred h---ccceeEeecCCCCCCCCceEEEEEe
Q psy13508 466 R---SYKQVCIFKPNTSRPANSERYIVCK 491 (621)
Q Consensus 466 ~---~F~~V~i~KP~aSR~~ssE~YlVc~ 491 (621)
. ..-.+..+.+..........|++.+
T Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 183 (185)
T 3mti_A 155 GLDQRVFTAMLYQPLNQINTPPFLVMLEK 183 (185)
T ss_dssp HSCTTTEEEEEEEESSCSSCCCEEEEEEE
T ss_pred hCCCceEEEEEehhhccCCCCCeEEEEEe
Confidence 2 2234444555554456666766654
No 39
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.29 E-value=2e-07 Score=93.40 Aligned_cols=107 Identities=15% Similarity=0.111 Sum_probs=70.8
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
++||+ +|||||||+|.++..+.+..++.++++|+|+.+.. ++... +......++ ...+|..+++....
T Consensus 75 ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~---~~~l~----~~a~~~~ni~~V~~d~~~p~~~~~-- 143 (233)
T 4df3_A 75 VKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRV---MRDLL----TVVRDRRNIFPILGDARFPEKYRH-- 143 (233)
T ss_dssp CCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHH---HHHHH----HHSTTCTTEEEEESCTTCGGGGTT--
T ss_pred CCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHH---HHHHH----HhhHhhcCeeEEEEeccCcccccc--
Confidence 58998 99999999999999999999999999999997521 00000 000011122 35677777654321
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
....+|+|++|..... +. . ..+.-+...|||||.+++-+
T Consensus 144 -------~~~~vDvVf~d~~~~~----~~------~---~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 144 -------LVEGVDGLYADVAQPE----QA------A---IVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp -------TCCCEEEEEECCCCTT----HH------H---HHHHHHHHHEEEEEEEEEEE
T ss_pred -------ccceEEEEEEeccCCh----hH------H---HHHHHHHHhccCCCEEEEEE
Confidence 2457999999965431 11 1 12334678899999998754
No 40
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.28 E-value=6.7e-07 Score=90.46 Aligned_cols=165 Identities=12% Similarity=0.083 Sum_probs=93.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++..+..+. +..+++|+|+.+.. ......+.. ..+ ....+ + ...||+.+... .....
T Consensus 39 ~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~--~~~-~~l~~~v~~~~~D~~~~~~-----~~~~~ 109 (260)
T 2ozv_A 39 RIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLEL--PDN-AAFSARIEVLEADVTLRAK-----ARVEA 109 (260)
T ss_dssp EEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTS--GGG-TTTGGGEEEEECCTTCCHH-----HHHHT
T ss_pred EEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHh--hhh-CCCcceEEEEeCCHHHHhh-----hhhhh
Confidence 89999999999999998864 46799999997520 000000000 000 00000 1 35789887521 11111
Q ss_pred hcCCCcccEEEecCCCCCC-CchhhHHHHHHHH-----HHHH-HHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 396 STKGRGVHFMMADGGFSVE-GQENIQEILSKRL-----YLCQ-FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~-G~~~~de~~~~~L-----~l~~-l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
.+....+|+|+++-.+... +..+.++.....+ .+.+ +..+..+|+|||.|++ ++... ...+++..++..|
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~--~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL-ISRPQ--SVAEIIAACGSRF 186 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE-EECGG--GHHHHHHHHTTTE
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE-EEcHH--HHHHHHHHHHhcC
Confidence 2235689999999544332 2222111110000 1222 3367889999999988 44432 3456788888778
Q ss_pred ceeEeecCCCCCCCCceEEEEEeecCC
Q psy13508 469 KQVCIFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 469 ~~V~i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
..+.+....+.......+++|.-.+.+
T Consensus 187 ~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 187 GGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp EEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred CceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 888887766666677788888766544
No 41
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.26 E-value=5.8e-06 Score=84.16 Aligned_cols=136 Identities=14% Similarity=0.228 Sum_probs=74.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+||||||++..+..+....++++|+|+.+.. +... .+++ ...| + ...+|+.+..
T Consensus 82 ~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~---l~~~----~~~~-~~~g~~~v~~~~~D~~~~~---- 147 (274)
T 3ajd_A 82 REDD--FILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTR---TKAL----KSNI-NRMGVLNTIIINADMRKYK---- 147 (274)
T ss_dssp CTTC--EEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHH---HHHH----HHHH-HHTTCCSEEEEESCHHHHH----
T ss_pred CCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHH---HHHH----HHHH-HHhCCCcEEEEeCChHhcc----
Confidence 4566 89999999999999999876556899999987420 0000 0000 0112 1 2345554321
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhh------HHH-HHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHH
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENI------QEI-LSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLL 461 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~------de~-~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll 461 (621)
..+.. ....+|+|++|...+..|.-.. +.. ....+...-+..+..+|||||.+|+-+...........+
T Consensus 148 --~~~~~--~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v 223 (274)
T 3ajd_A 148 --DYLLK--NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVI 223 (274)
T ss_dssp --HHHHH--TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHH
T ss_pred --hhhhh--ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHH
Confidence 11100 2457999999965554443111 000 001122333446788999999999988765433344555
Q ss_pred -HHHHh
Q psy13508 462 -YLLYR 466 (621)
Q Consensus 462 -~~l~~ 466 (621)
+.+..
T Consensus 224 ~~~l~~ 229 (274)
T 3ajd_A 224 KYILQK 229 (274)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 44544
No 42
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.25 E-value=3.5e-07 Score=90.33 Aligned_cols=128 Identities=16% Similarity=0.071 Sum_probs=79.9
Q ss_pred CcchhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCC
Q psy13508 279 GPFLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLD 358 (621)
Q Consensus 279 ~~~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~ 358 (621)
..++++.++++.+..+.+++ +++. +|||+|||+|+++.+++.+.++.++++|+|+.+.. ++
T Consensus 56 ~~~~~~~~~~~~~~l~~~~~--------------~~~~--~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~---i~ 116 (233)
T 2ipx_A 56 NPFRSKLAAAILGGVDQIHI--------------KPGA--KVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS---GR 116 (233)
T ss_dssp CTTTCHHHHHHHTTCSCCCC--------------CTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHH---HH
T ss_pred cccchhHHHHHHhHHheecC--------------CCCC--EEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHH---HH
Confidence 35678888888765444433 5566 89999999999999999877667899999987410 00
Q ss_pred cccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhh
Q psy13508 359 DFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF 437 (621)
Q Consensus 359 ~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~ 437 (621)
.+... .....++ ...||+.++.... .....+|+|++|... .... ..-+..+..
T Consensus 117 ~~~~~----a~~~~~v~~~~~d~~~~~~~~---------~~~~~~D~V~~~~~~-----~~~~--------~~~~~~~~~ 170 (233)
T 2ipx_A 117 DLINL----AKKRTNIIPVIEDARHPHKYR---------MLIAMVDVIFADVAQ-----PDQT--------RIVALNAHT 170 (233)
T ss_dssp HHHHH----HHHCTTEEEECSCTTCGGGGG---------GGCCCEEEEEECCCC-----TTHH--------HHHHHHHHH
T ss_pred HHHHH----hhccCCeEEEEcccCChhhhc---------ccCCcEEEEEEcCCC-----ccHH--------HHHHHHHHH
Confidence 00000 0000122 4578888743211 124579999998751 1110 011223678
Q ss_pred ccCCCcEEEEEEcc
Q psy13508 438 IVRPEGHFVCKVFD 451 (621)
Q Consensus 438 ~Lr~GG~fV~K~F~ 451 (621)
+|+|||.+++-+..
T Consensus 171 ~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 171 FLRNGGHFVISIKA 184 (233)
T ss_dssp HEEEEEEEEEEEEH
T ss_pred HcCCCeEEEEEEcc
Confidence 99999999996654
No 43
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.21 E-value=5.3e-06 Score=91.10 Aligned_cols=134 Identities=20% Similarity=0.218 Sum_probs=80.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l 389 (621)
++|+ +|||+||||||++..+..+.+..++++|+|+.+.. .....++++ ..| + ...||..+ +
T Consensus 100 ~~g~--~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~-------l~~a~~n~~-r~G~~v~~~~~Da~~------l 163 (464)
T 3m6w_A 100 KPGE--RVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKR-------VRGLLENVE-RWGAPLAVTQAPPRA------L 163 (464)
T ss_dssp CTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHH-------HHHHHHHHH-HHCCCCEEECSCHHH------H
T ss_pred CCCC--EEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCeEEEEECCHHH------h
Confidence 5566 89999999999999999887767899999987420 000000110 112 2 23455432 1
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhh-----------HHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChH
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENI-----------QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSA 458 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~-----------de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~ 458 (621)
.... ...+|+|++|...+-+|.-.. +-.....+...-+..|..+|||||.+|.=+.........
T Consensus 164 ~~~~-----~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne 238 (464)
T 3m6w_A 164 AEAF-----GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENE 238 (464)
T ss_dssp HHHH-----CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH
T ss_pred hhhc-----cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCH
Confidence 1111 468999999976555443111 111112344444557889999999999877765333344
Q ss_pred HHH-HHHHhc
Q psy13508 459 GLL-YLLYRS 467 (621)
Q Consensus 459 ~ll-~~l~~~ 467 (621)
..+ +.+..+
T Consensus 239 ~vv~~~l~~~ 248 (464)
T 3m6w_A 239 GVVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 454 556554
No 44
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.20 E-value=7.9e-06 Score=89.56 Aligned_cols=134 Identities=18% Similarity=0.204 Sum_probs=80.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC----cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV----KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv----~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+||||||.+..+..+.+..++++|+|+.+.. ...-.++++ ..|+ ...+|..+
T Consensus 104 ~~g~--~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~r-------l~~~~~n~~-r~g~~nv~v~~~Da~~------ 167 (456)
T 3m4x_A 104 KPGE--KVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKR-------AKILSENIE-RWGVSNAIVTNHAPAE------ 167 (456)
T ss_dssp CTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHH-------HHHHHHHHH-HHTCSSEEEECCCHHH------
T ss_pred CCCC--EEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHH-------HHHHHHHHH-HcCCCceEEEeCCHHH------
Confidence 5566 89999999999999999887767899999987420 000000110 1122 22344332
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHH-----------HHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCCh
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQE-----------ILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFS 457 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de-----------~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s 457 (621)
+.... ...+|+|++|...+-+|.-..+. .....+...-+..|..+|||||.+|.=+........
T Consensus 168 l~~~~-----~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEn 242 (456)
T 3m4x_A 168 LVPHF-----SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEEN 242 (456)
T ss_dssp HHHHH-----TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGT
T ss_pred hhhhc-----cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccC
Confidence 21111 45799999997655555421111 111233344455888999999999987776543334
Q ss_pred HHHH-HHHHhc
Q psy13508 458 AGLL-YLLYRS 467 (621)
Q Consensus 458 ~~ll-~~l~~~ 467 (621)
...+ +.+.++
T Consensus 243 e~vv~~~l~~~ 253 (456)
T 3m4x_A 243 EEIISWLVENY 253 (456)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 4455 445543
No 45
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.16 E-value=1.6e-05 Score=82.73 Aligned_cols=132 Identities=16% Similarity=0.205 Sum_probs=78.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+|||||+++..+..+.+..++++|+|+.+.. .....+++. ..| + ...+|+.+...
T Consensus 117 ~~g~--~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~-------l~~a~~~~~-~~g~~~v~~~~~D~~~~~~--- 183 (315)
T 1ixk_A 117 KPGE--IVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENR-------LRETRLNLS-RLGVLNVILFHSSSLHIGE--- 183 (315)
T ss_dssp CTTC--EEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHH-------HHHHHHHHH-HHTCCSEEEESSCGGGGGG---
T ss_pred CCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHH-------HHHHHHHHH-HhCCCeEEEEECChhhccc---
Confidence 5566 89999999999999999877667899999987420 000000000 011 2 34567664221
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhh----------HH-HHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCCh
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENI----------QE-ILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFS 457 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~----------de-~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s 457 (621)
....+|+|++|...+..|.-.. +. .....+...-+..+..+|||||.+|+-+........
T Consensus 184 ---------~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~En 254 (315)
T 1ixk_A 184 ---------LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEEN 254 (315)
T ss_dssp ---------GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGT
T ss_pred ---------ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHh
Confidence 1357999999976555553111 10 011223334445788999999999998776433233
Q ss_pred HHHH-HHHHh
Q psy13508 458 AGLL-YLLYR 466 (621)
Q Consensus 458 ~~ll-~~l~~ 466 (621)
...+ +.+.+
T Consensus 255 e~~v~~~l~~ 264 (315)
T 1ixk_A 255 EFVIQWALDN 264 (315)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 3444 44554
No 46
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.14 E-value=1.2e-05 Score=87.24 Aligned_cols=134 Identities=18% Similarity=0.220 Sum_probs=80.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l 389 (621)
++|+ +|||+||||||++..+..+.. .++++|+|+.+.. +... .+++ ...| + ...+|..+...
T Consensus 245 ~~g~--~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~---l~~~----~~~~-~~~g~~~~~~~~D~~~~~~---- 309 (429)
T 1sqg_A 245 QNGE--HILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQR---LSRV----YDNL-KRLGMKATVKQGDGRYPSQ---- 309 (429)
T ss_dssp CTTC--EEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTT---HHHH----HHHH-HHTTCCCEEEECCTTCTHH----
T ss_pred CCcC--eEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHH---HHHH----HHHH-HHcCCCeEEEeCchhhchh----
Confidence 4566 899999999999999988653 4899999997531 0000 0000 0112 1 35678876431
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCch----hh-------HHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChH
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQE----NI-------QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSA 458 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~----~~-------de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~ 458 (621)
. +.+..+|+|++|...+..|.- +. +-.....+...-+..+..+|+|||.+|+-++........
T Consensus 310 --~----~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene 383 (429)
T 1sqg_A 310 --W----CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 (429)
T ss_dssp --H----HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTH
T ss_pred --h----cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHH
Confidence 1 134689999999765555531 10 001112233344557889999999999988765432233
Q ss_pred H-HHHHHHhc
Q psy13508 459 G-LLYLLYRS 467 (621)
Q Consensus 459 ~-ll~~l~~~ 467 (621)
. +...|..+
T Consensus 384 ~~v~~~l~~~ 393 (429)
T 1sqg_A 384 LQIKAFLQRT 393 (429)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 3 34556654
No 47
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.11 E-value=1.7e-05 Score=87.41 Aligned_cols=133 Identities=14% Similarity=0.040 Sum_probs=81.0
Q ss_pred CCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHH
Q psy13508 314 PGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSL 389 (621)
Q Consensus 314 ~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l 389 (621)
+|+ +|||+||||||.+..+..+.+..++++|+|+.+.. .....+++. ..| + ...+|..+...
T Consensus 117 ~g~--~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~-------l~~~~~n~~-r~g~~nv~~~~~D~~~~~~---- 182 (479)
T 2frx_A 117 APQ--RVMDVAAAPGSKTTQISARMNNEGAILANEFSASR-------VKVLHANIS-RCGISNVALTHFDGRVFGA---- 182 (479)
T ss_dssp CCS--EEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHH-------HHHHHHHHH-HHTCCSEEEECCCSTTHHH----
T ss_pred CCC--EEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCcEEEEeCCHHHhhh----
Confidence 676 89999999999999999887667899999987420 000000110 112 2 34677765221
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhh-----------HHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChH
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENI-----------QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSA 458 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~-----------de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~ 458 (621)
. ....+|+|++|...+..|.-.. +-.....+...-+..|..+|||||.+|.=+.........
T Consensus 183 --~-----~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene 255 (479)
T 2frx_A 183 --A-----VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENE 255 (479)
T ss_dssp --H-----STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTH
T ss_pred --h-----ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCH
Confidence 0 1457999999976554443111 111112334444557889999999999988765332344
Q ss_pred HHH-HHHHhc
Q psy13508 459 GLL-YLLYRS 467 (621)
Q Consensus 459 ~ll-~~l~~~ 467 (621)
+.+ +.|..+
T Consensus 256 ~vv~~~l~~~ 265 (479)
T 2frx_A 256 AVCLWLKETY 265 (479)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHC
Confidence 444 556654
No 48
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.10 E-value=4.3e-05 Score=73.01 Aligned_cols=155 Identities=15% Similarity=0.102 Sum_probs=83.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++..+..+. +.++++|+|+.+.. +.....++. ..| + ...||+.+ .+....
T Consensus 33 ~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~~~~~d~~~-----~~~~~~-- 96 (215)
T 4dzr_A 33 RVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDA-------LAVARRNAE-RFGAVVDWAAADGIE-----WLIERA-- 96 (215)
T ss_dssp EEEEEESSBCHHHHHHHHHC-TTEEEEEEECC---------------------------CCHHHHHH-----HHHHHH--
T ss_pred EEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHH-------HHHHHHHHH-HhCCceEEEEcchHh-----hhhhhh--
Confidence 89999999999999998863 46799999997531 111111111 111 1 23455443 111100
Q ss_pred hcCCCcccEEEecCCCCCCCchh-hHHHHH--------------HHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHH
Q psy13508 396 STKGRGVHFMMADGGFSVEGQEN-IQEILS--------------KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGL 460 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~-~de~~~--------------~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~l 460 (621)
.....+|+|++|..+...+... ...... ......-+..+.++|+|||.+++=.+... ....+
T Consensus 97 -~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~ 173 (215)
T 4dzr_A 97 -ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN--QADEV 173 (215)
T ss_dssp -HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS--CHHHH
T ss_pred -hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc--cHHHH
Confidence 1246899999986554332210 000000 00112233467789999999443333322 24455
Q ss_pred HHHHH---hccceeEeecCCCCCCCCceEEEEEeecCCC
Q psy13508 461 LYLLY---RSYKQVCIFKPNTSRPANSERYIVCKWKRPD 496 (621)
Q Consensus 461 l~~l~---~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~ 496 (621)
...+. .-|..+.+.+....+ +++++++...+.
T Consensus 174 ~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~~~ 208 (215)
T 4dzr_A 174 ARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREPGS 208 (215)
T ss_dssp HHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC--
T ss_pred HHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcCCC
Confidence 55555 458888888876544 889998876543
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.09 E-value=4.5e-05 Score=72.60 Aligned_cols=158 Identities=11% Similarity=0.052 Sum_probs=87.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.+++.+.++.++++|+|+.+.. +....+.+. ..| + ...||+.+...
T Consensus 21 ~~~~--~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~-- 88 (197)
T 3eey_A 21 KEGD--TVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKA-------IANTTKKLT-DLNLIDRVTLIKDGHQNMDK-- 88 (197)
T ss_dssp CTTC--EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHH-------HHHHHHHHH-HTTCGGGEEEECSCGGGGGG--
T ss_pred CCCC--EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCCeEEEECCHHHHhh--
Confidence 5666 89999999999999999887667899999987420 000000000 011 1 35677654221
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCC---hHHHHHHH
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPF---SAGLLYLL 464 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~---s~~ll~~l 464 (621)
.....+|+|++|.+.-..+....... .......+..+.++|+|||.+++-.|.+.... ...+...+
T Consensus 89 ---------~~~~~fD~v~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~ 157 (197)
T 3eey_A 89 ---------YIDCPVKAVMFNLGYLPSGDHSISTR--PETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFL 157 (197)
T ss_dssp ---------TCCSCEEEEEEEESBCTTSCTTCBCC--HHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHH
T ss_pred ---------hccCCceEEEEcCCcccCcccccccC--cccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHH
Confidence 12468999999976522222111000 00122244467889999999999998753221 12222333
Q ss_pred Hhcc---ceeEeecCCCCCCCCceEEEEEeecC
Q psy13508 465 YRSY---KQVCIFKPNTSRPANSERYIVCKWKR 494 (621)
Q Consensus 465 ~~~F---~~V~i~KP~aSR~~ssE~YlVc~g~~ 494 (621)
...- -.+..+... .++.+....+|.++..
T Consensus 158 ~~l~~~~~~v~~~~~~-~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 158 KGVDQKKFIVQRTDFI-NQANCPPILVCIEKIS 189 (197)
T ss_dssp TTSCTTTEEEEEEEET-TCCSCCCEEEEEEECC
T ss_pred HhCCCCcEEEEEEEec-cCccCCCeEEEEEEcc
Confidence 3221 123333332 3555565666665543
No 50
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.08 E-value=3.2e-05 Score=75.68 Aligned_cols=148 Identities=11% Similarity=-0.024 Sum_probs=81.2
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+++|+ +|||||||||.++..+..+.+ .++++|+|+.+.- ++.+.... ....++ ...||+.++....
T Consensus 55 ~~~g~--~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~---l~~~~~~a----~~~~~v~~~~~d~~~~~~~~--- 121 (210)
T 1nt2_A 55 LRGDE--RVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKP---FEKLLELV----RERNNIIPLLFDASKPWKYS--- 121 (210)
T ss_dssp CCSSC--EEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHH---HHHHHHHH----HHCSSEEEECSCTTCGGGTT---
T ss_pred CCCCC--EEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHH---HHHHHHHH----hcCCCeEEEEcCCCCchhhc---
Confidence 35666 899999999999999988765 6899999987420 00000000 000112 3457877643110
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC---CCCChHHHH----HH
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM---FTPFSAGLL----YL 463 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~---~~~~s~~ll----~~ 463 (621)
.. ...+|+|+||.... .+ .... +..+.++|||||.|++=+... ......++. ..
T Consensus 122 -----~~-~~~fD~V~~~~~~~------~~----~~~~---l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 182 (210)
T 1nt2_A 122 -----GI-VEKVDLIYQDIAQK------NQ----IEIL---KANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKE 182 (210)
T ss_dssp -----TT-CCCEEEEEECCCST------TH----HHHH---HHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHH
T ss_pred -----cc-ccceeEEEEeccCh------hH----HHHH---HHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHH
Confidence 11 35799999995321 11 1111 224678899999999875221 111122322 22
Q ss_pred HHhccceeEeecCCCCCCCCceEEEEEeec
Q psy13508 464 LYRSYKQVCIFKPNTSRPANSERYIVCKWK 493 (621)
Q Consensus 464 l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~ 493 (621)
|...|+-+.......-. ..-..+|++.|
T Consensus 183 l~~~f~~~~~~~~~p~~--~~h~~~~~~~~ 210 (210)
T 1nt2_A 183 MEGDFKIVKHGSLMPYH--RDHIFIHAYRF 210 (210)
T ss_dssp HHTTSEEEEEEECTTTC--TTEEEEEEEEC
T ss_pred HHhhcEEeeeecCCCCC--CCcEEEEEEcC
Confidence 55547766665432211 12344677654
No 51
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.06 E-value=6.7e-06 Score=88.39 Aligned_cols=101 Identities=18% Similarity=0.130 Sum_probs=68.3
Q ss_pred eEEEeccC------CChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAG------PGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaa------PGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+||||||| +||++..+..+..+.++++|+|+.+.. .. . ...+ ..+||+.+......+.+
T Consensus 219 rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m-------~~-~------~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 219 RVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS-------HV-D------ELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp EEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG-------GG-C------BTTEEEEECCTTCHHHHHHHHH
T ss_pred EEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH-------hh-c------CCCcEEEEecccccchhhhhhc
Confidence 89999999 677777666555567999999998642 00 0 1123 56899998766555433
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
. ...+|+|+||++... .+ ....+..+..+|||||.||+.-+.
T Consensus 285 ~------d~sFDlVisdgsH~~-----~d-------~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 285 R------YGPFDIVIDDGSHIN-----AH-------VRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp H------HCCEEEEEECSCCCH-----HH-------HHHHHHHHGGGEEEEEEEEEECGG
T ss_pred c------cCCccEEEECCcccc-----hh-------HHHHHHHHHHhcCCCeEEEEEecc
Confidence 1 257999999986421 11 112344567999999999997443
No 52
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.05 E-value=2.7e-05 Score=85.03 Aligned_cols=140 Identities=17% Similarity=0.212 Sum_probs=82.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+||||||++..+..+.+..++++|+|+.+.. +... .+++. ..| + ...+|+.+...
T Consensus 258 ~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~---l~~~----~~~~~-~~g~~~v~~~~~D~~~~~~--- 324 (450)
T 2yxl_A 258 KPGE--TVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMR---MKRL----KDFVK-RMGIKIVKPLVKDARKAPE--- 324 (450)
T ss_dssp CTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHH---HHHH----HHHHH-HTTCCSEEEECSCTTCCSS---
T ss_pred CCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHH---HHHH----HHHHH-HcCCCcEEEEEcChhhcch---
Confidence 5566 89999999999999999876555899999987420 0000 00000 011 2 34567765320
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCch----hh-------HHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCCh
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQE----NI-------QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFS 457 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~----~~-------de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s 457 (621)
.+.+..+|+|++|...+..|.- +. +-.....+...-+..+..+|||||.+|.-++.......
T Consensus 325 -------~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~en 397 (450)
T 2yxl_A 325 -------IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEEN 397 (450)
T ss_dssp -------SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGT
T ss_pred -------hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhH
Confidence 0123579999999765555431 11 00111223333455788999999999987776543223
Q ss_pred HH-HHHHHHhc--cceeE
Q psy13508 458 AG-LLYLLYRS--YKQVC 472 (621)
Q Consensus 458 ~~-ll~~l~~~--F~~V~ 472 (621)
.. +...|..+ |+.+.
T Consensus 398 e~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 398 EKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp HHHHHHHHHHCSSCEECC
T ss_pred HHHHHHHHHhCCCCEEee
Confidence 33 44556664 55443
No 53
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.02 E-value=2e-05 Score=78.55 Aligned_cols=126 Identities=10% Similarity=0.064 Sum_probs=76.9
Q ss_pred eEEEeccCCChhHHHHHHh---cCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYR---KKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r---~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||||||+|+++.++.++ .++.++++|+|+.+.. ..... .. ...+ ...||+.+......
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~-------l~~a~-~~--~~~v~~~~gD~~~~~~l~~------ 147 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR-------CQIPA-SD--MENITLHQGDCSDLTTFEH------ 147 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT-------CCCCG-GG--CTTEEEEECCSSCSGGGGG------
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH-------HHHHh-cc--CCceEEEECcchhHHHHHh------
Confidence 7999999999999999876 4567899999998531 11100 00 0123 46788887432110
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhh-ccCCCcEEEEEEc----cCCCCChHHHHHHHHh---
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF-IVRPEGHFVCKVF----DMFTPFSAGLLYLLYR--- 466 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~-~Lr~GG~fV~K~F----~~~~~~s~~ll~~l~~--- 466 (621)
.....+|+|++|++.. +. ...+..+.+ +|+|||.||+--+ .++. ...+...++.
T Consensus 148 --~~~~~fD~I~~d~~~~-----~~---------~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~--~~~~~~~l~~~~~ 209 (236)
T 2bm8_A 148 --LREMAHPLIFIDNAHA-----NT---------FNIMKWAVDHLLEEGDYFIIEDMIPYWYRYA--PQLFSEYLGAFRD 209 (236)
T ss_dssp --GSSSCSSEEEEESSCS-----SH---------HHHHHHHHHHTCCTTCEEEECSCHHHHHHHC--HHHHHHHHHTTTT
T ss_pred --hccCCCCEEEECCchH-----hH---------HHHHHHHHHhhCCCCCEEEEEeCcccccccC--HHHHHHHHHhCcc
Confidence 1234799999999731 11 112233554 9999999999432 1211 2245555554
Q ss_pred ccceeEeecCCC
Q psy13508 467 SYKQVCIFKPNT 478 (621)
Q Consensus 467 ~F~~V~i~KP~a 478 (621)
.|..+..++|..
T Consensus 210 ~f~~~~~~~~~~ 221 (236)
T 2bm8_A 210 VLSMDMLYANAS 221 (236)
T ss_dssp TEEEETTTTTSC
T ss_pred cEEEcchhhccc
Confidence 466666666665
No 54
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.01 E-value=2.1e-05 Score=83.57 Aligned_cols=138 Identities=17% Similarity=0.188 Sum_probs=75.7
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCC----CCcccCCCCCCccccCCC-cccccCCChhhH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFK----LDDFFAGPSETFEPYYGV-KGNGDVYDPENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~----l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~ 386 (621)
.+||+ +|||+||||||-|-.++.. ...+.++++|+.+..--. +.++. .........+ ....|-+. .
T Consensus 146 ~~pg~--~VLD~CAaPGGKT~~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r~~---~~~~~~~~~v~v~~~D~~~---~ 216 (359)
T 4fzv_A 146 LQPGD--IVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYV---PEEIRDGNQVRVTSWDGRK---W 216 (359)
T ss_dssp CCTTE--EEEESSCTTCHHHHHHHHT-TCEEEEEEECSCHHHHHHHHHHHHHHS---CTTTTTSSSEEEECCCGGG---H
T ss_pred CCCCC--EEEEecCCccHHHHHHHHh-cCCCcEEEEcCCHHHHHHHHHHHHHhh---hhhhccCCceEEEeCchhh---c
Confidence 36787 8999999999999988874 345788999876421000 00000 0000000001 11223221 1
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCc------h----hhHHH---HHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQ------E----NIQEI---LSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~------~----~~de~---~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
.. ..+..||.|+.|.-.+-+|. + ..... ....+...-+.-|+.+|||||.+|.=+....
T Consensus 217 ~~--------~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 217 GE--------LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp HH--------HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ch--------hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 11 13568999999975443311 0 11111 1123334445578999999999999998865
Q ss_pred CCChHHHHH-HHHh
Q psy13508 454 TPFSAGLLY-LLYR 466 (621)
Q Consensus 454 ~~~s~~ll~-~l~~ 466 (621)
.......+. .|+.
T Consensus 289 ~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 289 HLQNEYVVQGAIEL 302 (359)
T ss_dssp TTTTHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHh
Confidence 444555553 3443
No 55
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.98 E-value=0.0001 Score=76.63 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=74.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+||||||++..+..+.+..++++|+|+.+.. +... .++++ ..| + ...||..+.....
T Consensus 101 ~~g~--~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~---l~~~----~~n~~-r~g~~~v~~~~~D~~~~~~~~- 169 (309)
T 2b9e_A 101 PPGS--HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKR---LASM----ATLLA-RAGVSCCELAEEDFLAVSPSD- 169 (309)
T ss_dssp CTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHH---HHHH----HHHHH-HTTCCSEEEEECCGGGSCTTC-
T ss_pred CCCC--EEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHH---HHHH----HHHHH-HcCCCeEEEEeCChHhcCccc-
Confidence 5676 89999999999999999877667899999987421 0000 00000 112 1 3456655321000
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhh--HH-----------HHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENI--QE-----------ILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP 455 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~--de-----------~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~ 455 (621)
.....+|.|++|...+-+|.-.. |. .....+...-+..|..+|+ ||.+|.-+......
T Consensus 170 --------~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~ 240 (309)
T 2b9e_A 170 --------PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQE 240 (309)
T ss_dssp --------GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGG
T ss_pred --------cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChH
Confidence 00146999999987666665211 11 0011222233446777786 99999777664322
Q ss_pred ChHHH-HHHHHhc
Q psy13508 456 FSAGL-LYLLYRS 467 (621)
Q Consensus 456 ~s~~l-l~~l~~~ 467 (621)
..... .+.|.++
T Consensus 241 Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 241 ENEDVVRDALQQN 253 (309)
T ss_dssp GTHHHHHHHHTTS
T ss_pred HhHHHHHHHHHhC
Confidence 33344 4556654
No 56
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.91 E-value=2.1e-05 Score=76.92 Aligned_cols=106 Identities=16% Similarity=0.121 Sum_probs=65.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
++++ +|||+|||+|.++.++..+.++.++++|+|+.+.. +.... +......++ ...||+.++....
T Consensus 72 ~~~~--~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~---~~~~~----~~~~~~~~v~~~~~d~~~~~~~~---- 138 (227)
T 1g8a_A 72 KPGK--SVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRV---LRELV----PIVEERRNIVPILGDATKPEEYR---- 138 (227)
T ss_dssp CTTC--EEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHH---HHHHH----HHHSSCTTEEEEECCTTCGGGGT----
T ss_pred CCCC--EEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHH---HHHHH----HHHhccCCCEEEEccCCCcchhh----
Confidence 4565 89999999999999999877667899999987410 00000 000000122 4578888743211
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
. ....+|+|++|... +.. ....+..+..+|+|||.+++-+
T Consensus 139 ----~-~~~~~D~v~~~~~~-----~~~--------~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 139 ----A-LVPKVDVIFEDVAQ-----PTQ--------AKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ----T-TCCCEEEEEECCCS-----TTH--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----c-ccCCceEEEECCCC-----HhH--------HHHHHHHHHHhcCCCCEEEEEE
Confidence 0 13479999999751 111 0111334678999999999873
No 57
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.88 E-value=3.7e-05 Score=78.17 Aligned_cols=144 Identities=10% Similarity=-0.047 Sum_probs=93.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
++++ +|||+|||+|+|+..++.+. +.++++|+|+.+.. +....++.. ....+ ...||+.+..
T Consensus 118 ~~~~--~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~a-------v~~a~~n~~~n~l~~~~~~~~d~~~~~----- 182 (272)
T 3a27_A 118 NENE--VVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTA-------YHYLCENIKLNKLNNVIPILADNRDVE----- 182 (272)
T ss_dssp CTTC--EEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHH-------HHHHHHHHHHTTCSSEEEEESCGGGCC-----
T ss_pred CCCC--EEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHH-------HHHHHHHHHHcCCCCEEEEECChHHcC-----
Confidence 5566 89999999999999998764 36799999997520 000000000 00011 4567776420
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC---ChHHHHHHHHh
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP---FSAGLLYLLYR 466 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~---~s~~ll~~l~~ 466 (621)
....+|+|++|... + ..+. +..++..|+|||.+++..+...+. .....+..+..
T Consensus 183 --------~~~~~D~Vi~d~p~---~---~~~~---------l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3a27_A 183 --------LKDVADRVIMGYVH---K---THKF---------LDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAE 239 (272)
T ss_dssp --------CTTCEEEEEECCCS---S---GGGG---------HHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHH
T ss_pred --------ccCCceEEEECCcc---c---HHHH---------HHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHH
Confidence 13479999999754 1 1111 224567899999999988875221 12344555554
Q ss_pred c-cceeEeecCCCCCCCCceEEEEEeecC
Q psy13508 467 S-YKQVCIFKPNTSRPANSERYIVCKWKR 494 (621)
Q Consensus 467 ~-F~~V~i~KP~aSR~~ssE~YlVc~g~~ 494 (621)
. ...+.+.++..+|..+...|.+|..|+
T Consensus 240 ~~~~~~~~~~~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 240 KNGYKLIDYEVRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp HTTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HhCCeeEEeEEEEEEEECCCCCEEEEEEE
Confidence 3 467888888888888889999998886
No 58
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=97.87 E-value=5.1e-05 Score=76.02 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=76.5
Q ss_pred CcccEEEecCCCCCCCchhhHHHHHHHHHHHHHH-hhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCC
Q psy13508 400 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL-VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNT 478 (621)
Q Consensus 400 ~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~-~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~a 478 (621)
.++|+|..+++-...-.+-.|-. -..+.+.-+. -|+.+|+|||++|+|.|.--+..+..++..+.+.|..++++||..
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCe-DHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~c 288 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCV-DHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPC 288 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHH-HHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTT
T ss_pred CceeEEEEecCCccccchHHHHH-HHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCcc
Confidence 68999999998776654433322 2223444444 799999999999999999877788899999999999999999966
Q ss_pred CCCCCceEEEEEeecCCCch
Q psy13508 479 SRPANSERYIVCKWKRPDCD 498 (621)
Q Consensus 479 SR~~ssE~YlVc~g~~~~~~ 498 (621)
.-. |-|+++|..+|..+..
T Consensus 289 v~s-nTEv~~vF~~~Dng~r 307 (324)
T 3trk_A 289 VTS-NTEMFFLFSNFDNGRR 307 (324)
T ss_dssp CCB-TTCEEEEEEEECCCCC
T ss_pred ccc-cceEEEEEEeccCCcc
Confidence 544 9999999999976433
No 59
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.87 E-value=8.1e-08 Score=102.01 Aligned_cols=124 Identities=10% Similarity=-0.017 Sum_probs=71.0
Q ss_pred chhHhhhhhCCCCCCceeecccccccc----ccccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChh
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLKNV----LQCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQEN 93 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~~~----~~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~ 93 (621)
||+|++.++ .+.|++.|...|.+ .++|+ +++|.++.. ....++|+|+|||+++.++...
T Consensus 224 GWT~~l~~r----g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~------------~~~~~~D~vvsDm~~~p~~~~~ 287 (375)
T 4auk_A 224 GWTYQLVKR----NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFR------------PTRSNISWMVCDMVEKPAKVAA 287 (375)
T ss_dssp HHHHHHHHT----TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCC------------CCSSCEEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHC----CCEEEEEEhhhcChhhccCCCeEEEeCcccccc------------CCCCCcCEEEEcCCCChHHhHH
Confidence 899999987 34689999888765 36777 899987643 1346899999999999887665
Q ss_pred hhHHHHHHHHH-HH-------HHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccc-----eeEEecCCCCCCCCce
Q psy13508 94 IQEILSKRLYL-CQ-------FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYK-----QVCIFKPNTSRPANSE 160 (621)
Q Consensus 94 ~d~~~~~~L~l-~~-------l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~-----~v~~~KP~aSR~~s~E 160 (621)
.++.......- .. ++.....|+++|.++.|.|++. ++...+ ..+++|. .|+..||.+||+.+.|
T Consensus 288 l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~--g~~~~l-~akhL~hdReEiTV~~rk~~as~~~~Rd 364 (375)
T 4auk_A 288 LMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEH--GINAQI-QARQLYHDREEVTVHVRRIWAAVGGRRD 364 (375)
T ss_dssp HHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHT--TCCEEE-EEECCTTCSSEEEEEEEECCC-------
T ss_pred HHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhc--Ccchhh-eehhhccCCcEEEEEEEechhcccccch
Confidence 55432111100 00 0113344555555666666543 111111 1245554 4888899999999887
Q ss_pred e
Q psy13508 161 R 161 (621)
Q Consensus 161 ~ 161 (621)
.
T Consensus 365 e 365 (375)
T 4auk_A 365 E 365 (375)
T ss_dssp -
T ss_pred h
Confidence 5
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.81 E-value=0.0001 Score=69.07 Aligned_cols=126 Identities=10% Similarity=0.073 Sum_probs=79.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC--C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG--V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G--v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+ ..+++|+|+.+.. .....+.+. .... + ...+|+.+..
T Consensus 51 ~~~~--~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~-------~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--- 115 (194)
T 1dus_A 51 DKDD--DILDLGCGYGVIGIALADE---VKSTTMADINRRA-------IKLAKENIKLNNLDNYDIRVVHSDLYENV--- 115 (194)
T ss_dssp CTTC--EEEEETCTTSHHHHHHGGG---SSEEEEEESCHHH-------HHHHHHHHHHTTCTTSCEEEEECSTTTTC---
T ss_pred CCCC--eEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHH-------HHHHHHHHHHcCCCccceEEEECchhccc---
Confidence 3444 8999999999999988875 5799999987420 000000000 0001 1 3456776521
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
....+|+|+++..... +... ....+..+.++|+|||.+++-...... ...+...|...
T Consensus 116 ----------~~~~~D~v~~~~~~~~-~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~l~~~ 173 (194)
T 1dus_A 116 ----------KDRKYNKIITNPPIRA-GKEV---------LHRIIEEGKELLKDNGEIWVVIQTKQG--AKSLAKYMKDV 173 (194)
T ss_dssp ----------TTSCEEEEEECCCSTT-CHHH---------HHHHHHHHHHHEEEEEEEEEEEESTHH--HHHHHHHHHHH
T ss_pred ----------ccCCceEEEECCCccc-chhH---------HHHHHHHHHHHcCCCCEEEEEECCCCC--hHHHHHHHHHH
Confidence 2457999999875432 1111 112233567889999999999987532 44578888888
Q ss_pred cceeEeec
Q psy13508 468 YKQVCIFK 475 (621)
Q Consensus 468 F~~V~i~K 475 (621)
|..+.+++
T Consensus 174 ~~~~~~~~ 181 (194)
T 1dus_A 174 FGNVETVT 181 (194)
T ss_dssp HSCCEEEE
T ss_pred hcceEEEe
Confidence 98888764
No 61
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.81 E-value=0.00016 Score=67.15 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=68.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+. +.++++|+|+.+.. ......+... ... ..+...+|..+.
T Consensus 24 ~~~~--~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~---~~~--~~~~~~~d~~~~-------- 87 (178)
T 3hm2_A 24 KPHE--TLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINL---GVS--DRIAVQQGAPRA-------- 87 (178)
T ss_dssp CTTE--EEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTT---TCT--TSEEEECCTTGG--------
T ss_pred cCCC--eEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHh---CCC--CCEEEecchHhh--------
Confidence 4455 89999999999999988754 46899999987520 0000000000 000 011234565431
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
+. .....+|+|++++.... . ..+..+.++|+|||.+++-.+... ....+...+...
T Consensus 88 -~~--~~~~~~D~i~~~~~~~~------~---------~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~ 143 (178)
T 3hm2_A 88 -FD--DVPDNPDVIFIGGGLTA------P---------GVFAAAWKRLPVGGRLVANAVTVE--SEQMLWALRKQF 143 (178)
T ss_dssp -GG--GCCSCCSEEEECC-TTC------T---------THHHHHHHTCCTTCEEEEEECSHH--HHHHHHHHHHHH
T ss_pred -hh--ccCCCCCEEEECCcccH------H---------HHHHHHHHhcCCCCEEEEEeeccc--cHHHHHHHHHHc
Confidence 11 01268999999886643 1 112235679999999998887642 234455556555
No 62
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.79 E-value=0.00023 Score=69.39 Aligned_cols=140 Identities=8% Similarity=-0.083 Sum_probs=78.9
Q ss_pred CCCCcceEEEeccC-CChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAG-PGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaa-PGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+||| +|.++..+..+. .++++|+|+.+.. +....+++ ...| + ...||+.....
T Consensus 54 ~~~~--~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~-------~~~a~~~~-~~~~~~v~~~~~d~~~~~~--- 118 (230)
T 3evz_A 54 RGGE--VALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEF-------FEYARRNI-ERNNSNVRLVKSNGGIIKG--- 118 (230)
T ss_dssp CSSC--EEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHH-------HHHHHHHH-HHTTCCCEEEECSSCSSTT---
T ss_pred CCCC--EEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHH-------HHHHHHHH-HHhCCCcEEEeCCchhhhh---
Confidence 5565 89999999 999999988764 5799999987520 00000000 0011 2 45677643211
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHH--------HHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHH
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILS--------KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGL 460 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~--------~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~l 460 (621)
.....+|+|++|-.....+.....+... ..+....+..+.++|+|||.+++-+-.... ....+
T Consensus 119 --------~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~ 189 (230)
T 3evz_A 119 --------VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK-LLNVI 189 (230)
T ss_dssp --------TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH-HHHHH
T ss_pred --------cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh-HHHHH
Confidence 1246899999996544333221111100 011223344678999999999997654321 23466
Q ss_pred HHHHHhccceeEeecC
Q psy13508 461 LYLLYRSYKQVCIFKP 476 (621)
Q Consensus 461 l~~l~~~F~~V~i~KP 476 (621)
...+....-.+..++.
T Consensus 190 ~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 190 KERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCceEEEEe
Confidence 6777766446666655
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.78 E-value=3.5e-05 Score=74.20 Aligned_cols=148 Identities=10% Similarity=0.026 Sum_probs=90.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. ++||+|||+|.++.++..+ ..+++|+|+.+. ++.. .....++ ...+|+.+..
T Consensus 42 ~~~~--~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~-------~~~~----a~~~~~~~~~~~d~~~~~------- 98 (211)
T 3e23_A 42 PAGA--KILELGCGAGYQAEAMLAA---GFDVDATDGSPE-------LAAE----ASRRLGRPVRTMLFHQLD------- 98 (211)
T ss_dssp CTTC--EEEESSCTTSHHHHHHHHT---TCEEEEEESCHH-------HHHH----HHHHHTSCCEECCGGGCC-------
T ss_pred CCCC--cEEEECCCCCHHHHHHHHc---CCeEEEECCCHH-------HHHH----HHHhcCCceEEeeeccCC-------
Confidence 4455 8999999999999999875 468999998642 0000 0000022 3456665421
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC------------CChHH
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT------------PFSAG 459 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~------------~~s~~ 459 (621)
....+|+|+|.+.......++.. ..+..+.++|+|||.+++-+..... ....+
T Consensus 99 ------~~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 99 ------AIDAYDAVWAHACLLHVPRDELA---------DVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp ------CCSCEEEEEECSCGGGSCHHHHH---------HHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred ------CCCcEEEEEecCchhhcCHHHHH---------HHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 25689999998765433211211 1223456789999999998765421 12456
Q ss_pred HHHHHHhc--cceeEeecCCCCCC-CCceEEEEEeecCCCch
Q psy13508 460 LLYLLYRS--YKQVCIFKPNTSRP-ANSERYIVCKWKRPDCD 498 (621)
Q Consensus 460 ll~~l~~~--F~~V~i~KP~aSR~-~ssE~YlVc~g~~~~~~ 498 (621)
+..+|... |+.+.+........ .+.+.++.+...+++..
T Consensus 164 ~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~ 205 (211)
T 3e23_A 164 LRARYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPELE 205 (211)
T ss_dssp HHHHHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC-
T ss_pred HHHHHHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCccc
Confidence 67777765 88888775444333 34566777766665543
No 64
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.75 E-value=0.00062 Score=65.39 Aligned_cols=140 Identities=15% Similarity=0.159 Sum_probs=83.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+ ..+++|+|+.+. ++....+ ...+ ...+|+.+. .. ....
T Consensus 55 ~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~-------~~~~a~~----~~~~~~~~~~~~~~------~~--~~~~ 112 (227)
T 3e8s_A 55 RVLDLGCGEGWLLRALADR---GIEAVGVDGDRT-------LVDAARA----AGAGEVHLASYAQL------AE--AKVP 112 (227)
T ss_dssp EEEEETCTTCHHHHHHHTT---TCEEEEEESCHH-------HHHHHHH----TCSSCEEECCHHHH------HT--TCSC
T ss_pred EEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHH-------HHHHHHH----hcccccchhhHHhh------cc--cccc
Confidence 8999999999999999875 468999998742 0000000 0001 223343221 00 0001
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC-----------------------
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT----------------------- 454 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~----------------------- 454 (621)
.+..+|+|+|..... ..+.+. .+..+.++|+|||.+++-.+....
T Consensus 113 ~~~~fD~v~~~~~l~---~~~~~~---------~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (227)
T 3e8s_A 113 VGKDYDLICANFALL---HQDIIE---------LLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQ 180 (227)
T ss_dssp CCCCEEEEEEESCCC---SSCCHH---------HHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCC
T ss_pred cCCCccEEEECchhh---hhhHHH---------HHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcc
Confidence 245699999988766 222221 122456789999999998763210
Q ss_pred ------CChHHHHHHHHhc-cceeEeecCCCCCCC-CceEEEEEee
Q psy13508 455 ------PFSAGLLYLLYRS-YKQVCIFKPNTSRPA-NSERYIVCKW 492 (621)
Q Consensus 455 ------~~s~~ll~~l~~~-F~~V~i~KP~aSR~~-ssE~YlVc~g 492 (621)
....++..+|... |+.+.+..|...... ....++|++.
T Consensus 181 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 181 PMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp CEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEE
T ss_pred cceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeec
Confidence 0235677777766 998888877654442 2457777763
No 65
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.73 E-value=0.00023 Score=72.75 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=67.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|+++.++..+.+ ++++|+|+.+.. +....+.. ...| + ...+|+.+
T Consensus 71 ~~~~--~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~----- 133 (302)
T 3hem_A 71 EPGM--TLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQ-------YAHDKAMF-DEVDSPRRKEVRIQGWEE----- 133 (302)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHH-------HHHHHHHH-HHSCCSSCEEEEECCGGG-----
T ss_pred CCcC--EEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHH-------HHHHHHHH-HhcCCCCceEEEECCHHH-----
Confidence 5565 899999999999999988654 789999997420 00000000 0011 1 34566643
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCC-------CchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVE-------GQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~-------G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
+ ...+|+|+|-+....- |.++... .+..+.++|+|||.+++-.+...
T Consensus 134 ---------~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 134 ---------F-DEPVDRIVSLGAFEHFADGAGDAGFERYDT---------FFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ---------C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHH---------HHHHHHHSSCTTCEEEEEEEECC
T ss_pred ---------c-CCCccEEEEcchHHhcCccccccchhHHHH---------HHHHHHHhcCCCcEEEEEEEecc
Confidence 1 4579999998776544 3222222 23346789999999999888654
No 66
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.72 E-value=0.00038 Score=66.33 Aligned_cols=140 Identities=12% Similarity=0.064 Sum_probs=87.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++.++..+ ..+++|+|+.+. +.....+. ..++ ...||+.+.. +
T Consensus 44 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------~ 98 (203)
T 3h2b_A 44 VILDVGSGTGRWTGHLASL---GHQIEGLEPATR-------LVELARQT---HPSVTFHHGTITDLS------------D 98 (203)
T ss_dssp CEEEETCTTCHHHHHHHHT---TCCEEEECCCHH-------HHHHHHHH---CTTSEEECCCGGGGG------------G
T ss_pred eEEEecCCCCHHHHHHHhc---CCeEEEEeCCHH-------HHHHHHHh---CCCCeEEeCcccccc------------c
Confidence 7999999999999999875 458999998642 00000000 1122 4567776522 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC-------------CChHHHHHHH
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-------------PFSAGLLYLL 464 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~-------------~~s~~ll~~l 464 (621)
....+|+|++..........+... .+..+.++|+|||.+++-.+.... ....++..+|
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~---------~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 99 SPKRWAGLLAWYSLIHMGPGELPD---------ALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQAL 169 (203)
T ss_dssp SCCCEEEEEEESSSTTCCTTTHHH---------HHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHH
T ss_pred CCCCeEEEEehhhHhcCCHHHHHH---------HHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHH
Confidence 357899999987665433222222 122456789999999998876432 1245677777
Q ss_pred Hhc-cceeEeecCCCCCCCCceEEEEEeecCCC
Q psy13508 465 YRS-YKQVCIFKPNTSRPANSERYIVCKWKRPD 496 (621)
Q Consensus 465 ~~~-F~~V~i~KP~aSR~~ssE~YlVc~g~~~~ 496 (621)
... |+.+.+..-.. ....|++.....+.
T Consensus 170 ~~~Gf~~~~~~~~~~----~p~~~l~~~~~~~~ 198 (203)
T 3h2b_A 170 ETAGFQVTSSHWDPR----FPHAYLTAEASLEH 198 (203)
T ss_dssp HHTTEEEEEEEECTT----SSEEEEEEEECC--
T ss_pred HHCCCcEEEEEecCC----Ccchhhhhhhhhhh
Confidence 766 77776654322 56677777776554
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.70 E-value=0.00057 Score=63.86 Aligned_cols=143 Identities=12% Similarity=0.059 Sum_probs=85.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+ ..+++|+|+.+.. ....... ..++ ...+|+.+..
T Consensus 45 ~~~~--~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~-------~~~a~~~---~~~~~~~~~d~~~~~------- 102 (195)
T 3cgg_A 45 PRGA--KILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPIL-------IDYAKQD---FPEARWVVGDLSVDQ------- 102 (195)
T ss_dssp CTTC--EEEEETCTTTHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHH---CTTSEEEECCTTTSC-------
T ss_pred cCCC--eEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHH-------HHHHHHh---CCCCcEEEcccccCC-------
Confidence 4454 8999999999999998875 4689999986420 0000000 0112 3466776532
Q ss_pred HHHhhcCCCcccEEEecCCC-CCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-cc
Q psy13508 392 FVMKSTKGRGVHFMMADGGF-SVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YK 469 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~-~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F~ 469 (621)
.....+|+|++.+.. .....+. ....+..+..+|+|||.+++-...........+...+... |+
T Consensus 103 -----~~~~~~D~i~~~~~~~~~~~~~~---------~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 103 -----ISETDFDLIVSAGNVMGFLAEDG---------REPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLE 168 (195)
T ss_dssp -----CCCCCEEEEEECCCCGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEE
T ss_pred -----CCCCceeEEEECCcHHhhcChHH---------HHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCE
Confidence 124679999998532 1111111 1122334568899999999988765433456677777755 88
Q ss_pred eeEeecCCCCCC---CCceEEEEEe
Q psy13508 470 QVCIFKPNTSRP---ANSERYIVCK 491 (621)
Q Consensus 470 ~V~i~KP~aSR~---~ssE~YlVc~ 491 (621)
.+.+......++ .+.-.++|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~v~~ 193 (195)
T 3cgg_A 169 LENAFESWDLKPFVQGSEFLVAVFT 193 (195)
T ss_dssp EEEEESSTTCCBCCTTCSEEEEEEE
T ss_pred EeeeecccccCcCCCCCcEEEEEEe
Confidence 887766644443 2333444544
No 68
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.69 E-value=0.00074 Score=65.00 Aligned_cols=144 Identities=10% Similarity=-0.037 Sum_probs=87.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++.++..+.++.++++|+|+.+.. .....+.+. ....+ ...+|+.+..
T Consensus 36 ~~~~--~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~~d~~~~~----- 101 (219)
T 3dh0_A 36 KEGM--TVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEM-------VNYAWEKVNKLGLKNVEVLKSEENKIP----- 101 (219)
T ss_dssp CTTC--EEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHH-------HHHHHHHHHHHTCTTEEEEECBTTBCS-----
T ss_pred CCCC--EEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHH-------HHHHHHHHHHcCCCcEEEEecccccCC-----
Confidence 4454 89999999999999999876667899999986420 000000000 00012 3567776532
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC----------ChHH
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP----------FSAG 459 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~----------~s~~ 459 (621)
+....+|+|++........ +. ...+..+.++|+|||.+++-.+..... ...+
T Consensus 102 -------~~~~~fD~v~~~~~l~~~~--~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3dh0_A 102 -------LPDNTVDFIFMAFTFHELS--EP---------LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWE 163 (219)
T ss_dssp -------SCSSCEEEEEEESCGGGCS--SH---------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHH
T ss_pred -------CCCCCeeEEEeehhhhhcC--CH---------HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHH
Confidence 1356799999987654331 11 112334568899999999977653211 1356
Q ss_pred HHHHHHhc-cceeEeecCCCCCCCCceEEEEEeec
Q psy13508 460 LLYLLYRS-YKQVCIFKPNTSRPANSERYIVCKWK 493 (621)
Q Consensus 460 ll~~l~~~-F~~V~i~KP~aSR~~ssE~YlVc~g~ 493 (621)
+..++... |+.+.+..-. ....+++++.-
T Consensus 164 ~~~~l~~~Gf~~~~~~~~~-----~~~~~~~~~k~ 193 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVVEVG-----KYCFGVYAMIV 193 (219)
T ss_dssp HHHHHHHTTCEEEEEEEET-----TTEEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEeeC-----CceEEEEEEec
Confidence 77777766 8877765432 24555666643
No 69
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.68 E-value=0.00014 Score=71.47 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=62.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.+++.+.+ .++++|+|+.+.. +..... .......+ ...||+.++...
T Consensus 73 ~~~~--~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~---~~~a~~----~~~~~~~v~~~~~d~~~~~~~----- 137 (230)
T 1fbn_A 73 KRDS--KILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRI---MRELLD----ACAERENIIPILGDANKPQEY----- 137 (230)
T ss_dssp CTTC--EEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHH---HHHHHH----HTTTCTTEEEEECCTTCGGGG-----
T ss_pred CCCC--EEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHH---HHHHHH----HhhcCCCeEEEECCCCCcccc-----
Confidence 4555 899999999999999998755 6899999987520 000000 00000112 356788764321
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+ .. ...+|+|++|... +.. ....+..+...|+|||.+++-+
T Consensus 138 -~--~~-~~~~D~v~~~~~~-----~~~--------~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 138 -A--NI-VEKVDVIYEDVAQ-----PNQ--------AEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp -T--TT-SCCEEEEEECCCS-----TTH--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -c--cc-CccEEEEEEecCC-----hhH--------HHHHHHHHHHhCCCCcEEEEEE
Confidence 0 11 2579999977421 110 1112335677899999998863
No 70
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.66 E-value=9.1e-05 Score=74.99 Aligned_cols=146 Identities=10% Similarity=0.053 Sum_probs=86.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
++||+|||+|.++..+..+. +.++++|+|+.+.. .....++.. ..| + ...||+.++-
T Consensus 112 ~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~-------l~~a~~n~~-~~~~~~v~~~~~d~~~~~---------- 172 (276)
T 2b3t_A 112 RILDLGTGTGAIALALASER-PDCEIIAVDRMPDA-------VSLAQRNAQ-HLAIKNIHILQSDWFSAL---------- 172 (276)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHH-------HHHHHHHHH-HHTCCSEEEECCSTTGGG----------
T ss_pred EEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHH-------HHHHHHHHH-HcCCCceEEEEcchhhhc----------
Confidence 79999999999999988654 56899999987420 000000000 011 2 4567877531
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHH--------------HHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHH
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEIL--------------SKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGL 460 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~--------------~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~l 460 (621)
....+|+|+|+-.....+........ .......-+..+..+|+|||.+++-.-. .....+
T Consensus 173 ---~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~ 246 (276)
T 2b3t_A 173 ---AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---QQGEAV 246 (276)
T ss_dssp ---TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS---SCHHHH
T ss_pred ---ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc---hHHHHH
Confidence 13579999998433222211110000 0011122233678899999999986422 124566
Q ss_pred HHHHHhc-cceeEeecCCCCCCCCceEEEEEeec
Q psy13508 461 LYLLYRS-YKQVCIFKPNTSRPANSERYIVCKWK 493 (621)
Q Consensus 461 l~~l~~~-F~~V~i~KP~aSR~~ssE~YlVc~g~ 493 (621)
...+... |..+.+.+.. ...+++++|+.|
T Consensus 247 ~~~l~~~Gf~~v~~~~d~----~g~~r~~~~~~~ 276 (276)
T 2b3t_A 247 RQAFILAGYHDVETCRDY----GDNERVTLGRYY 276 (276)
T ss_dssp HHHHHHTTCTTCCEEECT----TSSEEEEEEECC
T ss_pred HHHHHHCCCcEEEEEecC----CCCCcEEEEEEC
Confidence 6777655 8888888765 456788887754
No 71
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.62 E-value=0.0003 Score=69.76 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=74.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC-C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG-V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G-v-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+|||+|+++.+++.+.++.++++|+|+.+.. .....+++. ...+ + ...||+.+.
T Consensus 92 ~~~~--~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~-------~~~a~~~~~~~~~~~~v~~~~~d~~~~----- 157 (255)
T 3mb5_A 92 SPGD--FIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDF-------AKLAWENIKWAGFDDRVTIKLKDIYEG----- 157 (255)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHH-------HHHHHHHHHHHTCTTTEEEECSCGGGC-----
T ss_pred CCCC--EEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHH-------HHHHHHHHHHcCCCCceEEEECchhhc-----
Confidence 4565 89999999999999999876778999999987420 000000000 0011 1 345666531
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS- 467 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~- 467 (621)
+....+|+|++|.... .+ .+..+..+|+|||.+++-..... ....+...+...
T Consensus 158 --------~~~~~~D~v~~~~~~~-------~~---------~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~g 211 (255)
T 3mb5_A 158 --------IEEENVDHVILDLPQP-------ER---------VVEHAAKALKPGGFFVAYTPCSN--QVMRLHEKLREFK 211 (255)
T ss_dssp --------CCCCSEEEEEECSSCG-------GG---------GHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHTG
T ss_pred --------cCCCCcCEEEECCCCH-------HH---------HHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHHcC
Confidence 1345799999986421 11 12245688999999998654321 233555666655
Q ss_pred --cceeEee
Q psy13508 468 --YKQVCIF 474 (621)
Q Consensus 468 --F~~V~i~ 474 (621)
|..+.++
T Consensus 212 ~~f~~~~~~ 220 (255)
T 3mb5_A 212 DYFMKPRTI 220 (255)
T ss_dssp GGBSCCEEE
T ss_pred CCccccEEE
Confidence 8777654
No 72
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.60 E-value=5.9e-05 Score=74.75 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=67.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+. .++++|+|+.+.. .....+.......+ ...+|+.+..
T Consensus 54 ~~~~--~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~d~~~~~------- 115 (266)
T 3ujc_A 54 NENS--KVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNI-------VNMANERVSGNNKIIFEANDILTKE------- 115 (266)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHH-------HHHHHHTCCSCTTEEEEECCTTTCC-------
T ss_pred CCCC--EEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHH-------HHHHHHHhhcCCCeEEEECccccCC-------
Confidence 4555 89999999999999998865 5799999997520 00000000000112 3567877532
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|++......-+..+.. ..+..+.++|+|||.+++-.+..
T Consensus 116 -----~~~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 116 -----FPENNFDLIYSRDAILALSLENKN---------KLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp -----CCTTCEEEEEEESCGGGSCHHHHH---------HHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----CCCCcEEEEeHHHHHHhcChHHHH---------HHHHHHHHHcCCCCEEEEEEecc
Confidence 135689999998765443222222 22234568899999999987653
No 73
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.60 E-value=4.9e-05 Score=79.43 Aligned_cols=151 Identities=11% Similarity=0.036 Sum_probs=88.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCC-CcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKL-DDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l-~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|+.+.+++++. +..++.++|+.+.- +.. .+.+... ....+ ...||..+ ++..
T Consensus 92 rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~v-i~~Ar~~~~~~-----~~~rv~v~~~Da~~---------~l~~- 154 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVY-PQSRNTVVELDAEL-ARLSREWFDIP-----RAPRVKIRVDDARM---------VAES- 154 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHH-HHHHHHHSCCC-----CTTTEEEEESCHHH---------HHHT-
T ss_pred EEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHH-HHHHHHhcccc-----CCCceEEEECcHHH---------HHhh-
Confidence 79999999999999999754 45689999987520 000 0001000 00011 23445432 2211
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCC-CChHHHHHHHHhccceeEee
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFT-PFSAGLLYLLYRSYKQVCIF 474 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~-~~s~~ll~~l~~~F~~V~i~ 474 (621)
.....+|+|++|..... +.... |. ..-+..+.++|+|||.||+-+.+... .....++..|+..|..|.++
T Consensus 155 ~~~~~fDvIi~D~~~~~-~~~~~-------L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~ 226 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGA-ITPQN-------FTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVI 226 (317)
T ss_dssp CCTTCEEEEEECCSTTS-CCCGG-------GSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEE
T ss_pred ccCCCCCEEEECCCCcc-ccchh-------hhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEE
Confidence 23468999999974332 22111 11 01122456899999999999986432 12346778899999999988
Q ss_pred c-CCCCCC-CCceEEEEEeecC
Q psy13508 475 K-PNTSRP-ANSERYIVCKWKR 494 (621)
Q Consensus 475 K-P~aSR~-~ssE~YlVc~g~~ 494 (621)
. |..++. ......++|..--
T Consensus 227 ~~~~~~~g~~~gN~Vl~As~~p 248 (317)
T 3gjy_A 227 ADPPMLKGRRYGNIILMGSDTE 248 (317)
T ss_dssp ECHHHHTTSSCEEEEEEEESSC
T ss_pred EecCCCCCCcCceEEEEEECCC
Confidence 6 444444 2345667776543
No 74
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.59 E-value=8.7e-05 Score=74.11 Aligned_cols=101 Identities=11% Similarity=0.068 Sum_probs=61.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.+++......++++|+|+.+.. .....+.+. ..| + ...||..+ ... ...
T Consensus 63 ~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~-------~~~a~~~~~-~~g~~~~i~~~~gda~~--~l~---~~~ 129 (242)
T 3r3h_A 63 KVLELGTFTGYSALAMSLALPDDGQVITCDINEGW-------TKHAHPYWR-EAKQEHKIKLRLGPALD--TLH---SLL 129 (242)
T ss_dssp EEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSS-------CCCSHHHHH-HTTCTTTEEEEESCHHH--HHH---HHH
T ss_pred EEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEEcCHHH--HHH---HHh
Confidence 79999999999999999876557899999998531 111111111 112 1 34566442 111 111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
. ......+|+|++|+.. .+.. ..+..+..+|+|||.+|+
T Consensus 130 ~-~~~~~~fD~V~~d~~~-----~~~~---------~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 130 N-EGGEHQFDFIFIDADK-----TNYL---------NYYELALKLVTPKGLIAI 168 (242)
T ss_dssp H-HHCSSCEEEEEEESCG-----GGHH---------HHHHHHHHHEEEEEEEEE
T ss_pred h-ccCCCCEeEEEEcCCh-----HHhH---------HHHHHHHHhcCCCeEEEE
Confidence 1 1124689999999752 1121 123345789999999998
No 75
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.58 E-value=0.00018 Score=72.83 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=64.7
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcC-CCCeEEEEecCCCCCCCCCcccCCCCCCcc---ccCCC-cccccCCChhhH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKK-WRAKGIGFTLTGSHDFKLDDFFAGPSETFE---PYYGV-KGNGDVYDPENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~-~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~---~~~Gv-~~~GDI~~~~~~ 386 (621)
+++|. +|||||||+|.++..++++.. +.++++|+|+.+. ++....+.+. ....+ ..+||+.+.
T Consensus 68 ~~~~~--~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~-------ml~~A~~~~~~~~~~~~v~~~~~D~~~~--- 135 (261)
T 4gek_A 68 VQPGT--QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPA-------MIERCRRHIDAYKAPTPVDVIEGDIRDI--- 135 (261)
T ss_dssp CCTTC--EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHH-------HHHHHHHHHHTSCCSSCEEEEESCTTTC---
T ss_pred CCCCC--EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHH-------HHHHHHHHHHhhccCceEEEeecccccc---
Confidence 46777 899999999999999987754 4569999999752 1100000000 00012 457888762
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|++-.....- +..+ ....+.-+.++|||||.||+--..
T Consensus 136 -----------~~~~~d~v~~~~~l~~~--~~~~-------~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 136 -----------AIENASMVVLNFTLQFL--EPSE-------RQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp -----------CCCSEEEEEEESCGGGS--CHHH-------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -----------cccccccceeeeeeeec--Cchh-------HhHHHHHHHHHcCCCcEEEEEecc
Confidence 23468999986533211 1111 011233467889999999985443
No 76
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.57 E-value=0.00017 Score=69.89 Aligned_cols=111 Identities=9% Similarity=0.039 Sum_probs=63.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++.++..+ ..+++|+|+.+..--........ .......+ + ...+|+.+..
T Consensus 29 ~~~~--~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~d~~~~~----- 96 (235)
T 3sm3_A 29 QEDD--EILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARS--PGLNQKTGGKAEFKVENASSLS----- 96 (235)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTC--CSCCSSSSCEEEEEECCTTSCC-----
T ss_pred CCCC--eEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHh--cCCccccCcceEEEEecccccC-----
Confidence 4555 8999999999999999875 46899999975210000000000 00000001 1 3456766522
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+....+|+|++......-.+. ++ ....+..+.++|+|||.+++-.+
T Consensus 97 -------~~~~~~D~v~~~~~l~~~~~~--~~------~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 97 -------FHDSSFDFAVMQAFLTSVPDP--KE------RSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp -------SCTTCEEEEEEESCGGGCCCH--HH------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CCCCceeEEEEcchhhcCCCH--HH------HHHHHHHHHHHcCCCeEEEEEEC
Confidence 135689999998655432221 11 01122345688999999999765
No 77
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.57 E-value=0.00018 Score=72.78 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=69.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||||||+|.++..+..+ ..+++|+|+.+. ++.... ...++ ...||..+.. +
T Consensus 42 ~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~-------ml~~a~----~~~~v~~~~~~~e~~~------------~ 95 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLAEF---FERVHAVDPGEA-------QIRQAL----RHPRVTYAVAPAEDTG------------L 95 (257)
T ss_dssp EEEEESCTTTTTHHHHHTT---CSEEEEEESCHH-------HHHTCC----CCTTEEEEECCTTCCC------------C
T ss_pred CEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHH-------hhhhhh----hcCCceeehhhhhhhc------------c
Confidence 7999999999999998864 368999998742 111100 01123 3466765422 2
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
....+|+|+|-.+.... +.+. . +.-+.++|||||.|++=.|.... ....+-..+.+++
T Consensus 96 ~~~sfD~v~~~~~~h~~---~~~~------~---~~e~~rvLkpgG~l~~~~~~~~~-~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 96 PPASVDVAIAAQAMHWF---DLDR------F---WAELRRVARPGAVFAAVTYGLTR-VDPEVDAVVDRLY 153 (257)
T ss_dssp CSSCEEEEEECSCCTTC---CHHH------H---HHHHHHHEEEEEEEEEEEECCCB-CCHHHHHHHHHHH
T ss_pred cCCcccEEEEeeehhHh---hHHH------H---HHHHHHHcCCCCEEEEEECCCCC-CCHHHHHHHHHHH
Confidence 45789999997776543 1211 1 23456789999999988776432 3344444444443
No 78
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.54 E-value=8.6e-05 Score=73.17 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=70.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+. .+++|+|+.+. ++....+.. ....+ ...+|+.+......+..
T Consensus 55 ~~~~--~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~-------~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 55 NPEL--PLIDFACGNGTQTKFLSQFF---PRVIGLDVSKS-------ALEIAAKEN-TAANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp CTTS--CEEEETCTTSHHHHHHHHHS---SCEEEEESCHH-------HHHHHHHHS-CCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCC--eEEEEcCCCCHHHHHHHHhC---CCEEEEECCHH-------HHHHHHHhC-cccCceEEECccccccccccccc
Confidence 4455 79999999999999998753 38999998742 000000000 00122 46789998654433221
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|++..........+... .+..+..+|+|||.+++--+..
T Consensus 122 -------~~~~d~v~~~~~~~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 122 -------EIGDANIYMRTGFHHIPVEKREL---------LGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp -------HHCSCEEEEESSSTTSCGGGHHH---------HHHHHHHHHTTTCEEEEEEECT
T ss_pred -------ccCccEEEEcchhhcCCHHHHHH---------HHHHHHHHcCCCCEEEEEeCCc
Confidence 23599999998776654323322 1224567899999999888864
No 79
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.53 E-value=0.00026 Score=72.06 Aligned_cols=122 Identities=15% Similarity=-0.061 Sum_probs=73.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC-C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG-V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G-v-~~~GDI~~~~~~~~ 388 (621)
++|+ +|||+|||+|+|+.+++.+. .. +++|+|+.+.. +....++.. ...+ + ...||+.+..
T Consensus 124 ~~~~--~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~-------~~~a~~n~~~n~~~~~v~~~~~D~~~~~---- 188 (278)
T 2frn_A 124 KPDE--LVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYT-------FKFLVENIHLNKVEDRMSAYNMDNRDFP---- 188 (278)
T ss_dssp CTTC--EEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHH-------HHHHHHHHHHTTCTTTEEEECSCTTTCC----
T ss_pred CCCC--EEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHH-------HHHHHHHHHHcCCCceEEEEECCHHHhc----
Confidence 5566 89999999999999998753 22 79999997520 000000000 0011 2 4567877632
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC----CCCChHHHHHHH
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM----FTPFSAGLLYLL 464 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~----~~~~s~~ll~~l 464 (621)
....+|+|++|..+.. .+ .+..+.++|+|||.+++-.+.. .......+...+
T Consensus 189 ---------~~~~fD~Vi~~~p~~~------~~---------~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~ 244 (278)
T 2frn_A 189 ---------GENIADRILMGYVVRT------HE---------FIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRIT 244 (278)
T ss_dssp ---------CCSCEEEEEECCCSSG------GG---------GHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHH
T ss_pred ---------ccCCccEEEECCchhH------HH---------HHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHH
Confidence 1457999999854322 11 1124677999999999988763 122344555666
Q ss_pred HhccceeEe
Q psy13508 465 YRSYKQVCI 473 (621)
Q Consensus 465 ~~~F~~V~i 473 (621)
...-.++.+
T Consensus 245 ~~~G~~~~~ 253 (278)
T 2frn_A 245 KEYGYDVEK 253 (278)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeeEE
Confidence 655445554
No 80
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.52 E-value=0.00024 Score=66.72 Aligned_cols=130 Identities=13% Similarity=0.061 Sum_probs=79.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++.++..+. +++|+|+.+. +... ...+ ..+||+.++-
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~-------~~~~-------~~~~~~~~~d~~~~~------------- 74 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIR-------ALES-------HRGGNLVRADLLCSI------------- 74 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHH-------HHHT-------CSSSCEEECSTTTTB-------------
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHH-------HHhc-------ccCCeEEECChhhhc-------------
Confidence 89999999999999988642 9999999742 1111 1112 4578887631
Q ss_pred CCCcccEEEecCCCCCCCch-------hhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-cc
Q psy13508 398 KGRGVHFMMADGGFSVEGQE-------NIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YK 469 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~-------~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F~ 469 (621)
....+|+|+|+......... ...+ .+.+ .+..| |||.+++-..... ....+...+... |+
T Consensus 75 ~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~l-pgG~l~~~~~~~~--~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 75 NQESVDVVVFNPPYVPDTDDPIIGGGYLGRE------VIDR---FVDAV-TVGMLYLLVIEAN--RPKEVLARLEERGYG 142 (170)
T ss_dssp CGGGCSEEEECCCCBTTCCCTTTBCCGGGCH------HHHH---HHHHC-CSSEEEEEEEGGG--CHHHHHHHHHHTTCE
T ss_pred ccCCCCEEEECCCCccCCccccccCCcchHH------HHHH---HHhhC-CCCEEEEEEecCC--CHHHHHHHHHHCCCc
Confidence 23579999998665432221 1111 1122 22233 9999998776542 256677777754 77
Q ss_pred eeEeecCCCCCCCCceEEEEEeecCC
Q psy13508 470 QVCIFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 470 ~V~i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
.+.+.+-. ...|+.++.+.++.
T Consensus 143 ~~~~~~~~----~~~e~~~~~~~~~~ 164 (170)
T 3q87_B 143 TRILKVRK----ILGETVYIIKGEKS 164 (170)
T ss_dssp EEEEEEEE----CSSSEEEEEEEECC
T ss_pred EEEEEeec----cCCceEEEEEEecc
Confidence 76666533 33455555555543
No 81
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.52 E-value=0.00017 Score=74.43 Aligned_cols=153 Identities=10% Similarity=0.057 Sum_probs=86.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCC-CcccCCC-CCCccccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKL-DDFFAGP-SETFEPYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l-~~~~~~~-~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||||||.|+++..++++ .+..++.++|+.+.- .+. .+..... ...+. ...+ ...||..+. +..
T Consensus 86 ~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~v-i~~ar~~~~~~~~~~~~-~~rv~~~~~D~~~~---------l~~ 153 (294)
T 3adn_A 86 HVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGV-VSFCRQYLPNHNAGSYD-DPRFKLVIDDGVNF---------VNQ 153 (294)
T ss_dssp EEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTH-HHHHHHHCHHHHSSCTT-CTTCCEECSCSCC------------C
T ss_pred EEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHH-HHHHHHhhhhccccccc-CCceEEEEChHHHH---------Hhh
Confidence 8999999999999999874 346789999997530 000 0000000 00000 0012 346777652 111
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHH-HHhhhhccCCCcEEEEEEccCC--CCChHHHHHHHHhccceeE
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVC 472 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~-l~~al~~Lr~GG~fV~K~F~~~--~~~s~~ll~~l~~~F~~V~ 472 (621)
....+|+|++|......... .|...+ +..+.+.|+|||.||+-.-... ......++..++..|..|.
T Consensus 154 --~~~~fDvIi~D~~~p~~~~~--------~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 154 --TSQTFDVIISDCTDPIGPGE--------SLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp --CCCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEE
T ss_pred --cCCCccEEEECCCCccCcch--------hccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeE
Confidence 24689999999864331111 111111 2245789999999999873221 1224566777888999888
Q ss_pred eec-CCCCCCCCceEEEEEeec
Q psy13508 473 IFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 473 i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
.+- +..+-++..-.|++|..-
T Consensus 224 ~~~~~vp~~p~g~~~f~~as~~ 245 (294)
T 3adn_A 224 FYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp EEEEECTTSSSSEEEEEEEESC
T ss_pred EEEEEecccCCCceEEEEEeCC
Confidence 654 444556666688888753
No 82
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.52 E-value=0.00083 Score=72.13 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC---cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV---KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv---~~~GDI~~~~~~~~l 389 (621)
++|. +|||+|||+|+|+-+++.+ .++++|+|+.+.. +....++++ ..|+ ...+|+.+
T Consensus 213 ~~g~--~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~a-------l~~a~~n~~-~ng~~~~~~~~D~~~------- 272 (393)
T 4dmg_A 213 RPGE--RVLDVYSYVGGFALRAARK---GAYALAVDKDLEA-------LGVLDQAAL-RLGLRVDIRHGEALP------- 272 (393)
T ss_dssp CTTC--EEEEESCTTTHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHHHH-HHTCCCEEEESCHHH-------
T ss_pred cCCC--eEEEcccchhHHHHHHHHc---CCeEEEEECCHHH-------HHHHHHHHH-HhCCCCcEEEccHHH-------
Confidence 5566 8999999999999999874 3559999997521 000000110 1122 12444432
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
.+.. ..+. +|+|++|...-..+...... ..+....-+..+..+|+|||.+++=...... ....+...+...+
T Consensus 273 --~l~~-~~~~-fD~Ii~dpP~f~~~~~~~~~--~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~-~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 273 --TLRG-LEGP-FHHVLLDPPTLVKRPEELPA--MKRHLVDLVREALRLLAEEGFLWLSSCSYHL-RLEDLLEVARRAA 344 (393)
T ss_dssp --HHHT-CCCC-EEEEEECCCCCCSSGGGHHH--HHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-CHHHHHHHHHHHH
T ss_pred --HHHH-hcCC-CCEEEECCCcCCCCHHHHHH--HHHHHHHHHHHHHHhcCCCCEEEEEECCCCC-CHHHHHHHHHHHH
Confidence 1211 1244 99999994321112222211 1222333344788999999999966665432 2445555554443
No 83
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.51 E-value=0.00016 Score=69.43 Aligned_cols=124 Identities=10% Similarity=-0.060 Sum_probs=74.4
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++..+..+ .+.++++|+|+.+.. .....+++. ....+ ...||+.+.-
T Consensus 39 ~~~~--~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 103 (204)
T 3e05_A 39 QDDL--VMWDIGAGSASVSIEASNL-MPNGRIFALERNPQY-------LGFIRDNLKKFVARNVTLVEAFAPEGL----- 103 (204)
T ss_dssp CTTC--EEEEETCTTCHHHHHHHHH-CTTSEEEEEECCHHH-------HHHHHHHHHHHTCTTEEEEECCTTTTC-----
T ss_pred CCCC--EEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCHHH-------HHHHHHHHHHhCCCcEEEEeCChhhhh-----
Confidence 4565 8999999999999998875 457899999987420 000000000 00011 3466765421
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-c
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-Y 468 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F 468 (621)
.....+|+|++++... +.. ..+..+.++|+|||.+++-.....+ ...+...+... |
T Consensus 104 -------~~~~~~D~i~~~~~~~-----~~~---------~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~l~~~g~ 160 (204)
T 3e05_A 104 -------DDLPDPDRVFIGGSGG-----MLE---------EIIDAVDRRLKSEGVIVLNAVTLDT--LTKAVEFLEDHGY 160 (204)
T ss_dssp -------TTSCCCSEEEESCCTT-----CHH---------HHHHHHHHHCCTTCEEEEEECBHHH--HHHHHHHHHHTTC
T ss_pred -------hcCCCCCEEEECCCCc-----CHH---------HHHHHHHHhcCCCeEEEEEeccccc--HHHHHHHHHHCCC
Confidence 0125699999998653 111 1233567789999999997765322 34555666654 5
Q ss_pred ceeEeec
Q psy13508 469 KQVCIFK 475 (621)
Q Consensus 469 ~~V~i~K 475 (621)
.+.+..
T Consensus 161 -~~~~~~ 166 (204)
T 3e05_A 161 -MVEVAC 166 (204)
T ss_dssp -EEEEEE
T ss_pred -ceeEEE
Confidence 544443
No 84
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.50 E-value=7.1e-05 Score=73.75 Aligned_cols=104 Identities=14% Similarity=0.079 Sum_probs=64.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~ 392 (621)
+++. +|||+|||+|.|+.++..+ ..+++|+|+.+. ......+.+ ....+|+.+.
T Consensus 40 ~~~~--~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~~~~a~~~~-----~~~~~d~~~~--------- 93 (240)
T 3dli_A 40 KGCR--RVLDIGCGRGEFLELCKEE---GIESIGVDINED-------MIKFCEGKF-----NVVKSDAIEY--------- 93 (240)
T ss_dssp TTCS--CEEEETCTTTHHHHHHHHH---TCCEEEECSCHH-------HHHHHHTTS-----EEECSCHHHH---------
T ss_pred cCCC--eEEEEeCCCCHHHHHHHhC---CCcEEEEECCHH-------HHHHHHhhc-----ceeeccHHHH---------
Confidence 4555 8999999999999988875 457999998742 000000000 0234444321
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+ ..+....+|+|+|-+....-+.++... .+..+.++|+|||.+++-+...
T Consensus 94 ~-~~~~~~~fD~i~~~~~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 94 L-KSLPDKYLDGVMISHFVEHLDPERLFE---------LLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp H-HTSCTTCBSEEEEESCGGGSCGGGHHH---------HHHHHHHHBCTTCCEEEEEECT
T ss_pred h-hhcCCCCeeEEEECCchhhCCcHHHHH---------HHHHHHHHcCCCcEEEEEeCCc
Confidence 1 112457899999987665444333322 1224567899999999988764
No 85
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.49 E-value=0.00036 Score=72.66 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=68.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCC----CCCCccc-cCCC-cccccCCChhh
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAG----PSETFEP-YYGV-KGNGDVYDPEN 385 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~----~~~~~~~-~~Gv-~~~GDI~~~~~ 385 (621)
.+|. +|||+|||+|+++.+++.+.++.++++|+|+.+.. ......+... ....+.. ...+ ...||+.+..
T Consensus 104 ~~g~--~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~- 180 (336)
T 2b25_A 104 NPGD--TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT- 180 (336)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCC--EEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc-
Confidence 4565 89999999999999998876777899999987520 0000000000 0000000 0112 3567877631
Q ss_pred HHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHH
Q psy13508 386 ILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLY 465 (621)
Q Consensus 386 ~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~ 465 (621)
.. + ....+|+|++|+..... .+..+..+|+|||.+++-..... ....++..+.
T Consensus 181 -~~----~----~~~~fD~V~~~~~~~~~----------------~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~ 233 (336)
T 2b25_A 181 -ED----I----KSLTFDAVALDMLNPHV----------------TLPVFYPHLKHGGVCAVYVVNIT--QVIELLDGIR 233 (336)
T ss_dssp ----------------EEEEEECSSSTTT----------------THHHHGGGEEEEEEEEEEESSHH--HHHHHHHHHH
T ss_pred -cc----c----CCCCeeEEEECCCCHHH----------------HHHHHHHhcCCCcEEEEEeCCHH--HHHHHHHHHH
Confidence 01 1 23469999999753221 12346789999999997665431 1334444444
Q ss_pred h
Q psy13508 466 R 466 (621)
Q Consensus 466 ~ 466 (621)
.
T Consensus 234 ~ 234 (336)
T 2b25_A 234 T 234 (336)
T ss_dssp H
T ss_pred h
Confidence 3
No 86
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.49 E-value=0.0011 Score=65.54 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=70.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+|||+|.++.+++.+.++.++++|+|+.+.. .....+.+...+| + ...+|+.+..
T Consensus 95 ~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~-------~~~a~~~~~~~~g~~~v~~~~~d~~~~~---- 161 (258)
T 2pwy_A 95 APGM--RVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHH-------LAQAERNVRAFWQVENVRFHLGKLEEAE---- 161 (258)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHH-------HHHHHHHHHHHCCCCCEEEEESCGGGCC----
T ss_pred CCCC--EEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCCCEEEEECchhhcC----
Confidence 5565 89999999999999999876667899999986420 0000000000001 1 3456665421
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS- 467 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~- 467 (621)
+....+|+|++|... ..+ .+..+..+|+|||.+++-..... ....++..|...
T Consensus 162 --------~~~~~~D~v~~~~~~-------~~~---------~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~g 215 (258)
T 2pwy_A 162 --------LEEAAYDGVALDLME-------PWK---------VLEKAALALKPDRFLVAYLPNIT--QVLELVRAAEAHP 215 (258)
T ss_dssp --------CCTTCEEEEEEESSC-------GGG---------GHHHHHHHEEEEEEEEEEESCHH--HHHHHHHHHTTTT
T ss_pred --------CCCCCcCEEEECCcC-------HHH---------HHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHHCC
Confidence 123579999998531 111 12235678999999998765421 133455555433
Q ss_pred cceeE
Q psy13508 468 YKQVC 472 (621)
Q Consensus 468 F~~V~ 472 (621)
|..+.
T Consensus 216 f~~~~ 220 (258)
T 2pwy_A 216 FRLER 220 (258)
T ss_dssp EEEEE
T ss_pred CceEE
Confidence 55443
No 87
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.48 E-value=8.6e-05 Score=72.18 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=60.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|+++.+++.+....++++|+|+.+.. .....+.+ ...| + ...||..+ ....+
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~--~~~~~---- 126 (223)
T 3duw_A 61 NILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKH-------ADIARSNI-ERANLNDRVEVRTGLALD--SLQQI---- 126 (223)
T ss_dssp EEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEESCHHH--HHHHH----
T ss_pred EEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHH-HHcCCCCcEEEEEcCHHH--HHHHH----
Confidence 89999999999999999876547899999986420 00000000 0011 1 34566542 11111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
... ....+|+|++|+... ... ..+..+..+|+|||.+|+-
T Consensus 127 ~~~-~~~~fD~v~~d~~~~-----~~~---------~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 127 ENE-KYEPFDFIFIDADKQ-----NNP---------AYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHT-TCCCCSEEEECSCGG-----GHH---------HHHHHHHHTCCTTCEEEEE
T ss_pred Hhc-CCCCcCEEEEcCCcH-----HHH---------HHHHHHHHhcCCCcEEEEe
Confidence 111 125799999998631 111 1233466899999998875
No 88
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.47 E-value=6.2e-05 Score=73.55 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=65.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+. +.++++|+|+.+.. .....+.+.....+ ...||+.+.. .
T Consensus 47 ~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~d~~~~~------------~ 106 (234)
T 3dtn_A 47 DILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKM-------LEIAKNRFRGNLKVKYIEADYSKYD------------F 106 (234)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHH-------HHHHHHHTCSCTTEEEEESCTTTCC------------C
T ss_pred eEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHH-------HHHHHHhhccCCCEEEEeCchhccC------------C
Confidence 89999999999999998764 56899999997420 00000000000022 4567877632 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|++......-..... ...+..+.++|+|||.+++-.+..
T Consensus 107 -~~~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 107 -EEKYDMVVSALSIHHLEDEDK---------KELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp -CSCEEEEEEESCGGGSCHHHH---------HHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -CCCceEEEEeCccccCCHHHH---------HHHHHHHHHhcCCCcEEEEEEecC
Confidence 268999999976543322111 112234568899999999887664
No 89
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.46 E-value=0.00058 Score=68.09 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=59.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|+++.+++.+....++++|+|+.+.. .....+.+. ..| + ...||+.+ . +
T Consensus 66 ~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~-------~~~a~~~~~-~~g~~~~v~~~~~d~~~-----~----l 128 (248)
T 3tfw_A 66 RILEIGTLGGYSTIWMARELPADGQLLTLEADAHH-------AQVARENLQ-LAGVDQRVTLREGPALQ-----S----L 128 (248)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHH-------HHHHHHHHH-HTTCTTTEEEEESCHHH-----H----H
T ss_pred EEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEEcCHHH-----H----H
Confidence 89999999999999999876557899999987420 000000000 011 1 23455432 1 1
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
........+|+|++|+.. .+... .+..+..+|||||.+|+=
T Consensus 129 ~~~~~~~~fD~V~~d~~~-----~~~~~---------~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDADK-----PNNPH---------YLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HTCCSCCCCSEEEECSCG-----GGHHH---------HHHHHHHTCCTTCEEEEE
T ss_pred HhcCCCCCeEEEEECCch-----HHHHH---------HHHHHHHhcCCCeEEEEe
Confidence 111123589999999842 11111 233456899999998873
No 90
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.45 E-value=0.0005 Score=69.54 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=73.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+|||+|+++..++.+..+.++++|+|+.+.. .....+++....| + ...||+.++
T Consensus 109 ~~~~--~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~-------~~~a~~~~~~~~g~~~v~~~~~d~~~~----- 174 (275)
T 1yb2_A 109 RPGM--DILEVGVGSGNMSSYILYALNGKGTLTVVERDEDN-------LKKAMDNLSEFYDIGNVRTSRSDIADF----- 174 (275)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHH-------HHHHHHHHHTTSCCTTEEEECSCTTTC-----
T ss_pred CCcC--EEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHH-------HHHHHHHHHhcCCCCcEEEEECchhcc-----
Confidence 5565 89999999999999998875667899999986420 0000000000001 1 346777652
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS- 467 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~- 467 (621)
.....+|+|++|.. +.+. .+..+..+|+|||.+++-..... ....+...|...
T Consensus 175 --------~~~~~fD~Vi~~~~-------~~~~---------~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~G 228 (275)
T 1yb2_A 175 --------ISDQMYDAVIADIP-------DPWN---------HVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASG 228 (275)
T ss_dssp --------CCSCCEEEEEECCS-------CGGG---------SHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGT
T ss_pred --------CcCCCccEEEEcCc-------CHHH---------HHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCC
Confidence 12457999999752 1111 12235678999999998775421 123455555543
Q ss_pred cceeEeec
Q psy13508 468 YKQVCIFK 475 (621)
Q Consensus 468 F~~V~i~K 475 (621)
|..+.+++
T Consensus 229 f~~~~~~~ 236 (275)
T 1yb2_A 229 MHHLETVE 236 (275)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 66665554
No 91
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.45 E-value=0.00058 Score=63.69 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=73.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
.++. ++||+|||+|.++.++..+. .+++|+|+.+.. .....+.+. ..| + ...+|+.+
T Consensus 32 ~~~~--~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~-------~~~a~~~~~-~~~~~~~~~~~~~d~~~----- 93 (192)
T 1l3i_A 32 GKND--VAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEA-------ISTTEMNLQ-RHGLGDNVTLMEGDAPE----- 93 (192)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHTTS---SEEEEEESCHHH-------HHHHHHHHH-HTTCCTTEEEEESCHHH-----
T ss_pred CCCC--EEEEECCCCCHHHHHHHHhc---CEEEEEECCHHH-------HHHHHHHHH-HcCCCcceEEEecCHHH-----
Confidence 4455 89999999999999888753 799999986420 000000000 011 1 23444432
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
.+. ....+|+|++++... .. ...+..+.++|+|||.+++-.+... ....+...+...
T Consensus 94 ----~~~---~~~~~D~v~~~~~~~-----~~---------~~~l~~~~~~l~~gG~l~~~~~~~~--~~~~~~~~l~~~ 150 (192)
T 1l3i_A 94 ----ALC---KIPDIDIAVVGGSGG-----EL---------QEILRIIKDKLKPGGRIIVTAILLE--TKFEAMECLRDL 150 (192)
T ss_dssp ----HHT---TSCCEEEEEESCCTT-----CH---------HHHHHHHHHTEEEEEEEEEEECBHH--HHHHHHHHHHHT
T ss_pred ----hcc---cCCCCCEEEECCchH-----HH---------HHHHHHHHHhcCCCcEEEEEecCcc--hHHHHHHHHHHC
Confidence 111 124799999997541 11 1123346789999999999887642 244566667665
Q ss_pred -cceeEeecCCC
Q psy13508 468 -YKQVCIFKPNT 478 (621)
Q Consensus 468 -F~~V~i~KP~a 478 (621)
| .+.+.+...
T Consensus 151 g~-~~~~~~~~~ 161 (192)
T 1l3i_A 151 GF-DVNITELNI 161 (192)
T ss_dssp TC-CCEEEEEEE
T ss_pred CC-ceEEEEEEc
Confidence 6 566555443
No 92
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.44 E-value=0.00077 Score=64.47 Aligned_cols=122 Identities=10% Similarity=0.021 Sum_probs=75.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. ++||+|||+|.++.++..+ ...+++|+|+.+.. .....+.+. ...++ ...+|+.+.
T Consensus 59 ~~~~--~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~v~~~~~d~~~~------ 121 (205)
T 3grz_A 59 VKPL--TVADVGTGSGILAIAAHKL--GAKSVLATDISDES-------MTAAEENAALNGIYDIALQKTSLLAD------ 121 (205)
T ss_dssp SSCC--EEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHH-------HHHHHHHHHHTTCCCCEEEESSTTTT------
T ss_pred cCCC--EEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHH-------HHHHHHHHHHcCCCceEEEecccccc------
Confidence 3454 8999999999999987753 35699999987420 000000000 00012 456777652
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-c
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-Y 468 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F 468 (621)
....+|+|+++.... . ....+..+.++|+|||.+++-.+.... ...+...+... |
T Consensus 122 --------~~~~fD~i~~~~~~~--------~------~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~Gf 177 (205)
T 3grz_A 122 --------VDGKFDLIVANILAE--------I------LLDLIPQLDSHLNEDGQVIFSGIDYLQ--LPKIEQALAENSF 177 (205)
T ss_dssp --------CCSCEEEEEEESCHH--------H------HHHHGGGSGGGEEEEEEEEEEEEEGGG--HHHHHHHHHHTTE
T ss_pred --------CCCCceEEEECCcHH--------H------HHHHHHHHHHhcCCCCEEEEEecCccc--HHHHHHHHHHcCC
Confidence 146899999986431 0 112234677899999999997665422 45666777655 7
Q ss_pred ceeEeec
Q psy13508 469 KQVCIFK 475 (621)
Q Consensus 469 ~~V~i~K 475 (621)
+.+.+.+
T Consensus 178 ~~~~~~~ 184 (205)
T 3grz_A 178 QIDLKMR 184 (205)
T ss_dssp EEEEEEE
T ss_pred ceEEeec
Confidence 7666554
No 93
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.44 E-value=0.00015 Score=72.47 Aligned_cols=103 Identities=13% Similarity=0.116 Sum_probs=66.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++..+..+ +.++++|+|+.+.. .....+.+ ...| + ...+|+.+..
T Consensus 45 ~~~~--~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~~~--- 109 (267)
T 3kkz_A 45 TEKS--LIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGF-------IDIFNRNA-RQSGLQNRVTGIVGSMDDLP--- 109 (267)
T ss_dssp CTTC--EEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEECCTTSCC---
T ss_pred CCCC--EEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHH-------HHHHHHHH-HHcCCCcCcEEEEcChhhCC---
Confidence 4555 8999999999999999876 56799999997520 00000000 0011 2 3567776532
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+....+|+|+|.+.....+ .. ..+..+.++|+|||.+++-...
T Consensus 110 ---------~~~~~fD~i~~~~~~~~~~---~~---------~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 110 ---------FRNEELDLIWSEGAIYNIG---FE---------RGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp ---------CCTTCEEEEEESSCGGGTC---HH---------HHHHHHGGGEEEEEEEEEEEEE
T ss_pred ---------CCCCCEEEEEEcCCceecC---HH---------HHHHHHHHHcCCCCEEEEEEee
Confidence 1346899999998764431 11 1233567899999999987653
No 94
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.43 E-value=0.001 Score=67.06 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=65.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+++. +|||+|||+|+++.++..+.+ .+++|+|+.+.. ......+..... ...+ ...+|+.+
T Consensus 63 ~~~~--~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~-------- 125 (287)
T 1kpg_A 63 QPGM--TLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQ-------- 125 (287)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGG--------
T ss_pred CCcC--EEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhh--------
Confidence 4555 899999999999999986653 599999987421 000000000000 0011 24566542
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
. +..+|+|+|-+....-+.++... .+..+.++|||||.+++-.+..
T Consensus 126 ------~-~~~fD~v~~~~~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 126 ------F-DEPVDRIVSIGAFEHFGHERYDA---------FFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ------C-CCCCSEEEEESCGGGTCTTTHHH---------HHHHHHHHSCTTCEEEEEEEEE
T ss_pred ------C-CCCeeEEEEeCchhhcChHHHHH---------HHHHHHHhcCCCCEEEEEEecC
Confidence 1 25799999988665444333322 1234567899999999988764
No 95
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.43 E-value=8.4e-05 Score=70.54 Aligned_cols=107 Identities=21% Similarity=0.139 Sum_probs=60.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|+++..++.+ ...+++|+|+.+. ++....+++. ....+ ..+||+.+. . .
T Consensus 47 ~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~-------~~~~a~~~~~~~~~~~v~~~~~d~~~~---------~-~ 107 (189)
T 3p9n_A 47 AVLDLYAGSGALGLEALSR--GAASVLFVESDQR-------SAAVIARNIEALGLSGATLRRGAVAAV---------V-A 107 (189)
T ss_dssp EEEEETCTTCHHHHHHHHT--TCSEEEEEECCHH-------HHHHHHHHHHHHTCSCEEEEESCHHHH---------H-H
T ss_pred EEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHH-------HHHHHHHHHHHcCCCceEEEEccHHHH---------H-h
Confidence 8999999999999987764 3568999998742 0000000000 00012 345666431 1 1
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
......+|+|++|...... .+..++. + +.+....+|+|||.+++-....
T Consensus 108 ~~~~~~fD~i~~~~p~~~~-~~~~~~~------l-~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 108 AGTTSPVDLVLADPPYNVD-SADVDAI------L-AALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HCCSSCCSEEEECCCTTSC-HHHHHHH------H-HHHHHSSSCCTTCEEEEEEETT
T ss_pred hccCCCccEEEECCCCCcc-hhhHHHH------H-HHHHhcCccCCCeEEEEEecCC
Confidence 1235689999999654321 1111111 1 1111134899999999977653
No 96
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.41 E-value=0.00024 Score=68.77 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=69.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccC-CC-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYY-GV-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~-Gv-~~~GDI~~~~~~~~ 388 (621)
++++ +|||+|||+|.++.++..+ .++++|+|+.+.. .....++.. ... .+ ...||+.+.
T Consensus 54 ~~~~--~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~-------~~~a~~~~~~~g~~~~v~~~~~d~~~~----- 116 (204)
T 3njr_A 54 RRGE--LLWDIGGGSGSVSVEWCLA---GGRAITIEPRADR-------IENIQKNIDTYGLSPRMRAVQGTAPAA----- 116 (204)
T ss_dssp CTTC--EEEEETCTTCHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHHHHHTTCTTTEEEEESCTTGG-----
T ss_pred CCCC--EEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHH-------HHHHHHHHHHcCCCCCEEEEeCchhhh-----
Confidence 4555 8999999999999998875 6799999987520 000000000 001 12 346777651
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
+ .....+|+|+++++.+ .. .+..+...|+|||.+|+-.....+ ...++..++..
T Consensus 117 ----~---~~~~~~D~v~~~~~~~--------------~~--~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~l~~~ 170 (204)
T 3njr_A 117 ----L---ADLPLPEAVFIGGGGS--------------QA--LYDRLWEWLAPGTRIVANAVTLES--ETLLTQLHARH 170 (204)
T ss_dssp ----G---TTSCCCSEEEECSCCC--------------HH--HHHHHHHHSCTTCEEEEEECSHHH--HHHHHHHHHHH
T ss_pred ----c---ccCCCCCEEEECCccc--------------HH--HHHHHHHhcCCCcEEEEEecCccc--HHHHHHHHHhC
Confidence 0 0124699999998441 01 223456789999999998876422 44555666654
No 97
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.40 E-value=0.0011 Score=67.93 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+++. +|||+|||+|+++.++..+. .++++|+|+.+.. ......+...... ..+ ...+|+.+.
T Consensus 89 ~~~~--~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~------- 152 (318)
T 2fk8_A 89 KPGM--TLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTN-----RSRQVLLQGWEDF------- 152 (318)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCS-----SCEEEEESCGGGC-------
T ss_pred CCcC--EEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCC-----CceEEEECChHHC-------
Confidence 4565 89999999999999998765 4699999987421 0000000000000 011 235565431
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT 454 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~ 454 (621)
+..+|+|++.+.....+.++.... +..+.++|+|||.+++-.+....
T Consensus 153 --------~~~fD~v~~~~~l~~~~~~~~~~~---------l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 --------AEPVDRIVSIEAFEHFGHENYDDF---------FKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp --------CCCCSEEEEESCGGGTCGGGHHHH---------HHHHHHHSCTTCEEEEEEEECCC
T ss_pred --------CCCcCEEEEeChHHhcCHHHHHHH---------HHHHHHhcCCCcEEEEEEeccCC
Confidence 257999999987655443333221 23456889999999998887543
No 98
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.40 E-value=0.0009 Score=69.20 Aligned_cols=128 Identities=13% Similarity=0.093 Sum_probs=76.9
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENIL 387 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~ 387 (621)
+++++ +|||+||||||++..++.+. ..++++|+|+.+. ++....+.+ ...| + ..+||..+.
T Consensus 120 l~~g~--rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~-------~l~~Ar~~~-~~~gl~~v~~v~gDa~~l---- 184 (298)
T 3fpf_A 120 FRRGE--RAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPD-------IAELSRKVI-EGLGVDGVNVITGDETVI---- 184 (298)
T ss_dssp CCTTC--EEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHH-------HHHHHHHHH-HHHTCCSEEEEESCGGGG----
T ss_pred CCCcC--EEEEECCCccHHHHHHHHHc-cCCEEEEEECCHH-------HHHHHHHHH-HhcCCCCeEEEECchhhC----
Confidence 46777 89999999999998776553 4689999999752 110000000 0011 2 456777641
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC-ChHHHHHHHHh
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP-FSAGLLYLLYR 466 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~-~s~~ll~~l~~ 466 (621)
....+|+|++++.. ++... .+..+.++|||||.+|+....+... ...........
T Consensus 185 ----------~d~~FDvV~~~a~~-----~d~~~---------~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~ 240 (298)
T 3fpf_A 185 ----------DGLEFDVLMVAALA-----EPKRR---------VFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT 240 (298)
T ss_dssp ----------GGCCCSEEEECTTC-----SCHHH---------HHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT
T ss_pred ----------CCCCcCEEEECCCc-----cCHHH---------HHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh
Confidence 13579999998752 22211 1224678899999999987553110 00000012334
Q ss_pred ccceeEeecCCC
Q psy13508 467 SYKQVCIFKPNT 478 (621)
Q Consensus 467 ~F~~V~i~KP~a 478 (621)
-|+....+-|..
T Consensus 241 gf~~~~~~~p~~ 252 (298)
T 3fpf_A 241 GFRRAGVVLPSG 252 (298)
T ss_dssp TEEEEEEECCCT
T ss_pred hhhheeEECCCC
Confidence 688888888865
No 99
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.40 E-value=9.1e-05 Score=75.62 Aligned_cols=107 Identities=16% Similarity=0.069 Sum_probs=64.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----cCCC-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----YYGV-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~~Gv-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++..+..+.....+++|+|+.+. ++....+.+.. ...+ ...+|+.+.....
T Consensus 39 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~-------~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~------ 105 (299)
T 3g5t_A 39 LLVDVGCGPGTATLQMAQELKPFEQIIGSDLSAT-------MIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG------ 105 (299)
T ss_dssp EEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHH-------HHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC------
T ss_pred EEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHH-------HHHHHHHHHHhccCCCCceEEEEcCHHhCCccc------
Confidence 8999999999999999976546789999999752 00000000000 0112 4577887633110
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
........+|+|+|-...... +.. ..+..+.++|+|||.+++-.+
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~---~~~---------~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF---DFE---------KFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS---CHH---------HHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh---CHH---------HHHHHHHHhcCCCcEEEEEec
Confidence 000112689999998765443 111 122345678999999998333
No 100
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.40 E-value=0.00013 Score=70.45 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=62.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++.++..+ .++++|+|+.+. +.....+.+. ..+ ...||+.+.. .
T Consensus 48 ~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~-------~~~~a~~~~~--~~~~~~~~d~~~~~------------~ 103 (220)
T 3hnr_A 48 NVLEFGVGTGNLTNKLLLA---GRTVYGIEPSRE-------MRMIAKEKLP--KEFSITEGDFLSFE------------V 103 (220)
T ss_dssp EEEEECCTTSHHHHHHHHT---TCEEEEECSCHH-------HHHHHHHHSC--TTCCEESCCSSSCC------------C
T ss_pred eEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHH-------HHHHHHHhCC--CceEEEeCChhhcC------------C
Confidence 8999999999999999875 578999998742 0000000000 112 4567877632 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
. ..+|+|+|.........+.. ...+..+.++|+|||.+++-...
T Consensus 104 ~-~~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 104 P-TSIDTIVSTYAFHHLTDDEK---------NVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp C-SCCSEEEEESCGGGSCHHHH---------HHHHHHHHHHSCTTCEEEEEEEC
T ss_pred C-CCeEEEEECcchhcCChHHH---------HHHHHHHHHhcCCCCEEEEEecc
Confidence 2 68999999976643322111 11233456889999999998644
No 101
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.39 E-value=0.00013 Score=67.61 Aligned_cols=122 Identities=14% Similarity=0.138 Sum_probs=74.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
.++. ++||+|||+|.++.++..+. .+++|+|+.+.. .....+. ...+ ...+| .
T Consensus 16 ~~~~--~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~-------~~~a~~~---~~~v~~~~~d-~---------- 69 (170)
T 3i9f_A 16 GKKG--VIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIA-------LKEVKEK---FDSVITLSDP-K---------- 69 (170)
T ss_dssp SCCE--EEEEETCTTCTTHHHHHTTE---EEEEEECSCHHH-------HHHHHHH---CTTSEEESSG-G----------
T ss_pred CCCC--eEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHH-------HHHHHHh---CCCcEEEeCC-C----------
Confidence 4454 89999999999999998754 389999986420 0000000 0112 23455 0
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC----------ChHHHH
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP----------FSAGLL 461 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~----------~s~~ll 461 (621)
.+....+|+|++........ +.+ ..+..+.++|+|||.+++-.+..... ...++.
T Consensus 70 ----~~~~~~~D~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (170)
T 3i9f_A 70 ----EIPDNSVDFILFANSFHDMD--DKQ---------HVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYM 134 (170)
T ss_dssp ----GSCTTCEEEEEEESCSTTCS--CHH---------HHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHH
T ss_pred ----CCCCCceEEEEEccchhccc--CHH---------HHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHH
Confidence 12356899999987664432 221 11224567899999999987753211 134566
Q ss_pred HHHHhccceeEeecC
Q psy13508 462 YLLYRSYKQVCIFKP 476 (621)
Q Consensus 462 ~~l~~~F~~V~i~KP 476 (621)
..|. =|+.+.+...
T Consensus 135 ~~l~-Gf~~~~~~~~ 148 (170)
T 3i9f_A 135 GWFS-NFVVEKRFNP 148 (170)
T ss_dssp HHTT-TEEEEEEECS
T ss_pred HHHh-CcEEEEccCC
Confidence 6677 7877776654
No 102
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.39 E-value=0.00015 Score=69.52 Aligned_cols=104 Identities=11% Similarity=0.024 Sum_probs=66.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+ ..+++|+|+.+.. ...... .....+ ...||+.+.
T Consensus 45 ~~~~--~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~-------~~~a~~--~~~~~~~~~~~d~~~~-------- 102 (218)
T 3ou2_A 45 NIRG--DVLELASGTGYWTRHLSGL---ADRVTALDGSAEM-------IAEAGR--HGLDNVEFRQQDLFDW-------- 102 (218)
T ss_dssp TSCS--EEEEESCTTSHHHHHHHHH---SSEEEEEESCHHH-------HHHHGG--GCCTTEEEEECCTTSC--------
T ss_pred CCCC--eEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHH-------HHHHHh--cCCCCeEEEecccccC--------
Confidence 4454 8999999999999999876 4699999987420 000000 000112 456787753
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
.....+|+|++......-..+. ....+..+.++|+|||.+++-.+..
T Consensus 103 -----~~~~~~D~v~~~~~l~~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 103 -----TPDRQWDAVFFAHWLAHVPDDR---------FEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -----CCSSCEEEEEEESCGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -----CCCCceeEEEEechhhcCCHHH---------HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 1357899999987554332211 1122334568899999999998875
No 103
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.39 E-value=0.0025 Score=68.00 Aligned_cols=147 Identities=13% Similarity=0.099 Sum_probs=84.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|+|+..+.++.+...+++|+|+.+.. .... ..+ ...||+.+..
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~-------~~~a-------~~~~~~~~D~~~~~------------- 94 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKA-------LDLP-------PWAEGILADFLLWE------------- 94 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTT-------CCCC-------TTEEEEESCGGGCC-------------
T ss_pred EEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHH-------HHhC-------CCCcEEeCChhhcC-------------
Confidence 89999999999999999876556899999997531 1110 112 3467776421
Q ss_pred CCCcccEEEecCCCCCCCc---------hhhHHHHH---------HHHHHHHHHhhhhccCCCcEEEEEEccC--CCCCh
Q psy13508 398 KGRGVHFMMADGGFSVEGQ---------ENIQEILS---------KRLYLCQFLVSLFIVRPEGHFVCKVFDM--FTPFS 457 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~---------~~~de~~~---------~~L~l~~l~~al~~Lr~GG~fV~K~F~~--~~~~s 457 (621)
...++|+|+++--....+. ....+... ..+...-+..+..+|+|||.+++-+-.. +....
T Consensus 95 ~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~ 174 (421)
T 2ih2_A 95 PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDF 174 (421)
T ss_dssp CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGG
T ss_pred ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccH
Confidence 1357999999843322221 11111000 0122333457889999999999887553 12234
Q ss_pred HHHHHHHH-hccceeEeecCCCCCCCCceEEEEEeec
Q psy13508 458 AGLLYLLY-RSYKQVCIFKPNTSRPANSERYIVCKWK 493 (621)
Q Consensus 458 ~~ll~~l~-~~F~~V~i~KP~aSR~~ssE~YlVc~g~ 493 (621)
..+...+. ..+..+..+. ........+..++....
T Consensus 175 ~~lr~~l~~~~~~~i~~l~-~~F~~~~~~~~il~~~k 210 (421)
T 2ih2_A 175 ALLREFLAREGKTSVYYLG-EVFPQKKVSAVVIRFQK 210 (421)
T ss_dssp HHHHHHHHHHSEEEEEEEE-SCSTTCCCCEEEEEEES
T ss_pred HHHHHHHHhcCCeEEEECC-CCCCCCCccEEEEEEEe
Confidence 56665544 4343444332 33334455555554433
No 104
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.38 E-value=6.8e-05 Score=79.90 Aligned_cols=113 Identities=12% Similarity=0.027 Sum_probs=70.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc--------c--CCC-cccccCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP--------Y--YGV-KGNGDVY 381 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~--------~--~Gv-~~~GDI~ 381 (621)
.++. +|||||||+|.|+..+..+.++.++++|+|+.+.. .....+.+.. . ..+ ...||+.
T Consensus 82 ~~~~--~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~-------l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~ 152 (383)
T 4fsd_A 82 LEGA--TVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQ-------LEVARKYVEYHAEKFFGSPSRSNVRFLKGFIE 152 (383)
T ss_dssp GTTC--EEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHH-------HHHHHHTHHHHHHHHHSSTTCCCEEEEESCTT
T ss_pred CCCC--EEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHH-------HHHHHHHHHHhhhhcccccCCCceEEEEccHH
Confidence 3454 89999999999999999887677899999997420 0000000000 0 112 4578887
Q ss_pred ChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 382 DPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 382 ~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+..... ...+....+|+|+|.+......+ .. ..+..+.++|||||.|++-.+.
T Consensus 153 ~l~~~~------~~~~~~~~fD~V~~~~~l~~~~d--~~---------~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 153 NLATAE------PEGVPDSSVDIVISNCVCNLSTN--KL---------ALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CGGGCB------SCCCCTTCEEEEEEESCGGGCSC--HH---------HHHHHHHHHEEEEEEEEEEEEE
T ss_pred Hhhhcc------cCCCCCCCEEEEEEccchhcCCC--HH---------HHHHHHHHHcCCCCEEEEEEec
Confidence 642110 00123568999999987654322 11 2233567899999999987654
No 105
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.38 E-value=0.0016 Score=63.90 Aligned_cols=128 Identities=10% Similarity=-0.062 Sum_probs=76.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+|||+|.++.+++.+. ..+++|+|+.+.. +....+.+. ..| + ...+|+.+..
T Consensus 82 ~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~~~~~~~~d~~~~~---------- 141 (241)
T 2ex4_A 82 CALDCGAGIGRITKRLLLPL--FREVDMVDITEDF-------LVQAKTYLG-EEGKRVRNYFCCGLQDFT---------- 141 (241)
T ss_dssp EEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHH-------HHHHHHHTG-GGGGGEEEEEECCGGGCC----------
T ss_pred EEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHH-------HHHHHHHhh-hcCCceEEEEEcChhhcC----------
Confidence 89999999999999887653 5689999987420 000000000 000 1 3455654321
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC------------CCChHHHHH
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF------------TPFSAGLLY 462 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~------------~~~s~~ll~ 462 (621)
.....+|+|+++.....-..+. ....+..+.++|+|||.+++..+... .....++..
T Consensus 142 --~~~~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (241)
T 2ex4_A 142 --PEPDSYDVIWIQWVIGHLTDQH---------LAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRR 210 (241)
T ss_dssp --CCSSCEEEEEEESCGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHH
T ss_pred --CCCCCEEEEEEcchhhhCCHHH---------HHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHH
Confidence 1245799999997653322111 11223356788999999999664321 012456777
Q ss_pred HHHhc-cceeEeecCC
Q psy13508 463 LLYRS-YKQVCIFKPN 477 (621)
Q Consensus 463 ~l~~~-F~~V~i~KP~ 477 (621)
+|... |+.+.+....
T Consensus 211 ~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 211 IICSAGLSLLAEERQE 226 (241)
T ss_dssp HHHHTTCCEEEEEECC
T ss_pred HHHHcCCeEEEeeecC
Confidence 77766 8887776543
No 106
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.37 E-value=0.0014 Score=63.01 Aligned_cols=107 Identities=14% Similarity=0.043 Sum_probs=71.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhcC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTK 398 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~~ 398 (621)
++||+|||+|.++.++ ..+++|+|+.+. .. ....+|+.+.. +.
T Consensus 70 ~vLDiG~G~G~~~~~l------~~~v~~~D~s~~--------------~~-----~~~~~d~~~~~------------~~ 112 (215)
T 2zfu_A 70 VVADFGCGDCRLASSI------RNPVHCFDLASL--------------DP-----RVTVCDMAQVP------------LE 112 (215)
T ss_dssp CEEEETCTTCHHHHHC------CSCEEEEESSCS--------------ST-----TEEESCTTSCS------------CC
T ss_pred eEEEECCcCCHHHHHh------hccEEEEeCCCC--------------Cc-----eEEEeccccCC------------CC
Confidence 7999999999999876 268999998753 00 12356776521 13
Q ss_pred CCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-cceeEee
Q psy13508 399 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 474 (621)
Q Consensus 399 ~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F~~V~i~ 474 (621)
...+|+|++...... .+... .+..+.++|+|||.+++-.+....+...++...|... |+.+...
T Consensus 113 ~~~fD~v~~~~~l~~---~~~~~---------~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG---TNIRD---------FLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp TTCEEEEEEESCCCS---SCHHH---------HHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEeEEEEehhccc---cCHHH---------HHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEe
Confidence 457999999876642 22211 1223567899999999987664323456777888766 7766643
No 107
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.35 E-value=0.00059 Score=66.31 Aligned_cols=102 Identities=15% Similarity=0.039 Sum_probs=63.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc-------cCCC-cccccCCChh
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP-------YYGV-KGNGDVYDPE 384 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-------~~Gv-~~~GDI~~~~ 384 (621)
+++. +|||+|||+|+++..+..+.++.++++|+|+.+.. .....+.+.. ...+ ...+|+.+..
T Consensus 76 ~~~~--~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 76 HEGA--KALDVGSGSGILTACFARMVGCTGKVIGIDHIKEL-------VDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHH-------HHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC
T ss_pred CCCC--EEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHH-------HHHHHHHHHhhcccccCCCcEEEEECCcccCc
Confidence 4565 89999999999999998876666899999986420 0000000000 0011 2455654311
Q ss_pred hHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 385 NILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 385 ~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
.....+|+|++++..... . ..+..+|+|||.+|+-+...
T Consensus 147 ------------~~~~~fD~i~~~~~~~~~----~-------------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 147 ------------AEEAPYDAIHVGAAAPVV----P-------------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp ------------GGGCCEEEEEECSBBSSC----C-------------HHHHHTEEEEEEEEEEESCT
T ss_pred ------------ccCCCcCEEEECCchHHH----H-------------HHHHHhcCCCcEEEEEEecC
Confidence 013479999999866211 1 13467899999999977653
No 108
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.34 E-value=0.00031 Score=69.44 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=60.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+ + ..+++|+|+.+.. +....+... ...+ ...||+.+.. +
T Consensus 47 ~vLD~GcG~G~~~~~l~~~-~-~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~~~~~d~~~~~------------~ 104 (253)
T 3g5l_A 47 TVLDLGCGFGWHCIYAAEH-G-AKKVLGIDLSERM-------LTEAKRKTT-SPVVCYEQKAIEDIA------------I 104 (253)
T ss_dssp EEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHH-------HHHHHHHCC-CTTEEEEECCGGGCC------------C
T ss_pred EEEEECCCCCHHHHHHHHc-C-CCEEEEEECCHHH-------HHHHHHhhc-cCCeEEEEcchhhCC------------C
Confidence 8999999999999999875 2 2389999987420 000000000 0112 3566765421 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
....+|+|+|....... ++.. ..+..+.++|+|||.+++-+.
T Consensus 105 ~~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYI--ASFD---------DICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CTTCEEEEEEESCGGGC--SCHH---------HHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhhh--hhHH---------HHHHHHHHHcCCCcEEEEEeC
Confidence 24689999998755332 1221 122345688999999999643
No 109
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=97.33 E-value=0.00052 Score=75.23 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=75.6
Q ss_pred CcccEEEecCCCCCCCchhhHHHHHHHHHHHHHH-hhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCC
Q psy13508 400 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL-VSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNT 478 (621)
Q Consensus 400 ~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~-~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~a 478 (621)
.++|+|..|..-.....+-.|-. -..+.+..+. -|+.+|+|||++|+|.|.--+..+..++..+.+.|..++++||..
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCe-DHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p~~ 298 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCE-DHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARPDC 298 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHH-HHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECCTT
T ss_pred CcccEEEEecCCCcccchHHHHH-HHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCCCc
Confidence 48999999998776655443322 2334454444 799999999999999999877788999999999999999999976
Q ss_pred CCCCCceEEEEEeecCC
Q psy13508 479 SRPANSERYIVCKWKRP 495 (621)
Q Consensus 479 SR~~ssE~YlVc~g~~~ 495 (621)
+. +|-|+|+|..+|..
T Consensus 299 ~~-snTEv~~~f~~~Dn 314 (670)
T 4gua_A 299 VS-SNTEMYLIFRQLDN 314 (670)
T ss_dssp CS-BTTCEEEEEEEECC
T ss_pred cc-cCceEEEEEEecCC
Confidence 54 44999999999964
No 110
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.33 E-value=0.0003 Score=67.74 Aligned_cols=126 Identities=8% Similarity=0.048 Sum_probs=74.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+ ..+++|+|+.+.. +....+.+.....+ ...+|+.+..
T Consensus 54 ~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~d~~~~~------------- 110 (216)
T 3ofk_A 54 NGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRA-------IGRACQRTKRWSHISWAATDILQFS------------- 110 (216)
T ss_dssp EEEEECCTTSHHHHHHGGG---EEEEEEEESCHHH-------HHHHHHHTTTCSSEEEEECCTTTCC-------------
T ss_pred cEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHH-------HHHHHHhcccCCCeEEEEcchhhCC-------------
Confidence 8999999999999998875 3689999987420 00000000000012 4567887632
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc--------cCCCCChHHHHHHHHhccc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF--------DMFTPFSAGLLYLLYRSYK 469 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F--------~~~~~~s~~ll~~l~~~F~ 469 (621)
....+|+|+|......-.+. ++ ....+..+.++|+|||.+++-.. ... .....+...+...+.
T Consensus 111 ~~~~fD~v~~~~~l~~~~~~--~~------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (216)
T 3ofk_A 111 TAELFDLIVVAEVLYYLEDM--TQ------MRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHV-AGAETVITILTEALT 181 (216)
T ss_dssp CSCCEEEEEEESCGGGSSSH--HH------HHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCS-CCHHHHHHHHHHHSE
T ss_pred CCCCccEEEEccHHHhCCCH--HH------HHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhh-hhHHHHHHHHHhhcc
Confidence 24689999998655432221 11 11223356789999999998542 211 123445566666677
Q ss_pred eeEeecC
Q psy13508 470 QVCIFKP 476 (621)
Q Consensus 470 ~V~i~KP 476 (621)
.+..+..
T Consensus 182 ~~e~~~~ 188 (216)
T 3ofk_A 182 EVERVQC 188 (216)
T ss_dssp EEEEEEE
T ss_pred ceEEEec
Confidence 6665544
No 111
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.33 E-value=0.0033 Score=61.17 Aligned_cols=101 Identities=15% Similarity=0.085 Sum_probs=57.4
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc-cCCC-cccccCCChhhHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP-YYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+++. +|||+|||+|.++..+..+ .+++|+|+.+.. .....+.... ...+ ...+|+.+..
T Consensus 32 ~~~~--~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~d~~~~~------ 92 (243)
T 3d2l_A 32 EPGK--RIADIGCGTGTATLLLADH----YEVTGVDLSEEM-------LEIAQEKAMETNRHVDFWVQDMRELE------ 92 (243)
T ss_dssp CTTC--EEEEESCTTCHHHHHHTTT----SEEEEEESCHHH-------HHHHHHHHHHTTCCCEEEECCGGGCC------
T ss_pred CCCC--eEEEecCCCCHHHHHHhhC----CeEEEEECCHHH-------HHHHHHhhhhcCCceEEEEcChhhcC------
Confidence 4444 8999999999999988764 789999986420 0000000000 0011 3456665421
Q ss_pred HHHHhhcCCCcccEEEecC-CCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 391 EFVMKSTKGRGVHFMMADG-GFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg-~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
....+|+|++.. ....-. +... ....+..+.++|+|||.+|+
T Consensus 93 -------~~~~fD~v~~~~~~~~~~~--~~~~------~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 93 -------LPEPVDAITILCDSLNYLQ--TEAD------VKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp -------CSSCEEEEEECTTGGGGCC--SHHH------HHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCcCEEEEeCCchhhcC--CHHH------HHHHHHHHHHhcCCCeEEEE
Confidence 135799999975 332211 1111 11223356688999999997
No 112
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.32 E-value=0.00073 Score=66.52 Aligned_cols=128 Identities=10% Similarity=-0.083 Sum_probs=73.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.+++.+. ..+++|+|+.+.. +....+.+.....+ ...+|+.+.. +
T Consensus 96 ~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~d~~~~~------------~ 154 (254)
T 1xtp_A 96 RALDCGAGIGRITKNLLTKL--YATTDLLEPVKHM-------LEEAKRELAGMPVGKFILASMETAT------------L 154 (254)
T ss_dssp EEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHH-------HHHHHHHTTTSSEEEEEESCGGGCC------------C
T ss_pred EEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHH-------HHHHHHHhccCCceEEEEccHHHCC------------C
Confidence 89999999999999988764 4679999986420 00000000000111 3456665421 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC-------------CChHHHHHHH
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-------------PFSAGLLYLL 464 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~-------------~~s~~ll~~l 464 (621)
....+|+|+|-.....-...+. ...+..+.++|+|||.+++....... ....++..+|
T Consensus 155 ~~~~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 155 PPNTYDLIVIQWTAIYLTDADF---------VKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp CSSCEEEEEEESCGGGSCHHHH---------HHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHH
T ss_pred CCCCeEEEEEcchhhhCCHHHH---------HHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHH
Confidence 2468999999765432211111 11223456789999999998742110 0124566677
Q ss_pred Hhc-cceeEeecC
Q psy13508 465 YRS-YKQVCIFKP 476 (621)
Q Consensus 465 ~~~-F~~V~i~KP 476 (621)
... |+.+.+...
T Consensus 226 ~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 226 NESGVRVVKEAFQ 238 (254)
T ss_dssp HHHTCCEEEEEEC
T ss_pred HHCCCEEEEeeec
Confidence 655 887776544
No 113
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.32 E-value=0.0022 Score=64.36 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=73.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-----C-cccccCCChhhH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-----V-KGNGDVYDPENI 386 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-----v-~~~GDI~~~~~~ 386 (621)
+++. +|||+|||+|.++.+++.+.++.++++|+|+.+.. .....+++...+| + ...||+.+..
T Consensus 98 ~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~-------~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~-- 166 (280)
T 1i9g_A 98 FPGA--RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADH-------AEHARRNVSGCYGQPPDNWRLVVSDLADSE-- 166 (280)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHH-------HHHHHHHHHHHHTSCCTTEEEECSCGGGCC--
T ss_pred CCCC--EEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCCCCcEEEEECchHhcC--
Confidence 5565 89999999999999999877677899999986420 0000000000001 1 3456665421
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHh
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR 466 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~ 466 (621)
.....+|+|++|+... .+ .+..+..+|+|||.+++-..... ....++..|..
T Consensus 167 ----------~~~~~~D~v~~~~~~~-------~~---------~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~ 218 (280)
T 1i9g_A 167 ----------LPDGSVDRAVLDMLAP-------WE---------VLDAVSRLLVAGGVLMVYVATVT--QLSRIVEALRA 218 (280)
T ss_dssp ----------CCTTCEEEEEEESSCG-------GG---------GHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHH
T ss_pred ----------CCCCceeEEEECCcCH-------HH---------HHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHh
Confidence 1245799999986411 11 12345678999999999776531 13345555553
Q ss_pred --ccceeEee
Q psy13508 467 --SYKQVCIF 474 (621)
Q Consensus 467 --~F~~V~i~ 474 (621)
.|..+.++
T Consensus 219 ~~~f~~~~~~ 228 (280)
T 1i9g_A 219 KQCWTEPRAW 228 (280)
T ss_dssp HSSBCCCEEE
T ss_pred cCCcCCcEEE
Confidence 46655444
No 114
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.32 E-value=0.00044 Score=67.46 Aligned_cols=98 Identities=11% Similarity=0.133 Sum_probs=57.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--CC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--GV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++..+..+ ..+++|+|+.+. +.....+.. ... .+ ...+|+.+..
T Consensus 40 ~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~-------~~~~a~~~~-~~~~~~~~~~~~d~~~~~----------- 97 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPK---FKNTWAVDLSQE-------MLSEAENKF-RSQGLKPRLACQDISNLN----------- 97 (246)
T ss_dssp EEEEETCTTSTTHHHHGGG---SSEEEEECSCHH-------HHHHHHHHH-HHTTCCCEEECCCGGGCC-----------
T ss_pred eEEEeCCCCCHHHHHHHHC---CCcEEEEECCHH-------HHHHHHHHH-hhcCCCeEEEecccccCC-----------
Confidence 8999999999999988875 468999998642 000000000 001 12 3456665421
Q ss_pred hcCCCcccEEEecC-CCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 396 STKGRGVHFMMADG-GFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 396 ~~~~~~vDlVlsDg-~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
. ...+|+|++.. ........ .. ....+..+.++|+|||.+++-
T Consensus 98 -~-~~~fD~v~~~~~~l~~~~~~--~~------~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 -I-NRKFDLITCCLDSTNYIIDS--DD------LKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -C-SCCEEEEEECTTGGGGCCSH--HH------HHHHHHHHHTTEEEEEEEEEE
T ss_pred -c-cCCceEEEEcCccccccCCH--HH------HHHHHHHHHHhcCCCcEEEEE
Confidence 1 25799999976 43322111 11 112233567889999999983
No 115
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.30 E-value=0.0002 Score=69.13 Aligned_cols=110 Identities=10% Similarity=0.019 Sum_probs=62.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCC--------cc--ccCCC-cccccCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSET--------FE--PYYGV-KGNGDVY 381 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~--------~~--~~~Gv-~~~GDI~ 381 (621)
+++. +|||+|||+|..+.++..+ ..+++|+|+.+.- ++......... +. ....+ ..+||++
T Consensus 21 ~~~~--~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~---l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 21 VPGA--RVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAA---VERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp CTTC--EEEETTTCCSHHHHHHHHH---CCEEEEEEECHHH---HHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred CCCC--EEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHH---HHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 3454 8999999999999999875 3589999998520 00000000000 00 01123 5688998
Q ss_pred ChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 382 DPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 382 ~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+....+ ...+|+|++=+....-..+. ....+..+.++|||||.+++=++
T Consensus 93 ~l~~~~-----------~~~fD~v~~~~~l~~l~~~~---------~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 93 ALTARD-----------IGHCAAFYDRAAMIALPADM---------RERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp SSTHHH-----------HHSEEEEEEESCGGGSCHHH---------HHHHHHHHHHHSCSEEEEEEEEE
T ss_pred cCCccc-----------CCCEEEEEECcchhhCCHHH---------HHHHHHHHHHHcCCCcEEEEEEE
Confidence 754211 14699999876654321111 11223356789999999444333
No 116
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.29 E-value=0.00095 Score=66.98 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=49.0
Q ss_pred CcccEEEecCCCCC-CCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC------------C-ChHHHHHHHH
Q psy13508 400 RGVHFMMADGGFSV-EGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT------------P-FSAGLLYLLY 465 (621)
Q Consensus 400 ~~vDlVlsDg~~~~-~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~------------~-~s~~ll~~l~ 465 (621)
..+|+|+|=..... ... .++ ....+.-..++|||||.||+-.....+ + ...++...|.
T Consensus 155 ~~fD~V~~~~~l~~i~~~--~~~------~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~ 226 (263)
T 2a14_A 155 PLADCVLTLLAMECACCS--LDA------YRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVL 226 (263)
T ss_dssp CCEEEEEEESCHHHHCSS--HHH------HHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHH
T ss_pred CCCCEeeehHHHHHhcCC--HHH------HHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHH
Confidence 47899998765421 111 111 112333567899999999998632210 1 2346777787
Q ss_pred hc-cceeEeecCCCC----CC-CCceEEEEEeecC
Q psy13508 466 RS-YKQVCIFKPNTS----RP-ANSERYIVCKWKR 494 (621)
Q Consensus 466 ~~-F~~V~i~KP~aS----R~-~ssE~YlVc~g~~ 494 (621)
.. |..+.+..+... .. ...-.|++|+.-+
T Consensus 227 ~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 227 DAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP 261 (263)
T ss_dssp HTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred HCCCEEEEEeecccccccccCCCCceEEEEEEecC
Confidence 66 887777654311 11 1134567887643
No 117
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.29 E-value=0.00046 Score=68.18 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=64.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..+..+. +.++++|+|+.+. +.....+. ...+ ...+|+.+..
T Consensus 36 ~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------- 91 (259)
T 2p35_A 36 NGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDD-------MLEKAADR---LPNTNFGKADLATWK------------- 91 (259)
T ss_dssp SEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHH-------HHHHHHHH---STTSEEEECCTTTCC-------------
T ss_pred EEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHH-------HHHHHHHh---CCCcEEEECChhhcC-------------
Confidence 79999999999999998765 4678999998742 00000000 0112 3467776522
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
....+|+|+|....... ++.. ..+..+.++|+|||.+++-++...
T Consensus 92 ~~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 92 PAQKADLLYANAVFQWV--PDHL---------AVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp CSSCEEEEEEESCGGGS--TTHH---------HHHHHHGGGEEEEEEEEEEEECCT
T ss_pred ccCCcCEEEEeCchhhC--CCHH---------HHHHHHHHhcCCCeEEEEEeCCCC
Confidence 14579999997755432 1111 123346789999999999987654
No 118
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.29 E-value=0.0001 Score=71.60 Aligned_cols=101 Identities=15% Similarity=0.070 Sum_probs=59.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.+++.+....++++|+|+.+.. .....+.+ ...| + ...||..+ .+.. +
T Consensus 67 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~-----~~~~-~ 132 (225)
T 3tr6_A 67 KVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKS-------TALAKEYW-EKAGLSDKIGLRLSPAKD-----TLAE-L 132 (225)
T ss_dssp EEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEESCHHH-----HHHH-H
T ss_pred EEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHH-------HHHHHHHH-HHCCCCCceEEEeCCHHH-----HHHH-h
Confidence 79999999999999999876557899999987420 00000000 0011 1 23455432 1111 1
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
........+|+|++|+.. .+... .+..+..+|+|||.+|+
T Consensus 133 ~~~~~~~~fD~v~~~~~~-----~~~~~---------~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDADK-----ANTDL---------YYEESLKLLREGGLIAV 172 (225)
T ss_dssp HTTTCTTCEEEEEECSCG-----GGHHH---------HHHHHHHHEEEEEEEEE
T ss_pred hhccCCCCccEEEECCCH-----HHHHH---------HHHHHHHhcCCCcEEEE
Confidence 111112689999999842 11111 22345689999999997
No 119
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.28 E-value=0.00089 Score=66.10 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=65.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+.. ++++|+|+.+.. .....+.. ...| + ...||+.+..
T Consensus 45 ~~~~--~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~-------~~~a~~~~-~~~~~~~~~~~~~~d~~~~~--- 109 (257)
T 3f4k_A 45 TDDA--KIADIGCGTGGQTLFLADYVK--GQITGIDLFPDF-------IEIFNENA-VKANCADRVKGITGSMDNLP--- 109 (257)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEECCTTSCS---
T ss_pred CCCC--eEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHH-------HHHHHHHH-HHcCCCCceEEEECChhhCC---
Confidence 4555 899999999999999988642 499999997420 00000000 0111 2 3567776532
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+....+|+|+|.+.....+ ... .+..+.++|+|||.+++-..
T Consensus 110 ---------~~~~~fD~v~~~~~l~~~~---~~~---------~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 110 ---------FQNEELDLIWSEGAIYNIG---FER---------GMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp ---------SCTTCEEEEEEESCSCCCC---HHH---------HHHHHHTTEEEEEEEEEEEE
T ss_pred ---------CCCCCEEEEEecChHhhcC---HHH---------HHHHHHHHcCCCcEEEEEEe
Confidence 1346899999998765541 211 23356789999999999874
No 120
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.27 E-value=0.00062 Score=66.57 Aligned_cols=144 Identities=13% Similarity=0.027 Sum_probs=86.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.++.. ...+++|+|+.+.. +....+... ..| + ...||+.+..
T Consensus 69 ~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~~~--------- 128 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMAS---PERFVVGLDISESA-------LAKANETYG-SSPKAEYFSFVKEDVFTWR--------- 128 (235)
T ss_dssp EEEEETCTTCHHHHHHCB---TTEEEEEECSCHHH-------HHHHHHHHT-TSGGGGGEEEECCCTTTCC---------
T ss_pred CEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHH-------HHHHHHHhh-ccCCCcceEEEECchhcCC---------
Confidence 799999999999998864 35789999987420 000000000 001 2 4577887632
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC--------CChHHHHHHHH
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT--------PFSAGLLYLLY 465 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~--------~~s~~ll~~l~ 465 (621)
....+|+|++-+....-...+.. ..+..+..+|+|||.+++-.|.... ....++..+|.
T Consensus 129 ----~~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 129 ----PTELFDLIFDYVFFCAIEPEMRP---------AWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp ----CSSCEEEEEEESSTTTSCGGGHH---------HHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred ----CCCCeeEEEEChhhhcCCHHHHH---------HHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 23489999997766543322222 1123456789999999997775311 12356667777
Q ss_pred hc-cceeEeecCC--CCCCCCceEEEEEeecCC
Q psy13508 466 RS-YKQVCIFKPN--TSRPANSERYIVCKWKRP 495 (621)
Q Consensus 466 ~~-F~~V~i~KP~--aSR~~ssE~YlVc~g~~~ 495 (621)
.. |+.+.+..-. .......|.+..++..+.
T Consensus 196 ~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~~ 228 (235)
T 3lcc_A 196 PIGFKAVSVEENPHAIPTRKGKEKLGRWKKINL 228 (235)
T ss_dssp GGTEEEEEEEECTTCCTTTTTSCEEEEEEESCC
T ss_pred HcCCeEEEEEecCCccccccCHHHHhhhhhccc
Confidence 76 8776654322 222345688888877653
No 121
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.26 E-value=0.00053 Score=73.32 Aligned_cols=139 Identities=17% Similarity=0.210 Sum_probs=74.8
Q ss_pred CCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHH
Q psy13508 314 PGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILS 388 (621)
Q Consensus 314 ~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~ 388 (621)
+++ +|||+|||+|+|+..+..+ ...+++|+|+.+.. +....+++. ..| + ...||+.+.
T Consensus 217 ~~~--~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~-------l~~a~~n~~-~n~~~~~v~~~~~d~~~~----- 279 (396)
T 2as0_A 217 PGD--RVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRA-------IETAKENAK-LNGVEDRMKFIVGSAFEE----- 279 (396)
T ss_dssp TTC--EEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHH-------HHHHHHHHH-HTTCGGGEEEEESCHHHH-----
T ss_pred CCC--eEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHH-------HHHHHHHHH-HcCCCccceEEECCHHHH-----
Confidence 455 8999999999999999874 34689999987520 000000000 011 1 345555431
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
+.... + .+..+|+|++|...-........+. .......+..+..+|+|||.+++-.+.... ....+...+...|
T Consensus 280 ~~~~~-~--~~~~fD~Vi~dpP~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~-~~~~~~~~v~~~~ 353 (396)
T 2as0_A 280 MEKLQ-K--KGEKFDIVVLDPPAFVQHEKDLKAG--LRAYFNVNFAGLNLVKDGGILVTCSCSQHV-DLQMFKDMIIAAG 353 (396)
T ss_dssp HHHHH-H--TTCCEEEEEECCCCSCSSGGGHHHH--HHHHHHHHHHHHTTEEEEEEEEEEECCTTS-CHHHHHHHHHHHH
T ss_pred HHHHH-h--hCCCCCEEEECCCCCCCCHHHHHHH--HHHHHHHHHHHHHhcCCCcEEEEEECCCCC-CHHHHHHHHHHHH
Confidence 11111 1 2468999999953222111122111 112222334688999999999998887532 1223444343322
Q ss_pred ----ceeEeec
Q psy13508 469 ----KQVCIFK 475 (621)
Q Consensus 469 ----~~V~i~K 475 (621)
..+.++.
T Consensus 354 ~~~~~~~~~i~ 364 (396)
T 2as0_A 354 AKAGKFLKMLE 364 (396)
T ss_dssp HHTTEEEEESS
T ss_pred HHcCCeEEEEe
Confidence 2455555
No 122
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.26 E-value=8.6e-05 Score=75.40 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=63.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--CC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--GV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.|+..+..+....++++|+|+.+.. .....+.+. .. .+ ...+|+.+..
T Consensus 25 ~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~-------~~~a~~~~~-~~~~~v~~~~~d~~~~~----------- 85 (284)
T 3gu3_A 25 HIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETL-------LAEARELFR-LLPYDSEFLEGDATEIE----------- 85 (284)
T ss_dssp EEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHH-------HHHHHHHHH-SSSSEEEEEESCTTTCC-----------
T ss_pred eEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-hcCCceEEEEcchhhcC-----------
Confidence 89999999999999998765435899999997421 000000000 01 12 4567887532
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+ ...+|+|++.+...... +.+ ..+..+.++|+|||.+++-...
T Consensus 86 -~-~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -L-NDKYDIAICHAFLLHMT--TPE---------TMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -C-SSCEEEEEEESCGGGCS--SHH---------HHHHHHHHTEEEEEEEEEEECC
T ss_pred -c-CCCeeEEEECChhhcCC--CHH---------HHHHHHHHHcCCCCEEEEEecc
Confidence 1 35899999998654332 221 2233466899999999976544
No 123
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.23 E-value=0.00096 Score=63.96 Aligned_cols=98 Identities=9% Similarity=0.007 Sum_probs=62.4
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++..+..+ .++++|+|+.+.. .....+.+. ....+ ...||+.+..
T Consensus 76 ~~~~--~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~-------~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 138 (210)
T 3lbf_A 76 TPQS--RVLEIGTGSGYQTAILAHL---VQHVCSVERIKGL-------QWQARRRLKNLDLHNVSTRHGDGWQGW----- 138 (210)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHH---SSEEEEEESCHHH-------HHHHHHHHHHTTCCSEEEEESCGGGCC-----
T ss_pred CCCC--EEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHH-------HHHHHHHHHHcCCCceEEEECCcccCC-----
Confidence 4555 8999999999999998876 5799999987420 000000000 00012 3456665421
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++++.+..... .+...|+|||.+|+=+-.
T Consensus 139 -------~~~~~~D~i~~~~~~~~~~~-----------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 -------QARAPFDAIIVTAAPPEIPT-----------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -------GGGCCEEEEEESSBCSSCCT-----------------HHHHTEEEEEEEEEEECS
T ss_pred -------ccCCCccEEEEccchhhhhH-----------------HHHHhcccCcEEEEEEcC
Confidence 11357999999987644321 146789999999997765
No 124
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.23 E-value=0.00025 Score=69.42 Aligned_cols=105 Identities=11% Similarity=0.003 Sum_probs=66.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+ .++++|+|+.+.. .....+.. ...++ ...+|+.+..
T Consensus 52 ~~~~--~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~-------~~~a~~~~-~~~~~~~~~~d~~~~~------- 111 (242)
T 3l8d_A 52 KKEA--EVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVM-------IQKGKERG-EGPDLSFIKGDLSSLP------- 111 (242)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHT---TCEEEEEESCHHH-------HHHHHTTT-CBTTEEEEECBTTBCS-------
T ss_pred CCCC--eEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHH-------HHHHHhhc-ccCCceEEEcchhcCC-------
Confidence 4455 8999999999999999875 4689999987420 00000000 01122 4567877532
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
+....+|+|++-....... +.. ..+..+.++|+|||.+++=.+...
T Consensus 112 -----~~~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 112 -----FENEQFEAIMAINSLEWTE--EPL---------RALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp -----SCTTCEEEEEEESCTTSSS--CHH---------HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -----CCCCCccEEEEcChHhhcc--CHH---------HHHHHHHHHhCCCeEEEEEEcCCc
Confidence 1356899999987665432 221 123346688999999999887643
No 125
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.22 E-value=0.00052 Score=69.06 Aligned_cols=129 Identities=14% Similarity=0.082 Sum_probs=74.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCC-C----------CCc----cccCCC-cccccCCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGP-S----------ETF----EPYYGV-KGNGDVYD 382 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~-~----------~~~----~~~~Gv-~~~GDI~~ 382 (621)
+|||+|||.|..+.++..+ ..+|+|+|+.+.- ++...... . ..+ .....+ ..+||+++
T Consensus 71 ~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~---i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 71 RVFFPLCGKAIEMKWFADR---GHTVVGVEISEIG---IREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp EEEETTCTTCTHHHHHHHT---TCEEEEECSCHHH---HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred eEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHH---HHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 8999999999999999874 3589999998521 00000000 0 000 000112 46789987
Q ss_pred hhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc-------C--C
Q psy13508 383 PENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD-------M--F 453 (621)
Q Consensus 383 ~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~-------~--~ 453 (621)
... .....+|+|++=+....-..+.. ...+..+.++|||||.|++-.+. + +
T Consensus 145 l~~-----------~~~~~FD~V~~~~~l~~l~~~~~---------~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~ 204 (252)
T 2gb4_A 145 LPR-----------ANIGKFDRIWDRGALVAINPGDH---------DRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPF 204 (252)
T ss_dssp GGG-----------GCCCCEEEEEESSSTTTSCGGGH---------HHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSC
T ss_pred CCc-----------ccCCCEEEEEEhhhhhhCCHHHH---------HHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCC
Confidence 431 01268999998776644321111 11223467899999999654432 1 1
Q ss_pred CCChHHHHHHHHhccceeEe
Q psy13508 454 TPFSAGLLYLLYRSYKQVCI 473 (621)
Q Consensus 454 ~~~s~~ll~~l~~~F~~V~i 473 (621)
.....++..++...|+-+.+
T Consensus 205 ~~~~~el~~~l~~~f~v~~~ 224 (252)
T 2gb4_A 205 YVPSAELKRLFGTKCSMQCL 224 (252)
T ss_dssp CCCHHHHHHHHTTTEEEEEE
T ss_pred CCCHHHHHHHhhCCeEEEEE
Confidence 11245677778766765544
No 126
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.22 E-value=0.003 Score=62.93 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=66.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+. .++++|+|+.+.. .....+.. ...| + ...||+.+..
T Consensus 60 ~~~~--~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~~~~~~~d~~~~~--- 124 (273)
T 3bus_A 60 RSGD--RVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQ-------VNQANARA-TAAGLANRVTFSYADAMDLP--- 124 (273)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEECCTTSCC---
T ss_pred CCCC--EEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHH-------HHHHHHHH-HhcCCCcceEEEECccccCC---
Confidence 4455 89999999999999998764 5799999987420 00000000 0001 2 3467776522
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|+|-+......+. . ..+..+.++|+|||.+++-.+..
T Consensus 125 ---------~~~~~fD~v~~~~~l~~~~~~--~---------~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 125 ---------FEDASFDAVWALESLHHMPDR--G---------RALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp ---------SCTTCEEEEEEESCTTTSSCH--H---------HHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ---------CCCCCccEEEEechhhhCCCH--H---------HHHHHHHHHcCCCeEEEEEEeec
Confidence 134689999998766544322 1 12334678999999999988764
No 127
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.22 E-value=0.0036 Score=58.84 Aligned_cols=124 Identities=11% Similarity=-0.019 Sum_probs=71.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
++||+|||+|.++.++..+ ..+++|+|+.+.. .....+.+. ....+ ...+|+.+..
T Consensus 35 ~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~~d~~~~~----------- 93 (199)
T 2xvm_A 35 KTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMS-------IANVERIKSIENLDNLHTRVVDLNNLT----------- 93 (199)
T ss_dssp EEEEETCTTSHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHHHHHHTCTTEEEEECCGGGCC-----------
T ss_pred eEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHH-------HHHHHHHHHhCCCCCcEEEEcchhhCC-----------
Confidence 8999999999999999875 4689999986420 000000000 00012 3456665421
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC-----------CCChHHHHHHH
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF-----------TPFSAGLLYLL 464 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~-----------~~~s~~ll~~l 464 (621)
. ...+|+|++.+.......++.. ..+..+.++|+|||.+++-.+... .....++..++
T Consensus 94 -~-~~~~D~v~~~~~l~~~~~~~~~---------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (199)
T 2xvm_A 94 -F-DRQYDFILSTVVLMFLEAKTIP---------GLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY 162 (199)
T ss_dssp -C-CCCEEEEEEESCGGGSCGGGHH---------HHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHT
T ss_pred -C-CCCceEEEEcchhhhCCHHHHH---------HHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHh
Confidence 1 4579999998765433222221 122345689999999877553211 11234566667
Q ss_pred HhccceeEeec
Q psy13508 465 YRSYKQVCIFK 475 (621)
Q Consensus 465 ~~~F~~V~i~K 475 (621)
.. |+-+....
T Consensus 163 ~~-f~~~~~~~ 172 (199)
T 2xvm_A 163 EG-WERVKYNE 172 (199)
T ss_dssp TT-SEEEEEEC
T ss_pred cC-CeEEEecc
Confidence 66 77666543
No 128
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.22 E-value=0.00023 Score=66.39 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=58.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.+++.+ ...+++|+|+.+. ++....+++ ...| + ...||+.+ .+..
T Consensus 34 ~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~-------~~~~a~~~~-~~~~~~~~~~~~~~d~~~-----~~~~-- 96 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRK-------AQAIIQDNI-IMTKAENRFTLLKMEAER-----AIDC-- 96 (177)
T ss_dssp EEEEETCTTCHHHHHHHHT--TCCEEEEECCCHH-------HHHHHHHHH-HTTTCGGGEEEECSCHHH-----HHHH--
T ss_pred eEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHH-------HHHHHHHHH-HHcCCCCceEEEECcHHH-----hHHh--
Confidence 8999999999999998875 3579999998642 000000000 0111 1 23455542 1111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
....+|+|++|..... ....+ .+..+. +.++|+|||.+++-....
T Consensus 97 ----~~~~fD~i~~~~~~~~---~~~~~------~~~~l~-~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 97 ----LTGRFDLVFLDPPYAK---ETIVA------TIEALA-AKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ----BCSCEEEEEECCSSHH---HHHHH------HHHHHH-HTTCEEEEEEEEEEEETT
T ss_pred ----hcCCCCEEEECCCCCc---chHHH------HHHHHH-hCCCcCCCcEEEEEECCc
Confidence 1356999999964311 11111 111111 268999999999977654
No 129
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.22 E-value=0.0015 Score=65.87 Aligned_cols=122 Identities=11% Similarity=0.081 Sum_probs=72.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++..++++.++.++++|+|+.+.. .....+++. ..| + ...+|+.+.
T Consensus 111 ~~~~--~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~~---- 176 (277)
T 1o54_A 111 KEGD--RIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEF-------AKLAESNLT-KWGLIERVTIKVRDISEG---- 176 (277)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHH-------HHHHHHHHH-HTTCGGGEEEECCCGGGC----
T ss_pred CCCC--EEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHH-------HHHHHHHHH-HcCCCCCEEEEECCHHHc----
Confidence 4565 89999999999999999876677899999986420 000000000 011 1 245666532
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
+....+|+|++|.... .+ .+..+..+|+|||.+++-..... ....++..|...
T Consensus 177 ---------~~~~~~D~V~~~~~~~-------~~---------~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~ 229 (277)
T 1o54_A 177 ---------FDEKDVDALFLDVPDP-------WN---------YIDKCWEALKGGGRFATVCPTTN--QVQETLKKLQEL 229 (277)
T ss_dssp ---------CSCCSEEEEEECCSCG-------GG---------THHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHS
T ss_pred ---------ccCCccCEEEECCcCH-------HH---------HHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHC
Confidence 1235799999986311 11 12235678999999999775421 123455555533
Q ss_pred -cceeEeec
Q psy13508 468 -YKQVCIFK 475 (621)
Q Consensus 468 -F~~V~i~K 475 (621)
|..+.+++
T Consensus 230 gf~~~~~~~ 238 (277)
T 1o54_A 230 PFIRIEVWE 238 (277)
T ss_dssp SEEEEEEEC
T ss_pred CCceeEEEE
Confidence 66665543
No 130
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.22 E-value=0.0037 Score=59.54 Aligned_cols=133 Identities=13% Similarity=0.009 Sum_probs=74.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
++||+|||+|.++..+..+. +.++++|+|+.+.. .....+.+ ...| + ...+|+.+..
T Consensus 68 ~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~-------~~~a~~~~-~~~~~~~v~~~~~d~~~~~---------- 128 (207)
T 1jsx_A 68 RFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKR-------VRFLRQVQ-HELKLENIEPVQSRVEEFP---------- 128 (207)
T ss_dssp EEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHH-------HHHHHHHH-HHTTCSSEEEEECCTTTSC----------
T ss_pred eEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHH-------HHHHHHHH-HHcCCCCeEEEecchhhCC----------
Confidence 89999999999999988754 46899999987420 00000000 0011 2 3567776521
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEee
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 474 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~ 474 (621)
....+|+|++.+-. +.. .-+..+..+|+|||.+++-.-.. ....+..++. -|+.+.+.
T Consensus 129 ---~~~~~D~i~~~~~~------~~~---------~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~-g~~~~~~~ 186 (207)
T 1jsx_A 129 ---SEPPFDGVISRAFA------SLN---------DMVSWCHHLPGEQGRFYALKGQM---PEDEIALLPE-EYQVESVV 186 (207)
T ss_dssp ---CCSCEEEEECSCSS------SHH---------HHHHHHTTSEEEEEEEEEEESSC---CHHHHHTSCT-TEEEEEEE
T ss_pred ---ccCCcCEEEEeccC------CHH---------HHHHHHHHhcCCCcEEEEEeCCC---chHHHHHHhc-CCceeeee
Confidence 13579999996521 111 12235678999999998854321 2333433333 56665533
Q ss_pred cCCCCCCCCceEEEEEee
Q psy13508 475 KPNTSRPANSERYIVCKW 492 (621)
Q Consensus 475 KP~aSR~~ssE~YlVc~g 492 (621)
.-..........+++++.
T Consensus 187 ~~~~~~~~~~~~~~~~~k 204 (207)
T 1jsx_A 187 KLQVPALDGERHLVVIKA 204 (207)
T ss_dssp EEECC--CCEEEEEEEEE
T ss_pred eeccCCCCCceEEEEEEe
Confidence 222223344455566554
No 131
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.21 E-value=0.00024 Score=68.75 Aligned_cols=109 Identities=9% Similarity=0.014 Sum_probs=61.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++.++..+ .+..+++|+|+.+.. ......+....... .....+ ...||+.....
T Consensus 32 ~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~~~~~~----------- 98 (217)
T 3jwh_A 32 RVIDLGCGQGNLLKILLKD-SFFEQITGVDVSYRSLEIAQERLDRLRLPR-NQWERLQLIQGALTYQDK----------- 98 (217)
T ss_dssp EEEEETCTTCHHHHHHHHC-TTCSEEEEEESCHHHHHHHHHHHTTCCCCH-HHHTTEEEEECCTTSCCG-----------
T ss_pred EEEEeCCCCCHHHHHHHhh-CCCCEEEEEECCHHHHHHHHHHHHHhcCCc-ccCcceEEEeCCcccccc-----------
Confidence 8999999999999998874 445799999997521 00000000000000 000012 35677754321
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
....+|+|+|......-..+... ..+..+.++|+|||.+|+-..
T Consensus 99 -~~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 -RFHGYDAATVIEVIEHLDLSRLG---------AFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp -GGCSCSEEEEESCGGGCCHHHHH---------HHHHHHHTTTCCSEEEEEEEB
T ss_pred -cCCCcCEEeeHHHHHcCCHHHHH---------HHHHHHHHHcCCCEEEEEccC
Confidence 23579999998765433222211 123345689999998776554
No 132
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.20 E-value=0.001 Score=68.44 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=82.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----c--CCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----Y--YGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~--~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||+|+++..++++. +..++.++|+.+. .+....+.+.. . ..+ ...||..+
T Consensus 93 ~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~-------~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~--------- 155 (296)
T 1inl_A 93 KVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGL-------VIEAARKYLKQTSCGFDDPRAEIVIANGAE--------- 155 (296)
T ss_dssp EEEEEECTTCHHHHHHTTST-TCSEEEEEESCHH-------HHHHHHHHCHHHHGGGGCTTEEEEESCHHH---------
T ss_pred EEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHH-------HHHHHHHHhHhhccccCCCceEEEECcHHH---------
Confidence 89999999999999998753 4579999998642 00000001100 0 011 23445432
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHhcc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRSY 468 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~~F 468 (621)
++.. ....+|+|++|......|.. ..|. ..-+..+.+.|+|||.||+-.-.... .....++..|+..|
T Consensus 156 ~l~~--~~~~fD~Ii~d~~~~~~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 226 (296)
T 1inl_A 156 YVRK--FKNEFDVIIIDSTDPTAGQG-------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVF 226 (296)
T ss_dssp HGGG--CSSCEEEEEEEC-----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHC
T ss_pred HHhh--CCCCceEEEEcCCCcccCch-------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHC
Confidence 1111 24679999999643211110 0011 11122456899999999997543211 12345567788889
Q ss_pred ceeEeec-CCCCCCCCceEEEEEeec
Q psy13508 469 KQVCIFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 469 ~~V~i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
..|.++. +..+-|...-.+++|..-
T Consensus 227 ~~v~~~~~~vp~~p~g~~~f~~as~~ 252 (296)
T 1inl_A 227 PITRVYLGFMTTYPSGMWSYTFASKG 252 (296)
T ss_dssp SEEEEEEEECTTSTTSEEEEEEEESS
T ss_pred CceEEEEeecCccCCCceEEEEecCC
Confidence 9988775 233334556678888754
No 133
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.19 E-value=0.00019 Score=68.48 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=65.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++..+..+ +. .+++|+|+.+.. +....+.......+ ...+|+.+..
T Consensus 41 ~~~~--~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~-------~~~a~~~~~~~~~i~~~~~d~~~~~------- 102 (215)
T 2pxx_A 41 RPED--RILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVV-------VAAMQACYAHVPQLRWETMDVRKLD------- 102 (215)
T ss_dssp CTTC--CEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHH-------HHHHHHHTTTCTTCEEEECCTTSCC-------
T ss_pred CCCC--eEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHH-------HHHHHHhcccCCCcEEEEcchhcCC-------
Confidence 3444 7999999999999988875 32 389999987420 00000000000112 3467776531
Q ss_pred HHHhhcCCCcccEEEecCCCCCC----Cch-hh-HHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVE----GQE-NI-QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~----G~~-~~-de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|++.+....- +.+ .. .+. ..-....+..+.++|+|||.+|+-.+..
T Consensus 103 -----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 -----FPSASFDVVLEKGTLDALLAGERDPWTVSSEG--VHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp -----SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHH--HHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -----CCCCcccEEEECcchhhhccccccccccccch--hHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 134679999998754211 000 00 000 0111222335678899999999998864
No 134
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.19 E-value=0.00092 Score=65.74 Aligned_cols=97 Identities=11% Similarity=0.048 Sum_probs=59.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-----C-cccccCCChhhHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-----V-KGNGDVYDPENILSLHEF 392 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-----v-~~~GDI~~~~~~~~l~~~ 392 (621)
++||+|||+|.++.+++.+..+.++++|+|+.+.. .....+++. ..| + ...||..+ .
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-------~~~a~~~~~-~~g~~~~~i~~~~gda~~---------~ 121 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEH-------QRQAKALFR-EAGYSPSRVRFLLSRPLD---------V 121 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHH-------HHHHHHHHH-HTTCCGGGEEEECSCHHH---------H
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCcCcEEEEEcCHHH---------H
Confidence 79999999999999999877667999999987521 000000000 111 1 23444332 1
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
+ .......+|+|++|+.. .+..+ .+..+..+|||||.+|+
T Consensus 122 l-~~~~~~~fD~V~~d~~~-----~~~~~---------~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 122 M-SRLANDSYQLVFGQVSP-----MDLKA---------LVDAAWPLLRRGGALVL 161 (221)
T ss_dssp G-GGSCTTCEEEEEECCCT-----TTHHH---------HHHHHHHHEEEEEEEEE
T ss_pred H-HHhcCCCcCeEEEcCcH-----HHHHH---------HHHHHHHHcCCCcEEEE
Confidence 1 11124689999999743 11211 23345689999999997
No 135
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.17 E-value=0.0039 Score=61.44 Aligned_cols=32 Identities=19% Similarity=-0.128 Sum_probs=27.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++..+..+ .+.++++|+|+.+
T Consensus 73 ~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~ 104 (240)
T 1xdz_A 73 TICDVGAGAGFPSLPIKIC-FPHLHVTIVDSLN 104 (240)
T ss_dssp EEEEECSSSCTTHHHHHHH-CTTCEEEEEESCH
T ss_pred EEEEecCCCCHHHHHHHHh-CCCCEEEEEeCCH
Confidence 8999999999999988764 3568999999874
No 136
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.17 E-value=0.00044 Score=68.77 Aligned_cols=105 Identities=15% Similarity=0.057 Sum_probs=63.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++..+..+. ++++|+|+.+. +.....+... ....+ ...||+.+..
T Consensus 36 ~~~~--~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~-------~l~~a~~~~~~~~~~~v~~~~~d~~~l~----- 98 (260)
T 1vl5_A 36 KGNE--EVLDVATGGGHVANAFAPFV---KKVVAFDLTED-------ILKVARAFIEGNGHQQVEYVQGDAEQMP----- 98 (260)
T ss_dssp CSCC--EEEEETCTTCHHHHHHGGGS---SEEEEEESCHH-------HHHHHHHHHHHTTCCSEEEEECCC-CCC-----
T ss_pred CCCC--EEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHH-------HHHHHHHHHHhcCCCceEEEEecHHhCC-----
Confidence 3444 89999999999999888753 49999998742 0000000000 00012 3567776532
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|+|-.....-. +.. ..+..+.++|+|||.|++-.+..
T Consensus 99 -------~~~~~fD~V~~~~~l~~~~--d~~---------~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 99 -------FTDERFHIVTCRIAAHHFP--NPA---------SFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp -------SCTTCEEEEEEESCGGGCS--CHH---------HHHHHHHHHEEEEEEEEEEEEEB
T ss_pred -------CCCCCEEEEEEhhhhHhcC--CHH---------HHHHHHHHHcCCCCEEEEEEcCC
Confidence 1346899999987654322 111 12334678899999999976554
No 137
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.16 E-value=0.0014 Score=65.92 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=65.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|+++.++..+ ..++++|+|+.+.. +....+.. ...| + ...+|+.+...
T Consensus 63 ~~~~--~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~-- 128 (298)
T 1ri5_A 63 KRGD--SVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVS-------INDARVRA-RNMKRRFKVFFRAQDSYGRHM-- 128 (298)
T ss_dssp CTTC--EEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHH-------HHHHHHHH-HTSCCSSEEEEEESCTTTSCC--
T ss_pred CCCC--eEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHH-------HHHHHHHH-HhcCCCccEEEEECCcccccc--
Confidence 4455 8999999999999997764 34699999987421 00000000 0001 1 35678776310
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCC--CCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSV--EGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~--~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++.+.... ...++. ...+..+.++|+|||.+++-+..
T Consensus 129 ---------~~~~~fD~v~~~~~l~~~~~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 129 ---------DLGKEFDVISSQFSFHYAFSTSESL---------DIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ---------CCSSCEEEEEEESCGGGGGSSHHHH---------HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ---------CCCCCcCEEEECchhhhhcCCHHHH---------HHHHHHHHHhcCCCCEEEEEECC
Confidence 02467999999986533 111111 12233567889999999998865
No 138
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.16 E-value=0.00025 Score=68.51 Aligned_cols=110 Identities=12% Similarity=0.004 Sum_probs=61.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++.++..+ .+..+++|+|+.+.. +.....+....... .....+ ...||+.....
T Consensus 32 ~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~~~~~~----------- 98 (219)
T 3jwg_A 32 KVIDLGCGEGNLLSLLLKD-KSFEQITGVDVSYSVLERAKDRLKIDRLPE-MQRKRISLFQSSLVYRDK----------- 98 (219)
T ss_dssp EEEEETCTTCHHHHHHHTS-TTCCEEEEEESCHHHHHHHHHHHTGGGSCH-HHHTTEEEEECCSSSCCG-----------
T ss_pred EEEEecCCCCHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHhhcccc-ccCcceEEEeCccccccc-----------
Confidence 8999999999999998864 345799999997420 00000000000000 000022 35677754221
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|+|-.....-..+.. ...+..+.++|+|||.+|.-.+.
T Consensus 99 -~~~~fD~V~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 99 -RFSGYDAATVIEVIEHLDENRL---------QAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp -GGTTCSEEEEESCGGGCCHHHH---------HHHHHHHHTTTCCSEEEEEEEBG
T ss_pred -ccCCCCEEEEHHHHHhCCHHHH---------HHHHHHHHHhhCCCEEEEEccch
Confidence 2357999998775543321111 11233466899999977765543
No 139
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.16 E-value=0.00036 Score=69.85 Aligned_cols=102 Identities=12% Similarity=0.050 Sum_probs=59.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GDI~~~~~~~~l~~~v 393 (621)
++||+|||+|.++.+++......++++|+|+.+.. .....+.+ ...|. ...||..+ .+....
T Consensus 82 ~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~-------~~~a~~~~-~~~g~~~~i~~~~gda~~-----~l~~l~ 148 (247)
T 1sui_A 82 NTMEIGVYTGYSLLATALAIPEDGKILAMDINKEN-------YELGLPVI-KKAGVDHKIDFREGPALP-----VLDEMI 148 (247)
T ss_dssp EEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHH-------HHHHHHHH-HHTTCGGGEEEEESCHHH-----HHHHHH
T ss_pred EEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHH-HHcCCCCCeEEEECCHHH-----HHHHHH
Confidence 79999999999999998876557899999987521 00000000 01121 23455432 111111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
........+|+|++|+.. .+.. ..+..+..+|+|||.+|+
T Consensus 149 ~~~~~~~~fD~V~~d~~~-----~~~~---------~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 149 KDEKNHGSYDFIFVDADK-----DNYL---------NYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp HSGGGTTCBSEEEECSCS-----TTHH---------HHHHHHHHHBCTTCCEEE
T ss_pred hccCCCCCEEEEEEcCch-----HHHH---------HHHHHHHHhCCCCeEEEE
Confidence 110013579999999752 1121 112245689999999986
No 140
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.13 E-value=0.0016 Score=67.28 Aligned_cols=99 Identities=10% Similarity=0.016 Sum_probs=62.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
++++ +|||+|||+|+++.++..+....++++|+|+.+.. .....+.+. ....+ ...||+.+..
T Consensus 74 ~~~~--~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~-------~~~a~~~~~~~g~~~v~~~~~d~~~~~----- 139 (317)
T 1dl5_A 74 DKGM--RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKI-------CEIAKRNVERLGIENVIFVCGDGYYGV----- 139 (317)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHH-------HHHHHHHHHHTTCCSEEEEESCGGGCC-----
T ss_pred CCcC--EEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHH-------HHHHHHHHHHcCCCCeEEEECChhhcc-----
Confidence 5566 89999999999999998765435789999987421 000000000 00012 3456665411
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
.....+|+|++++.....+ ..+...|+|||.+++-+
T Consensus 140 -------~~~~~fD~Iv~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 140 -------PEFSPYDVIFVTVGVDEVP-----------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp -------GGGCCEEEEEECSBBSCCC-----------------HHHHHHEEEEEEEEEEB
T ss_pred -------ccCCCeEEEEEcCCHHHHH-----------------HHHHHhcCCCcEEEEEE
Confidence 0134799999998765432 12356899999999875
No 141
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.12 E-value=0.00034 Score=73.37 Aligned_cols=129 Identities=9% Similarity=-0.039 Sum_probs=67.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-----C-cccccCCChhhHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-----V-KGNGDVYDPENILSLHEF 392 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-----v-~~~GDI~~~~~~~~l~~~ 392 (621)
+|||||||+|+|+.+++.+ .++++|+|+.+.. +....+++. ..| + ...||+.+. +...
T Consensus 156 ~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~a-------l~~a~~n~~-~~gl~~~~v~~i~~D~~~~-----l~~~ 219 (332)
T 2igt_A 156 KVLNLFGYTGVASLVAAAA---GAEVTHVDASKKA-------IGWAKENQV-LAGLEQAPIRWICEDAMKF-----IQRE 219 (332)
T ss_dssp EEEEETCTTCHHHHHHHHT---TCEEEEECSCHHH-------HHHHHHHHH-HHTCTTSCEEEECSCHHHH-----HHHH
T ss_pred cEEEcccccCHHHHHHHHc---CCEEEEEECCHHH-------HHHHHHHHH-HcCCCccceEEEECcHHHH-----HHHH
Confidence 8999999999999999874 3499999987420 000000000 001 1 345665531 1111
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchh-hHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQEN-IQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~-~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
.. .+..+|+|++|-..-..+... ..+. ......-+..+..+|+|||.|++-...........+...+...+
T Consensus 220 ~~---~~~~fD~Ii~dPP~~~~~~~~~~~~~--~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~ 291 (332)
T 2igt_A 220 ER---RGSTYDIILTDPPKFGRGTHGEVWQL--FDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETM 291 (332)
T ss_dssp HH---HTCCBSEEEECCCSEEECTTCCEEEH--HHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHT
T ss_pred Hh---cCCCceEEEECCccccCCchHHHHHH--HHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 10 145899999995311111000 0000 01112223356799999999776655443323445566666443
No 142
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.12 E-value=0.0022 Score=64.16 Aligned_cols=104 Identities=10% Similarity=0.055 Sum_probs=63.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.|+.++..+ .+.++++|+|+.+.. .....+.+. ....+ ...+|+.+..
T Consensus 36 ~~~~--~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~~d~~~~~----- 100 (276)
T 3mgg_A 36 PPGA--KVLEAGCGIGAQTVILAKN-NPDAEITSIDISPES-------LEKARENTEKNGIKNVKFLQANIFSLP----- 100 (276)
T ss_dssp CTTC--EEEETTCTTSHHHHHHHHH-CTTSEEEEEESCHHH-------HHHHHHHHHHTTCCSEEEEECCGGGCC-----
T ss_pred CCCC--eEEEecCCCCHHHHHHHHh-CCCCEEEEEECCHHH-------HHHHHHHHHHcCCCCcEEEEcccccCC-----
Confidence 5555 8999999999999999876 456899999986420 000000000 00012 3456666422
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+....+|+|++......-.+ .+ ..+..+.++|+|||.+++-.
T Consensus 101 -------~~~~~fD~v~~~~~l~~~~~--~~---------~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 -------FEDSSFDHIFVCFVLEHLQS--PE---------EALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp -------SCTTCEEEEEEESCGGGCSC--HH---------HHHHHHHHHEEEEEEEEEEE
T ss_pred -------CCCCCeeEEEEechhhhcCC--HH---------HHHHHHHHHcCCCcEEEEEE
Confidence 13468999999876543322 11 11234567899999999865
No 143
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.11 E-value=0.00049 Score=69.91 Aligned_cols=118 Identities=19% Similarity=0.095 Sum_probs=63.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~ 392 (621)
+++. +|||||||+|.++..+..+ .++++|+|+.+. ++....+..... ..++|+.+....
T Consensus 44 ~~g~--~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~-------ml~~Ar~~~~~~---~v~~~~~~~~~~------ 102 (261)
T 3iv6_A 44 VPGS--TVAVIGASTRFLIEKALER---GASVTVFDFSQR-------MCDDLAEALADR---CVTIDLLDITAE------ 102 (261)
T ss_dssp CTTC--EEEEECTTCHHHHHHHHHT---TCEEEEEESCHH-------HHHHHHHHTSSS---CCEEEECCTTSC------
T ss_pred CCcC--EEEEEeCcchHHHHHHHhc---CCEEEEEECCHH-------HHHHHHHHHHhc---cceeeeeecccc------
Confidence 4565 8999999999999999875 468999998742 110000000000 123444332110
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHH
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLY 462 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~ 462 (621)
.... ....+|+|+|+.....-..+... .. +.....+| |||.+++=+..++-..+..++.
T Consensus 103 ~~~~-~~~~fD~Vv~~~~l~~~~~~~~~------~~---l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~ 161 (261)
T 3iv6_A 103 IPKE-LAGHFDFVLNDRLINRFTTEEAR------RA---CLGMLSLV-GSGTVRASVKLGFYDIDLKLIE 161 (261)
T ss_dssp CCGG-GTTCCSEEEEESCGGGSCHHHHH------HH---HHHHHHHH-TTSEEEEEEEBSCCHHHHHHHH
T ss_pred cccc-cCCCccEEEEhhhhHhCCHHHHH------HH---HHHHHHhC-cCcEEEEEeccCcccccHHHHH
Confidence 0000 13579999999765422111111 11 22334567 9999998776654322333433
No 144
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.11 E-value=0.003 Score=65.17 Aligned_cols=149 Identities=17% Similarity=0.186 Sum_probs=85.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc------cCCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP------YYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~------~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||.|+++..++++ .+..++.|+|+.+. ++....+.+.. ...+ ...||+.+
T Consensus 98 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~-------~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~--------- 160 (304)
T 3bwc_A 98 RVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGE-------VMEQSKQHFPQISRSLADPRATVRVGDGLA--------- 160 (304)
T ss_dssp EEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHH-------HHHHHHHHCHHHHGGGGCTTEEEEESCHHH---------
T ss_pred eEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHH-------HHHHHHHHhHHhhcccCCCcEEEEECcHHH---------
Confidence 8999999999999999864 34579999998642 00000000000 0001 23445432
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHhc-
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRS- 467 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~~- 467 (621)
.+.. .....+|+|++|..... +. . ..|. ..-+..+.++|+|||.|++-.-..+. .....+...|+..
T Consensus 161 ~~~~-~~~~~fDvIi~d~~~~~-~~---~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 161 FVRQ-TPDNTYDVVIIDTTDPA-GP---A----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETG 231 (304)
T ss_dssp HHHS-SCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHT
T ss_pred HHHh-ccCCceeEEEECCCCcc-cc---c----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCC
Confidence 1211 02468999999975422 11 0 1111 11223567889999999997543211 1234566778888
Q ss_pred cceeEeec-CCCCCCCCceEEEEEeec
Q psy13508 468 YKQVCIFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 468 F~~V~i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
|..|.++. +..+.+...=.|++|..-
T Consensus 232 F~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 232 FASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp CSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred CCcEEEEEeecccccCcceEEEEEeCC
Confidence 99887764 345666666678888753
No 145
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.11 E-value=0.00089 Score=66.90 Aligned_cols=95 Identities=18% Similarity=0.099 Sum_probs=62.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.|+..+.. +.++++|+|+.+. +....... ..+ ...+|+.+.. +
T Consensus 37 ~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~-------~~~~a~~~----~~~~~~~~d~~~~~------------~ 90 (261)
T 3ege_A 37 VIADIGAGTGGYSVALAN---QGLFVYAVEPSIV-------MRQQAVVH----PQVEWFTGYAENLA------------L 90 (261)
T ss_dssp EEEEETCTTSHHHHHHHT---TTCEEEEECSCHH-------HHHSSCCC----TTEEEECCCTTSCC------------S
T ss_pred EEEEEcCcccHHHHHHHh---CCCEEEEEeCCHH-------HHHHHHhc----cCCEEEECchhhCC------------C
Confidence 899999999999999886 4589999998752 11100000 023 4567776532 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|+|-+....- ++.. ..+..+.++|| ||.+++-.+.
T Consensus 91 ~~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 91 PDKSVDGVISILAIHHF--SHLE---------KSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CTTCBSEEEEESCGGGC--SSHH---------HHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCCEeEEEEcchHhhc--cCHH---------HHHHHHHHHhC-CcEEEEEEcC
Confidence 34689999998765332 2221 12234678999 9998888776
No 146
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.10 E-value=0.00013 Score=70.45 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=58.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-----C-cccccCCChhhHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-----V-KGNGDVYDPENILSLHEF 392 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-----v-~~~GDI~~~~~~~~l~~~ 392 (621)
+|||+|||+|+++..++.+ ...+++|+|+.+. ++....+++. ..| + ...||+.+.
T Consensus 56 ~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~-------~l~~a~~~~~-~~~~~~~~v~~~~~d~~~~--------- 116 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSR--QAKKVTFLELDKT-------VANQLKKNLQ-TLKCSSEQAEVINQSSLDF--------- 116 (201)
T ss_dssp EEEETTCTTCHHHHHHHHT--TCSEEEEECSCHH-------HHHHHHHHHH-HTTCCTTTEEEECSCHHHH---------
T ss_pred eEEEcCCccCHHHHHHHHc--cCCEEEEEECCHH-------HHHHHHHHHH-HhCCCccceEEEECCHHHH---------
Confidence 7999999999999987765 2368999998742 0000000000 011 1 234554321
Q ss_pred HHhhcCCCc-ccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 393 VMKSTKGRG-VHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 393 v~~~~~~~~-vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+ ....... +|+|++|..+. . ....+. +.. +...++|+|||.+++-...
T Consensus 117 ~-~~~~~~~~fD~I~~~~~~~-~--~~~~~~------l~~-~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 117 L-KQPQNQPHFDVVFLDPPFH-F--NLAEQA------ISL-LCENNWLKPNALIYVETEK 165 (201)
T ss_dssp T-TSCCSSCCEEEEEECCCSS-S--CHHHHH------HHH-HHHTTCEEEEEEEEEEEES
T ss_pred H-HhhccCCCCCEEEECCCCC-C--ccHHHH------HHH-HHhcCccCCCcEEEEEECC
Confidence 1 0111357 99999997643 1 122111 111 1126789999999987654
No 147
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.10 E-value=0.003 Score=61.40 Aligned_cols=121 Identities=12% Similarity=-0.022 Sum_probs=69.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||||||+|+++.+++.+....++++|+|+.+.. .....+++. ..| + ...||..+ .+. .+
T Consensus 61 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~-----~l~-~~ 126 (221)
T 3u81_A 61 LVLELGAYCGYSAVRMARLLQPGARLLTMEINPDC-------AAITQQMLN-FAGLQDKVTILNGASQD-----LIP-QL 126 (221)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHH-------HHHHHHHHH-HHTCGGGEEEEESCHHH-----HGG-GT
T ss_pred EEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHH-------HHHHHHHHH-HcCCCCceEEEECCHHH-----HHH-HH
Confidence 79999999999999999866567899999987420 000000000 111 1 24555432 110 01
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
........+|+|++|+.... .. ...++..++.+|+|||.+|+.-.... ....++..+...
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~-----~~-------~~~~~~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~ 186 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDR-----YL-------PDTLLLEKCGLLRKGTVLLADNVIVP--GTPDFLAYVRGS 186 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGG-----HH-------HHHHHHHHTTCCCTTCEEEESCCCCC--CCHHHHHHHHHC
T ss_pred HHhcCCCceEEEEEcCCccc-----ch-------HHHHHHHhccccCCCeEEEEeCCCCc--chHHHHHHHhhC
Confidence 00111268999999974421 11 11122222389999999998765532 245666666543
No 148
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.10 E-value=0.00032 Score=67.88 Aligned_cols=133 Identities=13% Similarity=-0.003 Sum_probs=72.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
.+||||||.|.++..+..+. +.++++|+|+.+.. +....++.. ....+ ...||+.+...
T Consensus 44 ~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~-------l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 105 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSV-------LSYALDKVLEVGVPNIKLLWVDGSDLTD---------- 105 (214)
T ss_dssp EEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHH-------HHHHHHHHHHHCCSSEEEEECCSSCGGG----------
T ss_pred eEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHH-------HHHHHHHHHHcCCCCEEEEeCCHHHHHh----------
Confidence 79999999999999888754 56899999987420 000000000 00112 45678775221
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHH-HHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-cceeEe
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCI 473 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~-l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F~~V~i 473 (621)
.+....+|+|+++....... ...+. .++...+ +..+..+|+|||.+++.+-.. .....++..+... |..+.+
T Consensus 106 ~~~~~~~D~i~~~~~~~~~~--~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 106 YFEDGEIDRLYLNFSDPWPK--KRHEK--RRLTYKTFLDTFKRILPENGEIHFKTDNR--GLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp TSCTTCCSEEEEESCCCCCS--GGGGG--GSTTSHHHHHHHHHHSCTTCEEEEEESCH--HHHHHHHHHHHHHTCEEEEE
T ss_pred hcCCCCCCEEEEECCCCccc--cchhh--hccCCHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHHCCCeeeec
Confidence 12345799999985322111 11110 1112222 225667899999999976321 1223444444432 655555
Q ss_pred ec
Q psy13508 474 FK 475 (621)
Q Consensus 474 ~K 475 (621)
.+
T Consensus 180 ~~ 181 (214)
T 1yzh_A 180 WL 181 (214)
T ss_dssp ES
T ss_pred cc
Confidence 43
No 149
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.09 E-value=0.0027 Score=66.65 Aligned_cols=114 Identities=14% Similarity=0.006 Sum_probs=68.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
+++. .+||+|||+|.++..+..+.++.++++|+|+.+. .+....++. ...| + ..++|+.+...
T Consensus 202 ~~~~--~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~-------~i~~a~~n~-~~~g~~~i~~~~~D~~~~~~--- 268 (354)
T 3tma_A 202 RPGM--RVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEK-------RLGLAREAA-LASGLSWIRFLRADARHLPR--- 268 (354)
T ss_dssp CTTC--CEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHH-------HHHHHHHHH-HHTTCTTCEEEECCGGGGGG---
T ss_pred CCCC--EEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHH-------HHHHHHHHH-HHcCCCceEEEeCChhhCcc---
Confidence 4454 7999999999999999886546789999998742 000000010 0112 2 45677775221
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|++|..... ...+......++..-+..+.++|+|||.+++-+..
T Consensus 269 ---------~~~~~D~Ii~npPyg~---r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 269 ---------FFPEVDRILANPPHGL---RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp ---------TCCCCSEEEECCCSCC-------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ---------ccCCCCEEEECCCCcC---ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 1345899999975432 21111111233344444678899999999996553
No 150
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.09 E-value=0.001 Score=65.89 Aligned_cols=107 Identities=12% Similarity=0.012 Sum_probs=61.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC---cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV---KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv---~~~GDI~~~~~~~~l 389 (621)
++|. +|||+|||.|..+.++.++. ..+++|+|+.+. ++....+ .....|. ...||..+
T Consensus 59 ~~G~--rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~-------~~~~a~~-~~~~~~~~~~~~~~~a~~------- 119 (236)
T 3orh_A 59 SKGG--RVLEVGFGMAIAASKVQEAP--IDEHWIIECNDG-------VFQRLRD-WAPRQTHKVIPLKGLWED------- 119 (236)
T ss_dssp TTCE--EEEEECCTTSHHHHHHTTSC--EEEEEEEECCHH-------HHHHHHH-HGGGCSSEEEEEESCHHH-------
T ss_pred cCCC--eEEEECCCccHHHHHHHHhC--CcEEEEEeCCHH-------HHHHHHH-HHhhCCCceEEEeehHHh-------
Confidence 4565 89999999999999887642 368899998752 0000000 0011121 22333211
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
+...+....+|.|..|..+.......... .-..+..+.++|||||.|++
T Consensus 120 ---~~~~~~~~~FD~i~~D~~~~~~~~~~~~~------~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 120 ---VAPTLPDGHFDGILYDTYPLSEETWHTHQ------FNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ---HGGGSCTTCEEEEEECCCCCBGGGTTTHH------HHHHHHTHHHHEEEEEEEEE
T ss_pred ---hcccccccCCceEEEeeeecccchhhhcc------hhhhhhhhhheeCCCCEEEE
Confidence 11223456899999998665543332211 11122356789999999974
No 151
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.09 E-value=0.00045 Score=69.63 Aligned_cols=97 Identities=11% Similarity=0.159 Sum_probs=62.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.|+..+.. ..++++|+|+.+. +.....+. ..++ ...+|+.+.. +
T Consensus 60 ~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------~ 114 (279)
T 3ccf_A 60 FILDLGCGTGQLTEKIAQ---SGAEVLGTDNAAT-------MIEKARQN---YPHLHFDVADARNFR------------V 114 (279)
T ss_dssp EEEEETCTTSHHHHHHHH---TTCEEEEEESCHH-------HHHHHHHH---CTTSCEEECCTTTCC------------C
T ss_pred EEEEecCCCCHHHHHHHh---CCCeEEEEECCHH-------HHHHHHhh---CCCCEEEECChhhCC------------c
Confidence 899999999999999887 4679999998742 00000000 0112 3466776521 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|+|........ +.. ..+..+.++|+|||.+++-++..
T Consensus 115 -~~~fD~v~~~~~l~~~~--d~~---------~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 115 -DKPLDAVFSNAMLHWVK--EPE---------AAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp -SSCEEEEEEESCGGGCS--CHH---------HHHHHHHHHEEEEEEEEEEEECT
T ss_pred -CCCcCEEEEcchhhhCc--CHH---------HHHHHHHHhcCCCcEEEEEecCC
Confidence 35799999987654322 111 12234568899999999987754
No 152
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.09 E-value=0.0019 Score=59.65 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=71.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
++||+|||+|.++.++.. ...+++|+|+.+.. .....+.+. ..| + ...+|+.+ . +
T Consensus 38 ~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~~~~~~d~~~-----~----~- 96 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGA-------IEVTKQNLA-KFNIKNCQIIKGRAED-----V----L- 96 (183)
T ss_dssp EEEEESCCCSHHHHHHHT---TSSEEEEEECSHHH-------HHHHHHHHH-HTTCCSEEEEESCHHH-----H----G-
T ss_pred EEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHH-------HHHHHHHHH-HcCCCcEEEEECCccc-----c----c-
Confidence 899999999999998886 56899999987420 000000000 011 1 23455542 1 1
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEee
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 474 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~ 474 (621)
....+|+|++++. .+... .+.+ +.++ |||.+++-...... ...++..|+.+-..+..+
T Consensus 97 ---~~~~~D~i~~~~~------~~~~~------~l~~---~~~~--~gG~l~~~~~~~~~--~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 97 ---DKLEFNKAFIGGT------KNIEK------IIEI---LDKK--KINHIVANTIVLEN--AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ---GGCCCSEEEECSC------SCHHH------HHHH---HHHT--TCCEEEEEESCHHH--HHHHHHHHHHTTCEEEEE
T ss_pred ---cCCCCcEEEECCc------ccHHH------HHHH---HhhC--CCCEEEEEeccccc--HHHHHHHHHHcCCeEEEE
Confidence 1257999999986 11211 1111 1222 99999998866422 446777788776677777
Q ss_pred cCCCCCC
Q psy13508 475 KPNTSRP 481 (621)
Q Consensus 475 KP~aSR~ 481 (621)
.+..++.
T Consensus 155 ~~~~~~~ 161 (183)
T 2yxd_A 155 NVFISYA 161 (183)
T ss_dssp EEEEEEE
T ss_pred Eeeeehh
Confidence 6655554
No 153
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.09 E-value=0.0021 Score=62.97 Aligned_cols=119 Identities=10% Similarity=-0.017 Sum_probs=69.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
.++. +|||+|||+|.++..++++ .++++|+|+.+.. .....+.+. ..| + ...+|+.+..
T Consensus 90 ~~~~--~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~~~~~~~d~~~~~--- 153 (248)
T 2yvl_A 90 NKEK--RVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEF-------YKTAQKNLK-KFNLGKNVKFFNVDFKDAE--- 153 (248)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHH---SSEEEEECSCHHH-------HHHHHHHHH-HTTCCTTEEEECSCTTTSC---
T ss_pred CCCC--EEEEeCCCccHHHHHHHHh---CCEEEEEecCHHH-------HHHHHHHHH-HcCCCCcEEEEEcChhhcc---
Confidence 4565 8999999999999999886 5799999986420 000000000 011 1 3456666421
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
....++|+|++|... .... +..+.++|+|||.+++-..... ....+...|...
T Consensus 154 ---------~~~~~~D~v~~~~~~-------~~~~---------l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~ 206 (248)
T 2yvl_A 154 ---------VPEGIFHAAFVDVRE-------PWHY---------LEKVHKSLMEGAPVGFLLPTAN--QVIKLLESIENY 206 (248)
T ss_dssp ---------CCTTCBSEEEECSSC-------GGGG---------HHHHHHHBCTTCEEEEEESSHH--HHHHHHHHSTTT
T ss_pred ---------cCCCcccEEEECCcC-------HHHH---------HHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHhh
Confidence 023579999997531 1111 2235688999999999776421 133455555544
Q ss_pred cceeEee
Q psy13508 468 YKQVCIF 474 (621)
Q Consensus 468 F~~V~i~ 474 (621)
|..+.++
T Consensus 207 f~~~~~~ 213 (248)
T 2yvl_A 207 FGNLEVV 213 (248)
T ss_dssp EEEEEEE
T ss_pred CCcceEE
Confidence 6555443
No 154
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.08 E-value=0.0035 Score=62.53 Aligned_cols=114 Identities=12% Similarity=0.099 Sum_probs=65.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC---CCCCCcccCCCCCCcc--cc-CCC-ccccc-CCChh
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH---DFKLDDFFAGPSETFE--PY-YGV-KGNGD-VYDPE 384 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~---~~~l~~~~~~~~~~~~--~~-~Gv-~~~GD-I~~~~ 384 (621)
+++. +|||+|||+|.++.++..+.++.++++|+|+.+.. +..++.. .+.+. .. ..+ ...+| +....
T Consensus 42 ~~~~--~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a----~~~~~~~~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 42 KPGE--KILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQA----WNHLLAGPLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHH----HHHHHTSTTGGGEEEECSCCTTTCC
T ss_pred CCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHH----HHHHHhcCCCCceEEEECChhhhcc
Confidence 4555 89999999999999999876666899999997530 0000000 00000 00 012 23555 43211
Q ss_pred hHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 385 NILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 385 ~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
. .+....+|+|+|.+....-+.+ + .+ +.....+++|||.+++-.+...
T Consensus 116 ~----------~~~~~~fD~v~~~~~l~~~~~~--~-------~~--~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 116 G----------PIADQHFDRVVLAHSLWYFASA--N-------AL--ALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp G----------GGTTCCCSEEEEESCGGGSSCH--H-------HH--HHHHHHHTTTCSEEEEEEECSS
T ss_pred C----------CCCCCCEEEEEEccchhhCCCH--H-------HH--HHHHHHHhCCCCEEEEEEecCC
Confidence 0 1134689999998766443322 1 01 1123345667999999887753
No 155
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.07 E-value=0.00027 Score=70.15 Aligned_cols=102 Identities=12% Similarity=-0.042 Sum_probs=59.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GDI~~~~~~~~l~~~v 393 (621)
++||+|||+|+.+.+++......++++++|+.+.. .....+.+ ...|. ...||..+ .+....
T Consensus 73 ~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~-------~~~a~~~~-~~~g~~~~i~~~~gda~~-----~l~~l~ 139 (237)
T 3c3y_A 73 KTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREA-------YEIGLPFI-RKAGVEHKINFIESDAML-----ALDNLL 139 (237)
T ss_dssp EEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHH-------HHHHHHHH-HHTTCGGGEEEEESCHHH-----HHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHH-HHcCCCCcEEEEEcCHHH-----HHHHHH
Confidence 79999999999999999876557899999986420 00000000 01122 23455432 111211
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
........+|+|++|+.. .+.. ..+..+..+|+|||.+|+
T Consensus 140 ~~~~~~~~fD~I~~d~~~-----~~~~---------~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDADK-----PNYI---------KYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp HSTTCTTCEEEEEECSCG-----GGHH---------HHHHHHHHHEEEEEEEEE
T ss_pred hccCCCCCcCEEEECCch-----HHHH---------HHHHHHHHhcCCCeEEEE
Confidence 111013579999999642 1111 122345689999999987
No 156
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.07 E-value=0.0012 Score=64.75 Aligned_cols=104 Identities=12% Similarity=-0.052 Sum_probs=57.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||||||+|.++.++..+ ...+++|+|+.+. ++....+.. ...| + ...||+.+. ..
T Consensus 63 ~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~-------~l~~a~~~~-~~~~~~v~~~~~d~~~~----------~~ 122 (236)
T 1zx0_A 63 RVLEVGFGMAIAASKVQEA--PIDEHWIIECNDG-------VFQRLRDWA-PRQTHKVIPLKGLWEDV----------AP 122 (236)
T ss_dssp EEEEECCTTSHHHHHHHTS--CEEEEEEEECCHH-------HHHHHHHHG-GGCSSEEEEEESCHHHH----------GG
T ss_pred eEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHH-------HHHHHHHHH-HhcCCCeEEEecCHHHh----------hc
Confidence 8999999999999988643 2348999998752 100000000 0011 1 345555431 11
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
.+....+|+|++|.-... ...... ...-..+..+.++|||||.|++=
T Consensus 123 ~~~~~~fD~V~~d~~~~~--~~~~~~----~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 123 TLPDGHFDGILYDTYPLS--EETWHT----HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GSCTTCEEEEEECCCCCB--GGGTTT----HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCCceEEEEECCcccc--hhhhhh----hhHHHHHHHHHHhcCCCeEEEEE
Confidence 233568999999843321 111110 01112234577899999999864
No 157
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.07 E-value=0.00055 Score=73.22 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=75.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||.|.++.++..+ .++++|+|+.+.. +....+++. ..| + ...+|+.+..
T Consensus 236 ~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~a-------l~~A~~n~~-~~~~~v~~~~~D~~~~~----------- 293 (381)
T 3dmg_A 236 QVLDLGAGYGALTLPLARM---GAEVVGVEDDLAS-------VLSLQKGLE-ANALKAQALHSDVDEAL----------- 293 (381)
T ss_dssp EEEEETCTTSTTHHHHHHT---TCEEEEEESBHHH-------HHHHHHHHH-HTTCCCEEEECSTTTTS-----------
T ss_pred EEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHH-------HHHHHHHHH-HcCCCeEEEEcchhhcc-----------
Confidence 8999999999999999875 4699999987420 000000000 011 2 4567877632
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEee
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 474 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~ 474 (621)
.....+|+|+|+..+...+....+. ...-+..+.++|+|||.+++-.-... ..-..+...|..+..+
T Consensus 294 -~~~~~fD~Ii~npp~~~~~~~~~~~------~~~~l~~~~~~LkpGG~l~iv~n~~l-----~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 294 -TEEARFDIIVTNPPFHVGGAVILDV------AQAFVNVAAARLRPGGVFFLVSNPFL-----KYEPLLEEKFGAFQTL 360 (381)
T ss_dssp -CTTCCEEEEEECCCCCTTCSSCCHH------HHHHHHHHHHHEEEEEEEEEEECTTS-----CHHHHHHHHHSCCEEE
T ss_pred -ccCCCeEEEEECCchhhcccccHHH------HHHHHHHHHHhcCcCcEEEEEEcCCC-----ChHHHHHHhhccEEEE
Confidence 1236899999997665433221111 11223357789999999999765532 2345567778777766
No 158
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.05 E-value=0.002 Score=60.18 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=61.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|+++.+++.+ ...+++|+|+.+.. ......++. ..| + ...||+.+. +.. +
T Consensus 47 ~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~~~~~~~d~~~~-----~~~-~ 110 (187)
T 2fhp_A 47 MALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAA-------LKVIKENIA-ITKEPEKFEVRKMDANRA-----LEQ-F 110 (187)
T ss_dssp EEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHH-------HHHHHHHHH-HHTCGGGEEEEESCHHHH-----HHH-H
T ss_pred CEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHH-------HHHHHHHHH-HhCCCcceEEEECcHHHH-----HHH-H
Confidence 8999999999999988763 35799999987420 000000000 011 1 345665531 111 1
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
. .....+|+|++|..... ...... +.. +.+.++|+|||.+++-....
T Consensus 111 ~--~~~~~fD~i~~~~~~~~---~~~~~~------~~~-l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 111 Y--EEKLQFDLVLLDPPYAK---QEIVSQ------LEK-MLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp H--HTTCCEEEEEECCCGGG---CCHHHH------HHH-HHHTTCEEEEEEEEEEEETT
T ss_pred H--hcCCCCCEEEECCCCCc---hhHHHH------HHH-HHHhcccCCCCEEEEEeCCc
Confidence 1 12468999999975321 111111 111 13588999999999876654
No 159
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.05 E-value=0.00027 Score=68.87 Aligned_cols=101 Identities=11% Similarity=0.055 Sum_probs=59.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
++||+|||.|.++.+++......++++|+|+.+.. .....+.+. ..| + ...||+.+ .+.. +
T Consensus 72 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-------~~~a~~~~~-~~g~~~~i~~~~~d~~~-----~~~~-~ 137 (229)
T 2avd_A 72 KALDLGTFTGYSALALALALPADGRVVTCEVDAQP-------PELGRPLWR-QAEAEHKIDLRLKPALE-----TLDE-L 137 (229)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHH-------HHHHHHHHH-HTTCTTTEEEEESCHHH-----HHHH-H
T ss_pred EEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HCCCCCeEEEEEcCHHH-----HHHH-H
Confidence 79999999999999998765446899999987521 000000000 011 1 23455532 1111 1
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
........+|+|++|+.. .+. ...+..+..+|+|||.+|+
T Consensus 138 ~~~~~~~~~D~v~~d~~~-----~~~---------~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDADK-----ENC---------SAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp HHTTCTTCEEEEEECSCS-----TTH---------HHHHHHHHHHEEEEEEEEE
T ss_pred HhcCCCCCccEEEECCCH-----HHH---------HHHHHHHHHHcCCCeEEEE
Confidence 110011579999999752 111 1123346689999999998
No 160
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.03 E-value=0.00029 Score=68.05 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=61.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcccc-CCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPY-YGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~-~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
++||+|||+|.++..+..+ + .+++|+|+.+.. +....+..... ..+ ...||+.+..
T Consensus 41 ~vLDlG~G~G~~~~~l~~~-~--~~v~~vD~s~~~-------~~~a~~~~~~~~~~~~~~~~d~~~~~------------ 98 (227)
T 1ve3_A 41 KVLDLACGVGGFSFLLEDY-G--FEVVGVDISEDM-------IRKAREYAKSRESNVEFIVGDARKLS------------ 98 (227)
T ss_dssp EEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHH-------HHHHHHHHHHTTCCCEEEECCTTSCC------------
T ss_pred eEEEEeccCCHHHHHHHHc-C--CEEEEEECCHHH-------HHHHHHHHHhcCCCceEEECchhcCC------------
Confidence 8999999999999988764 2 389999987420 00000000000 112 3567777532
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++.........++.. ..+..+.++|+|||.+++-.+.
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~~~~~---------~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEPLELN---------QVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCHHHHH---------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCcEEEEEEcCchHhCCHHHHH---------HHHHHHHHHcCCCcEEEEEecC
Confidence 124589999998652222221211 1223456889999999998765
No 161
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.02 E-value=0.0028 Score=67.44 Aligned_cols=123 Identities=10% Similarity=-0.006 Sum_probs=72.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC------C-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG------V-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G------v-~~~GDI~~~~~~~~l~~ 391 (621)
+|||+|||.|.++.++..+ .+..+++|+|+.+. .+....+++. ..| + ...+|+.++
T Consensus 225 ~VLDlGcG~G~~s~~la~~-~p~~~V~gvD~s~~-------al~~Ar~n~~-~ngl~~~~~v~~~~~D~~~~-------- 287 (375)
T 4dcm_A 225 EIVDLGCGNGVIGLTLLDK-NPQAKVVFVDESPM-------AVASSRLNVE-TNMPEALDRCEFMINNALSG-------- 287 (375)
T ss_dssp EEEEETCTTCHHHHHHHHH-CTTCEEEEEESCHH-------HHHHHHHHHH-HHCGGGGGGEEEEECSTTTT--------
T ss_pred eEEEEeCcchHHHHHHHHH-CCCCEEEEEECcHH-------HHHHHHHHHH-HcCCCcCceEEEEechhhcc--------
Confidence 8999999999999999875 35789999998742 0000000000 011 1 256777652
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcccee
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQV 471 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V 471 (621)
.....+|+|+||..+...... .+ .+...-+..+.++|+|||.+++=.... . .....+.+.|..+
T Consensus 288 -----~~~~~fD~Ii~nppfh~~~~~-~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~-~----~~~~~l~~~fg~~ 351 (375)
T 4dcm_A 288 -----VEPFRFNAVLCNPPFHQQHAL-TD-----NVAWEMFHHARRCLKINGELYIVANRH-L----DYFHKLKKIFGNC 351 (375)
T ss_dssp -----CCTTCEEEEEECCCC--------C-----CHHHHHHHHHHHHEEEEEEEEEEEETT-S----CHHHHHHHHHSCC
T ss_pred -----CCCCCeeEEEECCCcccCccc-CH-----HHHHHHHHHHHHhCCCCcEEEEEEECC-c----CHHHHHHHhcCCE
Confidence 134689999999765432111 01 111223446778999999999955443 2 2234566677766
Q ss_pred Eee
Q psy13508 472 CIF 474 (621)
Q Consensus 472 ~i~ 474 (621)
.+.
T Consensus 352 ~~~ 354 (375)
T 4dcm_A 352 TTI 354 (375)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 162
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.02 E-value=0.00028 Score=70.32 Aligned_cols=99 Identities=17% Similarity=0.090 Sum_probs=61.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..+..+ ..+++|+|+.+. +.....+. ..++ ...||+.+..
T Consensus 53 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------- 106 (263)
T 3pfg_A 53 SLLDVACGTGMHLRHLADS---FGTVEGLELSAD-------MLAIARRR---NPDAVLHHGDMRDFS------------- 106 (263)
T ss_dssp EEEEETCTTSHHHHHHTTT---SSEEEEEESCHH-------HHHHHHHH---CTTSEEEECCTTTCC-------------
T ss_pred cEEEeCCcCCHHHHHHHHc---CCeEEEEECCHH-------HHHHHHhh---CCCCEEEECChHHCC-------------
Confidence 8999999999999988764 368999998642 00000000 0123 4577887632
Q ss_pred CCCcccEEEecC-CCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADG-GFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg-~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|+|.+ ....-. +.++ ....+..+.++|+|||.||+-.+.
T Consensus 107 ~~~~fD~v~~~~~~l~~~~--~~~~------~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 107 LGRRFSAVTCMFSSIGHLA--GQAE------LDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp CSCCEEEEEECTTGGGGSC--HHHH------HHHHHHHHHHTEEEEEEEEECCCC
T ss_pred ccCCcCEEEEcCchhhhcC--CHHH------HHHHHHHHHHhcCCCcEEEEEecc
Confidence 146899999976 443221 1111 112233456899999999996543
No 163
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.01 E-value=0.0037 Score=62.90 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=64.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.++..+ ..+++|+|+.+.. .....+.+ ...| + ...||+.+...
T Consensus 71 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~-------- 131 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAER---GHQVILCDLSAQM-------IDRAKQAA-EAKGVSDNMQFIHCAAQDVAS-------- 131 (285)
T ss_dssp EEEEETCTTCHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHHH-HC-CCGGGEEEEESCGGGTGG--------
T ss_pred EEEEeCCcchHHHHHHHHC---CCEEEEEECCHHH-------HHHHHHHH-HhcCCCcceEEEEcCHHHhhh--------
Confidence 8999999999999999875 5789999987420 00000000 0011 1 35677765321
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|+|.+......+ .. ..+..+.++|+|||.+++-.+..
T Consensus 132 ---~~~~~fD~v~~~~~l~~~~~--~~---------~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 132 ---HLETPVDLILFHAVLEWVAD--PR---------SVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp ---GCSSCEEEEEEESCGGGCSC--HH---------HHHHHHHHTEEEEEEEEEEEEBH
T ss_pred ---hcCCCceEEEECchhhcccC--HH---------HHHHHHHHHcCCCeEEEEEEeCC
Confidence 13578999999876644322 11 12334678999999999988763
No 164
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.98 E-value=0.0034 Score=60.23 Aligned_cols=101 Identities=11% Similarity=-0.047 Sum_probs=62.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
.++. +|||+|||+|.++..+..+.++.++++|+|+.+.. .....+.+. ....+ ...+|+...-
T Consensus 76 ~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~-------~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 141 (215)
T 2yxe_A 76 KPGM--KVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPEL-------AEKAERTLRKLGYDNVIVIVGDGTLGY----- 141 (215)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHH-------HHHHHHHHHHHTCTTEEEEESCGGGCC-----
T ss_pred CCCC--EEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHH-------HHHHHHHHHHcCCCCeEEEECCcccCC-----
Confidence 4455 89999999999999998876556899999986420 000000000 00011 2355653210
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++++...... + .+..+|+|||.+|+-+-.
T Consensus 142 -------~~~~~fD~v~~~~~~~~~~----~-------------~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 -------EPLAPYDRIYTTAAGPKIP----E-------------PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp -------GGGCCEEEEEESSBBSSCC----H-------------HHHHTEEEEEEEEEEESS
T ss_pred -------CCCCCeeEEEECCchHHHH----H-------------HHHHHcCCCcEEEEEECC
Confidence 0134799999998764321 1 356789999999998754
No 165
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.97 E-value=0.00025 Score=65.20 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=59.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--CC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--GV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
++||+|||+|.++.++..+ + .+++|+|+.+. .+....+++. .. .+ ...+|+.+. +.. ..
T Consensus 44 ~vLD~GcG~G~~~~~l~~~-~--~~v~~vD~~~~-------~~~~a~~~~~-~~~~~~~~~~~d~~~~-----~~~-~~- 105 (171)
T 1ws6_A 44 RFLDPFAGSGAVGLEAASE-G--WEAVLVEKDPE-------AVRLLKENVR-RTGLGARVVALPVEVF-----LPE-AK- 105 (171)
T ss_dssp EEEEETCSSCHHHHHHHHT-T--CEEEEECCCHH-------HHHHHHHHHH-HHTCCCEEECSCHHHH-----HHH-HH-
T ss_pred eEEEeCCCcCHHHHHHHHC-C--CeEEEEeCCHH-------HHHHHHHHHH-HcCCceEEEeccHHHH-----HHh-hh-
Confidence 7999999999999998875 2 34999998642 0000000000 01 12 334555431 111 11
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
..+..+|+|++|..+. + ...+. +..+.- .++|+|||.+++-....
T Consensus 106 -~~~~~~D~i~~~~~~~--~--~~~~~------~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 106 -AQGERFTVAFMAPPYA--M--DLAAL------FGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp -HTTCCEEEEEECCCTT--S--CTTHH------HHHHHH-HTCEEEEEEEEEEEETT
T ss_pred -ccCCceEEEEECCCCc--h--hHHHH------HHHHHh-hcccCCCcEEEEEeCCc
Confidence 0235799999998654 1 11111 111111 58999999999987764
No 166
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.97 E-value=0.00072 Score=69.09 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=28.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++..+..+. +..+++|+|+.+
T Consensus 49 ~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~ 80 (292)
T 3g07_A 49 DVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDS 80 (292)
T ss_dssp EEEEESCTTCHHHHHHHHHT-CCSEEEEEESCH
T ss_pred cEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCH
Confidence 89999999999999998865 357999999975
No 167
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.96 E-value=0.00078 Score=68.85 Aligned_cols=152 Identities=14% Similarity=0.087 Sum_probs=83.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|+++..++++ .+..++.++|+.+.- +.....+ ......+. ...+ ...||..+ .+..
T Consensus 81 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~-~~~~~~~~-~~~v~~~~~D~~~---------~l~~- 147 (283)
T 2i7c_A 81 NVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYF-KNISCGYE-DKRVNVFIEDASK---------FLEN- 147 (283)
T ss_dssp EEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHC-TTTSGGGG-STTEEEEESCHHH---------HHHH-
T ss_pred eEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHh-HHhccccC-CCcEEEEECChHH---------HHHh-
Confidence 8999999999999999864 346799999987520 0000000 00000000 0011 23444432 1211
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHhccceeEe
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRSYKQVCI 473 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~~F~~V~i 473 (621)
....+|+|++|.... .+... .|. ..-+..+.+.|+|||.||+..-.... .....++..++..|..|.+
T Consensus 148 -~~~~fD~Ii~d~~~~-~~~~~-------~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 218 (283)
T 2i7c_A 148 -VTNTYDVIIVDSSDP-IGPAE-------TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 218 (283)
T ss_dssp -CCSCEEEEEEECCCT-TTGGG-------GGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred -CCCCceEEEEcCCCC-CCcch-------hhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEE
Confidence 256899999997432 22211 111 12223567889999999998543211 1224556778888998876
Q ss_pred ecC-CCCCCCCceEEEEEee
Q psy13508 474 FKP-NTSRPANSERYIVCKW 492 (621)
Q Consensus 474 ~KP-~aSR~~ssE~YlVc~g 492 (621)
+.. ..+-++.---|++|..
T Consensus 219 ~~~~vP~y~~g~~g~~~~s~ 238 (283)
T 2i7c_A 219 ANISIPTYPCGCIGILCCSK 238 (283)
T ss_dssp EEEECTTSGGGEEEEEEEES
T ss_pred EEEEcCCcCCCcEEEEEEeC
Confidence 532 2333333335788764
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.96 E-value=0.00028 Score=70.14 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=27.8
Q ss_pred eEEEeccCCChhHHHHHHhc-CCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRK-KWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~-~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++..+..+. .+..+++|+|+.+
T Consensus 54 ~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~ 87 (250)
T 1o9g_A 54 TLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDP 87 (250)
T ss_dssp EEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCH
T ss_pred eEEECCCCCCHHHHHHHHHhccCCCeEEEEECCH
Confidence 89999999999999988762 2457899999874
No 169
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.95 E-value=0.0004 Score=68.67 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=63.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
.++. +|||+|||+|.++..+..+ .++++|+|+.+.. ......+ .. ...++ ...||+.+..
T Consensus 38 ~~~~--~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~------~~~~~~~~~~d~~~~~------ 99 (263)
T 2yqz_A 38 GEEP--VFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AG------VDRKVQVVQADARAIP------ 99 (263)
T ss_dssp SSCC--EEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TT------SCTTEEEEESCTTSCC------
T ss_pred CCCC--EEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hc------cCCceEEEEcccccCC------
Confidence 4454 8999999999999998875 4789999987420 0000000 00 00112 3567776522
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|++-....... +.. ..+..+.++|+|||.+++- +..
T Consensus 100 ------~~~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~~~-~~~ 143 (263)
T 2yqz_A 100 ------LPDESVHGVIVVHLWHLVP--DWP---------KVLAEAIRVLKPGGALLEG-WDQ 143 (263)
T ss_dssp ------SCTTCEEEEEEESCGGGCT--THH---------HHHHHHHHHEEEEEEEEEE-EEE
T ss_pred ------CCCCCeeEEEECCchhhcC--CHH---------HHHHHHHHHCCCCcEEEEE-ecC
Confidence 1346799999977654322 111 1223456889999999987 443
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.94 E-value=0.0012 Score=64.16 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=64.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcC----CCCeEEEEecCCCCCCCCCcccCCCCCCccc-------cCCC-cccccC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKK----WRAKGIGFTLTGSHDFKLDDFFAGPSETFEP-------YYGV-KGNGDV 380 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~----~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-------~~Gv-~~~GDI 380 (621)
+++. +|||+|||+|.++..+..+.+ +.++++|+|+.+.. .....+.+.. ...+ ...||+
T Consensus 79 ~~~~--~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~-------~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 79 KPGS--RAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDL-------VNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHH-------HHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred CCCC--EEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHH-------HHHHHHHHHHcCccccccCCEEEEECCh
Confidence 5565 899999999999999988765 56799999986420 0000000000 0012 345676
Q ss_pred CChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 381 ~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.+... .... ....+|+|++++..... . ..+...|+|||.+|+=+-.
T Consensus 150 ~~~~~-~~~~-------~~~~fD~I~~~~~~~~~----~-------------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 150 YQVNE-EEKK-------ELGLFDAIHVGASASEL----P-------------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGCCH-HHHH-------HHCCEEEEEECSBBSSC----C-------------HHHHHHEEEEEEEEEEEEE
T ss_pred Hhccc-ccCc-------cCCCcCEEEECCchHHH----H-------------HHHHHhcCCCcEEEEEEcc
Confidence 64210 0000 13479999999876421 0 2346789999999987765
No 171
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.94 E-value=0.0055 Score=66.13 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=70.7
Q ss_pred chhhHHHHHHHHHHhcCcCCCCcccCCCCCCCCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcc
Q psy13508 281 FLNRAAMKMANMDKRLNSMFTQPVRENGSPLLGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDF 360 (621)
Q Consensus 281 ~~sRAa~KL~EId~~~~~~~~~~~~~~~~~~~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~ 360 (621)
|-.-..-.+.+|.+..++ ++++ +|+|||||.|..+-.+..+.+ ..+++|+|+.+. .
T Consensus 154 YGEt~~~~i~~il~~l~l--------------~~gd--~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~-------~ 209 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKM--------------TDDD--LFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADI-------P 209 (438)
T ss_dssp GGGTHHHHHHHHHHHHCC--------------CTTC--EEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHH-------H
T ss_pred cCCCCHHHHHHHHHhcCC--------------CCCC--EEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHH-------H
Confidence 333344445566666654 5676 899999999999988876543 347999999741 0
Q ss_pred cCCCCCC---c---cccCC-----C-cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHH
Q psy13508 361 FAGPSET---F---EPYYG-----V-KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLY 428 (621)
Q Consensus 361 ~~~~~~~---~---~~~~G-----v-~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~ 428 (621)
....... + ...+| + ..+||+++...... + ..+|+|++-... . .++..+ .
T Consensus 210 lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~----~------~~aDVVf~Nn~~-F--~pdl~~------a 270 (438)
T 3uwp_A 210 AKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER----I------ANTSVIFVNNFA-F--GPEVDH------Q 270 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH----H------HTCSEEEECCTT-C--CHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc----c------CCccEEEEcccc-c--CchHHH------H
Confidence 0000000 0 00011 2 56899998653221 1 258999985322 1 122211 2
Q ss_pred HHHHHhhhhccCCCcEEEEE
Q psy13508 429 LCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 429 l~~l~~al~~Lr~GG~fV~K 448 (621)
|.+ .++.|||||.||+-
T Consensus 271 L~E---i~RvLKPGGrIVss 287 (438)
T 3uwp_A 271 LKE---RFANMKEGGRIVSS 287 (438)
T ss_dssp HHH---HHTTSCTTCEEEES
T ss_pred HHH---HHHcCCCCcEEEEe
Confidence 223 45799999999874
No 172
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.94 E-value=0.00079 Score=68.86 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=28.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++..+..+ +.++++|+|+.+
T Consensus 126 ~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~ 156 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKF--SDAIVFATDVSS 156 (284)
T ss_dssp EEEEESCTTSHHHHHHHHH--SSCEEEEEESCH
T ss_pred EEEEEeCchhHHHHHHHHC--CCCEEEEEECCH
Confidence 7999999999999999876 678999999974
No 173
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.94 E-value=0.0029 Score=62.19 Aligned_cols=96 Identities=8% Similarity=0.046 Sum_probs=59.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.+++. ..+.++++|+|+.+.. .....+.+. ..| + ...||+.+. .. ..
T Consensus 74 ~vLDiG~G~G~~~~~la~-~~~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~~--~~---~~- 138 (232)
T 3ntv_A 74 NILEIGTAIGYSSMQFAS-ISDDIHVTTIERNETM-------IQYAKQNLA-TYHFENQVRIIEGNALEQ--FE---NV- 138 (232)
T ss_dssp EEEEECCSSSHHHHHHHT-TCTTCEEEEEECCHHH-------HHHHHHHHH-HTTCTTTEEEEESCGGGC--HH---HH-
T ss_pred EEEEEeCchhHHHHHHHH-hCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEECCHHHH--HH---hh-
Confidence 899999999999999887 3457899999987420 000000000 011 2 356777642 11 00
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
....+|+|++|+.... .. ..+..+..+|+|||.+|+
T Consensus 139 ----~~~~fD~V~~~~~~~~-----~~---------~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 139 ----NDKVYDMIFIDAAKAQ-----SK---------KFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ----TTSCEEEEEEETTSSS-----HH---------HHHHHHGGGEEEEEEEEE
T ss_pred ----ccCCccEEEEcCcHHH-----HH---------HHHHHHHHhcCCCeEEEE
Confidence 1457999999975322 11 123346689999999988
No 174
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.92 E-value=0.00099 Score=65.73 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=62.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+. .++++|+|+.+. +.....+.. ...| + ...||+.+..
T Consensus 35 ~~~~--~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~-------~l~~a~~~~-~~~~~~~~v~~~~~d~~~~~--- 99 (256)
T 1nkv_A 35 KPGT--RILDLGSGSGEMLCTWARDH--GITGTGIDMSSL-------FTAQAKRRA-EELGVSERVHFIHNDAAGYV--- 99 (256)
T ss_dssp CTTC--EEEEETCTTCHHHHHHHHHT--CCEEEEEESCHH-------HHHHHHHHH-HHTTCTTTEEEEESCCTTCC---
T ss_pred CCCC--EEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHH-------HHHHHHHHH-HhcCCCcceEEEECChHhCC---
Confidence 4555 89999999999999998765 468999998742 000000000 0011 2 3567777532
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+ ...+|+|+|-+...... +. ...+..+.++|||||.+++-.
T Consensus 100 ---------~-~~~fD~V~~~~~~~~~~--~~---------~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 ---------A-NEKCDVAACVGATWIAG--GF---------AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ---------C-SSCEEEEEEESCGGGTS--SS---------HHHHHHHTTSEEEEEEEEEEE
T ss_pred ---------c-CCCCCEEEECCChHhcC--CH---------HHHHHHHHHHcCCCeEEEEec
Confidence 1 45799999965543221 11 112334678999999999865
No 175
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.91 E-value=0.0075 Score=60.28 Aligned_cols=139 Identities=13% Similarity=-0.081 Sum_probs=73.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
++||+|||+|.++-.+.... +.++++|+|+.+.. .....++.. ..| + ...||+.+.. .
T Consensus 83 ~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~-------~~~a~~~~~-~~~l~~v~~~~~d~~~~~---------~ 144 (249)
T 3g89_A 83 RVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKK-------VAFVERAIE-VLGLKGARALWGRAEVLA---------R 144 (249)
T ss_dssp EEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHH-------HHHHHHHHH-HHTCSSEEEEECCHHHHT---------T
T ss_pred EEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHH-------HHHHHHHHH-HhCCCceEEEECcHHHhh---------c
Confidence 89999999999998887643 57899999987420 000000000 011 1 2345543210 0
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHH---HHHHHHhc-cce
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAG---LLYLLYRS-YKQ 470 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~---ll~~l~~~-F~~ 470 (621)
.......||+|+|.+-. +.+. -+..+..+|+|||.|++=. +.. ...+ +...+..+ |+.
T Consensus 145 ~~~~~~~fD~I~s~a~~------~~~~---------ll~~~~~~LkpgG~l~~~~--g~~-~~~e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 145 EAGHREAYARAVARAVA------PLCV---------LSELLLPFLEVGGAAVAMK--GPR-VEEELAPLPPALERLGGRL 206 (249)
T ss_dssp STTTTTCEEEEEEESSC------CHHH---------HHHHHGGGEEEEEEEEEEE--CSC-CHHHHTTHHHHHHHHTEEE
T ss_pred ccccCCCceEEEECCcC------CHHH---------HHHHHHHHcCCCeEEEEEe--CCC-cHHHHHHHHHHHHHcCCeE
Confidence 00013689999997532 1111 1225678999999988622 211 1222 23334433 433
Q ss_pred eEeecCCCCCCCCceEEEEEeecC
Q psy13508 471 VCIFKPNTSRPANSERYIVCKWKR 494 (621)
Q Consensus 471 V~i~KP~aSR~~ssE~YlVc~g~~ 494 (621)
+.+. +........+++++...+.
T Consensus 207 ~~~~-~~~~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 207 GEVL-ALQLPLSGEARHLVVLEKT 229 (249)
T ss_dssp EEEE-EEECTTTCCEEEEEEEEEC
T ss_pred EEEE-EeeCCCCCCcEEEEEEEeC
Confidence 3322 2222233467888766554
No 176
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.91 E-value=0.0031 Score=64.15 Aligned_cols=146 Identities=14% Similarity=0.138 Sum_probs=85.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----c--CCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----Y--YGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~--~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||.|+.+.+++++ .+..++.++|+.+. ++....+.+.. . ..+ ...||..+
T Consensus 78 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~-------~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~--------- 140 (275)
T 1iy9_A 78 HVLVVGGGDGGVIREILKH-PSVKKATLVDIDGK-------VIEYSKKFLPSIAGKLDDPRVDVQVDDGFM--------- 140 (275)
T ss_dssp EEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHH-------HHHHHHHHCHHHHTTTTSTTEEEEESCSHH---------
T ss_pred EEEEECCchHHHHHHHHhC-CCCceEEEEECCHH-------HHHHHHHHhHhhccccCCCceEEEECcHHH---------
Confidence 7999999999999998864 34579999998652 00000000100 0 011 23455542
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCch-h--hHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHh
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQE-N--IQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYR 466 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~-~--~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~ 466 (621)
++.. ....+|+|++|..... +.. . ..+. +..+.+.|+|||.||+-...... .....++..|+.
T Consensus 141 ~l~~--~~~~fD~Ii~d~~~~~-~~~~~l~~~~~---------~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 208 (275)
T 1iy9_A 141 HIAK--SENQYDVIMVDSTEPV-GPAVNLFTKGF---------YAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKE 208 (275)
T ss_dssp HHHT--CCSCEEEEEESCSSCC-SCCCCCSTTHH---------HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHT
T ss_pred HHhh--CCCCeeEEEECCCCCC-CcchhhhHHHH---------HHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHH
Confidence 1221 2468999999975422 211 0 0111 12346889999999998654321 123455677888
Q ss_pred ccceeEeec-CCCCCCCCceEEEEEeec
Q psy13508 467 SYKQVCIFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 467 ~F~~V~i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
.|..|.++. +..+-++..-.+++|..-
T Consensus 209 ~F~~v~~~~~~vp~~~~g~w~~~~ask~ 236 (275)
T 1iy9_A 209 IFPITKLYTANIPTYPSGLWTFTIGSKK 236 (275)
T ss_dssp TCSEEEEEEECCTTSGGGCEEEEEEESS
T ss_pred hCCCeEEEEEecCcccCcceEEEEeeCC
Confidence 999988775 333444455678888653
No 177
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.90 E-value=0.0052 Score=61.44 Aligned_cols=121 Identities=10% Similarity=-0.013 Sum_probs=71.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++..+..+ + ++++|+|+.+.. +....++. ...| + ...||+.+.
T Consensus 119 ~~~~--~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~-------v~~a~~n~-~~~~~~v~~~~~d~~~~------ 179 (254)
T 2nxc_A 119 RPGD--KVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMV-------LPQAEANA-KRNGVRPRFLEGSLEAA------ 179 (254)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGG-------HHHHHHHH-HHTTCCCEEEESCHHHH------
T ss_pred CCCC--EEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHH-------HHHHHHHH-HHcCCcEEEEECChhhc------
Confidence 3454 8999999999999987763 3 399999987521 00000000 0111 1 234444321
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-c
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-Y 468 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F 468 (621)
+ ...++|+|+++... +. ....+..+..+|+|||.+++-.+... ....+...+... |
T Consensus 180 ---~----~~~~fD~Vv~n~~~--------~~------~~~~l~~~~~~LkpgG~lils~~~~~--~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 180 ---L----PFGPFDLLVANLYA--------EL------HAALAPRYREALVPGGRALLTGILKD--RAPLVREAMAGAGF 236 (254)
T ss_dssp ---G----GGCCEEEEEEECCH--------HH------HHHHHHHHHHHEEEEEEEEEEEEEGG--GHHHHHHHHHHTTC
T ss_pred ---C----cCCCCCEEEECCcH--------HH------HHHHHHHHHHHcCCCCEEEEEeeccC--CHHHHHHHHHHCCC
Confidence 1 23579999997532 10 11223356788999999999765432 355677777776 8
Q ss_pred ceeEeec
Q psy13508 469 KQVCIFK 475 (621)
Q Consensus 469 ~~V~i~K 475 (621)
+-+.+..
T Consensus 237 ~~~~~~~ 243 (254)
T 2nxc_A 237 RPLEEAA 243 (254)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 7766543
No 178
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.90 E-value=0.0063 Score=61.91 Aligned_cols=150 Identities=17% Similarity=0.131 Sum_probs=82.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCcc------ccCCC-cccccCCChhhHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFE------PYYGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~------~~~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+|||||||.|+++..++.+ +..++.++|+.+.- +...+.+ ... ..+. ....+ ...||..+
T Consensus 78 ~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~-~~l~~~~~~~~~~~v~~~~~D~~~-------- 145 (281)
T 1mjf_A 78 RVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KID-NGLLEAMLNGKHEKAKLTIGDGFE-------- 145 (281)
T ss_dssp EEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTT-TTHHHHHHTTCCSSEEEEESCHHH--------
T ss_pred eEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhc-cccccccccCCCCcEEEEECchHH--------
Confidence 7999999999999999875 56799999986420 0000001 000 0000 00011 22344321
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHH-HHHHHHhhhhccCCCcEEEEEEccCC--CCChHHHHHHHHhc
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRL-YLCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRS 467 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L-~l~~l~~al~~Lr~GG~fV~K~F~~~--~~~s~~ll~~l~~~ 467 (621)
++.. ...+|+|++|..... +.. ..| ...-+..+.++|+|||.||+-.-... ......+...++..
T Consensus 146 -~l~~---~~~fD~Ii~d~~~~~-~~~-------~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 213 (281)
T 1mjf_A 146 -FIKN---NRGFDVIIADSTDPV-GPA-------KVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV 213 (281)
T ss_dssp -HHHH---CCCEEEEEEECCCCC-------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH
T ss_pred -Hhcc---cCCeeEEEECCCCCC-Ccc-------hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 1221 457999999975322 210 011 01112245688999999999754321 11234455667778
Q ss_pred cceeEeec-CCCCCCCCceEEEEEeec
Q psy13508 468 YKQVCIFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 468 F~~V~i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
|..|..+. +..+. ...-.+++|..-
T Consensus 214 f~~v~~~~~~vP~~-~g~~~~~~as~~ 239 (281)
T 1mjf_A 214 FDRVYYYSFPVIGY-ASPWAFLVGVKG 239 (281)
T ss_dssp CSEEEEEEECCTTS-SSSEEEEEEEES
T ss_pred CCceEEEEEecCCC-CceEEEEEeeCC
Confidence 98888764 23333 445677888753
No 179
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.89 E-value=0.00099 Score=69.46 Aligned_cols=153 Identities=13% Similarity=0.073 Sum_probs=84.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||.|+++..++++ .+..++.++|+.+.- +...+.+... ...+. ...+ ...||..+ . +..
T Consensus 119 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~-~~~v~~~~~D~~~-----~----l~~- 185 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNI-SCGYE-DKRVNVFIEDASK-----F----LEN- 185 (321)
T ss_dssp EEEEEECTTCHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTT-SGGGG-STTEEEEESCHHH-----H----HHH-
T ss_pred EEEEEcCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhh-ccccC-CCcEEEEEccHHH-----H----Hhh-
Confidence 8999999999999998864 346799999987520 0000000000 00000 0011 23455432 1 111
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHhccceeEe
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRSYKQVCI 473 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~~F~~V~i 473 (621)
....+|+|++|..-.. |... .+. ..-+..+.+.|+|||.+++-.-.... .....++..++..|..|.+
T Consensus 186 -~~~~fDvIi~d~~~p~-~~~~-------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 256 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPI-GPAE-------TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 256 (321)
T ss_dssp -CCSCEEEEEEECCCSS-SGGG-------GGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred -cCCCceEEEECCcCCC-Ccch-------hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEE
Confidence 2467999999974222 2111 011 11122456899999999997644321 1234566778888998877
Q ss_pred ec-CCCCCCCCceEEEEEeec
Q psy13508 474 FK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 474 ~K-P~aSR~~ssE~YlVc~g~ 493 (621)
+. +..+-+...=.|++|..-
T Consensus 257 ~~~~vp~~~~g~w~f~~as~~ 277 (321)
T 2pt6_A 257 ANISIPTYPCGCIGILCCSKT 277 (321)
T ss_dssp EEEECTTSGGGEEEEEEEESS
T ss_pred EEEEeccccCceEEEEEeeCC
Confidence 64 333444333457788653
No 180
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.89 E-value=0.00076 Score=71.83 Aligned_cols=113 Identities=16% Similarity=0.220 Sum_probs=64.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+|||+|+|+..++.+ ..+++|+|+.+.. +....+++. ..| + ...||+.+. +....
T Consensus 212 ~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~-------~~~a~~n~~-~n~~~~~~~~~~d~~~~-----~~~~~- 274 (382)
T 1wxx_A 212 RALDVFSYAGGFALHLALG---FREVVAVDSSAEA-------LRRAEENAR-LNGLGNVRVLEANAFDL-----LRRLE- 274 (382)
T ss_dssp EEEEETCTTTHHHHHHHHH---EEEEEEEESCHHH-------HHHHHHHHH-HTTCTTEEEEESCHHHH-----HHHHH-
T ss_pred eEEEeeeccCHHHHHHHHh---CCEEEEEECCHHH-------HHHHHHHHH-HcCCCCceEEECCHHHH-----HHHHH-
Confidence 8999999999999999876 4789999987520 000000000 011 1 345665431 11111
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+ .+..+|+|++|-..-........+. ......-+..+..+|+|||.+++-....
T Consensus 275 ~--~~~~fD~Ii~dpP~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 275 K--EGERFDLVVLDPPAFAKGKKDVERA--YRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp H--TTCCEEEEEECCCCSCCSTTSHHHH--HHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred h--cCCCeeEEEECCCCCCCChhHHHHH--HHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 2568999999953211111111111 1222233446889999999999988765
No 181
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.89 E-value=0.0034 Score=63.27 Aligned_cols=99 Identities=13% Similarity=0.021 Sum_probs=61.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++.++..+ ..+++|+|+.+.. +....... ...| + ...+|+.+..
T Consensus 123 ~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~-------~~~a~~~~-~~~~~~~~~~~~d~~~~~----------- 180 (286)
T 3m70_A 123 KVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENS-------IAFLNETK-EKENLNISTALYDINAAN----------- 180 (286)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEESCHHH-------HHHHHHHH-HHTTCCEEEEECCGGGCC-----------
T ss_pred cEEEECCCCCHHHHHHHHC---CCeEEEEECCHHH-------HHHHHHHH-HHcCCceEEEEecccccc-----------
Confidence 8999999999999999875 4689999987420 00000000 0111 2 3466766422
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
....+|+|+|.+.......+.... .+..+.++|+|||.+++=.+
T Consensus 181 --~~~~fD~i~~~~~~~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 181 --IQENYDFIVSTVVFMFLNRERVPS---------IIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp --CCSCEEEEEECSSGGGSCGGGHHH---------HHHHHHHTEEEEEEEEEEEE
T ss_pred --ccCCccEEEEccchhhCCHHHHHH---------HHHHHHHhcCCCcEEEEEEe
Confidence 146799999998664332222221 22345688999999887543
No 182
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.88 E-value=0.0023 Score=64.79 Aligned_cols=132 Identities=7% Similarity=-0.101 Sum_probs=77.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----c--CCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----Y--YGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~--~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||+|||.|+.+..++.+ . .++.++|+.+. +.....+.+.. . ..+ ...||..+.
T Consensus 75 ~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~-------~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~-------- 136 (262)
T 2cmg_A 75 EVLIVDGFDLELAHQLFKY--D-THIDFVQADEK-------ILDSFISFFPHFHEVKNNKNFTHAKQLLDLD-------- 136 (262)
T ss_dssp EEEEESSCCHHHHHHHTTS--S-CEEEEECSCHH-------HHGGGTTTSTTHHHHHTCTTEEEESSGGGSC--------
T ss_pred EEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHH-------HHHHHHHHHHhhccccCCCeEEEEechHHHH--------
Confidence 8999999999999988876 4 89999998642 11110111100 0 001 123444321
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC--ChHHHHHHHHhccc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP--FSAGLLYLLYRSYK 469 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~--~s~~ll~~l~~~F~ 469 (621)
- ..+|+|++|... . . . -+..+.+.|+|||.||+..-..... ....+...++..|.
T Consensus 137 ------~-~~fD~Ii~d~~d-p----~--~---------~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 193 (262)
T 2cmg_A 137 ------I-KKYDLIFCLQEP-D----I--H---------RIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFS 193 (262)
T ss_dssp ------C-CCEEEEEESSCC-C----H--H---------HHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCS
T ss_pred ------H-hhCCEEEECCCC-h----H--H---------HHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCC
Confidence 1 469999999531 1 1 1 2235678899999999976442211 12344566778899
Q ss_pred eeEeecC-CCCCCCCceEEEEEeec
Q psy13508 470 QVCIFKP-NTSRPANSERYIVCKWK 493 (621)
Q Consensus 470 ~V~i~KP-~aSR~~ssE~YlVc~g~ 493 (621)
.+..+.- ..+ ..--.|++|..-
T Consensus 194 ~~~~~~~~vP~--~g~~~~~~as~~ 216 (262)
T 2cmg_A 194 VAMPFVAPLRI--LSNKGYIYASFK 216 (262)
T ss_dssp EEEEECCTTCT--TCCEEEEEEESS
T ss_pred ceEEEEEccCC--CcccEEEEeeCC
Confidence 8877642 233 333457777654
No 183
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.83 E-value=0.0033 Score=61.44 Aligned_cols=98 Identities=11% Similarity=0.029 Sum_probs=59.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|.++.++..+. +.++++|+|+.+.. .....+.+. ..| + ...||+.+. ... .
T Consensus 57 ~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~~v~~~~~d~~~~--~~~----~ 121 (233)
T 2gpy_A 57 RILEIGTAIGYSAIRMAQAL-PEATIVSIERDERR-------YEEAHKHVK-ALGLESRIELLFGDALQL--GEK----L 121 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHH-------HHHHHHHHH-HTTCTTTEEEECSCGGGS--HHH----H
T ss_pred EEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEECCHHHH--HHh----c
Confidence 89999999999999998765 36899999986420 000000000 011 1 345666542 111 1
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
.....+|+|++|.... +. ...+..+..+|+|||.+|+-
T Consensus 122 ---~~~~~fD~I~~~~~~~-----~~---------~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 122 ---ELYPLFDVLFIDAAKG-----QY---------RRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ---TTSCCEEEEEEEGGGS-----CH---------HHHHHHHGGGEEEEEEEEEE
T ss_pred ---ccCCCccEEEECCCHH-----HH---------HHHHHHHHHHcCCCeEEEEE
Confidence 1135799999998642 11 11233467899999999985
No 184
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.83 E-value=0.0016 Score=66.71 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=65.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+..+.++++|+|+.+.. +....+.+ ...| + ...||+.+..
T Consensus 117 ~~~~--~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~~~--- 183 (305)
T 3ocj_A 117 RPGC--VVASVPCGWMSELLALDYSACPGVQLVGIDYDPEA-------LDGATRLA-AGHALAGQITLHRQDAWKLD--- 183 (305)
T ss_dssp CTTC--EEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHH-------HHHHHHHH-TTSTTGGGEEEEECCGGGCC---
T ss_pred CCCC--EEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHH-------HHHHHHHH-HhcCCCCceEEEECchhcCC---
Confidence 4555 89999999999999885445567899999986420 00000000 0111 1 3467776521
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+ ...+|+|++.+......+... ...-+..+.++|+|||.+++-.+.
T Consensus 184 ---------~-~~~fD~v~~~~~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 ---------T-REGYDLLTSNGLNIYEPDDAR--------VTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ---------C-CSCEEEEECCSSGGGCCCHHH--------HHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ---------c-cCCeEEEEECChhhhcCCHHH--------HHHHHHHHHHhcCCCeEEEEEecC
Confidence 1 368999999775543222211 111233567889999999996654
No 185
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=96.82 E-value=0.0033 Score=65.70 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=61.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC-CC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY-GV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~-Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++..++.+. +..+++++|+...-. .... .. .... .+ ...||++++
T Consensus 187 ~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~---~~~~----~~-~~~~~~v~~~~~d~~~~------------- 244 (348)
T 3lst_A 187 TVADVGGGRGGFLLTVLREH-PGLQGVLLDRAEVVA---RHRL----DA-PDVAGRWKVVEGDFLRE------------- 244 (348)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTEEEEEEECHHHHT---TCCC----CC-GGGTTSEEEEECCTTTC-------------
T ss_pred eEEEECCccCHHHHHHHHHC-CCCEEEEecCHHHhh---cccc----cc-cCCCCCeEEEecCCCCC-------------
Confidence 89999999999999998754 577899999853211 0000 00 0111 12 467888732
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.+ .+|+|++-.....-.++.. ...+.-+.+.|||||.+++--+.
T Consensus 245 -~p-~~D~v~~~~vlh~~~d~~~---------~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 245 -VP-HADVHVLKRILHNWGDEDS---------VRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp -CC-CCSEEEEESCGGGSCHHHH---------HHHHHHHHHTCCTTCEEEEEECC
T ss_pred -CC-CCcEEEEehhccCCCHHHH---------HHHHHHHHHhcCCCCEEEEEEec
Confidence 13 7999998665432211111 12233466789999999886543
No 186
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=96.81 E-value=0.004 Score=60.46 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=60.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC-CC-cccccCCChhhHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY-GV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~-Gv-~~~GDI~~~~~~~~l~ 390 (621)
+++. +|||+|||+|.++..+..+. .+++|+|+.+.. .....+.+ ... .+ ...||+.+.-
T Consensus 69 ~~~~--~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~-------~~~a~~~~-~~~~~v~~~~~d~~~~~------ 129 (231)
T 1vbf_A 69 HKGQ--KVLEIGTGIGYYTALIAEIV---DKVVSVEINEKM-------YNYASKLL-SYYNNIKLILGDGTLGY------ 129 (231)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHS---SEEEEEESCHHH-------HHHHHHHH-TTCSSEEEEESCGGGCC------
T ss_pred CCCC--EEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHH-------HHHHHHHH-hhcCCeEEEECCccccc------
Confidence 4455 89999999999999988752 799999986420 00000000 000 12 3456665411
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++++....-. + .+..+|+|||.+|+-+-.
T Consensus 130 ------~~~~~fD~v~~~~~~~~~~----~-------------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 130 ------EEEKPYDRVVVWATAPTLL----C-------------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ------GGGCCEEEEEESSBBSSCC----H-------------HHHHTEEEEEEEEEEECS
T ss_pred ------ccCCCccEEEECCcHHHHH----H-------------HHHHHcCCCcEEEEEEcC
Confidence 0135799999998764321 1 245689999999998754
No 187
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.80 E-value=0.0041 Score=64.48 Aligned_cols=147 Identities=11% Similarity=0.051 Sum_probs=83.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc-----c--CCC-cccccCCChhhHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP-----Y--YGV-KGNGDVYDPENILSLH 390 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-----~--~Gv-~~~GDI~~~~~~~~l~ 390 (621)
+|||||||.|+++.+++++ .+..++.++|+.+. ++....+.+.. . ..+ ...||..+ .
T Consensus 80 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~-------~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~-----~-- 144 (314)
T 1uir_A 80 RVLIVGGGEGATLREVLKH-PTVEKAVMVDIDGE-------LVEVAKRHMPEWHQGAFDDPRAVLVIDDARA-----Y-- 144 (314)
T ss_dssp EEEEEECTTSHHHHHHTTS-TTCCEEEEEESCHH-------HHHHHHHHCHHHHTTGGGCTTEEEEESCHHH-----H--
T ss_pred eEEEEcCCcCHHHHHHHhc-CCCCEEEEEECCHH-------HHHHHHHHhHhhccccccCCceEEEEchHHH-----H--
Confidence 8999999999999999874 24579999998742 00000000100 0 011 23455432 1
Q ss_pred HHHHhhcCCCcccEEEecCCCCCC--CchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCC---CCChHHHHHHH
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVE--GQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF---TPFSAGLLYLL 464 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~--G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~---~~~s~~ll~~l 464 (621)
+.. ....+|+|++|...... +. . ..|. ..-+..+.++|+|||.||+-..... ......++..+
T Consensus 145 --l~~--~~~~fD~Ii~d~~~~~~~~~~-~------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l 213 (314)
T 1uir_A 145 --LER--TEERYDVVIIDLTDPVGEDNP-A------RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTV 213 (314)
T ss_dssp --HHH--CCCCEEEEEEECCCCBSTTCG-G------GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHH
T ss_pred --HHh--cCCCccEEEECCCCcccccCc-c------hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHH
Confidence 111 25689999999754330 21 1 1111 1122356789999999999764321 12345667778
Q ss_pred HhccceeEeecC-CCCCCCCceEEEEEee
Q psy13508 465 YRSYKQVCIFKP-NTSRPANSERYIVCKW 492 (621)
Q Consensus 465 ~~~F~~V~i~KP-~aSR~~ssE~YlVc~g 492 (621)
+..|..|.++.- ..+. ...-.+++|..
T Consensus 214 ~~~F~~v~~~~~~vP~~-~g~~~~~~as~ 241 (314)
T 1uir_A 214 REAFRYVRSYKNHIPGF-FLNFGFLLASD 241 (314)
T ss_dssp HTTCSEEEEEEEEEGGG-TEEEEEEEEES
T ss_pred HHHCCceEEEEEecCCC-CCeEEEEEEEC
Confidence 999998876642 2222 23345677764
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.79 E-value=0.0046 Score=59.36 Aligned_cols=33 Identities=9% Similarity=-0.077 Sum_probs=28.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++||+|||+|.++.+++.+....++++|+|+.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~ 91 (210)
T 3c3p_A 59 LVVVPGDGLGCASWWFARAISISSRVVMIDPDR 91 (210)
T ss_dssp EEEEESCGGGHHHHHHHTTSCTTCEEEEEESCH
T ss_pred EEEEEcCCccHHHHHHHHhCCCCCEEEEEECCH
Confidence 799999999999999988654468999999864
No 189
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.77 E-value=0.0012 Score=70.65 Aligned_cols=128 Identities=10% Similarity=0.016 Sum_probs=67.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccC--CC-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYY--GV-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~--Gv-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||+|||+|+|+-+++.+ ...+++|+|+.+.. +....++.. ... .+ ...||+.+ .+...
T Consensus 215 ~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~a-------l~~A~~N~~~n~~~~~~v~~~~~D~~~-----~l~~~- 279 (385)
T 2b78_A 215 TVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRS-------RALSLAHFEANHLDMANHQLVVMDVFD-----YFKYA- 279 (385)
T ss_dssp EEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTH-------HHHHHHHHHHTTCCCTTEEEEESCHHH-----HHHHH-
T ss_pred eEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHH-------HHHHHHHHHHcCCCccceEEEECCHHH-----HHHHH-
Confidence 8999999999999999864 23589999998631 000000000 000 11 34566553 11111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHH-HHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 467 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~-l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~ 467 (621)
.+ .+..+|+|++|-.....+.....+. .. .+.+ +..+..+|+|||.+++-.....- ....+...+...
T Consensus 280 ~~--~~~~fD~Ii~DPP~~~~~~~~~~~~--~~-~~~~ll~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~i~~~ 348 (385)
T 2b78_A 280 RR--HHLTYDIIIIDPPSFARNKKEVFSV--SK-DYHKLIRQGLEILSENGLIIASTNAANM-TVSQFKKQIEKG 348 (385)
T ss_dssp HH--TTCCEEEEEECCCCC-----CCCCH--HH-HHHHHHHHHHHTEEEEEEEEEEECCTTS-CHHHHHHHHHHH
T ss_pred HH--hCCCccEEEECCCCCCCChhhHHHH--HH-HHHHHHHHHHHhcCCCcEEEEEeCCCcC-CHHHHHHHHHHH
Confidence 11 2458999999952211110111110 01 1222 23578999999999988765422 223444555443
No 190
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.77 E-value=0.00035 Score=68.09 Aligned_cols=98 Identities=6% Similarity=-0.048 Sum_probs=61.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.|+.++..+ ..+++|+|+.+. ++....+.... ++ ...||+.+. .
T Consensus 45 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~~~~a~~~~~~--~v~~~~~d~~~~-------------~ 99 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEH---FNDITCVEASEE-------AISHAQGRLKD--GITYIHSRFEDA-------------Q 99 (250)
T ss_dssp CEEEESCTTSHHHHHHTTT---CSCEEEEESCHH-------HHHHHHHHSCS--CEEEEESCGGGC-------------C
T ss_pred cEEEECCCCCHHHHHHHHh---CCcEEEEeCCHH-------HHHHHHHhhhC--CeEEEEccHHHc-------------C
Confidence 7999999999999988764 247999998742 00000000000 22 345676542 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhh-hccCCCcEEEEEEccC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSL-FIVRPEGHFVCKVFDM 452 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al-~~Lr~GG~fV~K~F~~ 452 (621)
....+|+|+|-....... +.+ ..+..+. ++|+|||.+++-....
T Consensus 100 ~~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLEHID--DPV---------ALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp CSSCEEEEEEESCGGGCS--SHH---------HHHHHHHHTTEEEEEEEEEEEECT
T ss_pred cCCcccEEEEhhHHHhhc--CHH---------HHHHHHHHHhcCCCCEEEEEcCCh
Confidence 246799999987653322 111 1222456 8999999999988764
No 191
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.77 E-value=0.0026 Score=64.34 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=65.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--cc-CCC-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PY-YGV-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~-~Gv-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+|||+|.++.++..+. .++++|+|+.+.. .....+... .. ..+ ...||+.+..
T Consensus 81 ~~~~--~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~-------~~~a~~~~~~~~~~~~~~~~~~d~~~~~---- 145 (297)
T 2o57_A 81 QRQA--KGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQ-------NKRNEEYNNQAGLADNITVKYGSFLEIP---- 145 (297)
T ss_dssp CTTC--EEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHH-------HHHHHHHHHHHTCTTTEEEEECCTTSCS----
T ss_pred CCCC--EEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHH-------HHHHHHHHHhcCCCcceEEEEcCcccCC----
Confidence 4455 89999999999999998865 3689999987420 000000000 00 011 3467776532
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+....+|+|++-+....-.+ .. ..+..+.++|||||.+++-.+.
T Consensus 146 --------~~~~~fD~v~~~~~l~~~~~--~~---------~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 146 --------CEDNSYDFIWSQDAFLHSPD--KL---------KVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp --------SCTTCEEEEEEESCGGGCSC--HH---------HHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------CCCCCEeEEEecchhhhcCC--HH---------HHHHHHHHHcCCCeEEEEEEec
Confidence 13467999999876544322 11 1223456889999999998765
No 192
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.77 E-value=0.0037 Score=60.88 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=62.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCC-----CCeEEEEecCCCCCCCCCcccCCCCCCccc-------cCCC-ccccc
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKW-----RAKGIGFTLTGSHDFKLDDFFAGPSETFEP-------YYGV-KGNGD 379 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~-----~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-------~~Gv-~~~GD 379 (621)
+++. +|||+|||+|.++..+..+.+. .++++|+|+.+. +.....+.+.. ...+ ...||
T Consensus 83 ~~~~--~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~-------~~~~a~~~~~~~~~~~~~~~~v~~~~~d 153 (227)
T 1r18_A 83 KPGA--RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAE-------LVRRSKANLNTDDRSMLDSGQLLIVEGD 153 (227)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHH-------HHHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred CCCC--EEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHH-------HHHHHHHHHHhcCccccCCCceEEEECC
Confidence 5565 8999999999999998876542 369999998642 00000000000 0012 24556
Q ss_pred CCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 380 I~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.+.- .....+|+|+++++....- ..+...|+|||.+|+-+..
T Consensus 154 ~~~~~------------~~~~~fD~I~~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 154 GRKGY------------PPNAPYNAIHVGAAAPDTP-----------------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGGCC------------GGGCSEEEEEECSCBSSCC-----------------HHHHHTEEEEEEEEEEESC
T ss_pred cccCC------------CcCCCccEEEECCchHHHH-----------------HHHHHHhcCCCEEEEEEec
Confidence 55310 0125799999998764211 1246789999999999876
No 193
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.76 E-value=0.00084 Score=64.32 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=60.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++..+ + ..+++|+|+.+. +.....+.. .++ ...+|+.+.. +
T Consensus 39 ~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~-------~~~~a~~~~---~~~~~~~~d~~~~~------------~ 91 (211)
T 2gs9_A 39 SLLEVGAGTGYWLRRL----P-YPQKVGVEPSEA-------MLAVGRRRA---PEATWVRAWGEALP------------F 91 (211)
T ss_dssp EEEEETCTTCHHHHHC----C-CSEEEEECCCHH-------HHHHHHHHC---TTSEEECCCTTSCC------------S
T ss_pred eEEEECCCCCHhHHhC----C-CCeEEEEeCCHH-------HHHHHHHhC---CCcEEEEcccccCC------------C
Confidence 8999999999999877 1 238999998642 000000000 122 3466776522 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 453 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~ 453 (621)
....+|+|++........ +.. ..+..+.++|+|||.+++-.+...
T Consensus 92 ~~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 92 PGESFDVVLLFTTLEFVE--DVE---------RVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CSSCEEEEEEESCTTTCS--CHH---------HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCcEEEEEEcChhhhcC--CHH---------HHHHHHHHHcCCCCEEEEEecCCc
Confidence 346799999987654332 221 122345688999999999998753
No 194
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.75 E-value=0.0011 Score=64.50 Aligned_cols=110 Identities=15% Similarity=0.030 Sum_probs=62.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
.+||+|||+|.++..+..+. +..+++|+|+.+.. +....+... ....+ ...||+.+. ...
T Consensus 41 ~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~-------l~~a~~~~~~~~~~nv~~~~~d~~~l------~~~--- 103 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSV-------IVTAVQKVKDSEAQNVKLLNIDADTL------TDV--- 103 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHH-------HHHHHHHHHHSCCSSEEEECCCGGGH------HHH---
T ss_pred eEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHH-------HHHHHHHHHHcCCCCEEEEeCCHHHH------Hhh---
Confidence 79999999999999988753 57899999987420 000000000 00112 356777651 111
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHH-HHHhhhhccCCCcEEEEEEc
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLC-QFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~-~l~~al~~Lr~GG~fV~K~F 450 (621)
+....+|.|++........... +. .++... -+..+..+|+|||.|++.+-
T Consensus 104 -~~~~~~d~v~~~~~~p~~~~~~--~~--~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 104 -FEPGEVKRVYLNFSDPWPKKRH--EK--RRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp -CCTTSCCEEEEESCCCCCSGGG--GG--GSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred -cCcCCcCEEEEECCCCCcCccc--cc--cccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 2345799998765322211111 00 112112 23356788999999999873
No 195
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.75 E-value=0.00056 Score=67.42 Aligned_cols=33 Identities=9% Similarity=-0.126 Sum_probs=29.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++.+++.+....++++|+|+.+
T Consensus 63 ~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~ 95 (239)
T 2hnk_A 63 RIIEIGTFTGYSSLCFASALPEDGKILCCDVSE 95 (239)
T ss_dssp EEEEECCTTCHHHHHHHHHSCTTCEEEEEESCH
T ss_pred EEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCH
Confidence 899999999999999998765568999999864
No 196
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.74 E-value=0.0017 Score=66.63 Aligned_cols=103 Identities=16% Similarity=0.092 Sum_probs=65.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC----C-cccccCCChhhHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG----V-KGNGDVYDPENIL 387 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G----v-~~~GDI~~~~~~~ 387 (621)
+++. +|||+|||+|.++.++..+. .++++|+|+.+.. .....+.. ...| + ...||+.+..
T Consensus 116 ~~~~--~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~-------~~~a~~~~-~~~~~~~~v~~~~~d~~~~~--- 180 (312)
T 3vc1_A 116 GPDD--TLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQ-------ADFGNRRA-RELRIDDHVRSRVCNMLDTP--- 180 (312)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHH-------HHHHHHHH-HHTTCTTTEEEEECCTTSCC---
T ss_pred CCCC--EEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHH-------HHHHHHHH-HHcCCCCceEEEECChhcCC---
Confidence 4555 89999999999999998864 4789999987420 00000000 0011 2 4567877532
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+....+|+|++-......+ . ...+..+.++|+|||.+++-.+.
T Consensus 181 ---------~~~~~fD~V~~~~~l~~~~---~---------~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 181 ---------FDKGAVTASWNNESTMYVD---L---------HDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp ---------CCTTCEEEEEEESCGGGSC---H---------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------CCCCCEeEEEECCchhhCC---H---------HHHHHHHHHHcCCCcEEEEEEcc
Confidence 1346899999976554332 1 11223467889999999987765
No 197
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.73 E-value=0.00072 Score=65.97 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=60.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+ + ..+++|+|+.+.. +....+... ..++ ...+|+.+.. .
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~~~~~d~~~~~------------~ 103 (243)
T 3bkw_A 46 RIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKM-------LARARAAGP-DTGITYERADLDKLH------------L 103 (243)
T ss_dssp EEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHH-------HHHHHHTSC-SSSEEEEECCGGGCC------------C
T ss_pred EEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHH-------HHHHHHhcc-cCCceEEEcChhhcc------------C
Confidence 8999999999999998875 2 2489999986420 000000000 0112 3456665421 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|++....... ++.. ..+..+.++|+|||.+|+-+..
T Consensus 104 ~~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYV--EDVA---------RLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CTTCEEEEEEESCGGGC--SCHH---------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCceEEEEecccccc--chHH---------HHHHHHHHhcCcCcEEEEEeCC
Confidence 24689999998754322 1111 1223456789999999998764
No 198
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.72 E-value=0.0017 Score=62.31 Aligned_cols=99 Identities=7% Similarity=0.010 Sum_probs=62.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhcC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTK 398 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~~ 398 (621)
++||+|||+|.++.++..+ ..+++|+|+.+.. .....+.. .-...+|+.+... ...
T Consensus 35 ~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~-------~~~~~~~~----~~~~~~d~~~~~~----------~~~ 90 (230)
T 3cc8_A 35 EVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEA-------AEQAKEKL----DHVVLGDIETMDM----------PYE 90 (230)
T ss_dssp EEEEETCTTSHHHHHHHTT---TCEEEEEESSHHH-------HHHHHTTS----SEEEESCTTTCCC----------CSC
T ss_pred cEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHH-------HHHHHHhC----CcEEEcchhhcCC----------CCC
Confidence 8999999999999999876 3899999986420 00000000 0134567664210 012
Q ss_pred CCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 399 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 399 ~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|++........ +.. ..+..+.++|+|||.+++-+...
T Consensus 91 ~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLF--DPW---------AVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp TTCEEEEEEESCGGGSS--CHH---------HHHHHTGGGEEEEEEEEEEEECT
T ss_pred CCccCEEEECChhhhcC--CHH---------HHHHHHHHHcCCCCEEEEEeCCc
Confidence 46799999976543321 111 22335678999999999988664
No 199
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.69 E-value=0.0038 Score=65.29 Aligned_cols=135 Identities=12% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--cc-CCC-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PY-YGV-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~-~Gv-~~~GDI~~~~~~~~ 388 (621)
.+|. +|||+|||.|+|+.+ +. ..++++|+|+.+.. +....+++. .. ..+ ...||+.+..
T Consensus 194 ~~~~--~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~a-------i~~a~~n~~~n~l~~~v~~~~~D~~~~~---- 256 (336)
T 2yx1_A 194 SLND--VVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHA-------IELLKKNIKLNKLEHKIIPILSDVREVD---- 256 (336)
T ss_dssp CTTC--EEEETTCTTSHHHHH-TT---TSSEEEEEESCHHH-------HHHHHHHHHHTTCTTTEEEEESCGGGCC----
T ss_pred CCCC--EEEEccCccCHHHHh-cc---CCCEEEEEECCHHH-------HHHHHHHHHHcCCCCcEEEEECChHHhc----
Confidence 3455 899999999999998 65 36799999997520 000000000 00 011 3456665421
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 468 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F 468 (621)
..+|+|++|.... +. .-+..+..+|+|||.+++-.+... ...+...+...+
T Consensus 257 -----------~~fD~Vi~dpP~~--~~-------------~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~~~~ 307 (336)
T 2yx1_A 257 -----------VKGNRVIMNLPKF--AH-------------KFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFEKKC 307 (336)
T ss_dssp -----------CCEEEEEECCTTT--GG-------------GGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHHHHS
T ss_pred -----------CCCcEEEECCcHh--HH-------------HHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHHHhc
Confidence 4799999985221 11 112246778999999999888753 345666666553
Q ss_pred ceeEeecCCCCCCCCceEEEEEeecC
Q psy13508 469 KQVCIFKPNTSRPANSERYIVCKWKR 494 (621)
Q Consensus 469 ~~V~i~KP~aSR~~ssE~YlVc~g~~ 494 (621)
.+.+..-...|.-+...|.+|..++
T Consensus 308 -~~~i~~~~~v~~~~p~~~~~~~~~~ 332 (336)
T 2yx1_A 308 -DCEVLEKRIVKSYAPREYILALDFK 332 (336)
T ss_dssp -EEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred -CCcEEEEEEEeccCCCCCEEEEEEE
Confidence 2222222222222333566666553
No 200
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.69 E-value=0.0075 Score=62.26 Aligned_cols=148 Identities=11% Similarity=0.195 Sum_probs=81.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----c--CCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----Y--YGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~--~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||.|+++..++++ .+..++.++|+.+. ++....+.+.. . ..+ ...||..+
T Consensus 98 ~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~-------~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~--------- 160 (304)
T 2o07_A 98 KVLIIGGGDGGVLREVVKH-PSVESVVQCEIDED-------VIQVSKKFLPGMAIGYSSSKLTLHVGDGFE--------- 160 (304)
T ss_dssp EEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHH-------HHHHHHHHCHHHHGGGGCTTEEEEESCHHH---------
T ss_pred EEEEECCCchHHHHHHHHc-CCCCEEEEEECCHH-------HHHHHHHHhHHhhcccCCCcEEEEECcHHH---------
Confidence 8999999999999999864 34579999998642 00000000000 0 011 22344321
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHH-HHhhhhccCCCcEEEEEEccCCC--CChHHHHHHHHhcc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRSY 468 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~-l~~al~~Lr~GG~fV~K~F~~~~--~~s~~ll~~l~~~F 468 (621)
++.. ....+|+|++|..... +.. + .+...+ +..+.++|+|||.||+-....+. .....+...++..|
T Consensus 161 ~l~~--~~~~fD~Ii~d~~~~~-~~~---~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f 230 (304)
T 2o07_A 161 FMKQ--NQDAFDVIITDSSDPM-GPA---E----SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLF 230 (304)
T ss_dssp HHHT--CSSCEEEEEEECC-------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHC
T ss_pred HHhh--CCCCceEEEECCCCCC-Ccc---h----hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhC
Confidence 1211 2467999999974322 110 0 111111 22456899999999997744321 12345566788899
Q ss_pred ceeEeec-CCCCCCCCceEEEEEeec
Q psy13508 469 KQVCIFK-PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 469 ~~V~i~K-P~aSR~~ssE~YlVc~g~ 493 (621)
..+.++. ...+.++..--|++|...
T Consensus 231 ~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 231 PVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp SEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CCceeEEEEeccccCcceEEEEEeCC
Confidence 9887763 233333333357888643
No 201
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.68 E-value=0.00088 Score=70.49 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=58.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||+|.++..+..+ ...+++|+|+.+.-.......... ...+ + ...||+.+..
T Consensus 69 ~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~~l~~a~~~~~~~------~~~~~v~~~~~d~~~~~------------ 128 (349)
T 3q7e_A 69 VVLDVGSGTGILCMFAAKA--GARKVIGIECSSISDYAVKIVKAN------KLDHVVTIIKGKVEEVE------------ 128 (349)
T ss_dssp EEEEESCTTSHHHHHHHHT--TCSEEEEEECSTHHHHHHHHHHHT------TCTTTEEEEESCTTTCC------------
T ss_pred EEEEEeccchHHHHHHHHC--CCCEEEEECcHHHHHHHHHHHHHc------CCCCcEEEEECcHHHcc------------
Confidence 8999999999999999875 456999999973100000000000 0011 2 4577887632
Q ss_pred cCCCcccEEEecCCCCCC-CchhhHHHHHHHHHHHHHHhhhhccCCCcEEE
Q psy13508 397 TKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~-G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
....++|+|+|+.....- .....+ ..+..+.++|+|||.++
T Consensus 129 ~~~~~fD~Iis~~~~~~l~~~~~~~---------~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 129 LPVEKVDIIISEWMGYCLFYESMLN---------TVLHARDKWLAPDGLIF 170 (349)
T ss_dssp CSSSCEEEEEECCCBBTBTBTCCHH---------HHHHHHHHHEEEEEEEE
T ss_pred CCCCceEEEEEccccccccCchhHH---------HHHHHHHHhCCCCCEEc
Confidence 124689999998532222 111111 11223458899999987
No 202
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.66 E-value=0.002 Score=67.74 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=59.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||.|.++..+..+ ..++++|+|+.+.-......+...... ..+ ...||+.+..
T Consensus 53 ~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~~~~~a~~~~~~~~l~-----~~v~~~~~d~~~~~------------- 112 (348)
T 2y1w_A 53 IVLDVGCGSGILSFFAAQA--GARKIYAVEASTMAQHAEVLVKSNNLT-----DRIVVIPGKVEEVS------------- 112 (348)
T ss_dssp EEEEETCTTSHHHHHHHHT--TCSEEEEEECSTHHHHHHHHHHHTTCT-----TTEEEEESCTTTCC-------------
T ss_pred EEEEcCCCccHHHHHHHhC--CCCEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcchhhCC-------------
Confidence 8999999999999988874 346999999874110000000000000 012 3567776531
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
.+.++|+|+|.+....-..+.. +..+..+.++|+|||.+++=.
T Consensus 113 ~~~~~D~Ivs~~~~~~~~~~~~---------~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLFNERM---------LESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CSSCEEEEEECCCBTTBTTTSH---------HHHHHHGGGGEEEEEEEESCE
T ss_pred CCCceeEEEEeCchhcCChHHH---------HHHHHHHHhhcCCCeEEEEec
Confidence 1357999999965433222222 112234668999999998443
No 203
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.65 E-value=0.0054 Score=60.17 Aligned_cols=105 Identities=11% Similarity=0.023 Sum_probs=63.5
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l 389 (621)
+++. +|||+|||+|.++..+..+ .++++|+|+.+. +.....+... ....+ ...||+.+..
T Consensus 20 ~~~~--~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~-------~~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 82 (239)
T 1xxl_A 20 RAEH--RVLDIGAGAGHTALAFSPY---VQECIGVDATKE-------MVEVASSFAQEKGVENVRFQQGTAESLP----- 82 (239)
T ss_dssp CTTC--EEEEESCTTSHHHHHHGGG---SSEEEEEESCHH-------HHHHHHHHHHHHTCCSEEEEECBTTBCC-----
T ss_pred CCCC--EEEEEccCcCHHHHHHHHh---CCEEEEEECCHH-------HHHHHHHHHHHcCCCCeEEEecccccCC-----
Confidence 4555 8999999999999988765 258999998642 0000000000 00112 3466775421
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|+|......-. +.. ..+..+.++|+|||.+++-.+..
T Consensus 83 -------~~~~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 -------FPDDSFDIITCRYAAHHFS--DVR---------KAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -------SCTTCEEEEEEESCGGGCS--CHH---------HHHHHHHHHEEEEEEEEEEEECB
T ss_pred -------CCCCcEEEEEECCchhhcc--CHH---------HHHHHHHHHcCCCcEEEEEEcCC
Confidence 1346899999987553321 111 12334568899999999977654
No 204
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=96.64 E-value=0.0029 Score=67.63 Aligned_cols=103 Identities=14% Similarity=0.219 Sum_probs=61.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~ 392 (621)
+++. +|||+|||+|.|+.++..+ ..+++|+|+.+. +... ..-.|+...-+++.....+.+.
T Consensus 106 ~~~~--~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~-------~~~~-----a~~~~~~~~~~~~~~~~~~~l~-- 166 (416)
T 4e2x_A 106 GPDP--FIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSG-------VAAK-----AREKGIRVRTDFFEKATADDVR-- 166 (416)
T ss_dssp SSSC--EEEEETCTTTTTHHHHHHT---TCEEEEECCCHH-------HHHH-----HHTTTCCEECSCCSHHHHHHHH--
T ss_pred CCCC--EEEEecCCCCHHHHHHHHc---CCcEEEECCCHH-------HHHH-----HHHcCCCcceeeechhhHhhcc--
Confidence 4454 8999999999999999874 358999998742 1000 0001222222333333333322
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+....+|+|+|-.....-. +.. ..+..+.++|+|||.|++-+
T Consensus 167 ----~~~~~fD~I~~~~vl~h~~--d~~---------~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 167 ----RTEGPANVIYAANTLCHIP--YVQ---------SVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp ----HHHCCEEEEEEESCGGGCT--THH---------HHHHHHHHHEEEEEEEEEEE
T ss_pred ----cCCCCEEEEEECChHHhcC--CHH---------HHHHHHHHHcCCCeEEEEEe
Confidence 1246899999987654332 221 12234567899999999864
No 205
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.62 E-value=0.0053 Score=64.78 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=60.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++..++.+. +..+++++|+ +. +.....+ ..++ ...||++++ .
T Consensus 212 ~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~-------~~~~a~~----~~~v~~~~~d~~~~-------------~ 265 (372)
T 1fp1_D 212 TLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQ-------VIENAPP----LSGIEHVGGDMFAS-------------V 265 (372)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HH-------HHTTCCC----CTTEEEEECCTTTC-------------C
T ss_pred EEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HH-------HHHhhhh----cCCCEEEeCCcccC-------------C
Confidence 89999999999999998764 5789999998 31 1111000 1233 457888762 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+. +|+|++-.....-.++. ....+.-+.+.|+|||.+++--+.
T Consensus 266 -~~-~D~v~~~~~lh~~~d~~---------~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 266 -PQ-GDAMILKAVCHNWSDEK---------CIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp -CC-EEEEEEESSGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CC-CCEEEEecccccCCHHH---------HHHHHHHHHHhcCCCCEEEEEEec
Confidence 22 89999865443211111 112233456789999999987543
No 206
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.61 E-value=0.0017 Score=64.06 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=25.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|.++.++..+ +. .+++|+|+.+
T Consensus 59 ~vLDlGcG~G~~~~~l~~~-~~-~~v~gvD~s~ 89 (265)
T 2i62_A 59 LLIDIGSGPTIYQLLSACE-SF-TEIIVSDYTD 89 (265)
T ss_dssp EEEEESCTTCCGGGTTGGG-TE-EEEEEEESCH
T ss_pred EEEEECCCccHHHHHHhhc-cc-CeEEEecCCH
Confidence 8999999999999887653 22 5899999875
No 207
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.61 E-value=0.0013 Score=65.74 Aligned_cols=93 Identities=10% Similarity=0.025 Sum_probs=60.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..+..+. +.++++|+|+.+. +.....+. ...+ ...+|+.+.. +
T Consensus 88 ~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------~ 144 (269)
T 1p91_A 88 AVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKV-------AIKAAAKR---YPQVTFCVASSHRLP------------F 144 (269)
T ss_dssp EEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHH-------HHHHHHHH---CTTSEEEECCTTSCS------------B
T ss_pred EEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHH-------HHHHHHHh---CCCcEEEEcchhhCC------------C
Confidence 89999999999999988754 3579999998642 00000000 0011 3456665421 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
....+|+|++-..+. . +..+.++|+|||.+++-....
T Consensus 145 ~~~~fD~v~~~~~~~-----~-------------l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 145 SDTSMDAIIRIYAPC-----K-------------AEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CTTCEEEEEEESCCC-----C-------------HHHHHHHEEEEEEEEEEEECT
T ss_pred CCCceeEEEEeCChh-----h-------------HHHHHHhcCCCcEEEEEEcCH
Confidence 245799999865421 1 234567899999999988765
No 208
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.60 E-value=0.00071 Score=77.95 Aligned_cols=112 Identities=8% Similarity=-0.006 Sum_probs=60.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-----C-cccccCCChhhHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-----V-KGNGDVYDPENILSLHEF 392 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-----v-~~~GDI~~~~~~~~l~~~ 392 (621)
+|||||||+|+|+-+++.. ...+++|+|+.+.. +....++++ ..| + ..+||+++ .
T Consensus 542 ~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~a-------l~~a~~N~~-~ngl~~~~v~~i~~D~~~-----~---- 602 (703)
T 3v97_A 542 DFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTY-------LEWAERNLR-LNGLTGRAHRLIQADCLA-----W---- 602 (703)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHH-------HHHHHHHHH-HTTCCSTTEEEEESCHHH-----H----
T ss_pred cEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHH-------HHHHHHHHH-HcCCCccceEEEecCHHH-----H----
Confidence 8999999999999988863 34579999997521 000000110 011 1 34566553 1
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.. ....+|+|++|...-..+....+.....+.+..-+..+..+|+|||.+++-.-.
T Consensus 603 l~~--~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 603 LRE--ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHH--CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHh--cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 111 256899999996321111110000000112222233678999999999966544
No 209
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.60 E-value=0.0023 Score=65.05 Aligned_cols=116 Identities=14% Similarity=0.024 Sum_probs=67.3
Q ss_pred eEEEeccCC---ChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGP---GGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaP---GGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
.|||||||+ |.+++.+.. ..+.++++|+|+.+. ++....+.+.....+ ...||++++..+-...+ +.
T Consensus 80 ~vLDlGcG~pt~G~~~~~~~~-~~p~~~v~~vD~sp~-------~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~-~~ 150 (274)
T 2qe6_A 80 QFLDLGSGLPTVQNTHEVAQS-VNPDARVVYVDIDPM-------VLTHGRALLAKDPNTAVFTADVRDPEYILNHPD-VR 150 (274)
T ss_dssp EEEEETCCSCCSSCHHHHHHH-HCTTCEEEEEESSHH-------HHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHH-HH
T ss_pred EEEEECCCCCCCChHHHHHHH-hCCCCEEEEEECChH-------HHHHHHHhcCCCCCeEEEEeeCCCchhhhccch-hh
Confidence 799999999 988876654 456789999998642 100000000000112 56889998653211000 01
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
..+....+|+|++=+....-...... .-+..+...|+|||.|++-.+..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~---------~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVD---------RVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHH---------HHHHHHHHHSCTTCEEEEEEEBC
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHH---------HHHHHHHHhCCCCcEEEEEEecC
Confidence 11233478999988765432222111 11224567899999999998875
No 210
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.60 E-value=0.011 Score=60.51 Aligned_cols=100 Identities=18% Similarity=0.031 Sum_probs=61.0
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC-C-cccccCCChhhHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG-V-KGNGDVYDPENIL 387 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G-v-~~~GDI~~~~~~~ 387 (621)
+++|+ +|||+|||.|+|+-.++.+ ..++++|+|+.+.. .+ .-.++.+ ...+ + ..+||..+..
T Consensus 123 ~~~g~--~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a---~~----~~~~N~~~N~v~~~v~~~~~D~~~~~--- 188 (278)
T 3k6r_A 123 AKPDE--LVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYT---FK----FLVENIHLNKVEDRMSAYNMDNRDFP--- 188 (278)
T ss_dssp CCTTC--EEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHH---HH----HHHHHHHHTTCTTTEEEECSCTTTCC---
T ss_pred cCCCC--EEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHH---HH----HHHHHHHHcCCCCcEEEEeCcHHHhc---
Confidence 47787 8999999999999988865 34789999998631 00 0000000 0011 1 3467765411
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
....+|.|+.|--+.. .+.. -.|+.+|++||.+.+=.|
T Consensus 189 ----------~~~~~D~Vi~~~p~~~--~~~l-------------~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 189 ----------GENIADRILMGYVVRT--HEFI-------------PKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ----------CCSCEEEEEECCCSSG--GGGH-------------HHHHHHEEEEEEEEEEEE
T ss_pred ----------cccCCCEEEECCCCcH--HHHH-------------HHHHHHcCCCCEEEEEee
Confidence 2457999998754322 1111 236778999998866544
No 211
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.59 E-value=0.00089 Score=65.99 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=59.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GDI~~~~~~~~l~~~v 393 (621)
++||+|||.|.++.+++......++++|+|+.+.. .....+.+. ..|. ...||..+ .+....
T Consensus 75 ~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~-------~~~a~~~~~-~~g~~~~i~~~~~d~~~-----~l~~l~ 141 (232)
T 3cbg_A 75 QVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNA-------TAIAKKYWQ-KAGVAEKISLRLGPALA-----TLEQLT 141 (232)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHH-------HHHHHHHHH-HHTCGGGEEEEESCHHH-----HHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEEcCHHH-----HHHHHH
Confidence 79999999999999998866546899999987421 000000000 0121 23455431 122211
Q ss_pred HhhcCC--CcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 394 MKSTKG--RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 394 ~~~~~~--~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
..+ ..+|+|++|+.. .+.. ..+..+..+|+|||.+|+-
T Consensus 142 ---~~~~~~~fD~V~~d~~~-----~~~~---------~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 142 ---QGKPLPEFDLIFIDADK-----RNYP---------RYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp ---TSSSCCCEEEEEECSCG-----GGHH---------HHHHHHHHTEEEEEEEEEE
T ss_pred ---hcCCCCCcCEEEECCCH-----HHHH---------HHHHHHHHHcCCCeEEEEe
Confidence 112 679999999752 1111 1233457899999999984
No 212
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.58 E-value=0.0083 Score=63.37 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=59.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||||||+|.++..++.+. +..+++++|+... +....+ ..++ ...||++++-
T Consensus 206 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~--------~~~a~~----~~~v~~~~~d~~~~~------------- 259 (368)
T 3reo_A 206 TIVDVGGGTGAVASMIVAKY-PSINAINFDLPHV--------IQDAPA----FSGVEHLGGDMFDGV------------- 259 (368)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEECHHH--------HTTCCC----CTTEEEEECCTTTCC-------------
T ss_pred EEEEeCCCcCHHHHHHHHhC-CCCEEEEEehHHH--------HHhhhh----cCCCEEEecCCCCCC-------------
Confidence 89999999999999998754 6789999998321 111000 1233 4678988621
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.. |+|++-.....-..+.. ...+.-+.+.|+|||.+++--+.
T Consensus 260 -p~~-D~v~~~~vlh~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 260 -PKG-DAIFIKWICHDWSDEHC---------LKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp -CCC-SEEEEESCGGGBCHHHH---------HHHHHHHHHHSCTTCEEEEEECC
T ss_pred -CCC-CEEEEechhhcCCHHHH---------HHHHHHHHHHcCCCCEEEEEEec
Confidence 223 99988664422111111 11223456788999999886554
No 213
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.57 E-value=0.0014 Score=68.51 Aligned_cols=122 Identities=10% Similarity=0.059 Sum_probs=72.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---CcccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---VKGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||||||.|.++.++..+ ++..+++|+|+.+.- +....+++ ...| ....+|+.+.
T Consensus 199 ~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~s~~~-------l~~a~~~~-~~~~~~~~~~~~d~~~~------------ 257 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARH-SPKIRLTLCDVSAPA-------VEASRATL-AANGVEGEVFASNVFSE------------ 257 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHH-CTTCBCEEEESBHHH-------HHHHHHHH-HHTTCCCEEEECSTTTT------------
T ss_pred eEEEecCccCHHHHHHHHH-CCCCEEEEEECCHHH-------HHHHHHHH-HHhCCCCEEEEcccccc------------
Confidence 7999999999999998875 456799999987420 00000000 0011 1246677641
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEee
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 474 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~ 474 (621)
....+|+|+++..+.. |.....+ ....-+..+.++|+|||.+++-...... .-..+...|..+...
T Consensus 258 --~~~~fD~Iv~~~~~~~-g~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~~~~l~~~f~~~~~~ 323 (343)
T 2pjd_A 258 --VKGRFDMIISNPPFHD-GMQTSLD-----AAQTLIRGAVRHLNSGGELRIVANAFLP-----YPDVLDETFGFHEVI 323 (343)
T ss_dssp --CCSCEEEEEECCCCCS-SSHHHHH-----HHHHHHHHHGGGEEEEEEEEEEEETTSS-----HHHHHHHHHSCCEEE
T ss_pred --ccCCeeEEEECCCccc-CccCCHH-----HHHHHHHHHHHhCCCCcEEEEEEcCCCC-----cHHHHHHhcCceEEE
Confidence 1357999999876543 2221111 1222344678899999999997665321 223455666666554
No 214
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=96.57 E-value=0.0069 Score=61.03 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=60.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCC-CCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHD-FKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~-~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.|+..+..+ ..+++|+|+.+..- ......... ... .....+ ...+|+.+.. +. +
T Consensus 60 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~-~~~-~~~~~~~~~~~d~~~~~--~~----~--- 125 (293)
T 3thr_A 60 RVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNR-RKE-PAFDKWVIEEANWLTLD--KD----V--- 125 (293)
T ss_dssp EEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHT-TTS-HHHHTCEEEECCGGGHH--HH----S---
T ss_pred EEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhc-ccc-cccceeeEeecChhhCc--cc----c---
Confidence 8999999999999999875 35999999975200 000000000 000 000011 2355655421 01 0
Q ss_pred cCCCcccEEEecC-CCCCCCc-h-hhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADG-GFSVEGQ-E-NIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg-~~~~~G~-~-~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+....+|+|+|-| ....-.. . +.++ ....+..+.++|+|||.|++=+..
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSE------HRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHH------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHH------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2356899999964 3221111 0 0111 112233567899999999987654
No 215
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.55 E-value=0.0082 Score=57.64 Aligned_cols=102 Identities=17% Similarity=0.122 Sum_probs=57.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||||||+|.++..++.+. ..+++|+|+.+. ++....+++. ..| + ..+||+.+ .+.
T Consensus 57 ~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~-------~l~~a~~~~~-~~~~~~v~~~~~D~~~---------~~~ 117 (202)
T 2fpo_A 57 QCLDCFAGSGALGLEALSRY--AAGATLIEMDRA-------VSQQLIKNLA-TLKAGNARVVNSNAMS---------FLA 117 (202)
T ss_dssp EEEETTCTTCHHHHHHHHTT--CSEEEEECSCHH-------HHHHHHHHHH-HTTCCSEEEECSCHHH---------HHS
T ss_pred eEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHH-------HHHHHHHHHH-HcCCCcEEEEECCHHH---------HHh
Confidence 79999999999999877652 358999998742 0000000000 011 1 33455432 111
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|++|..+.. + ...+ .+.+ +...++|+|||.+++=...
T Consensus 118 --~~~~~fD~V~~~~p~~~-~--~~~~------~l~~-l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 118 --QKGTPHNIVFVDPPFRR-G--LLEE------TINL-LEDNGWLADEALIYVESEV 162 (202)
T ss_dssp --SCCCCEEEEEECCSSST-T--THHH------HHHH-HHHTTCEEEEEEEEEEEEG
T ss_pred --hcCCCCCEEEECCCCCC-C--cHHH------HHHH-HHhcCccCCCcEEEEEECC
Confidence 12457999999976431 1 1111 1111 1225679999999876654
No 216
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.55 E-value=0.0011 Score=66.19 Aligned_cols=98 Identities=14% Similarity=0.077 Sum_probs=60.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhcC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTK 398 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~~ 398 (621)
+|||+|||+|.++..+..+ ..+++|+|+.+. +.....+... +....+|+.+.. +.
T Consensus 57 ~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~l~~a~~~~~---~~~~~~d~~~~~------------~~ 111 (260)
T 2avn_A 57 RVLDLGGGTGKWSLFLQER---GFEVVLVDPSKE-------MLEVAREKGV---KNVVEAKAEDLP------------FP 111 (260)
T ss_dssp EEEEETCTTCHHHHHHHTT---TCEEEEEESCHH-------HHHHHHHHTC---SCEEECCTTSCC------------SC
T ss_pred eEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHH-------HHHHHHhhcC---CCEEECcHHHCC------------CC
Confidence 8999999999999998875 468999998642 0000000000 123466776522 12
Q ss_pred CCcccEEEecCCCC-CCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 399 GRGVHFMMADGGFS-VEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 399 ~~~vDlVlsDg~~~-~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|++.+... ... + ....+..+.++|+|||.+++-++..
T Consensus 112 ~~~fD~v~~~~~~~~~~~--~---------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVE--N---------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TTCEEEEEECSSHHHHCS--C---------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCCEEEEEEcchhhhccc--c---------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 45799999864221 100 1 1112334578899999999988763
No 217
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.53 E-value=0.0014 Score=68.75 Aligned_cols=100 Identities=11% Similarity=0.002 Sum_probs=57.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||.|.++..+.++ ...+++|+|+.+.-......+... .+ ...+ ...||+.+.. +
T Consensus 67 ~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~~~~~a~~~~~~~---~~--~~~i~~~~~d~~~~~------------~ 127 (340)
T 2fyt_A 67 VVLDVGCGTGILSMFAAKA--GAKKVLGVDQSEILYQAMDIIRLN---KL--EDTITLIKGKIEEVH------------L 127 (340)
T ss_dssp EEEEETCTTSHHHHHHHHT--TCSEEEEEESSTHHHHHHHHHHHT---TC--TTTEEEEESCTTTSC------------C
T ss_pred EEEEeeccCcHHHHHHHHc--CCCEEEEEChHHHHHHHHHHHHHc---CC--CCcEEEEEeeHHHhc------------C
Confidence 8999999999999988875 346999999873100000000000 00 0112 3567877531 1
Q ss_pred CCCcccEEEecCCCCC-CCchhhHHHHHHHHHHHHHHhhhhccCCCcEEE
Q psy13508 398 KGRGVHFMMADGGFSV-EGQENIQEILSKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~-~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
...++|+|+|++.+.. ......+ ..+..+.++|+|||.++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~~~~---------~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFESMLD---------SVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTCHHH---------HHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHHHHH---------HHHHHHHhhcCCCcEEE
Confidence 2468999999873222 1111111 11223468899999987
No 218
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.53 E-value=0.00067 Score=69.12 Aligned_cols=101 Identities=13% Similarity=0.078 Sum_probs=61.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC------CC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY------GV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~------Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||+|.++.++..+ ..+++|+|+.+. ++....+.+ ... .+ ...||+.+..
T Consensus 85 ~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~------- 146 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL---GWEVTALELSTS-------VLAAFRKRL-AEAPADVRDRCTLVQGDMSAFA------- 146 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT---TCCEEEEESCHH-------HHHHHHHHH-HTSCHHHHTTEEEEECBTTBCC-------
T ss_pred cEEEEeccCCHHHHHHHHc---CCeEEEEECCHH-------HHHHHHHHH-hhcccccccceEEEeCchhcCC-------
Confidence 7999999999999999875 468999998742 000000000 011 12 4578887632
Q ss_pred HHHhhcCCCcccEEEec-CCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 392 FVMKSTKGRGVHFMMAD-GGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsD-g~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
....+|+|++- +.......+. ....+..+.++|+|||.||+-++..
T Consensus 147 ------~~~~fD~v~~~~~~~~~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 147 ------LDKRFGTVVISSGSINELDEAD---------RRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp ------CSCCEEEEEECHHHHTTSCHHH---------HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ------cCCCcCEEEECCcccccCCHHH---------HHHHHHHHHHHcCCCcEEEEEeecC
Confidence 14679998864 2222211111 1122334668899999999999874
No 219
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.52 E-value=0.0088 Score=61.21 Aligned_cols=127 Identities=11% Similarity=-0.083 Sum_probs=67.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCC-CCccccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPS-ETFEPYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~-~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|+++..+..+ ...+++|+|+.+.. ......+..... ..-.....+ ...+|+.+....+.+ .
T Consensus 37 ~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~- 109 (313)
T 3bgv_A 37 TVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF----R- 109 (313)
T ss_dssp EEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC----S-
T ss_pred EEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc----c-
Confidence 8999999999999988863 46799999987420 000000000000 000000012 356777753210000 0
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHH
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLY 465 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~ 465 (621)
.....+|+|+|-.+....- ++.. -....+..+.++|+|||.|++-++.. ..+...+.
T Consensus 110 -~~~~~fD~V~~~~~l~~~~-~~~~------~~~~~l~~~~~~LkpgG~li~~~~~~-----~~l~~~~~ 166 (313)
T 3bgv_A 110 -DPQMCFDICSCQFVCHYSF-ESYE------QADMMLRNACERLSPGGYFIGTTPNS-----FELIRRLE 166 (313)
T ss_dssp -STTCCEEEEEEETCGGGGG-GSHH------HHHHHHHHHHTTEEEEEEEEEEEECH-----HHHHHHHT
T ss_pred -cCCCCEEEEEEecchhhcc-CCHH------HHHHHHHHHHHHhCCCcEEEEecCCh-----HHHHHHHH
Confidence 0134799999976543210 0111 01122335678999999999988763 34555444
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.49 E-value=0.0018 Score=67.48 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=62.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..++.+. +..+++++|+...-......+... .. ...+ ...||+.+... +
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~~~~---~~--~~~v~~~~~d~~~~~~-----------~ 244 (352)
T 3mcz_A 182 TVIDLAGGHGTYLAQVLRRH-PQLTGQIWDLPTTRDAARKTIHAH---DL--GGRVEFFEKNLLDARN-----------F 244 (352)
T ss_dssp EEEEETCTTCHHHHHHHHHC-TTCEEEEEECGGGHHHHHHHHHHT---TC--GGGEEEEECCTTCGGG-----------G
T ss_pred EEEEeCCCcCHHHHHHHHhC-CCCeEEEEECHHHHHHHHHHHHhc---CC--CCceEEEeCCcccCcc-----------c
Confidence 89999999999999998754 568999999832100000000000 00 0012 46788887431 0
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.+.++|+|++-.....-..+.. ...+.-+...|+|||.+++--+-
T Consensus 245 ~~~~~D~v~~~~vlh~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 245 EGGAADVVMLNDCLHYFDAREA---------REVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp TTCCEEEEEEESCGGGSCHHHH---------HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCCccEEEEecccccCCHHHH---------HHHHHHHHHHcCCCCEEEEEEec
Confidence 2456999999654422111111 11223456788999999886543
No 221
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.49 E-value=0.0088 Score=61.63 Aligned_cols=118 Identities=9% Similarity=-0.052 Sum_probs=61.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|+.+..++.+ ..+.++|+|+.+.. .....+............+.+ ...+|+........+. ..
T Consensus 51 ~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~----~~ 124 (302)
T 2vdw_A 51 KVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVR----EV 124 (302)
T ss_dssp EEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHH----TT
T ss_pred eEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhh----cc
Confidence 8999999999977755442 34689999998521 000000000000000000011 1245554332222222 12
Q ss_pred cCCCcccEEEecCCCCCC-CchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVE-GQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~-G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.....+|+|+|=.+.... ..+.. ...+..+.++|||||.||+-+..
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~---------~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHY---------ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTH---------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCCeeEEEECchHHHhCCHHHH---------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 234689999987654321 11111 12334567899999999997765
No 222
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.49 E-value=0.011 Score=62.29 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=59.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..++.+. +..+++++|+... +....+ ..++ ...||++++-
T Consensus 204 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~--------~~~a~~----~~~v~~~~~D~~~~~------------- 257 (364)
T 3p9c_A 204 TLVDVGGGVGATVAAIAAHY-PTIKGVNFDLPHV--------ISEAPQ----FPGVTHVGGDMFKEV------------- 257 (364)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEECHHH--------HTTCCC----CTTEEEEECCTTTCC-------------
T ss_pred EEEEeCCCCCHHHHHHHHHC-CCCeEEEecCHHH--------HHhhhh----cCCeEEEeCCcCCCC-------------
Confidence 89999999999999998754 6789999998321 111000 1223 5678988621
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.. |+|++-.....-..+.. ...+.-+.+.|+|||.+++--+.
T Consensus 258 -p~~-D~v~~~~vlh~~~d~~~---------~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 258 -PSG-DTILMKWILHDWSDQHC---------ATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp -CCC-SEEEEESCGGGSCHHHH---------HHHHHHHHHHSCTTCEEEEEECC
T ss_pred -CCC-CEEEehHHhccCCHHHH---------HHHHHHHHHHcCCCCEEEEEEec
Confidence 223 99987654321111111 11223456788999999886544
No 223
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.46 E-value=0.0024 Score=60.81 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=61.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccC-CC-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYY-GV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~-Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+|||+|.++.++..+ +..+++|+|+.+.. .......+. ... .+ ...+|+.+..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~-------~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------- 106 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHM-------NEIALKNIADANLNDRIQIVQGDVHNIP---------- 106 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHH-------HHHHHHHHHHTTCTTTEEEEECBTTBCS----------
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHH-------HHHHHHHHHhccccCceEEEEcCHHHCC----------
Confidence 7999999999999999886 56799999986420 000000000 000 12 3567776532
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+....+|+|++.+..... ++... .+..+.++|+|||.+++-.
T Consensus 107 --~~~~~~D~v~~~~~l~~~--~~~~~---------~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 --IEDNYADLIVSRGSVFFW--EDVAT---------AFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp --SCTTCEEEEEEESCGGGC--SCHHH---------HHHHHHHHEEEEEEEEEEE
T ss_pred --CCcccccEEEECchHhhc--cCHHH---------HHHHHHHhCCCCCEEEEEe
Confidence 134689999998765432 12111 2234568899999998854
No 224
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=96.45 E-value=0.0056 Score=61.45 Aligned_cols=89 Identities=13% Similarity=0.205 Sum_probs=68.8
Q ss_pred CcccEEEecCCCCCCCCh---hhhHHHHHHHHHHHH-HHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQE---NIQEILSKRLYLCQF-LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~---~~d~~~~~~L~l~~l-~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
+++|+|..++.-.---++ -.||++ .+.-| .-|+..|+|||++|+|-|.--...++..+..+.+.|..+...+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~----~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAM----KLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHH----HHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHH----HHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 579999999987776555 245533 33323 4499999999999999998765567899999999999999999
Q ss_pred CCCCCCCCceeeecccCC
Q psy13508 151 PNTSRPANSERYIVCKWK 168 (621)
Q Consensus 151 P~aSR~~s~E~y~v~~~~ 168 (621)
|+..-. +.|++++-.++
T Consensus 286 P~cv~s-nTEv~~vF~~~ 302 (324)
T 3trk_A 286 PPCVTS-NTEMFFLFSNF 302 (324)
T ss_dssp CTTCCB-TTCEEEEEEEE
T ss_pred Cccccc-cceEEEEEEec
Confidence 975544 88998865543
No 225
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.44 E-value=0.01 Score=56.34 Aligned_cols=104 Identities=12% Similarity=0.088 Sum_probs=59.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc-ccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE-PYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~-~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
++||+|||+|.++..++.+ ...+++|+|+.+. +.....+... ....+ ...+|+.+..
T Consensus 26 ~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~-------~~~~a~~~~~~~~~~~~~~~~d~~~~~------------ 84 (209)
T 2p8j_A 26 TVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDL-------QLKKAENFSRENNFKLNISKGDIRKLP------------ 84 (209)
T ss_dssp EEEEESCCSSSCTHHHHHH--TTCEEEEEECCHH-------HHHHHHHHHHHHTCCCCEEECCTTSCC------------
T ss_pred EEEEECCCCCHHHHHHHHh--CCCEEEEEECCHH-------HHHHHHHHHHhcCCceEEEECchhhCC------------
Confidence 8999999999985444433 3468999998742 0000000000 00011 3466776522
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
.....+|+|++.+....-...+. ...+..+.++|+|||.+++-.+..
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMRKNDV---------KEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp SCTTCEEEEEECSCGGGSCHHHH---------HHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCCceeEEEEcChHHhCCHHHH---------HHHHHHHHHHcCCCcEEEEEEecc
Confidence 12457999999764432211111 112234568899999999998874
No 226
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.42 E-value=0.0015 Score=69.52 Aligned_cols=101 Identities=16% Similarity=0.015 Sum_probs=57.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|.++..+..+ ...+++|+|+.+.-......+.. ....+ + ...||+.+..
T Consensus 66 ~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s~~~~~a~~~~~~------~~~~~~v~~~~~d~~~~~------------ 125 (376)
T 3r0q_C 66 TVLDVGTGSGILAIWSAQA--GARKVYAVEATKMADHARALVKA------NNLDHIVEVIEGSVEDIS------------ 125 (376)
T ss_dssp EEEEESCTTTHHHHHHHHT--TCSEEEEEESSTTHHHHHHHHHH------TTCTTTEEEEESCGGGCC------------
T ss_pred EEEEeccCcCHHHHHHHhc--CCCEEEEEccHHHHHHHHHHHHH------cCCCCeEEEEECchhhcC------------
Confidence 8999999999999998875 23599999987210000000000 00001 2 3567776522
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
...++|+|+|+........+..-+ ..+..+.++|+|||.|++-
T Consensus 126 -~~~~~D~Iv~~~~~~~l~~e~~~~--------~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 -LPEKVDVIISEWMGYFLLRESMFD--------SVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp -CSSCEEEEEECCCBTTBTTTCTHH--------HHHHHHHHHEEEEEEEESS
T ss_pred -cCCcceEEEEcChhhcccchHHHH--------HHHHHHHhhCCCCeEEEEe
Confidence 136899999987433322111111 1122345889999998753
No 227
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.38 E-value=0.0057 Score=63.19 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=60.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--cc-CCC-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PY-YGV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~-~Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+|||+|.++..++.+. +..+++|+|+ +.- .. ...+.+. .. ..+ ...||+.++
T Consensus 170 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~-~~------~a~~~~~~~~~~~~v~~~~~d~~~~----------- 229 (334)
T 2ip2_A 170 SFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGS-LG------VARDNLSSLLAGERVSLVGGDMLQE----------- 229 (334)
T ss_dssp EEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTC-TH------HHHHHTHHHHHTTSEEEEESCTTTC-----------
T ss_pred EEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHH-HH------HHHHHHhhcCCCCcEEEecCCCCCC-----------
Confidence 89999999999999998764 5679999999 531 00 0000000 00 012 456788752
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.+.++|+|++-.....-..+.. ...+.-+...|+|||.+++--+.
T Consensus 230 ---~~~~~D~v~~~~vl~~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 230 ---VPSNGDIYLLSRIIGDLDEAAS---------LRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ---CCSSCSEEEEESCGGGCCHHHH---------HHHHHHHHHHSCTTCEEEEEECC
T ss_pred ---CCCCCCEEEEchhccCCCHHHH---------HHHHHHHHHhcCCCCEEEEEEec
Confidence 1356999998654421111111 11223456789999999887554
No 228
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.37 E-value=0.0021 Score=63.78 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=29.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+++. .|||+|||.|+|+..+..+. +.+.++|+|+.+
T Consensus 48 ~~~~--~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~ 83 (246)
T 2vdv_E 48 TKKV--TIADIGCGFGGLMIDLSPAF-PEDLILGMEIRV 83 (246)
T ss_dssp SCCE--EEEEETCTTSHHHHHHHHHS-TTSEEEEEESCH
T ss_pred CCCC--EEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCH
Confidence 3454 89999999999999988753 567999999874
No 229
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.37 E-value=0.007 Score=59.31 Aligned_cols=99 Identities=14% Similarity=0.065 Sum_probs=60.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~ 388 (621)
+++. +|||+|||+|.++..+..+.+ ++++|+|+.+.. .....+.+. ..| + ...||+..+
T Consensus 90 ~~~~--~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~-------~~~a~~~~~-~~~~~~v~~~~~d~~~~----- 152 (235)
T 1jg1_A 90 KPGM--NILEVGTGSGWNAALISEIVK--TDVYTIERIPEL-------VEFAKRNLE-RAGVKNVHVILGDGSKG----- 152 (235)
T ss_dssp CTTC--CEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHH-------HHHHHHHHH-HTTCCSEEEEESCGGGC-----
T ss_pred CCCC--EEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHH-------HHHHHHHHH-HcCCCCcEEEECCcccC-----
Confidence 4455 799999999999999988654 799999986420 000000000 011 1 245665211
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+ ....++|+|++++...... + .+...|+|||.+|+-+-..
T Consensus 153 ----~---~~~~~fD~Ii~~~~~~~~~----~-------------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 ----F---PPKAPYDVIIVTAGAPKIP----E-------------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ----C---GGGCCEEEEEECSBBSSCC----H-------------HHHHTEEEEEEEEEEECSS
T ss_pred ----C---CCCCCccEEEECCcHHHHH----H-------------HHHHhcCCCcEEEEEEecC
Confidence 0 0123599999998764221 1 2467899999999987653
No 230
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.37 E-value=0.0025 Score=61.66 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=56.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..+..+ +|+|+.+. +... ....++ ...+|+.+.. +
T Consensus 50 ~vLDiG~G~G~~~~~l~~~-------~~vD~s~~-------~~~~-----a~~~~~~~~~~d~~~~~------------~ 98 (219)
T 1vlm_A 50 RGVEIGVGTGRFAVPLKIK-------IGVEPSER-------MAEI-----ARKRGVFVLKGTAENLP------------L 98 (219)
T ss_dssp CEEEETCTTSTTHHHHTCC-------EEEESCHH-------HHHH-----HHHTTCEEEECBTTBCC------------S
T ss_pred cEEEeCCCCCHHHHHHHHH-------hccCCCHH-------HHHH-----HHhcCCEEEEcccccCC------------C
Confidence 7999999999999987653 88988641 0000 000022 3456765422 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
....+|+|++....... ++.+ ..+..+.++|+|||.+++-.+.
T Consensus 99 ~~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 KDESFDFALMVTTICFV--DDPE---------RALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp CTTCEEEEEEESCGGGS--SCHH---------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCeeEEEEcchHhhc--cCHH---------HHHHHHHHHcCCCcEEEEEEeC
Confidence 24579999998755332 1111 1223456789999999997654
No 231
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.36 E-value=0.017 Score=56.73 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=57.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++..+..+ ..+++|+|+.+. +.....+.. ...| + ..+||+.+..
T Consensus 44 ~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~-------~l~~a~~~~-~~~~~~v~~~~~d~~~~~----------- 101 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAER---GYEVVGLDLHEE-------MLRVARRKA-KERNLKIEFLQGDVLEIA----------- 101 (252)
T ss_dssp EEEEETCTTCHHHHHHHHT---TCEEEEEESCHH-------HHHHHHHHH-HHTTCCCEEEESCGGGCC-----------
T ss_pred EEEEeCCCCCHHHHHHHHC---CCeEEEEECCHH-------HHHHHHHHH-HhcCCceEEEECChhhcc-----------
Confidence 8999999999999988874 468999998742 000000000 0011 2 3466776421
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
....+|+|++.++...-- ..+ -....+..+.++|+|||.||+=+
T Consensus 102 --~~~~fD~v~~~~~~~~~~--~~~------~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 --FKNEFDAVTMFFSTIMYF--DEE------DLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --CCSCEEEEEECSSGGGGS--CHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --cCCCccEEEEcCCchhcC--CHH------HHHHHHHHHHHHcCCCeEEEEec
Confidence 135799999864321110 111 01122335678899999998754
No 232
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.31 E-value=0.0023 Score=62.19 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=59.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..+..+. .+++|+|+.+. +.....+. ..++ ...+|+.+.. .
T Consensus 43 ~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~------------~ 97 (239)
T 3bxo_A 43 SLLDVACGTGTHLEHFTKEF---GDTAGLELSED-------MLTHARKR---LPDATLHQGDMRDFR------------L 97 (239)
T ss_dssp EEEEETCTTSHHHHHHHHHH---SEEEEEESCHH-------HHHHHHHH---CTTCEEEECCTTTCC------------C
T ss_pred eEEEecccCCHHHHHHHHhC---CcEEEEeCCHH-------HHHHHHHh---CCCCEEEECCHHHcc------------c
Confidence 89999999999999988763 38999998642 00000000 0112 3467776532 1
Q ss_pred CCCcccEEEecC-CCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 398 KGRGVHFMMADG-GFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 398 ~~~~vDlVlsDg-~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...+|+|+|-. ....-. +.+. ....+..+.++|+|||.+++-.+..
T Consensus 98 -~~~~D~v~~~~~~~~~~~--~~~~------~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 -GRKFSAVVSMFSSVGYLK--TTEE------LGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp -SSCEEEEEECTTGGGGCC--SHHH------HHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred -CCCCcEEEEcCchHhhcC--CHHH------HHHHHHHHHHhcCCCeEEEEEeccC
Confidence 45799999643 222211 1111 1122335678899999999976654
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.31 E-value=0.0023 Score=68.30 Aligned_cols=115 Identities=13% Similarity=0.151 Sum_probs=62.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--cc-C-CC-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PY-Y-GV-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~-~-Gv-~~~GDI~~~~~~~~l~~~v 393 (621)
+|||||||+|+|+.++..+ + ..+++|+|+.+.. +....+++. .+ . .+ ...||+.+. +....
T Consensus 223 ~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~~a-------l~~a~~n~~~ngl~~~~v~~~~~D~~~~-----~~~~~ 288 (396)
T 3c0k_A 223 RVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQEA-------LDIARQNVELNKLDLSKAEFVRDDVFKL-----LRTYR 288 (396)
T ss_dssp EEEEESCTTCSHHHHHHHT-T-CSEEEEEESCHHH-------HHHHHHHHHHTTCCGGGEEEEESCHHHH-----HHHHH
T ss_pred eEEEeeccCCHHHHHHHHC-C-CCEEEEEECCHHH-------HHHHHHHHHHcCCCccceEEEECCHHHH-----HHHHH
Confidence 8999999999999999874 2 4689999987520 000000000 00 0 11 345665531 11111
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+ .+..+|+|++|-..-........+. .......+..++.+|+|||.+++-....
T Consensus 289 -~--~~~~fD~Ii~dpP~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 289 -D--RGEKFDVIVMDPPKFVENKSQLMGA--CRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp -H--TTCCEEEEEECCSSTTTCSSSSSCC--CTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -h--cCCCCCEEEECCCCCCCChhHHHHH--HHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 1 2468999999952211111000000 0111122335788999999999877664
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.30 E-value=0.002 Score=67.33 Aligned_cols=126 Identities=10% Similarity=0.011 Sum_probs=71.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCC----CeEEEEecCCCCCCCCCcccCCCCCCccccCC--C-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWR----AKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG--V-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~----~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G--v-~~~GDI~~~~~~~~l~~ 391 (621)
+|+|+|||+|+|+..+..+.... ..++|+|+.+.. +.....++. ..| + ...||..++.
T Consensus 133 ~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~-------~~~a~~n~~-~~g~~~~i~~~D~l~~~------- 197 (344)
T 2f8l_A 133 SILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLL-------ISLALVGAD-LQRQKMTLLHQDGLANL------- 197 (344)
T ss_dssp EEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHH-------HHHHHHHHH-HHTCCCEEEESCTTSCC-------
T ss_pred EEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHH-------HHHHHHHHH-hCCCCceEEECCCCCcc-------
Confidence 89999999999999888765322 789999987420 000000000 112 1 3466766521
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHH-------HHHHHHHHHHHhhhhccCCCcEEEEEE----ccCCCCChHHH
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEI-------LSKRLYLCQFLVSLFIVRPEGHFVCKV----FDMFTPFSAGL 460 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~-------~~~~L~l~~l~~al~~Lr~GG~fV~K~----F~~~~~~s~~l 460 (621)
....+|+|+++-.+........... -...+...-+.-+...|+|||.+++=+ |++.. ...+
T Consensus 198 ------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~--~~~i 269 (344)
T 2f8l_A 198 ------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD--FAKV 269 (344)
T ss_dssp ------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT--HHHH
T ss_pred ------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch--HHHH
Confidence 1457999999965422111110000 000122233446778999999988887 55432 4566
Q ss_pred HHHHHhc
Q psy13508 461 LYLLYRS 467 (621)
Q Consensus 461 l~~l~~~ 467 (621)
...|...
T Consensus 270 r~~l~~~ 276 (344)
T 2f8l_A 270 DKFIKKN 276 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 6555543
No 235
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.26 E-value=0.0021 Score=66.79 Aligned_cols=153 Identities=16% Similarity=0.200 Sum_probs=80.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|+.+..++.+ .+..++.++|+.+.- +.....+ ......+. ...+ ...||..+ . +..
T Consensus 111 ~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~-~~~~~~~~-~~rv~~~~~D~~~-----~----l~~- 177 (314)
T 2b2c_A 111 RVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFL-PGMSCGFS-HPKLDLFCGDGFE-----F----LKN- 177 (314)
T ss_dssp EEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHC-TTTSGGGG-CTTEEEECSCHHH-----H----HHH-
T ss_pred EEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHH-HHhccccC-CCCEEEEEChHHH-----H----HHh-
Confidence 7999999999999999864 346899999986420 0000000 00000000 0011 23444432 1 211
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCC--CCChHHHHHHHHhccceeEe
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCI 473 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~--~~~s~~ll~~l~~~F~~V~i 473 (621)
....+|+|++|..... +.. ..|. ..-+..+.++|+|||.+|+-.-... ......+...++..|..|.+
T Consensus 178 -~~~~fD~Ii~d~~~~~-~~~-------~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~ 248 (314)
T 2b2c_A 178 -HKNEFDVIITDSSDPV-GPA-------ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTY 248 (314)
T ss_dssp -CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEE
T ss_pred -cCCCceEEEEcCCCCC-Ccc-------hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceE
Confidence 2567999999974221 110 1122 2223356789999999999752211 11234556678888998876
Q ss_pred ecC-CCCCCCCceEEEEEeec
Q psy13508 474 FKP-NTSRPANSERYIVCKWK 493 (621)
Q Consensus 474 ~KP-~aSR~~ssE~YlVc~g~ 493 (621)
+.- ..+.++--=-|++|...
T Consensus 249 ~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 249 AQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEECTTSGGGEEEEEEEESS
T ss_pred EEEEecCcCCCceEEEEEeCC
Confidence 532 22322211148888654
No 236
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.24 E-value=0.0042 Score=60.55 Aligned_cols=116 Identities=9% Similarity=0.007 Sum_probs=67.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+++. +|||+|||+|.++.++..+ .++++|+|+.+. +.....+. ...+ ...+|+.+.-.
T Consensus 47 ~~~~--~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~-------~~~~a~~~---~~~~~~~~~d~~~~~~------ 105 (226)
T 3m33_A 47 TPQT--RVLEAGCGHGPDAARFGPQ---AARWAAYDFSPE-------LLKLARAN---APHADVYEWNGKGELP------ 105 (226)
T ss_dssp CTTC--EEEEESCTTSHHHHHHGGG---SSEEEEEESCHH-------HHHHHHHH---CTTSEEEECCSCSSCC------
T ss_pred CCCC--eEEEeCCCCCHHHHHHHHc---CCEEEEEECCHH-------HHHHHHHh---CCCceEEEcchhhccC------
Confidence 3454 8999999999999999875 479999998742 00000000 0112 45677753210
Q ss_pred HHHhhcC-CCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc-cc
Q psy13508 392 FVMKSTK-GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YK 469 (621)
Q Consensus 392 ~v~~~~~-~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~-F~ 469 (621)
+. ...+|+|+|.- + .... +..+..+|+|||.++ .+.++. ....+...+... |.
T Consensus 106 -----~~~~~~fD~v~~~~--~------~~~~---------l~~~~~~LkpgG~l~--~~~~~~-~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 106 -----AGLGAPFGLIVSRR--G------PTSV---------ILRLPELAAPDAHFL--YVGPRL-NVPEVPERLAAVGWD 160 (226)
T ss_dssp -----TTCCCCEEEEEEES--C------CSGG---------GGGHHHHEEEEEEEE--EEESSS-CCTHHHHHHHHTTCE
T ss_pred -----CcCCCCEEEEEeCC--C------HHHH---------HHHHHHHcCCCcEEE--EeCCcC-CHHHHHHHHHHCCCe
Confidence 12 46899999971 1 1111 113567899999999 333322 133566666653 55
Q ss_pred eeEee
Q psy13508 470 QVCIF 474 (621)
Q Consensus 470 ~V~i~ 474 (621)
.+.+.
T Consensus 161 ~~~~~ 165 (226)
T 3m33_A 161 IVAED 165 (226)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 237
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.21 E-value=0.0024 Score=67.01 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=79.0
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc----c--CCC-cccccCCChhhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP----Y--YGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~----~--~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
+|||||||.|+++..++++ .+..+++++|+.+. ++....+.+.. . ..+ ...||..+
T Consensus 123 ~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~-------~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~--------- 185 (334)
T 1xj5_A 123 KVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKM-------VVDVSKQFFPDVAIGYEDPRVNLVIGDGVA--------- 185 (334)
T ss_dssp EEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHH-------HHHHHHHHCHHHHGGGGSTTEEEEESCHHH---------
T ss_pred EEEEECCCccHHHHHHHHc-CCCCEEEEEECCHH-------HHHHHHHHHHhhccccCCCcEEEEECCHHH---------
Confidence 8999999999999998864 34679999998742 00000000100 0 011 23455432
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCC--ChHHHHHHHHhccc
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP--FSAGLLYLLYRSYK 469 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~--~s~~ll~~l~~~F~ 469 (621)
++.. .....+|+|++|..... +... . +. ...-+..+.++|+|||.||+-.-..+.. ....++..++..|.
T Consensus 186 ~l~~-~~~~~fDlIi~d~~~p~-~~~~--~-l~---~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 186 FLKN-AAEGSYDAVIVDSSDPI-GPAK--E-LF---EKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFK 257 (334)
T ss_dssp HHHT-SCTTCEEEEEECCCCTT-SGGG--G-GG---SHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred HHHh-ccCCCccEEEECCCCcc-Ccch--h-hh---HHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCc
Confidence 1211 12457999999975322 2111 0 00 1112234678899999999974322111 12345566788888
Q ss_pred e-eEee-cCCCCCCCCceEEEEEee
Q psy13508 470 Q-VCIF-KPNTSRPANSERYIVCKW 492 (621)
Q Consensus 470 ~-V~i~-KP~aSR~~ssE~YlVc~g 492 (621)
. +..+ -+..+-++.-=-|++|..
T Consensus 258 ~~~~~~~~~vP~y~~g~~gf~~as~ 282 (334)
T 1xj5_A 258 GSVNYAWTSVPTYPSGVIGFMLCST 282 (334)
T ss_dssp SCEEEEEEECTTSGGGEEEEEEEEC
T ss_pred cccceEEEeCCcccCCceEEEEccc
Confidence 4 3222 222233333334677754
No 238
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=96.20 E-value=0.011 Score=55.90 Aligned_cols=100 Identities=8% Similarity=-0.040 Sum_probs=60.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC--CC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY--GV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~--Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||+|||+|.++.++..+ ..+++|+|+.+.. +....+.. ... .+ ...+|+.+..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~-------~~~a~~~~-~~~~~~~~~~~~d~~~~~----------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL---GYEVTAVDQSSVG-------LAKAKQLA-QEKGVKITTVQSNLADFD----------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHH-------HHHHHHHH-HHHTCCEEEECCBTTTBS-----------
T ss_pred CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHH-------HHHHHHHH-HhcCCceEEEEcChhhcC-----------
Confidence 7999999999999988864 4689999986420 00000000 000 12 3467777532
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
+....+|+|++-.. . ..... ....+..+.++|+|||.+++-.+..
T Consensus 90 -~~~~~fD~v~~~~~--~---~~~~~------~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 -IVADAWEGIVSIFC--H---LPSSL------RQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp -CCTTTCSEEEEECC--C---CCHHH------HHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred -CCcCCccEEEEEhh--c---CCHHH------HHHHHHHHHHhcCCCcEEEEEEecc
Confidence 12467999998421 1 11110 1122335678999999999998874
No 239
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=96.17 E-value=0.0035 Score=65.48 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=60.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++..++.+. +..+++++|+ +.- ......+... .+ ...+ ...||+.++-
T Consensus 186 ~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~---~~--~~~v~~~~~d~~~~~------------ 246 (360)
T 1tw3_A 186 HVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDE---GL--SDRVDVVEGDFFEPL------------ 246 (360)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHT---TC--TTTEEEEECCTTSCC------------
T ss_pred EEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhc---CC--CCceEEEeCCCCCCC------------
Confidence 89999999999999998764 5689999998 420 0000000000 00 0012 4577887521
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.++|+|++......-..+.. ...+.-+...|+|||.+++--+.
T Consensus 247 --~~~~D~v~~~~vl~~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 --PRKADAIILSFVLLNWPDHDA---------VRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp --SSCEEEEEEESCGGGSCHHHH---------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCCccEEEEcccccCCCHHHH---------HHHHHHHHHhcCCCcEEEEEEEe
Confidence 234999998765532211111 11222346789999999986554
No 240
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.15 E-value=0.0029 Score=65.91 Aligned_cols=99 Identities=11% Similarity=0.042 Sum_probs=56.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++..+.++ ...+++|+|+.+.-......+... ...+ + ...||+.+..
T Consensus 41 ~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s~~~~~a~~~~~~~------~~~~~i~~~~~d~~~~~------------ 100 (328)
T 1g6q_1 41 IVLDVGCGTGILSMFAAKH--GAKHVIGVDMSSIIEMAKELVELN------GFSDKITLLRGKLEDVH------------ 100 (328)
T ss_dssp EEEEETCTTSHHHHHHHHT--CCSEEEEEESSTHHHHHHHHHHHT------TCTTTEEEEESCTTTSC------------
T ss_pred EEEEecCccHHHHHHHHHC--CCCEEEEEChHHHHHHHHHHHHHc------CCCCCEEEEECchhhcc------------
Confidence 8999999999999988874 346999999873100000000000 0001 2 3567777532
Q ss_pred cCCCcccEEEecCCCCC-CCchhhHHHHHHHHHHHHHHhhhhccCCCcEEE
Q psy13508 397 TKGRGVHFMMADGGFSV-EGQENIQEILSKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~-~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
....++|+|+|+..... .+....+ ..+..+.++|+|||.++
T Consensus 101 ~~~~~~D~Ivs~~~~~~l~~~~~~~---------~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 LPFPKVDIIISEWMGYFLLYESMMD---------TVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CSSSCEEEEEECCCBTTBSTTCCHH---------HHHHHHHHHEEEEEEEE
T ss_pred CCCCcccEEEEeCchhhcccHHHHH---------HHHHHHHhhcCCCeEEE
Confidence 12368999999853221 1111111 11223457899999987
No 241
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.12 E-value=0.019 Score=56.09 Aligned_cols=131 Identities=10% Similarity=0.009 Sum_probs=70.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
.+||+|||.|.++..+..+ .+.+.++|+|+.+. .+........ ....+ ...||+.+ .+..
T Consensus 37 ~vLDiGcG~G~~~~~lA~~-~p~~~v~giD~s~~-------~l~~a~~~~~~~~l~nv~~~~~Da~~-----~l~~---- 99 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAKD-RPEQDFLGIEVHSP-------GVGACLASAHEEGLSNLRVMCHDAVE-----VLHK---- 99 (218)
T ss_dssp EEEEESCTTCHHHHHHHHH-CTTSEEEEECSCHH-------HHHHHHHHHHHTTCSSEEEECSCHHH-----HHHH----
T ss_pred eEEEEeeeChHHHHHHHHH-CCCCeEEEEEecHH-------HHHHHHHHHHHhCCCcEEEEECCHHH-----HHHH----
Confidence 8999999999999988875 46789999998742 0000000000 00012 34555542 1111
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc--cceeE
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS--YKQVC 472 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~--F~~V~ 472 (621)
.+....+|.|++.......-...... ++. -.-+..+..+|||||.|++.+-.. .+...++..+... |..+.
T Consensus 100 ~~~~~~~d~v~~~~~~p~~~~~~~~r----r~~~~~~l~~~~r~LkpGG~l~i~td~~--~~~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 100 MIPDNSLRMVQLFFPDPWHKARHNKR----RIVQVPFAELVKSKLQLGGVFHMATDWE--PYAEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp HSCTTCEEEEEEESCCCCCSGGGGGG----SSCSHHHHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHHTSTTEEECC
T ss_pred HcCCCChheEEEeCCCCccchhhhhh----hhhhHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHhCCCccccc
Confidence 13466899999875443322111110 011 112335668899999999877431 1233455555543 55543
No 242
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.10 E-value=0.0048 Score=61.15 Aligned_cols=119 Identities=13% Similarity=0.008 Sum_probs=60.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
.+||||||.|.++..+..+ .+...++|+|+.+.- ......+.+.....-.....+ ...||+.+. +...
T Consensus 49 ~vLDiGcG~G~~~~~la~~-~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-----l~~~---- 118 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPL-FPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-----LPNF---- 118 (235)
T ss_dssp EEEEETCTTCHHHHHHGGG-STTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-----HHHH----
T ss_pred eEEEEccCCcHHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-----hhhh----
Confidence 8999999999999988764 456899999987410 000000000000000000112 457787751 1111
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHH-HHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~-l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+....+|.|++.......-.. +. ..++. -.-+..+..+|+|||.|++.+-.
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~---h~-krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRT---KH-KWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp CCTTCEEEEEEESCC---------------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcCeeEEEEeCCCchhhhh---hh-hhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 235679999875432211000 00 01111 11233567889999999988643
No 243
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.98 E-value=0.099 Score=52.81 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=25.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEec-CC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTL-TG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL-~~ 351 (621)
+|||||||.|.++.++..+ + .++++|+|+ .+
T Consensus 82 ~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~ 113 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDP 113 (281)
T ss_dssp EEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCH
T ss_pred eEEEecccccHHHHHHHHc-C-CCEEEEEeCCCH
Confidence 8999999999999977763 3 358999999 44
No 244
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.95 E-value=0.021 Score=56.60 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=31.2
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+++|. +|+|+|||.|-.+-++.. .++.++++|+|+.+
T Consensus 13 v~~g~--~VlDIGtGsG~l~i~la~-~~~~~~V~avDi~~ 49 (225)
T 3kr9_A 13 VSQGA--ILLDVGSDHAYLPIELVE-RGQIKSAIAGEVVE 49 (225)
T ss_dssp SCTTE--EEEEETCSTTHHHHHHHH-TTSEEEEEEEESSH
T ss_pred CCCCC--EEEEeCCCcHHHHHHHHH-hCCCCEEEEEECCH
Confidence 56776 899999999999998886 45667999999975
No 245
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.92 E-value=0.025 Score=53.74 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=26.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|+++.++..+ ...+++|+|+.+
T Consensus 52 ~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~ 82 (207)
T 1wy7_A 52 VVADLGAGTGVLSYGALLL--GAKEVICVEVDK 82 (207)
T ss_dssp EEEEETCTTCHHHHHHHHT--TCSEEEEEESCH
T ss_pred EEEEeeCCCCHHHHHHHHc--CCCEEEEEECCH
Confidence 8999999999999998875 235899999874
No 246
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=95.90 E-value=0.0083 Score=60.61 Aligned_cols=31 Identities=10% Similarity=0.019 Sum_probs=23.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||||||+|.++..+.. . ...+++|+|+.+
T Consensus 74 ~vLDiGcG~G~~~~l~~~-~-~~~~v~gvD~s~ 104 (289)
T 2g72_A 74 TLIDIGSGPTVYQLLSAC-S-HFEDITMTDFLE 104 (289)
T ss_dssp EEEEETCTTCCGGGTTGG-G-GCSEEEEECSCH
T ss_pred eEEEECCCcChHHHHhhc-c-CCCeEEEeCCCH
Confidence 899999999995543332 2 346999999974
No 247
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.87 E-value=0.0029 Score=64.32 Aligned_cols=110 Identities=8% Similarity=-0.045 Sum_probs=56.7
Q ss_pred eEEEeccCCChhHHHHHHhc---CCCCeE--EEEecCCCCCCCCCcccCCCCCCccccCC---C---cccccCCChhhHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRK---KWRAKG--IGFTLTGSHDFKLDDFFAGPSETFEPYYG---V---KGNGDVYDPENIL 387 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~---~~~~k~--~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v---~~~GDI~~~~~~~ 387 (621)
+|||+|||+|.++..++.+. .+..++ +|+|..+. ++....+......| + ..++|+ .
T Consensus 55 ~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~-------ml~~a~~~~~~~~~~~~v~~~~~~~~~------~ 121 (292)
T 2aot_A 55 KILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAE-------QIAKYKELVAKTSNLENVKFAWHKETS------S 121 (292)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHH-------HHHHHHHHHHTCSSCTTEEEEEECSCH------H
T ss_pred eEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHH-------HHHHHHHHHHhccCCCcceEEEEecch------h
Confidence 89999999999887554332 234544 89987641 11000000000001 1 012222 1
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
.+.......+....+|+|+|=.....-. +.+. .+.-+.++|||||.|++-.+..
T Consensus 122 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~---------~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 122 EYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPA---------TLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHH---------HHHHHHHTEEEEEEEEEEEECT
T ss_pred hhhhhhccccCCCceeEEEEeeeeeecC--CHHH---------HHHHHHHHcCCCcEEEEEEecC
Confidence 2211111112356899999876553322 2211 2334568999999999987653
No 248
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=95.83 E-value=0.02 Score=60.58 Aligned_cols=144 Identities=15% Similarity=0.049 Sum_probs=74.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCcc-cc-CCC-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFE-PY-YGV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~-~~-~Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||||+|-|+...+++.+. ..++.++++.+.- +.....|.......+. |. ..+ ...||.. +.+.+...
T Consensus 191 rVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~-----~~L~~~~~ 263 (364)
T 2qfm_A 191 DVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI-----PVLKRYAK 263 (364)
T ss_dssp EEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHH-----HHHHHHHH
T ss_pred EEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHH-----HHHHhhhc
Confidence 89999999999999998753 3789999986420 0000000000000000 00 011 1233433 23322110
Q ss_pred hhcCCCcccEEEecCCC-CCCCchhhHHHHHHHHHHHHH-HhhhhccCCCcEEEEEEccCCCCChHHHHHH-HHhcccee
Q psy13508 395 KSTKGRGVHFMMADGGF-SVEGQENIQEILSKRLYLCQF-LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYL-LYRSYKQV 471 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~-~~~G~~~~de~~~~~L~l~~l-~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~-l~~~F~~V 471 (621)
.+..+|+|+.|..- +....+. + +...-.+..+ ..+.+.|+|||.+|+=.-...-+....++.. |++.|..|
T Consensus 264 ---~~~~fDvII~D~~d~P~~~~p~--~-L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v 337 (364)
T 2qfm_A 264 ---EGREFDYVINDLTAVPISTSPE--E-DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPV 337 (364)
T ss_dssp ---HTCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCE
T ss_pred ---cCCCceEEEECCCCcccCcCch--h-hhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCce
Confidence 25689999999743 2211121 1 1111112222 2457899999999987655433233344443 88899999
Q ss_pred Eeec
Q psy13508 472 CIFK 475 (621)
Q Consensus 472 ~i~K 475 (621)
...|
T Consensus 338 ~~~~ 341 (364)
T 2qfm_A 338 EFSK 341 (364)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8743
No 249
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.82 E-value=0.021 Score=62.06 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=29.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++++ +|||||||+|.++..+..+.+ ..+++|+|+.+
T Consensus 241 ~~g~--~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~ 276 (433)
T 1u2z_A 241 KKGD--TFMDLGSGVGNCVVQAALECG-CALSFGCEIMD 276 (433)
T ss_dssp CTTC--EEEEESCTTSHHHHHHHHHHC-CSEEEEEECCH
T ss_pred CCCC--EEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCH
Confidence 4565 899999999999999987653 46899999874
No 250
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.74 E-value=0.022 Score=57.07 Aligned_cols=116 Identities=10% Similarity=0.042 Sum_probs=66.8
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----cccccCCChhhH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGDVYDPENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GDI~~~~~~ 386 (621)
+++|+ +|+|+|||.|-.+-++..+ ++.++++|+|+.+.- +....++.+ ..|+ ...||..+.-
T Consensus 19 v~~g~--~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~a-------l~~A~~N~~-~~gl~~~I~v~~gD~l~~~-- 85 (244)
T 3gnl_A 19 ITKNE--RIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGP-------FQSAQKQVR-SSGLTEQIDVRKGNGLAVI-- 85 (244)
T ss_dssp CCSSE--EEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHH-------HHHHHHHHH-HTTCTTTEEEEECSGGGGC--
T ss_pred CCCCC--EEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCceEEEEecchhhcc--
Confidence 56776 8999999999999988864 556789999997520 000000100 1121 2355655411
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHh
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR 466 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~ 466 (621)
..+..+|+|+.-|. | ..+...-+.-+...|+++|.||+---.+ ...+...|..
T Consensus 86 ----------~~~~~~D~Iviagm----G---------g~lI~~IL~~~~~~L~~~~~lIlq~~~~----~~~lr~~L~~ 138 (244)
T 3gnl_A 86 ----------EKKDAIDTIVIAGM----G---------GTLIRTILEEGAAKLAGVTKLILQPNIA----AWQLREWSEQ 138 (244)
T ss_dssp ----------CGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHH
T ss_pred ----------CccccccEEEEeCC----c---------hHHHHHHHHHHHHHhCCCCEEEEEcCCC----hHHHHHHHHH
Confidence 01124888765221 1 1122222335678899999999877554 4466655554
Q ss_pred c
Q psy13508 467 S 467 (621)
Q Consensus 467 ~ 467 (621)
.
T Consensus 139 ~ 139 (244)
T 3gnl_A 139 N 139 (244)
T ss_dssp H
T ss_pred C
Confidence 4
No 251
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=95.73 E-value=0.02 Score=59.69 Aligned_cols=96 Identities=14% Similarity=0.038 Sum_probs=60.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++..+..+. +..+++|+|+ +. ++....+ ..++ ...||++++ .
T Consensus 191 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~-------~~~~a~~----~~~v~~~~~d~~~~-------------~ 244 (352)
T 1fp2_A 191 SIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQ-------VVENLSG----SNNLTYVGGDMFTS-------------I 244 (352)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HH-------HHTTCCC----BTTEEEEECCTTTC-------------C
T ss_pred eEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HH-------HHhhccc----CCCcEEEeccccCC-------------C
Confidence 89999999999999998764 5679999998 42 1111001 1233 457888752 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCC---CcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRP---EGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~---GG~fV~K~F~ 451 (621)
+ .+|+|++-.....-.++. ....+.-+.+.|+| ||.+++--+.
T Consensus 245 -p-~~D~v~~~~~lh~~~d~~---------~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 245 -P-NADAVLLKYILHNWTDKD---------CLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp -C-CCSEEEEESCGGGSCHHH---------HHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred -C-CccEEEeehhhccCCHHH---------HHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 2 389999866543221111 11122345678899 9999887654
No 252
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.72 E-value=0.0052 Score=64.70 Aligned_cols=106 Identities=8% Similarity=0.027 Sum_probs=60.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++..++.+ .+..+++|+|+...-......+ .. .... ..+ ...||+.++.. ..
T Consensus 182 ~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~~~~~~~a~~~~-~~--~~~~--~~v~~~~~d~~~~~~----------~~ 245 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQY-NKEVEVTIVDLPQQLEMMRKQT-AG--LSGS--ERIHGHGANLLDRDV----------PF 245 (363)
T ss_dssp EEEEESCTTCHHHHHHHHH-STTCEEEEEECHHHHHHHHHHH-TT--CTTG--GGEEEEECCCCSSSC----------CC
T ss_pred EEEEeCCCcCHHHHHHHHh-CCCCEEEEEeCHHHHHHHHHHH-Hh--cCcc--cceEEEEccccccCC----------CC
Confidence 8999999999999999875 4678999999831100000000 00 0000 012 46788886310 01
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+.++|+|++=.....-..+.. ...+.-+.+.|+|||.+++--+
T Consensus 246 -p~~~D~v~~~~vlh~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 246 -PTGFDAVWMSQFLDCFSEEEV---------ISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp -CCCCSEEEEESCSTTSCHHHH---------HHHHHHHHHHCCTTCEEEEEEC
T ss_pred -CCCcCEEEEechhhhCCHHHH---------HHHHHHHHHhcCCCcEEEEEee
Confidence 357999998654422111111 1112245678999999988543
No 253
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.58 E-value=0.035 Score=55.14 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=66.3
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----cccccCCChhhH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGDVYDPENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GDI~~~~~~ 386 (621)
+++|+ +|+|+|||.|-.+-++..+ ++.++++|+|+.+.- +....++.+ ..|+ ...||..+.-
T Consensus 19 v~~g~--~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~a-------l~~A~~N~~-~~gl~~~I~~~~gD~l~~~-- 85 (230)
T 3lec_A 19 VPKGA--RLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGP-------YQSALKNVS-EHGLTSKIDVRLANGLSAF-- 85 (230)
T ss_dssp SCTTE--EEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHH-------HHHHHHHHH-HTTCTTTEEEEECSGGGGC--
T ss_pred CCCCC--EEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHH-------HHHHHHHHH-HcCCCCcEEEEECchhhcc--
Confidence 56776 8999999999999988864 556789999997520 000000100 1121 2456655421
Q ss_pred HHHHHHHHhhcCCCcccEEEe-cCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHH
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMA-DGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLY 465 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVls-Dg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~ 465 (621)
..+..+|+|+. -|+- .+..--+.-+...|+++|.||+---.+ ...+...|.
T Consensus 86 ----------~~~~~~D~IviaGmGg--------------~lI~~IL~~~~~~l~~~~~lIlqp~~~----~~~lr~~L~ 137 (230)
T 3lec_A 86 ----------EEADNIDTITICGMGG--------------RLIADILNNDIDKLQHVKTLVLQPNNR----EDDLRKWLA 137 (230)
T ss_dssp ----------CGGGCCCEEEEEEECH--------------HHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHH
T ss_pred ----------ccccccCEEEEeCCch--------------HHHHHHHHHHHHHhCcCCEEEEECCCC----hHHHHHHHH
Confidence 01225887664 2221 112222224677899999999877653 456665555
Q ss_pred hc
Q psy13508 466 RS 467 (621)
Q Consensus 466 ~~ 467 (621)
..
T Consensus 138 ~~ 139 (230)
T 3lec_A 138 AN 139 (230)
T ss_dssp HT
T ss_pred HC
Confidence 43
No 254
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.55 E-value=0.095 Score=54.62 Aligned_cols=102 Identities=12% Similarity=0.003 Sum_probs=60.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCC-C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYG-V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~G-v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+|||+|.++..++.+. +..+++|+|+ +.- +....+.+. ...+ + ...||+.+..
T Consensus 193 ~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~-------~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------- 253 (359)
T 1x19_A 193 KMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGA-------IDLVNENAAEKGVADRMRGIAVDIYKES---------- 253 (359)
T ss_dssp EEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGG-------HHHHHHHHHHTTCTTTEEEEECCTTTSC----------
T ss_pred EEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHH-------HHHHHHHHHhcCCCCCEEEEeCccccCC----------
Confidence 89999999999999998864 5679999998 521 000000000 0111 2 4578887632
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
. + ..|+|++-.....-.++. ....+.-+.+.|+|||.+++--+..
T Consensus 254 --~-~-~~D~v~~~~vlh~~~d~~---------~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 254 --Y-P-EADAVLFCRILYSANEQL---------STIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp --C-C-CCSEEEEESCGGGSCHHH---------HHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred --C-C-CCCEEEEechhccCCHHH---------HHHHHHHHHHhcCCCCEEEEEeccc
Confidence 1 1 239999866543221111 1112234568899999998766543
No 255
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.54 E-value=0.08 Score=55.66 Aligned_cols=103 Identities=10% Similarity=0.034 Sum_probs=60.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
++||+|||+|.++..++++ .+..+++++|+ +.- ......+... .+ ...+ ...||++++
T Consensus 205 ~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~~~~~---~l--~~~v~~~~~d~~~~------------- 264 (369)
T 3gwz_A 205 TAVDIGGGRGSLMAAVLDA-FPGLRGTLLER-PPVAEEARELLTGR---GL--ADRCEILPGDFFET------------- 264 (369)
T ss_dssp EEEEETCTTSHHHHHHHHH-CTTCEEEEEEC-HHHHHHHHHHHHHT---TC--TTTEEEEECCTTTC-------------
T ss_pred EEEEeCCCccHHHHHHHHH-CCCCeEEEEcC-HHHHHHHHHhhhhc---Cc--CCceEEeccCCCCC-------------
Confidence 8999999999999999876 46789999998 420 0000000000 00 0012 457888742
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
.+.++|+|++-.....-.++.. ...+.-+...|+|||.+++--+.
T Consensus 265 -~p~~~D~v~~~~vlh~~~d~~~---------~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 265 -IPDGADVYLIKHVLHDWDDDDV---------VRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp -CCSSCSEEEEESCGGGSCHHHH---------HHHHHHHHTTCCTTCEEEEEEEB
T ss_pred -CCCCceEEEhhhhhccCCHHHH---------HHHHHHHHHHcCCCCEEEEEEec
Confidence 1237999998765432211111 11223456789999999886544
No 256
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.43 E-value=0.011 Score=64.87 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=57.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||.|.++.++..+ +..+++|+|+.+.-......+..... ...+ ...||+.+..
T Consensus 161 ~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~~l~~A~~~~~~~gl-----~~~v~~~~~d~~~~~------------- 220 (480)
T 3b3j_A 161 IVLDVGCGSGILSFFAAQA--GARKIYAVEASTMAQHAEVLVKSNNL-----TDRIVVIPGKVEEVS------------- 220 (480)
T ss_dssp EEEEESCSTTHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHTTC-----TTTEEEEESCTTTCC-------------
T ss_pred EEEEecCcccHHHHHHHHc--CCCEEEEEEcHHHHHHHHHHHHHcCC-----CCcEEEEECchhhCc-------------
Confidence 8999999999999988763 45699999986410000000000000 0012 4577877521
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
-..++|+|+|++....-..+. .+..+..+.++|+|||.+++
T Consensus 221 ~~~~fD~Ivs~~~~~~~~~e~---------~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 LPEQVDIIISEPMGYMLFNER---------MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CSSCEEEEECCCCHHHHTCHH---------HHHHHHHGGGGEEEEEEEES
T ss_pred cCCCeEEEEEeCchHhcCcHH---------HHHHHHHHHHhcCCCCEEEE
Confidence 135799999975321111111 11223356789999999984
No 257
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.37 E-value=0.043 Score=56.58 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=59.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
++||+|||+|.++..++++. +..+++++|+ +.- ......+... .+ ...+ ...||++++-
T Consensus 172 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~---~~--~~~v~~~~~d~~~~~------------ 232 (332)
T 3i53_A 172 HVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDT---GL--SGRAQVVVGSFFDPL------------ 232 (332)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHT---TC--TTTEEEEECCTTSCC------------
T ss_pred EEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhc---Cc--CcCeEEecCCCCCCC------------
Confidence 89999999999999998754 5779999998 420 0000000000 00 0012 4578887421
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+.++|+|++=.....-.++.. ...+.-+.+.|+|||.+++--+.
T Consensus 233 --p~~~D~v~~~~vlh~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 233 --PAGAGGYVLSAVLHDWDDLSA---------VAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp --CCSCSEEEEESCGGGSCHHHH---------HHHHHHHHHHHTTTCEEEEEECC
T ss_pred --CCCCcEEEEehhhccCCHHHH---------HHHHHHHHHhcCCCCEEEEEeec
Confidence 237999998654422211111 11122455678999999986543
No 258
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.34 E-value=0.011 Score=63.08 Aligned_cols=98 Identities=15% Similarity=0.030 Sum_probs=55.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||||||.|-.|-++.+ .+ ..+|+|+|..+.-... ...... ..... + .+.||+.+.+
T Consensus 86 ~VLDvG~GtGiLs~~Aa~-aG-A~~V~ave~s~~~~~a-~~~~~~-----n~~~~~i~~i~~~~~~~~------------ 145 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQ-AG-ARRVYAVEASAIWQQA-REVVRF-----NGLEDRVHVLPGPVETVE------------ 145 (376)
T ss_dssp EEEEETCTTSHHHHHHHH-TT-CSEEEEEECSTTHHHH-HHHHHH-----TTCTTTEEEEESCTTTCC------------
T ss_pred EEEEeCCCccHHHHHHHH-hC-CCEEEEEeChHHHHHH-HHHHHH-----cCCCceEEEEeeeeeeec------------
Confidence 799999999999887765 32 4589999976421000 000000 00011 2 4577877632
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHH-hhhhccCCCcEEE
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL-VSLFIVRPEGHFV 446 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~-~al~~Lr~GG~fV 446 (621)
-+.+||+|+|...-..-..+. .+..++ ..-++|+|||.++
T Consensus 146 -lpe~~DvivsE~~~~~l~~e~---------~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 -LPEQVDAIVSEWMGYGLLHES---------MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -CSSCEEEEECCCCBTTBTTTC---------SHHHHHHHHHHHEEEEEEEE
T ss_pred -CCccccEEEeecccccccccc---------hhhhHHHHHHhhCCCCceEC
Confidence 256899999975322211111 112222 2347899999876
No 259
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=95.28 E-value=0.036 Score=60.95 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=68.1
Q ss_pred CcccEEEecCCCCCCCChh---hhHHHHHHHHHHHH-HHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQEN---IQEILSKRLYLCQF-LVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~---~d~~~~~~L~l~~l-~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
.++|+|..|+.-.--.++= .||+ +.+.-| .-|+..|+|||++|+|-|.--...+...+..+.+.|..+...+
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa----~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~ 295 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHA----ATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAAR 295 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHH----HHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEEC
T ss_pred CcccEEEEecCCCcccchHHHHHHHH----HHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeC
Confidence 4799999998877666552 4453 333333 4499999999999999998765567899999999999999999
Q ss_pred CCCCCCCCceeeecccC
Q psy13508 151 PNTSRPANSERYIVCKW 167 (621)
Q Consensus 151 P~aSR~~s~E~y~v~~~ 167 (621)
|+.... +.|++++-.+
T Consensus 296 p~~~~s-nTEv~~~f~~ 311 (670)
T 4gua_A 296 PDCVSS-NTEMYLIFRQ 311 (670)
T ss_dssp CTTCSB-TTCEEEEEEE
T ss_pred CCcccc-CceEEEEEEe
Confidence 985544 4899986543
No 260
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=95.25 E-value=0.038 Score=57.77 Aligned_cols=96 Identities=14% Similarity=0.077 Sum_probs=60.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++||+|||+|.++..++.+. +..+++++|+... .....+ ..++ ...||++++ .
T Consensus 196 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~--------~~~a~~----~~~v~~~~~d~~~~-------------~ 249 (358)
T 1zg3_A 196 SLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQPQV--------VGNLTG----NENLNFVGGDMFKS-------------I 249 (358)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTSEEEEEECHHH--------HSSCCC----CSSEEEEECCTTTC-------------C
T ss_pred EEEEECCCcCHHHHHHHHHC-CCCeEEEeccHHH--------Hhhccc----CCCcEEEeCccCCC-------------C
Confidence 89999999999999998764 5679999998421 111000 1223 457888752 0
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCC---CcEEEEEEcc
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRP---EGHFVCKVFD 451 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~---GG~fV~K~F~ 451 (621)
+ .+|+|++-.....-.++. ....+.-+.+.|+| ||.+++--+.
T Consensus 250 -~-~~D~v~~~~vlh~~~d~~---------~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 250 -P-SADAVLLKWVLHDWNDEQ---------SLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp -C-CCSEEEEESCGGGSCHHH---------HHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred -C-CceEEEEcccccCCCHHH---------HHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 2 489999865543221111 11122345678899 9998886554
No 261
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.19 E-value=0.022 Score=59.70 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=27.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++||+|||+|.++..++++ .+..+++.+|+..
T Consensus 182 ~v~DvGgG~G~~~~~l~~~-~p~~~~~~~dlp~ 213 (353)
T 4a6d_A 182 LMCDLGGGAGALAKECMSL-YPGCKITVFDIPE 213 (353)
T ss_dssp EEEEETCTTSHHHHHHHHH-CSSCEEEEEECHH
T ss_pred eEEeeCCCCCHHHHHHHHh-CCCceeEeccCHH
Confidence 7999999999999988875 4678999999853
No 262
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.78 E-value=0.12 Score=53.85 Aligned_cols=102 Identities=17% Similarity=0.173 Sum_probs=60.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+|||+|||+|.++..+..+. +..+++|+|+ +.- ......+... .+ ...+ ...||+.++ +
T Consensus 185 ~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~---~~--~~~v~~~~~d~~~~---------~--- 245 (374)
T 1qzz_A 185 HVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADA---GL--ADRVTVAEGDFFKP---------L--- 245 (374)
T ss_dssp EEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHT---TC--TTTEEEEECCTTSC---------C---
T ss_pred EEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhc---CC--CCceEEEeCCCCCc---------C---
Confidence 89999999999999998764 5679999998 420 0000000000 00 0012 457788752 0
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+..+|+|++......-..+.. ...+..+..+|+|||.+++--+
T Consensus 246 --~~~~D~v~~~~vl~~~~~~~~---------~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 --PVTADVVLLSFVLLNWSDEDA---------LTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp --SCCEEEEEEESCGGGSCHHHH---------HHHHHHHHHHEEEEEEEEEEEC
T ss_pred --CCCCCEEEEeccccCCCHHHH---------HHHHHHHHHhcCCCcEEEEEec
Confidence 224999999765432111111 1122245678999999998766
No 263
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=94.71 E-value=0.077 Score=54.15 Aligned_cols=118 Identities=9% Similarity=-0.076 Sum_probs=63.7
Q ss_pred eEEEeccCC--ChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCcc--ccCCC-cccccCCChhhHHHHHHHH
Q psy13508 319 YFADVCAGP--GGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFE--PYYGV-KGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 319 ~vlDLcaaP--GGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~--~~~Gv-~~~GDI~~~~~~~~l~~~v 393 (621)
.|||||||. ||.+--++.+..+.++++|+|..+. +++.....+. +...+ ..++|++++..+-.-. .+
T Consensus 81 q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~-------mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~-~~ 152 (277)
T 3giw_A 81 QFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPI-------VLTLSQGLLASTPEGRTAYVEADMLDPASILDAP-EL 152 (277)
T ss_dssp EEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHH-------HHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCH-HH
T ss_pred EEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChH-------HHHHHHHHhccCCCCcEEEEEecccChhhhhccc-cc
Confidence 799999997 6666656666667899999998652 1111000000 00012 5689999875321000 01
Q ss_pred HhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
...++......|++-+....-..+.... ..+......|+|||.|++..+..
T Consensus 153 ~~~~D~~~p~av~~~avLH~l~d~~~p~--------~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFVLDEDDAV--------GIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGSCGGGCHH--------HHHHHHHTTSCTTCEEEEEEECC
T ss_pred ccccCcCCcchHHhhhhHhcCCchhhHH--------HHHHHHHHhCCCCcEEEEEeccC
Confidence 1112211222577766554332221101 11224567899999999999875
No 264
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.62 E-value=0.1 Score=60.82 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=61.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCC-CCCCCcccCC-CCCCccccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSH-DFKLDDFFAG-PSETFEPYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~-~~~l~~~~~~-~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+|||||||+|.++.++..+.++.++++|+|+.+.. .....++... ..+. .....+ ..+||+.+..
T Consensus 724 rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr-~gl~nVefiqGDa~dLp----------- 791 (950)
T 3htx_A 724 TLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEA-CNVKSATLYDGSILEFD----------- 791 (950)
T ss_dssp EEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTC-SSCSEEEEEESCTTSCC-----------
T ss_pred EEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhh-cCCCceEEEECchHhCC-----------
Confidence 89999999999999988754345799999997520 0000000000 0000 000112 5678888632
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
.....+|+|+|-.....-..+ .....+..+.++|||| .+|+-+-
T Consensus 792 -~~d~sFDlVV~~eVLeHL~dp---------~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 792 -SRLHDVDIGTCLEVIEHMEED---------QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp -TTSCSCCEEEEESCGGGSCHH---------HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred -cccCCeeEEEEeCchhhCChH---------HHHHHHHHHHHHcCCC-EEEEEec
Confidence 124689999996654322111 1111233567899999 6666554
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=94.51 E-value=0.0085 Score=64.27 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=27.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|+++-.++.+.+...+++++|+.+
T Consensus 55 ~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~ 87 (392)
T 3axs_A 55 KVADPLSASGIRAIRFLLETSCVEKAYANDISS 87 (392)
T ss_dssp EEEESSCTTSHHHHHHHHHCSCEEEEEEECSCH
T ss_pred EEEECCCcccHHHHHHHHhCCCCCEEEEEECCH
Confidence 899999999999998887654346899999875
No 266
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.16 E-value=0.031 Score=57.14 Aligned_cols=79 Identities=22% Similarity=0.266 Sum_probs=49.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
++++ .+||+++|-||.|..++++ .++++|+|..+. .+....+ +.. .-+ ...||+.+.. .
T Consensus 21 ~~gg--~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~-------Ai~~A~~-L~~-~rv~lv~~~f~~l~---~--- 80 (285)
T 1wg8_A 21 RPGG--VYVDATLGGAGHARGILER---GGRVIGLDQDPE-------AVARAKG-LHL-PGLTVVQGNFRHLK---R--- 80 (285)
T ss_dssp CTTC--EEEETTCTTSHHHHHHHHT---TCEEEEEESCHH-------HHHHHHH-TCC-TTEEEEESCGGGHH---H---
T ss_pred CCCC--EEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHH-------HHHHHHh-hcc-CCEEEEECCcchHH---H---
Confidence 5666 8999999999999999986 589999998642 1100000 110 011 3456666422 2
Q ss_pred HHHhhcCCCcccEEEecCCCC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFS 412 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~ 412 (621)
.+.. .+-.+||.|++|.|++
T Consensus 81 ~L~~-~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 81 HLAA-LGVERVDGILADLGVS 100 (285)
T ss_dssp HHHH-TTCSCEEEEEEECSCC
T ss_pred HHHH-cCCCCcCEEEeCCccc
Confidence 2221 1235799999998764
No 267
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.08 E-value=0.23 Score=50.79 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=61.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccC-CC-cccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYY-GV-KGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~-Gv-~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
++||+|||+|.++..+..+. +..+++|+|+...-......+.. .... .+ ...||+.+..
T Consensus 168 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~~~------------ 228 (335)
T 2r3s_A 168 KVLDISASHGLFGIAVAQHN-PNAEIFGVDWASVLEVAKENARI------QGVASRYHTIAGSAFEVD------------ 228 (335)
T ss_dssp EEEEETCTTCHHHHHHHHHC-TTCEEEEEECHHHHHHHHHHHHH------HTCGGGEEEEESCTTTSC------------
T ss_pred EEEEECCCcCHHHHHHHHHC-CCCeEEEEecHHHHHHHHHHHHh------cCCCcceEEEecccccCC------------
Confidence 89999999999999998764 56799999986110000000000 0000 12 4567887632
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
. +.++|+|++-.....-..+... ..+.-+...|+|||.+++--+..
T Consensus 229 ~-~~~~D~v~~~~~l~~~~~~~~~---------~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 229 Y-GNDYDLVLLPNFLHHFDVATCE---------QLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp C-CSCEEEEEEESCGGGSCHHHHH---------HHHHHHHHHEEEEEEEEEEECCC
T ss_pred C-CCCCcEEEEcchhccCCHHHHH---------HHHHHHHHhCCCCcEEEEEeecC
Confidence 1 2349999995544322212111 11224567899999998876653
No 268
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=93.81 E-value=0.066 Score=53.16 Aligned_cols=108 Identities=10% Similarity=0.041 Sum_probs=62.4
Q ss_pred chhHhhhhhCCCCCCceeeccccccc---------cccccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCC
Q psy13508 19 SWIVEGDKKLSIDNETKFCSPNLLKN---------VLQCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSV 88 (621)
Q Consensus 19 ~W~Qva~~~~~~~~~~~~~~~~l~~~---------~~~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~ 88 (621)
+|++.+++.++. ++.+++.|.-... -..++. +.||++.+..... -..++|+|+||+++
T Consensus 89 ~~t~~la~~v~~-~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~---------~~~~~D~I~~d~a~-- 156 (232)
T 3id6_C 89 TTISHVSDIIEL-NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKS---------VVENVDVLYVDIAQ-- 156 (232)
T ss_dssp HHHHHHHHHHTT-TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTT---------TCCCEEEEEECCCC--
T ss_pred HHHHHHHHHhCC-CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhc---------cccceEEEEecCCC--
Confidence 578888888765 5667776654421 113454 6899887643211 13479999999986
Q ss_pred CCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC-------CcChHHHHHHHHc-ccceeEEe
Q psy13508 89 EGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF-------TPFSAGLLYLLYR-SYKQVCIF 149 (621)
Q Consensus 89 sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~-------~~~~~~l~~~l~~-~F~~v~~~ 149 (621)
.++. .+. ...+.++|+|||.||+-+..+. ++-+......|+. -|+-+...
T Consensus 157 -----~~~~---~il---~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 157 -----PDQT---DIA---IYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp -----TTHH---HHH---HHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred -----hhHH---HHH---HHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 1221 111 2345668999999998765442 1123344455544 36666555
No 269
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=93.67 E-value=0.06 Score=55.52 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=30.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++++ ++||+|||+||++.+++.+.. .++++|+|..+
T Consensus 25 ~~g~--~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~ 60 (301)
T 1m6y_A 25 EDEK--IILDCTVGEGGHSRAILEHCP-GCRIIGIDVDS 60 (301)
T ss_dssp CTTC--EEEETTCTTSHHHHHHHHHCT-TCEEEEEESCH
T ss_pred CCCC--EEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCH
Confidence 4565 899999999999999998754 68999999874
No 270
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=93.66 E-value=0.031 Score=56.88 Aligned_cols=34 Identities=12% Similarity=-0.033 Sum_probs=24.0
Q ss_pred ceEEEeccCCCh----hHHHHHHhcCC---CCeEEEEecCC
Q psy13508 318 LYFADVCAGPGG----FSEYVLYRKKW---RAKGIGFTLTG 351 (621)
Q Consensus 318 ~~vlDLcaaPGG----wsqyl~~r~~~---~~k~~GvdL~~ 351 (621)
.+++|+|||+|- .+-.+.+..+. ..+++|+|+.+
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~ 147 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT 147 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH
Confidence 489999999998 33334444332 35899999975
No 271
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.66 E-value=0.048 Score=52.28 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=30.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+++. +|||+|||+|.++.++..+ .+.++++|+|+.+
T Consensus 26 ~~~~--~vLDiGcG~G~~~~~la~~-~p~~~v~gvD~s~ 61 (218)
T 3mq2_A 26 QYDD--VVLDVGTGDGKHPYKVARQ-NPSRLVVALDADK 61 (218)
T ss_dssp TSSE--EEEEESCTTCHHHHHHHHH-CTTEEEEEEESCG
T ss_pred cCCC--EEEEecCCCCHHHHHHHHH-CCCCEEEEEECCH
Confidence 3454 8999999999999999875 4578999999975
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=93.46 E-value=0.022 Score=60.76 Aligned_cols=32 Identities=6% Similarity=-0.119 Sum_probs=27.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|+++-.++.+.+ ..+++++|+.+
T Consensus 50 ~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~ 81 (378)
T 2dul_A 50 IVLDALSATGIRGIRFALETP-AEEVWLNDISE 81 (378)
T ss_dssp EEEESSCTTSHHHHHHHHHSS-CSEEEEEESCH
T ss_pred EEEECCCchhHHHHHHHHhCC-CCeEEEEECCH
Confidence 799999999999998887753 46799999975
No 273
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=93.39 E-value=0.061 Score=52.71 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=29.9
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++++ +|||+|||+|.++.++..+ .+.++++|+|+.+
T Consensus 23 ~~~~--~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~ 58 (225)
T 3p2e_A 23 QFDR--VHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVK 58 (225)
T ss_dssp TCSE--EEEEETCTTSHHHHHHHHT-CTTEEEEEECSCC
T ss_pred CCCC--EEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCH
Confidence 4455 8999999999999998864 4578999999984
No 274
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.63 E-value=0.068 Score=57.86 Aligned_cols=110 Identities=16% Similarity=0.124 Sum_probs=60.5
Q ss_pred eEEEeccCCChhHHHHHHhcC------------CCCeEEEEecCCCCCCCCCcccCCCCCCccccCC------CcccccC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKK------------WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG------VKGNGDV 380 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~------------~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G------v~~~GDI 380 (621)
+|+|.|||.|||.-.+.++.. ....++|+|+.+.- +.....++ ...| -...||.
T Consensus 174 ~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~-------~~lA~~nl-~l~g~~~~~~~i~~gD~ 245 (445)
T 2okc_A 174 TVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLV-------VTLASMNL-YLHGIGTDRSPIVCEDS 245 (445)
T ss_dssp CEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHH-------HHHHHHHH-HHTTCCSSCCSEEECCT
T ss_pred EEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHH-------HHHHHHHH-HHhCCCcCCCCEeeCCC
Confidence 799999999999988776531 23679999987420 00000000 0011 1245666
Q ss_pred CChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhh----HHH--HHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 381 YDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENI----QEI--LSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 381 ~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~----de~--~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
.... ...++|+|+++-.+........ +.. ......++-+..++.+|+|||.+++=+
T Consensus 246 l~~~-------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 246 LEKE-------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp TTSC-------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCc-------------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 5421 1237999999854433211100 000 001112333446678999999987776
No 275
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=92.50 E-value=0.81 Score=48.06 Aligned_cols=101 Identities=6% Similarity=-0.098 Sum_probs=58.6
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC---C-cccccCCChhhHHHHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG---V-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G---v-~~~GDI~~~~~~~~l~~~v~ 394 (621)
+|||+| |+|.++..+..+ ++.++++|+|+.+. .+....++.. ..| + ...||+.+. +.
T Consensus 175 ~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~-------~l~~a~~~~~-~~g~~~v~~~~~D~~~~---------l~ 235 (373)
T 2qm3_A 175 DIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDER-------LTKFIEKAAN-EIGYEDIEIFTFDLRKP---------LP 235 (373)
T ss_dssp EEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHH-------HHHHHHHHHH-HHTCCCEEEECCCTTSC---------CC
T ss_pred EEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHH-------HHHHHHHHHH-HcCCCCEEEEEChhhhh---------ch
Confidence 899999 999999988764 45579999998642 0000000000 011 2 457788762 00
Q ss_pred hhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEE-EEEEcc
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHF-VCKVFD 451 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~f-V~K~F~ 451 (621)
.. ....+|+|++|...... . + ..-+..+.++|+|||.+ ++=+..
T Consensus 236 ~~-~~~~fD~Vi~~~p~~~~------~-----~-~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 236 DY-ALHKFDTFITDPPETLE------A-----I-RAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp TT-TSSCBSEEEECCCSSHH------H-----H-HHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hh-ccCCccEEEECCCCchH------H-----H-HHHHHHHHHHcccCCeEEEEEEec
Confidence 00 13479999999633221 0 1 22233678899999954 444443
No 276
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=92.24 E-value=0.13 Score=50.61 Aligned_cols=78 Identities=10% Similarity=0.084 Sum_probs=47.8
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
.+++ +|||+|||+|+++.++..+ + ++++|+|+.+.. .....+.+.....+ ...||+.+...
T Consensus 28 ~~~~--~VLDiG~G~G~~~~~l~~~-~--~~v~~id~~~~~-------~~~a~~~~~~~~~v~~~~~D~~~~~~------ 89 (245)
T 1yub_A 28 KETD--TVYEIGTGKGHLTTKLAKI-S--KQVTSIELDSHL-------FNLSSEKLKLNTRVTLIHQDILQFQF------ 89 (245)
T ss_dssp CSSE--EEEECSCCCSSCSHHHHHH-S--SEEEESSSSCSS-------SSSSSCTTTTCSEEEECCSCCTTTTC------
T ss_pred CCCC--EEEEEeCCCCHHHHHHHHh-C--CeEEEEECCHHH-------HHHHHHHhccCCceEEEECChhhcCc------
Confidence 4455 8999999999999999876 2 789999987531 11111111111112 45788876320
Q ss_pred HHHhhcCCCcccEEEecCCCCCC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVE 414 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~ 414 (621)
..+..+ .|+++-..+.+
T Consensus 90 -----~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 90 -----PNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp -----CCSSEE-EEEEECCSSSC
T ss_pred -----ccCCCc-EEEEeCCcccc
Confidence 012467 78888765554
No 277
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=91.79 E-value=1 Score=47.43 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=27.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+||+|||+|+++..+..+ ...++++|+|+.+
T Consensus 220 ~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~ 251 (373)
T 3tm4_A 220 SVLDPMCGSGTILIELALR-RYSGEIIGIEKYR 251 (373)
T ss_dssp CEEETTCTTCHHHHHHHHT-TCCSCEEEEESCH
T ss_pred EEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCH
Confidence 7999999999999988874 3446899999875
No 278
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=91.75 E-value=0.21 Score=49.82 Aligned_cols=108 Identities=9% Similarity=0.037 Sum_probs=59.2
Q ss_pred cc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCC-CChhhhHHHHHHH------HHHHHHHHHHhcCCCCEE
Q psy13508 49 VK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE-GQENIQEILSKRL------YLCQFLVSLFIVRPEGHF 120 (621)
Q Consensus 49 v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~s-G~~~~d~~~~~~L------~l~~l~~A~~~L~~gG~f 120 (621)
++ .+||+.+.... .....+....+|+|+++--.... +..+.++.+...+ ...-+..+..+|+|||.|
T Consensus 92 v~~~~~D~~~~~~~-----~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 166 (260)
T 2ozv_A 92 IEVLEADVTLRAKA-----RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQL 166 (260)
T ss_dssp EEEEECCTTCCHHH-----HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEE
T ss_pred EEEEeCCHHHHhhh-----hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEE
Confidence 44 68999875211 11111234579999999443333 3333333222111 122345688999999999
Q ss_pred EEeEccCCCcChHHHHHHHHcccceeEEecCCCCCCCCceeeec
Q psy13508 121 VCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIV 164 (621)
Q Consensus 121 V~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aSR~~s~E~y~v 164 (621)
++ ++... ...+++..+++.|..+...............+++
T Consensus 167 ~~-~~~~~--~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv 207 (260)
T 2ozv_A 167 SL-ISRPQ--SVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLV 207 (260)
T ss_dssp EE-EECGG--GHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEE
T ss_pred EE-EEcHH--HHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEE
Confidence 98 55553 5677888888778877776554444445556654
No 279
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=91.28 E-value=0.27 Score=46.32 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=43.3
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|||+|||+|.++.++..+ ...+++|+|+.+. +.....++.. .+ ...||+.+.
T Consensus 54 ~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~-------~~~~a~~~~~---~~~~~~~d~~~~-------------- 107 (200)
T 1ne2_A 54 SVIDAGTGNGILACGSYLL--GAESVTAFDIDPD-------AIETAKRNCG---GVNFMVADVSEI-------------- 107 (200)
T ss_dssp EEEEETCTTCHHHHHHHHT--TBSEEEEEESCHH-------HHHHHHHHCT---TSEEEECCGGGC--------------
T ss_pred EEEEEeCCccHHHHHHHHc--CCCEEEEEECCHH-------HHHHHHHhcC---CCEEEECcHHHC--------------
Confidence 8999999999999998875 3458999998642 0000000000 22 346676641
Q ss_pred CCCcccEEEecCCCCC
Q psy13508 398 KGRGVHFMMADGGFSV 413 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~ 413 (621)
+..+|+|++|..+..
T Consensus 108 -~~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 108 -SGKYDTWIMNPPFGS 122 (200)
T ss_dssp -CCCEEEEEECCCC--
T ss_pred -CCCeeEEEECCCchh
Confidence 247999999976544
No 280
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=91.25 E-value=0.2 Score=52.50 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=33.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+||+ .+||.++|-||.|..++++.++.++++|+|.-+
T Consensus 56 ~pgg--iyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp 92 (347)
T 3tka_A 56 RPDG--IYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDP 92 (347)
T ss_dssp CTTC--EEEESCCTTSHHHHHHHTTCCTTCEEEEEESCH
T ss_pred CCCC--EEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCH
Confidence 6777 799999999999999999888899999999864
No 281
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=90.79 E-value=0.87 Score=54.02 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=68.1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE-ccCCCCChHHHHHHHHhccceeEeecC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV-FDMFTPFSAGLLYLLYRSYKQVCIFKP 476 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~-F~~~~~~s~~ll~~l~~~F~~V~i~KP 476 (621)
.-+.+.+|-||----..|..+... +.++..+++..|+++.-+||++|+|+ |-+.+ .=..+...+...|..+++.||
T Consensus 571 pTGtf~fVYSDVDQV~d~~~Dl~A--s~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~-vw~~if~~~~~~~~~~~i~KP 647 (1299)
T 3iyl_W 571 PTGTFGLVYADLDQVEDAGTDMPA--ANRAAIAMLGTALQMTTAGGVSVLKVNFPTRA-FWTQVFNLYATHATTLHLVKP 647 (1299)
T ss_dssp CCCCEEEEEECCCCC-----CCHH--HHHHHHHHHHHHHHHEEEEEEEEEEESCCCTT-HHHHHHHHTTTTCSCEEEEEC
T ss_pred CCCceEEEEecchhhccCCcchhh--hhHHHHHHHHHHHHhhcCCceEEEEEcCCchH-HHHHHHHHhcchhheeeeecc
Confidence 456899999996444444444443 47788888999999999999999999 43322 223455556677999999999
Q ss_pred CCCCCCCceEEEEEeecCC
Q psy13508 477 NTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 477 ~aSR~~ssE~YlVc~g~~~ 495 (621)
-=+ .|.|+|+|.-++..
T Consensus 648 li~--NnvEvf~v~~~r~~ 664 (1299)
T 3iyl_W 648 TIV--NSSEVFLVFGGRQS 664 (1299)
T ss_dssp CSS--SCCCEEEEESCCCT
T ss_pred eee--cceEEEEEEeeecc
Confidence 865 78999999988764
No 282
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=90.59 E-value=0.16 Score=49.35 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=26.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|+++.++..+ .++++|+|+.+
T Consensus 81 ~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~ 110 (241)
T 3gdh_A 81 VVVDAFCGVGGNTIQFALT---GMRVIAIDIDP 110 (241)
T ss_dssp EEEETTCTTSHHHHHHHHT---TCEEEEEESCH
T ss_pred EEEECccccCHHHHHHHHc---CCEEEEEECCH
Confidence 8999999999999999874 38999999874
No 283
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=90.33 E-value=0.49 Score=52.64 Aligned_cols=114 Identities=18% Similarity=0.148 Sum_probs=61.6
Q ss_pred eEEEeccCCChhHHHHHHhcCC-----------------CCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-------
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKW-----------------RAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV------- 374 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~-----------------~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv------- 374 (621)
+|+|.|||.|||.-.+..+... ...++|+|+.+.- +.+-. .++ ...|+
T Consensus 172 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~-~~lA~------~nl-~l~gi~~~~~~~ 243 (541)
T 2ar0_A 172 VVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT-RRLAL------MNC-LLHDIEGNLDHG 243 (541)
T ss_dssp CEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH-HHHHH------HHH-HTTTCCCBGGGT
T ss_pred eEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH-HHHHH------HHH-HHhCCCcccccc
Confidence 7999999999999877665321 2479999987420 00000 000 01111
Q ss_pred --cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchh-hHH--HHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 375 --KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQEN-IQE--ILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 375 --~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~-~de--~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
...||...... ....++|+|+++--+....... ... .-.....++-+.-++..|+|||.+++=+
T Consensus 244 ~~I~~gDtL~~~~-----------~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 244 GAIRLGNTLGSDG-----------ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp BSEEESCTTSHHH-----------HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeEeCCCccccc-----------ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 24566654321 1245799999985443321100 000 0001223344556788999999877766
Q ss_pred cc
Q psy13508 450 FD 451 (621)
Q Consensus 450 F~ 451 (621)
-.
T Consensus 313 p~ 314 (541)
T 2ar0_A 313 PD 314 (541)
T ss_dssp EH
T ss_pred cC
Confidence 43
No 284
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=90.31 E-value=0.44 Score=51.17 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=51.4
Q ss_pred hhHhhhhhCCCCCCceeecccc-ccc-cccccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhH
Q psy13508 20 WIVEGDKKLSIDNETKFCSPNL-LKN-VLQCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQE 96 (621)
Q Consensus 20 W~Qva~~~~~~~~~~~~~~~~l-~~~-~~~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~ 96 (621)
+.+.+.+..+ ...+++.|.- .|. ....++ .+||+.+....+.+.+. ..++|+|+||++.. ..|.
T Consensus 237 Sl~la~~~fP--~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~------d~sFDlVisdgsH~-----~~d~ 303 (419)
T 3sso_A 237 SLRMWKSFFP--RGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARR------YGPFDIVIDDGSHI-----NAHV 303 (419)
T ss_dssp HHHHHHHHCT--TCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHH------HCCEEEEEECSCCC-----HHHH
T ss_pred HHHHHHHhCC--CCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcc------cCCccEEEECCccc-----chhH
Confidence 3344444433 2345544443 332 123455 69999997765554332 24799999998642 1221
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 97 ILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 97 ~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
...+.-+.++|||||.||+.-+.
T Consensus 304 -------~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 304 -------RTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp -------HHHHHHHGGGEEEEEEEEEECGG
T ss_pred -------HHHHHHHHHhcCCCeEEEEEecc
Confidence 22456678999999999997443
No 285
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=90.13 E-value=0.34 Score=47.92 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=28.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|.++.+++.+. ++++|+|+.+
T Consensus 29 ~~~~--~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~ 62 (244)
T 1qam_A 29 NEHD--NIFEIGSGKGHFTLELVQRC---NFVTAIEIDH 62 (244)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHHS---SEEEEECSCH
T ss_pred CCCC--EEEEEeCCchHHHHHHHHcC---CeEEEEECCH
Confidence 3455 89999999999999999862 7899999864
No 286
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=89.77 E-value=0.42 Score=48.39 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=28.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|.++.+++.+ .++++|+|+.+
T Consensus 27 ~~~~--~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~ 60 (285)
T 1zq9_A 27 RPTD--VVLEVGPGTGNMTVKLLEK---AKKVVACELDP 60 (285)
T ss_dssp CTTC--EEEEECCTTSTTHHHHHHH---SSEEEEEESCH
T ss_pred CCCC--EEEEEcCcccHHHHHHHhh---CCEEEEEECCH
Confidence 4455 8999999999999999886 36899999864
No 287
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=89.66 E-value=0.36 Score=49.02 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=29.7
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCC-CCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKW-RAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~-~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|..+..++.+... .++++|+|+.+
T Consensus 41 ~~~~--~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~ 78 (279)
T 3uzu_A 41 ERGE--RMVEIGPGLGALTGPVIARLATPGSPLHAVELDR 78 (279)
T ss_dssp CTTC--EEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH
T ss_pred CCcC--EEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH
Confidence 4455 8999999999999999987533 35699999864
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=89.55 E-value=0.67 Score=53.84 Aligned_cols=136 Identities=10% Similarity=-0.019 Sum_probs=71.3
Q ss_pred eEEEeccCCChhHHHHHHhcC--CCCeEEEEecCCCCCCCCC--cccCCCCCCccccCCC---c-ccccCCChhhHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKK--WRAKGIGFTLTGSHDFKLD--DFFAGPSETFEPYYGV---K-GNGDVYDPENILSLH 390 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~--~~~k~~GvdL~~~~~~~l~--~~~~~~~~~~~~~~Gv---~-~~GDI~~~~~~~~l~ 390 (621)
+|+|.|||.|+|.-.+..+.+ ...+++|+|+.+.. +.+- ++-.. .+. ...|+ . ..+|+.++..
T Consensus 324 rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~A-l~LAK~RlNL~--lN~-LlhGi~~~~I~~dD~L~~~~----- 394 (878)
T 3s1s_A 324 VISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLF-LELLSIRLGLL--FPQ-LVSSNNAPTITGEDVCSLNP----- 394 (878)
T ss_dssp EEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGG-HHHHHHHHHTT--STT-TCBTTBCCEEECCCGGGCCG-----
T ss_pred EEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHH-HHHHHHHHHHH--Hhh-hhcCCCcceEEecchhcccc-----
Confidence 899999999999998877653 24679999987521 0000 00000 000 01121 1 1234443210
Q ss_pred HHHHhhcCCCcccEEEecCCCCCC-CchhhHHHHHH-----------------HHHHHHHHhhhhccCCCcEEEEEEccC
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVE-GQENIQEILSK-----------------RLYLCQFLVSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~-G~~~~de~~~~-----------------~L~l~~l~~al~~Lr~GG~fV~K~F~~ 452 (621)
....++|+|+++=-+... ........... .+...=+..|+.+|++||.+++=+=.+
T Consensus 395 ------~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 395 ------EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp ------GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred ------cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 123579999998443221 11111111111 123333447889999999988777553
Q ss_pred CC----CChHHHHHHHHhccc
Q psy13508 453 FT----PFSAGLLYLLYRSYK 469 (621)
Q Consensus 453 ~~----~~s~~ll~~l~~~F~ 469 (621)
+- .....+...|...+.
T Consensus 469 ~Lf~sg~~~kkLRk~LLe~~~ 489 (878)
T 3s1s_A 469 YLTAQGNESKAFREFLVGNFG 489 (878)
T ss_dssp HHHCCSHHHHHHHHHHTTTTC
T ss_pred HhccCChHHHHHHHHHHhCCC
Confidence 21 124567666655544
No 289
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=89.26 E-value=0.67 Score=54.59 Aligned_cols=91 Identities=16% Similarity=0.202 Sum_probs=70.4
Q ss_pred cCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHH----HHHHhccceeE
Q psy13508 397 TKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLL----YLLYRSYKQVC 472 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll----~~l~~~F~~V~ 472 (621)
+.-+.+-+|-||----+.|..+.+.. .+...+++..|+++.-+||.+|+|+==. +..+- ......|...+
T Consensus 566 ~pTGtf~fVYSDvDQV~dgg~Dl~Aa--sr~~~~~l~~~l~~tt~GG~~VvKiNFP----T~~~W~~lf~~~~~~~~s~~ 639 (1289)
T 1ej6_A 566 FPSGDYQFVYSDVDQVVDGHDDLSIS--SGLVESLLSSCMHATAPGGSFVVKINFP----TRPVWHYIEQKILPNITSYM 639 (1289)
T ss_dssp CSCCCEEEEEECCCCCCSSSTTHHHH--HHHHHHHHHHHHHHEEEEEEEEEEESSC----CHHHHHHHHHHTGGGEEEEE
T ss_pred CCCcceEEEEechhhhhcCCCcchhh--HHHHHHHHHHHHHhhccCceEEEEEcCC----ChHHHHHHHHhhccccceee
Confidence 34567899999986666677777654 7788888889999999999999999432 33333 33345588999
Q ss_pred eecCCCCCCCCceEEEEEeecCC
Q psy13508 473 IFKPNTSRPANSERYIVCKWKRP 495 (621)
Q Consensus 473 i~KP~aSR~~ssE~YlVc~g~~~ 495 (621)
++||-=. .|.|+|+||-|+..
T Consensus 640 lvKP~Iv--NnvEvflv~~~r~~ 660 (1289)
T 1ej6_A 640 LIKPFVT--NNVELFFVAFGVHQ 660 (1289)
T ss_dssp EEEEESS--SSCCEEEEEEEESC
T ss_pred eecceee--cceEEEEEEEeeec
Confidence 9999754 78999999999874
No 290
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=89.12 E-value=0.37 Score=47.66 Aligned_cols=89 Identities=7% Similarity=0.006 Sum_probs=48.1
Q ss_pred CCcccEEEecCCCCCC---CChhhhHHHHHH------HHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccc
Q psy13508 74 GRGVHFMMADGGFSVE---GQENIQEILSKR------LYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYK 144 (621)
Q Consensus 74 ~~~~dlVlsDgapn~s---G~~~~d~~~~~~------L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~ 144 (621)
..++|+|++|...... |..+.+..+... -....+..+..+|+|||.|++ ++... ...+++..+++..-
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~--~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPE--RLLDIIDIMRKYRL 193 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTT--THHHHHHHHHHTTE
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHH--HHHHHHHHHHHCCC
Confidence 4689999998554333 333332221111 112234668899999999999 55553 66788888876533
Q ss_pred eeEEecCCCCCCCCceeeecc
Q psy13508 145 QVCIFKPNTSRPANSERYIVC 165 (621)
Q Consensus 145 ~v~~~KP~aSR~~s~E~y~v~ 165 (621)
.++...|-.+++.....++++
T Consensus 194 ~~~~~~~v~~~~~~~~~~~l~ 214 (259)
T 3lpm_A 194 EPKRIQFVHPRSDREANTVLV 214 (259)
T ss_dssp EEEEEEEEESSTTSCCSEEEE
T ss_pred ceEEEEEeecCCCCCcEEEEE
Confidence 344444555555555544433
No 291
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=89.05 E-value=2.4 Score=44.83 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=67.4
Q ss_pred cceEEEeccCCChhHHHHHH--------hc------CCCCeEEEEecCCCCCCC-----CCcccCC-------CCCCccc
Q psy13508 317 LLYFADVCAGPGGFSEYVLY--------RK------KWRAKGIGFTLTGSHDFK-----LDDFFAG-------PSETFEP 370 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~--------r~------~~~~k~~GvdL~~~~~~~-----l~~~~~~-------~~~~~~~ 370 (621)
.++++|||||.|..|-.+.. +. .+.-.++..||.+ |||+ ++.+... ......+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~-NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPS-NDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTT-SCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCc-cchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 46999999999999886522 11 1467899999975 4532 1111100 0000011
Q ss_pred cCCCcccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCc-h-hh----------H------------HH--HH
Q psy13508 371 YYGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQ-E-NI----------Q------------EI--LS 424 (621)
Q Consensus 371 ~~Gv~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~-~-~~----------d------------e~--~~ 424 (621)
+|-.-..|-++. +.+....+|+|.|=.+..+--+ + .. + +. .|
T Consensus 132 ~f~~gvpgSFy~------------rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Q 199 (374)
T 3b5i_A 132 YFVAGVPGSFYR------------RLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQ 199 (374)
T ss_dssp SEEEEEESCTTS------------CCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHH
T ss_pred eEEEecChhhhc------------ccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHH
Confidence 221112344443 1234678999999888665321 1 00 0 00 12
Q ss_pred HHHHHHHHH-hhhhccCCCcEEEEEEccC
Q psy13508 425 KRLYLCQFL-VSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 425 ~~L~l~~l~-~al~~Lr~GG~fV~K~F~~ 452 (621)
.+-.+..++ .-.+.|+|||.||+-+...
T Consensus 200 f~~D~~~fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 200 FQADLAEFLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 222333333 4567899999999999864
No 292
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=88.62 E-value=0.57 Score=48.04 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=48.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-cccccCCChhhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~ 391 (621)
.+++ +|||+|||+|.++.+++.+ .++++|+|+.+. +.....+.+.....+ ...||+.+...
T Consensus 49 ~~~~--~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~-------li~~a~~~~~~~~~v~vi~gD~l~~~~------ 110 (295)
T 3gru_A 49 TKDD--VVLEIGLGKGILTEELAKN---AKKVYVIEIDKS-------LEPYANKLKELYNNIEIIWGDALKVDL------ 110 (295)
T ss_dssp CTTC--EEEEECCTTSHHHHHHHHH---SSEEEEEESCGG-------GHHHHHHHHHHCSSEEEEESCTTTSCG------
T ss_pred CCcC--EEEEECCCchHHHHHHHhc---CCEEEEEECCHH-------HHHHHHHHhccCCCeEEEECchhhCCc------
Confidence 4565 8999999999999999986 478999998642 111000111111122 45788876321
Q ss_pred HHHhhcCCCcccEEEecCCCCC
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSV 413 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~ 413 (621)
....+|+|++....+.
T Consensus 111 ------~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 111 ------NKLDFNKVVANLPYQI 126 (295)
T ss_dssp ------GGSCCSEEEEECCGGG
T ss_pred ------ccCCccEEEEeCcccc
Confidence 1235899998876544
No 293
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=88.59 E-value=0.28 Score=50.13 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=28.4
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|.++..++.+ .++++|+|+.+
T Consensus 41 ~~~~--~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~ 74 (299)
T 2h1r_A 41 KSSD--IVLEIGCGTGNLTVKLLPL---AKKVITIDIDS 74 (299)
T ss_dssp CTTC--EEEEECCTTSTTHHHHTTT---SSEEEEECSCH
T ss_pred CCcC--EEEEEcCcCcHHHHHHHhc---CCEEEEEECCH
Confidence 4455 8999999999999999875 46899999864
No 294
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=88.47 E-value=0.3 Score=47.86 Aligned_cols=32 Identities=6% Similarity=-0.176 Sum_probs=27.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++||+|||+|+++..++.+. +.++++|+|+.+
T Consensus 68 ~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~ 99 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATL-NGWYFLATEVDD 99 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHH-HCCEEEEEESCH
T ss_pred EEEEeCCChhHHHHHHHHhC-CCCeEEEEECCH
Confidence 89999999999999888754 357999999874
No 295
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=86.97 E-value=0.39 Score=47.86 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=29.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|.++..++.+ ..++++|+|+.+
T Consensus 30 ~~~~--~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~ 64 (249)
T 3ftd_A 30 EEGN--TVVEVGGGTGNLTKVLLQH--PLKKLYVIELDR 64 (249)
T ss_dssp CTTC--EEEEEESCHHHHHHHHTTS--CCSEEEEECCCH
T ss_pred CCcC--EEEEEcCchHHHHHHHHHc--CCCeEEEEECCH
Confidence 3455 8999999999999999875 357999999864
No 296
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=86.85 E-value=0.58 Score=46.82 Aligned_cols=34 Identities=12% Similarity=0.256 Sum_probs=28.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|..+..++.+ .++++|+|+.+
T Consensus 28 ~~~~--~VLEIG~G~G~lt~~La~~---~~~V~avEid~ 61 (255)
T 3tqs_A 28 QKTD--TLVEIGPGRGALTDYLLTE---CDNLALVEIDR 61 (255)
T ss_dssp CTTC--EEEEECCTTTTTHHHHTTT---SSEEEEEECCH
T ss_pred CCcC--EEEEEcccccHHHHHHHHh---CCEEEEEECCH
Confidence 4455 8999999999999999875 37899999864
No 297
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=86.07 E-value=2.8 Score=42.89 Aligned_cols=153 Identities=11% Similarity=0.079 Sum_probs=83.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCC-CcccCC-CCCCccccCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKL-DDFFAG-PSETFEPYYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l-~~~~~~-~~~~~~~~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
+||=+|.|-||....+++.. +..++..+++-+.- +++ .++++. ....+. ..-+ -..||-.. ++.+
T Consensus 86 ~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~V-v~~a~~~lp~~~~~~~~-dpRv~v~~~Dg~~---------~l~~ 153 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGV-VSFCRQYLPNHNAGSYD-DPRFKLVIDDGVN---------FVNQ 153 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHH-HHHHHHHCHHHHTTGGG-CTTEEEEESCTTT---------TTSC
T ss_pred eEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHH-HHHHHhcCccccccccC-CCcEEEEechHHH---------HHhh
Confidence 79999999999999888643 34678888875420 000 001000 000000 0001 12344432 1211
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHH-HHhhhhccCCCcEEEEEEccCC--CCChHHHHHHHHhccceeE
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVC 472 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~-l~~al~~Lr~GG~fV~K~F~~~--~~~s~~ll~~l~~~F~~V~ 472 (621)
...++|+|+.|..-. .|.... |.-.+ ...+.+.|+|||.||+-.=..+ ......++..|+..|..|.
T Consensus 154 --~~~~yDvIi~D~~dp-~~~~~~-------L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3o4f_A 154 --TSQTFDVIISDCTDP-IGPGES-------LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp --SSCCEEEEEESCCCC-CCTTCC-------SSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEE
T ss_pred --ccccCCEEEEeCCCc-CCCchh-------hcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCcee
Confidence 256899999997433 232210 11111 1135678999999998653321 1123345566888899887
Q ss_pred eecC-CCCCCCCceEEEEEeec
Q psy13508 473 IFKP-NTSRPANSERYIVCKWK 493 (621)
Q Consensus 473 i~KP-~aSR~~ssE~YlVc~g~ 493 (621)
.+-. ..|=++.-=.|.+|..-
T Consensus 224 ~~~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 224 FYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp EEEECCTTSSSSCEEEEEEESC
T ss_pred eeeeeeccCCCcceeheeEECC
Confidence 7643 34556666678888754
No 298
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=84.75 E-value=1.2 Score=46.25 Aligned_cols=89 Identities=11% Similarity=0.032 Sum_probs=54.2
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC-cChHHHHHHHHcccceeEEec-C
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-PFSAGLLYLLYRSYKQVCIFK-P 151 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~-~~~~~l~~~l~~~F~~v~~~K-P 151 (621)
..++|+|++|..... +.. .+..+ ..-+..+.++|+|||.||+-...... .....++..+++.|..|..|. |
T Consensus 157 ~~~fDvIi~D~~~~~-~~~--~~L~t----~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~ 229 (317)
T 3gjy_A 157 PASRDVIIRDVFAGA-ITP--QNFTT----VEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADP 229 (317)
T ss_dssp TTCEEEEEECCSTTS-CCC--GGGSB----HHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECH
T ss_pred CCCCCEEEECCCCcc-ccc--hhhhH----HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEec
Confidence 467999999964332 222 11000 11235567899999999999976531 123577888999999999884 2
Q ss_pred CCCCC-CCceeeecccCCC
Q psy13508 152 NTSRP-ANSERYIVCKWKR 169 (621)
Q Consensus 152 ~aSR~-~s~E~y~v~~~~~ 169 (621)
..++. ...-.+++|....
T Consensus 230 ~~~~g~~~gN~Vl~As~~p 248 (317)
T 3gjy_A 230 PMLKGRRYGNIILMGSDTE 248 (317)
T ss_dssp HHHTTSSCEEEEEEEESSC
T ss_pred CCCCCCcCceEEEEEECCC
Confidence 22222 2223445666443
No 299
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=83.93 E-value=0.81 Score=51.04 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=27.2
Q ss_pred ceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 318 LYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 318 ~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|||+|||.|-+|+.+.++ .+.|.|+|+.+
T Consensus 68 ~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~ 98 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASK---GATIVGIDFQQ 98 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHT---TCEEEEEESCH
T ss_pred CeEEEECCCCcHHHHHHHhC---CCEEEEECCCH
Confidence 38999999999999998864 58999999974
No 300
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=83.18 E-value=0.33 Score=55.03 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=57.6
Q ss_pred cceEEEeccCCChhHHHHH---HhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCChhhHHHHHH
Q psy13508 317 LLYFADVCAGPGGFSEYVL---YRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDPENILSLHE 391 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~---~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~~~~~~l~~ 391 (621)
...|+|+|||.|--+..++ .+.+...+|+||.-+++....+.. . ......+ | -++||+.+.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~-v-----~~N~~~dkVtVI~gd~eev~------- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLEN-W-----QFEEWGSQVTVVSSDMREWV------- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHH-H-----HHHTTGGGEEEEESCTTTCC-------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHH-H-----HhccCCCeEEEEeCcceecc-------
Confidence 3489999999998866554 333444589999876431100000 0 0000011 2 4688988743
Q ss_pred HHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEE
Q psy13508 392 FVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 392 ~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
-+++||+|+|.---.. -.-|. .+.-+..+-+.|||||.++
T Consensus 425 ------LPEKVDIIVSEwMG~f----Ll~E~-----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 425 ------APEKADIIVSELLGSF----ADNEL-----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ------CSSCEEEEECCCCBTT----BGGGC-----HHHHHHHHGGGEEEEEEEE
T ss_pred ------CCcccCEEEEEcCccc----ccccC-----CHHHHHHHHHhcCCCcEEc
Confidence 2679999999942222 11121 1111235568999999864
No 301
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=82.52 E-value=1.1 Score=41.05 Aligned_cols=64 Identities=6% Similarity=0.007 Sum_probs=43.7
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
.++|+|+++..... ..+ .....+.-+.++|+|||.+++-.+... ...++...+++.|..+..++
T Consensus 118 ~~~D~v~~~~~~~~----~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 118 RKYNKIITNPPIRA----GKE------VLHRIIEEGKELLKDNGEIWVVIQTKQ--GAKSLAKYMKDVFGNVETVT 181 (194)
T ss_dssp SCEEEEEECCCSTT----CHH------HHHHHHHHHHHHEEEEEEEEEEEESTH--HHHHHHHHHHHHHSCCEEEE
T ss_pred CCceEEEECCCccc----chh------HHHHHHHHHHHHcCCCCEEEEEECCCC--ChHHHHHHHHHHhcceEEEe
Confidence 46888888754321 111 112234557889999999999998873 45568888888898877663
No 302
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=81.09 E-value=0.93 Score=45.82 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=26.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||+|..+..++.+ .++++|+|+.+
T Consensus 49 ~VLEIG~G~G~lt~~L~~~---~~~V~avEid~ 78 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA---GAEVTAIEKDL 78 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT---TCCEEEEESCG
T ss_pred eEEEEeCchHHHHHHHHHc---CCEEEEEECCH
Confidence 6999999999999999985 37899999864
No 303
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=80.25 E-value=1.8 Score=45.70 Aligned_cols=119 Identities=17% Similarity=0.125 Sum_probs=66.8
Q ss_pred cceEEEeccCCChhHHHHHHh---------------cCCCCeEEEEecCCCCCCC-----CCcccCCCCCCccccCCCcc
Q psy13508 317 LLYFADVCAGPGGFSEYVLYR---------------KKWRAKGIGFTLTGSHDFK-----LDDFFAGPSETFEPYYGVKG 376 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~r---------------~~~~~k~~GvdL~~~~~~~-----l~~~~~~~~~~~~~~~Gv~~ 376 (621)
.++++||||+.|..|-.+... ..+...++..||.+ |||+ ++.+.. .. .++|-.-.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~-NDFntlF~~L~~~~~---~~-~~~f~~gv 126 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPG-NDFNAIFRSLPIEND---VD-GVCFINGV 126 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTT-SCHHHHHTTTTTSCS---CT-TCEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCc-hHHHHHHHhcchhcc---cC-CCEEEEec
Confidence 468999999999987643221 13456899999975 4543 111110 00 12221112
Q ss_pred cccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCc-------------------hhh--HHHHHHHHHHHHHH-h
Q psy13508 377 NGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQ-------------------ENI--QEILSKRLYLCQFL-V 434 (621)
Q Consensus 377 ~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~-------------------~~~--de~~~~~L~l~~l~-~ 434 (621)
.|-++. +.+....+|+|.|=.+..+--+ +.. --..|.+-.+..++ .
T Consensus 127 pgSFy~------------rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~ 194 (359)
T 1m6e_X 127 PGSFYG------------RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC 194 (359)
T ss_dssp ESCSSS------------CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH
T ss_pred chhhhh------------ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455553 1234578999988877544211 001 00122334445544 4
Q ss_pred hhhccCCCcEEEEEEccC
Q psy13508 435 SLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 435 al~~Lr~GG~fV~K~F~~ 452 (621)
--+.|+|||.||+-+..-
T Consensus 195 Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 195 RAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp HHHHBCTTCEEEEEEEEC
T ss_pred HHHHhcCCceEEEEEecC
Confidence 567899999999999864
No 304
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=80.24 E-value=0.79 Score=45.89 Aligned_cols=30 Identities=20% Similarity=-0.016 Sum_probs=26.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||.|.++-++..+ .++++|+|+.+
T Consensus 86 ~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~ 115 (258)
T 2r6z_A 86 TVWDATAGLGRDSFVLASL---GLTVTAFEQHP 115 (258)
T ss_dssp CEEETTCTTCHHHHHHHHT---TCCEEEEECCH
T ss_pred eEEEeeCccCHHHHHHHHh---CCEEEEEECCh
Confidence 7999999999999998874 47899999975
No 305
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=79.85 E-value=0.29 Score=54.58 Aligned_cols=131 Identities=15% Similarity=0.147 Sum_probs=67.7
Q ss_pred eEEEeccCCChhHHHHHHhcC--------------CCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC-----ccccc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKK--------------WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV-----KGNGD 379 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~--------------~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv-----~~~GD 379 (621)
+|+|.|||.|||.-.+..+.. ....++|+++.+.. +.+...++ ...|+ ...||
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~-------~~lA~~Nl-~l~gi~~~i~i~~gD 318 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTT-------WKLAAMNM-VIRGIDFNFGKKNAD 318 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHH-------HHHHHHHH-HHTTCCCBCCSSSCC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHH-------HHHHHHHH-HHhCCCcccceeccc
Confidence 799999999999876654321 13578999886420 00000000 11121 14566
Q ss_pred CCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCC--chhh--HH--------------HHHHHHHHHHHHhhhhccCC
Q psy13508 380 VYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEG--QENI--QE--------------ILSKRLYLCQFLVSLFIVRP 441 (621)
Q Consensus 380 I~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G--~~~~--de--------------~~~~~L~l~~l~~al~~Lr~ 441 (621)
..... .....++|+||+.=-+.... .... +. .-.....++-+.-++..|++
T Consensus 319 tL~~~-----------~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 319 SFLDD-----------QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp TTTSC-----------SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred hhcCc-----------ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 55321 11246899999985444321 0000 00 00011223444568899999
Q ss_pred CcEEEEEEccC--CCC--ChHHHHHHHHhcc
Q psy13508 442 EGHFVCKVFDM--FTP--FSAGLLYLLYRSY 468 (621)
Q Consensus 442 GG~fV~K~F~~--~~~--~s~~ll~~l~~~F 468 (621)
||.+++=+-.+ +.. ....+...|-..+
T Consensus 388 gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 388 TGSMALLLANGSMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp EEEEEEEEETHHHHCCGGGHHHHHHHHHHTT
T ss_pred CceEEEEecchhhhcCcchHHHHHHHHHhCC
Confidence 99977776442 111 2456665544333
No 306
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=79.82 E-value=1.5 Score=47.17 Aligned_cols=30 Identities=20% Similarity=0.219 Sum_probs=26.9
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++||||||.|.++..+..+ .++++|+|+.+
T Consensus 289 ~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~ 318 (433)
T 1uwv_A 289 RVLDLFCGMGNFTLPLATQ---AASVVGVEGVP 318 (433)
T ss_dssp EEEEESCTTTTTHHHHHTT---SSEEEEEESCH
T ss_pred EEEECCCCCCHHHHHHHhh---CCEEEEEeCCH
Confidence 8999999999999999875 57999999875
No 307
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=79.43 E-value=1.2 Score=43.53 Aligned_cols=54 Identities=9% Similarity=0.145 Sum_probs=34.1
Q ss_pred ccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHH-hcCCCCEEEEe
Q psy13508 48 CVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF-IVRPEGHFVCK 123 (621)
Q Consensus 48 ~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~-~L~~gG~fV~K 123 (621)
.++ .+||+.+...+.. ....++|+|++|++. . +. ...+.-+.+ +|+|||.+|+-
T Consensus 131 ~v~~~~gD~~~~~~l~~--------~~~~~fD~I~~d~~~-----~--~~-------~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 131 NITLHQGDCSDLTTFEH--------LREMAHPLIFIDNAH-----A--NT-------FNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp TEEEEECCSSCSGGGGG--------GSSSCSSEEEEESSC-----S--SH-------HHHHHHHHHHTCCTTCEEEEC
T ss_pred ceEEEECcchhHHHHHh--------hccCCCCEEEECCch-----H--hH-------HHHHHHHHHhhCCCCCEEEEE
Confidence 455 6899987532111 123479999999873 1 11 113444564 99999999994
No 308
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=78.81 E-value=1.6 Score=44.85 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=60.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~ 392 (621)
++|+ +|+=+|+||+|-.....-+....++++++|..+.. + .+....|.+..=|-.+.+..+.+
T Consensus 162 ~~g~--~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r---~---------~~~~~~Ga~~~i~~~~~~~~~~v--- 224 (348)
T 4eez_A 162 KPGD--WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDK---L---------NLAKKIGADVTINSGDVNPVDEI--- 224 (348)
T ss_dssp CTTC--EEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHH---H---------HHHHHTTCSEEEEC-CCCHHHHH---
T ss_pred CCCC--EEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHH---h---------hhhhhcCCeEEEeCCCCCHHHHh---
Confidence 6787 78888999876555443333346899999875321 0 11123344322344444444444
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
.+.+.+.++|+++-+.+. .. .+..++..|++||.+++--.
T Consensus 225 -~~~t~g~g~d~~~~~~~~-----~~------------~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 225 -KKITGGLGVQSAIVCAVA-----RI------------AFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp -HHHTTSSCEEEEEECCSC-----HH------------HHHHHHHTEEEEEEEEECCC
T ss_pred -hhhcCCCCceEEEEeccC-----cc------------hhheeheeecCCceEEEEec
Confidence 444677899998877532 11 12246788999999887543
No 309
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=78.78 E-value=2 Score=42.84 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=25.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+++ +|||+|||+|..+. + .+ ....+++|+|+.+
T Consensus 20 ~~~~--~VLEIG~G~G~lt~-l-~~-~~~~~v~avEid~ 53 (252)
T 1qyr_A 20 QKGQ--AMVEIGPGLAALTE-P-VG-ERLDQLTVIELDR 53 (252)
T ss_dssp CTTC--CEEEECCTTTTTHH-H-HH-TTCSCEEEECCCH
T ss_pred CCcC--EEEEECCCCcHHHH-h-hh-CCCCeEEEEECCH
Confidence 4455 79999999999999 5 44 3233499999864
No 310
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=78.73 E-value=4.7 Score=42.78 Aligned_cols=148 Identities=15% Similarity=0.107 Sum_probs=74.1
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCC-CcccCC-CCCCccccCCCcccccCCChhhHHHHHHHHHhh
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKL-DDFFAG-PSETFEPYYGVKGNGDVYDPENILSLHEFVMKS 396 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l-~~~~~~-~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~ 396 (621)
+||=+|.|-||-...+++. . ..++..|++-+.- ++. .++++. ....+....+. .-.+.-.+..+.+.+.. +
T Consensus 208 rVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~V-Ve~ar~yfp~~~~~~~d~pr~~--rv~vii~Da~~fl~~~~-~- 280 (381)
T 3c6k_A 208 DVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMV-IDGCKKYMRKTCGDVLDNLKGD--CYQVLIEDCIPVLKRYA-K- 280 (381)
T ss_dssp EEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHH-HHHHHHHCCC----CCSSSEET--TEEEEESCHHHHHHHHH-H-
T ss_pred eEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHH-HHHHHhhchhhhhhhhcccccc--ceeeehHHHHHHHHhhh-h-
Confidence 7999999999999999864 3 3678888775420 000 001100 00000000000 00111112233333321 1
Q ss_pred cCCCcccEEEecCCCC-CCCchhhHHHHHHHHHHHHHH-hhhhccCCCcEEEEEEccCCCC-ChHHHHHHHHhccceeEe
Q psy13508 397 TKGRGVHFMMADGGFS-VEGQENIQEILSKRLYLCQFL-VSLFIVRPEGHFVCKVFDMFTP-FSAGLLYLLYRSYKQVCI 473 (621)
Q Consensus 397 ~~~~~vDlVlsDg~~~-~~G~~~~de~~~~~L~l~~l~-~al~~Lr~GG~fV~K~F~~~~~-~s~~ll~~l~~~F~~V~i 473 (621)
.+.++|+|+.|..-. .++.+.-. ...|...+.. .+.+.|+|||.||+-.=..+.+ ....+...|++.|..|.+
T Consensus 281 -~~~~yDvIIvDl~D~~~s~~p~g~---a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~ 356 (381)
T 3c6k_A 281 -EGREFDYVINDLTAVPISTSPEED---STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 356 (381)
T ss_dssp -HTCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred -ccCceeEEEECCCCCcccCcccCc---chHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceE
Confidence 256899999997421 12222111 1223433433 5668899999999864222111 123445668888988876
Q ss_pred ecCC
Q psy13508 474 FKPN 477 (621)
Q Consensus 474 ~KP~ 477 (621)
.++.
T Consensus 357 ~~~~ 360 (381)
T 3c6k_A 357 SKEI 360 (381)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 6543
No 311
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=78.72 E-value=5.2 Score=42.48 Aligned_cols=123 Identities=13% Similarity=0.070 Sum_probs=66.3
Q ss_pred cceEEEeccCCChhHHHHHHh-------c---------CCCCeEEEEecCCCCCCCC-----CcccC----CCCCCcccc
Q psy13508 317 LLYFADVCAGPGGFSEYVLYR-------K---------KWRAKGIGFTLTGSHDFKL-----DDFFA----GPSETFEPY 371 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~r-------~---------~~~~k~~GvdL~~~~~~~l-----~~~~~----~~~~~~~~~ 371 (621)
.++++||||+.|..|-.+... . .+...++..||.. |||+- +.|.. .....+.++
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~-NDFN~lF~~L~~~~~~~~~~~g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQ-NDFNSVFKLLPSFYRNLEKENGRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHHTCCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCc-cchHHHHhhhhhhHhhhhhhccCCCCce
Confidence 468999999999999866543 0 1345688888864 55421 11100 000001112
Q ss_pred CCCcccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCCch--h-----------------------hHHH--HH
Q psy13508 372 YGVKGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQE--N-----------------------IQEI--LS 424 (621)
Q Consensus 372 ~Gv~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~--~-----------------------~de~--~~ 424 (621)
|-.-..|-++. +.+....+|+|.|=.+..+--+. . .-+. .|
T Consensus 132 f~~gvpgSFy~------------rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Q 199 (384)
T 2efj_A 132 LIGAMPGSFYS------------RLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQ 199 (384)
T ss_dssp EEEECCSCTTS------------CCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHH
T ss_pred EEEecchhhhh------------ccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHH
Confidence 11112344443 12346789999998876552111 0 1001 12
Q ss_pred HHHHHHHHH-hhhhccCCCcEEEEEEccC
Q psy13508 425 KRLYLCQFL-VSLFIVRPEGHFVCKVFDM 452 (621)
Q Consensus 425 ~~L~l~~l~-~al~~Lr~GG~fV~K~F~~ 452 (621)
.+-.+..++ .-.+.|+|||.||+-+..-
T Consensus 200 f~~D~~~FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 200 FTKDFTTFLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEecC
Confidence 233333333 4567899999999999874
No 312
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=78.15 E-value=1.8 Score=41.94 Aligned_cols=29 Identities=10% Similarity=-0.138 Sum_probs=21.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|++|+ | .|...+-+. ..++++.++..+
T Consensus 33 ~VLEiGt--G-ySTl~lA~~-~~g~VvtvE~d~ 61 (202)
T 3cvo_A 33 VILEYGS--G-GSTVVAAEL-PGKHVTSVESDR 61 (202)
T ss_dssp EEEEESC--S-HHHHHHHTS-TTCEEEEEESCH
T ss_pred EEEEECc--h-HHHHHHHHc-CCCEEEEEeCCH
Confidence 7999997 3 577666553 368999998754
No 313
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=78.01 E-value=1.8 Score=41.90 Aligned_cols=32 Identities=9% Similarity=0.065 Sum_probs=27.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||||||.|..+-.+.. ..+.++++|+|+.+
T Consensus 52 ~VLDlGCG~GplAl~l~~-~~p~a~~~A~Di~~ 83 (200)
T 3fzg_A 52 SILDFGCGFNPLALYQWN-ENEKIIYHAYDIDR 83 (200)
T ss_dssp EEEEETCTTHHHHHHHHC-SSCCCEEEEECSCH
T ss_pred eEEEecCCCCHHHHHHHh-cCCCCEEEEEeCCH
Confidence 899999999999997765 44677999999874
No 314
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=77.51 E-value=2.2 Score=43.41 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=50.5
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeE---ccCCCcChHHHHHHHHcccceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKV---FDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~Kv---F~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
...+|+|++|.......... |. ..-+..+.+.|+|||.||+-. +... +....++..+++.|..|..+
T Consensus 155 ~~~fDvIi~D~~~p~~~~~~--------l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~-~~~~~~~~~l~~~F~~v~~~ 225 (294)
T 3adn_A 155 SQTFDVIISDCTDPIGPGES--------LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ-EEAIDSHRKLSHYFSDVGFY 225 (294)
T ss_dssp CCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC-HHHHHHHHHHHHHCSEEEEE
T ss_pred CCCccEEEECCCCccCcchh--------ccHHHHHHHHHHhcCCCCEEEEecCCcccch-HHHHHHHHHHHHHCCCeEEE
Confidence 45799999998654321111 11 112355788999999999986 2221 24678888899999998865
Q ss_pred c-CCCCCCCCceeeecccC
Q psy13508 150 K-PNTSRPANSERYIVCKW 167 (621)
Q Consensus 150 K-P~aSR~~s~E~y~v~~~ 167 (621)
- +-.+-|+..-.|.+|..
T Consensus 226 ~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 226 QAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp EEECTTSSSSEEEEEEEES
T ss_pred EEEecccCCCceEEEEEeC
Confidence 3 22233444446667764
No 315
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=76.95 E-value=0.59 Score=53.43 Aligned_cols=107 Identities=11% Similarity=-0.035 Sum_probs=58.2
Q ss_pred ceEEEeccCCChhHHHHHHh---cC---------CCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-C-cccccCCCh
Q psy13508 318 LYFADVCAGPGGFSEYVLYR---KK---------WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-V-KGNGDVYDP 383 (621)
Q Consensus 318 ~~vlDLcaaPGGwsqyl~~r---~~---------~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v-~~~GDI~~~ 383 (621)
..|+|+|||.|-.+..++.. .+ ...+++||+-++.....+..... ....+ + -+.||+.+.
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~------Ng~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV------RTWKRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH------HTTTTCSEEEESCGGGH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh------cCCCCeEEEEeCchhhc
Confidence 48999999999998754322 11 23599999876421000000000 00111 2 468888875
Q ss_pred hhHHHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEE
Q psy13508 384 ENILSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 384 ~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
+.... .-..++||+|+|-.--..-.+ | + ...-+..+-+.|+|||.++
T Consensus 485 ~lp~~-------~~~~ekVDIIVSElmGsfl~n----E-L----~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 485 PGIAK-------DRGFEQPDIIVSELLGSFGDN----E-L----SPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHH-------HTTCCCCSEEEECCCBTTBGG----G-S----HHHHHHTTGGGSCTTCEEE
T ss_pred ccccc-------cCCCCcccEEEEeccccccch----h-c----cHHHHHHHHHhCCCCcEEE
Confidence 43211 113579999999964322111 1 1 1111223458899999866
No 316
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=75.84 E-value=2 Score=46.11 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.4
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++||||||.|.|+..+..+ ..+++|+|+.+
T Consensus 293 ~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~ 322 (425)
T 2jjq_A 293 KILDMYSGVGTFGIYLAKR---GFNVKGFDSNE 322 (425)
T ss_dssp EEEEETCTTTHHHHHHHHT---TCEEEEEESCH
T ss_pred EEEEeeccchHHHHHHHHc---CCEEEEEECCH
Confidence 8999999999999998864 46899999874
No 317
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=75.76 E-value=1.8 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=28.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|. +|||||||.|+.+.++..+ .++++|+|+.+
T Consensus 92 ~~g~--~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~ 125 (410)
T 3ll7_A 92 REGT--KVVDLTGGLGIDFIALMSK---ASQGIYIERND 125 (410)
T ss_dssp CTTC--EEEESSCSSSHHHHHHHTT---CSEEEEEESCH
T ss_pred CCCC--EEEEeCCCchHHHHHHHhc---CCEEEEEECCH
Confidence 4455 8999999999999987753 47999999875
No 318
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=75.06 E-value=3.4 Score=37.82 Aligned_cols=53 Identities=8% Similarity=0.031 Sum_probs=27.7
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 128 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~ 128 (621)
..++|+|+++...-..+.+..... ..-....+.-+.++|+|||.|++=+|.+.
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSVITK--PHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp CSCEEEEEEEEC-----------C--HHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred cCCcCEEEEeCCCCCCcchhcccC--hhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 456999998842211111111110 01223345668899999999999999764
No 319
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=74.96 E-value=7.3 Score=46.41 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=69.9
Q ss_pred CCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeE-ccCCCcChHHHHHHHHcccceeEEecC
Q psy13508 73 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV-FDMFTPFSAGLLYLLYRSYKQVCIFKP 151 (621)
Q Consensus 73 ~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~Kv-F~g~~~~~~~l~~~l~~~F~~v~~~KP 151 (621)
..+-+.+|=||---=..|..+.+. +.++..+.+..|+++..+||++|+|+ |-.. .....+...+...|..+...||
T Consensus 571 pTGtf~fVYSDVDQV~d~~~Dl~A--s~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~-~vw~~if~~~~~~~~~~~i~KP 647 (1299)
T 3iyl_W 571 PTGTFGLVYADLDQVEDAGTDMPA--ANRAAIAMLGTALQMTTAGGVSVLKVNFPTR-AFWTQVFNLYATHATTLHLVKP 647 (1299)
T ss_dssp CCCCEEEEEECCCCC-----CCHH--HHHHHHHHHHHHHHHEEEEEEEEEEESCCCT-THHHHHHHHTTTTCSCEEEEEC
T ss_pred CCCceEEEEecchhhccCCcchhh--hhHHHHHHHHHHHHhhcCCceEEEEEcCCch-HHHHHHHHHhcchhheeeeecc
Confidence 345789999998888888888887 66788888899999999999999998 5443 2456777788889999999999
Q ss_pred CCCCCCCceeeecccCC
Q psy13508 152 NTSRPANSERYIVCKWK 168 (621)
Q Consensus 152 ~aSR~~s~E~y~v~~~~ 168 (621)
- --.|.|+|++.-+.
T Consensus 648 l--i~NnvEvf~v~~~r 662 (1299)
T 3iyl_W 648 T--IVNSSEVFLVFGGR 662 (1299)
T ss_dssp C--SSSCCCEEEEESCC
T ss_pred e--eecceEEEEEEeee
Confidence 6 45688999975543
No 320
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=74.96 E-value=1.7 Score=43.56 Aligned_cols=30 Identities=13% Similarity=-0.065 Sum_probs=26.8
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||+|||.|..+-++..+ .++++|+|..+
T Consensus 91 ~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~ 120 (258)
T 2oyr_A 91 DVVDATAGLGRDAFVLASV---GCRVRMLERNP 120 (258)
T ss_dssp CEEETTCTTCHHHHHHHHH---TCCEEEEECCH
T ss_pred EEEEcCCcCCHHHHHHHHc---CCEEEEEECCH
Confidence 7999999999999999986 46899999875
No 321
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=74.85 E-value=3.6 Score=43.70 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=15.3
Q ss_pred eEEEeccCCChhHHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLY 336 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~ 336 (621)
.++|.|||.|.+.-.+..
T Consensus 204 ~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 204 PFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp CEEETTCTTSHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHH
Confidence 799999999999876554
No 322
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=74.73 E-value=1.3 Score=46.91 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=45.4
Q ss_pred ceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccc-cCCC-cccccCCChhhHHHHHHHHHh
Q psy13508 318 LYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEP-YYGV-KGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 318 ~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~-~~Gv-~~~GDI~~~~~~~~l~~~v~~ 395 (621)
++++||+||.||++.-+.+. + ...++++|+.+.. .+.+.. ..+. ...|||.+... +.+....
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a-----------~~t~~~N~~~~~~~~~DI~~~~~-~~~~~~~-- 66 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHA-----------INTHAINFPRSLHVQEDVSLLNA-EIIKGFF-- 66 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHH-----------HHHHHHHCTTSEEECCCGGGCCH-HHHHHHH--
T ss_pred CeEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHH-----------HHHHHHhCCCCceEecChhhcCH-HHHHhhc--
Confidence 47999999999999877653 3 2346688765310 000000 1122 35788886543 2232211
Q ss_pred hcCCCcccEEEecCCCCCCCc
Q psy13508 396 STKGRGVHFMMADGGFSVEGQ 416 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~ 416 (621)
.....+|+|+++ |+|+|.
T Consensus 67 -~~~~~~D~i~gg--pPCQ~f 84 (376)
T 3g7u_A 67 -KNDMPIDGIIGG--PPCQGF 84 (376)
T ss_dssp -CSCCCCCEEEEC--CCCCTT
T ss_pred -ccCCCeeEEEec--CCCCCc
Confidence 134679999964 666654
No 323
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=74.06 E-value=1.6 Score=44.59 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=43.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCC-CcccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYG-VKGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~G-v~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
+|+||.||-||++.-+. +.+. -.++++|+.+.. .+++...++ ....|||++....
T Consensus 2 kvidLFsG~GG~~~G~~-~aG~-~~v~a~e~d~~a-----------~~ty~~N~~~~~~~~DI~~i~~~----------- 57 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQ-KAGF-RIICANEYDKSI-----------WKTYESNHSAKLIKGDISKISSD----------- 57 (331)
T ss_dssp EEEEESCTTCHHHHHHH-HTTC-EEEEEEECCTTT-----------HHHHHHHCCSEEEESCGGGCCGG-----------
T ss_pred eEEEeCcCccHHHHHHH-HCCC-EEEEEEeCCHHH-----------HHHHHHHCCCCcccCChhhCCHh-----------
Confidence 79999999999998654 4553 346688775321 011111222 2457888763311
Q ss_pred CCCcccEEEecCCCCCCCc
Q psy13508 398 KGRGVHFMMADGGFSVEGQ 416 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~ 416 (621)
.-..+|+++ |||+|+|.
T Consensus 58 ~~~~~D~l~--ggpPCQ~f 74 (331)
T 3ubt_Y 58 EFPKCDGII--GGPPSQSW 74 (331)
T ss_dssp GSCCCSEEE--CCCCGGGT
T ss_pred hCCcccEEE--ecCCCCCc
Confidence 124689876 78888753
No 324
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=73.96 E-value=2.7 Score=42.35 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=43.2
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcccceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..++|+|++|.. +..|.. .+ |. ...+..+.+.|+|||.||+..-.-. .+....+...+++.|..|..+
T Consensus 149 ~~~fD~Ii~d~~-~~~~~~--~~-----l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 219 (283)
T 2i7c_A 149 TNTYDVIIVDSS-DPIGPA--ET-----LFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYA 219 (283)
T ss_dssp CSCEEEEEEECC-CTTTGG--GG-----GSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCceEEEEcCC-CCCCcc--hh-----hhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEE
Confidence 457999999964 222211 11 11 2234567889999999999843211 023466777888999988765
No 325
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=69.89 E-value=43 Score=34.60 Aligned_cols=147 Identities=13% Similarity=0.031 Sum_probs=81.5
Q ss_pred eEEEeccCCChhHHHHHHh---cCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYR---KKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r---~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~ 395 (621)
.||=.|||||.+..+|.+. .+...+++.+|-.+.+. .++ ...-+...-++++.+.++.+.+.+
T Consensus 78 ~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~-~Le-----------~~~ni~li~~ffde~~i~~l~~~~-- 143 (348)
T 1vpt_A 78 TVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP-ILN-----------GLRDVTLVTRFVDEEYLRSIKKQL-- 143 (348)
T ss_dssp EEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG-GGT-----------TCTTEEEEECCCCHHHHHHHHHHH--
T ss_pred eEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhh-hhc-----------CCCcEEeehhhcCHHHHHHHHHHh--
Confidence 7999999999999999873 44568999999765331 111 111233445677777777776654
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhcc--ceeEe
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY--KQVCI 473 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F--~~V~i 473 (621)
.+. -=|.+||--....+.+..++.+.. ....-...+.+|+|--++ +|..-.+.+.. ..-| -.-.+
T Consensus 144 --~~~-~vLfISDIRS~~~~~Ep~~~dll~--Dy~lQn~w~~iLkP~aSm-LKFRlPyp~~~-------~~~~yi~dG~~ 210 (348)
T 1vpt_A 144 --HPS-KIILISDVASAAGGNEPSTADLLS--NYALQNVMISILNPVASS-LKWRCPFPDQW-------IKDFYIPHGNK 210 (348)
T ss_dssp --TTS-CEEEEECCCC------CCHHHHHH--HHHHHHHHHHHHCCSEEE-EEECCCCGGGC-------CCCEEEECCEE
T ss_pred --cCC-CEEEEEecccCCCCCCccHHHHHH--HHHHHHHHHHHhhhHHHh-ccccCCCCCCC-------CCceEeeCCCE
Confidence 222 236789975433222222222211 111222345677876553 46554433211 0112 12345
Q ss_pred ecCCCCCCCCceEEEEEee
Q psy13508 474 FKPNTSRPANSERYIVCKW 492 (621)
Q Consensus 474 ~KP~aSR~~ssE~YlVc~g 492 (621)
+=|.=-++.|+|.=+|...
T Consensus 211 ~Lqvwap~tStE~RLvv~~ 229 (348)
T 1vpt_A 211 MLQPFAPSYSAEMRLLSIY 229 (348)
T ss_dssp ECCTTCCTTCCCEEEEEEC
T ss_pred EecccCCCCcceEEEEEec
Confidence 5566778889999888744
No 326
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=69.23 E-value=2.8 Score=43.80 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=25.7
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|+|||||.|+|+-.+..+ ..+++|+|+.+
T Consensus 216 ~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~ 245 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALARN---FDRVLATEIAK 245 (369)
T ss_dssp EEEEESCTTSHHHHHHGGG---SSEEEEECCCH
T ss_pred EEEEccCCCCHHHHHHHhc---CCEEEEEECCH
Confidence 7999999999999977653 46899999875
No 327
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=68.50 E-value=7.5 Score=46.06 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=73.6
Q ss_pred CCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeE-ccCCCcChHHHHHHHHcccceeEEecC
Q psy13508 73 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV-FDMFTPFSAGLLYLLYRSYKQVCIFKP 151 (621)
Q Consensus 73 ~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~Kv-F~g~~~~~~~l~~~l~~~F~~v~~~KP 151 (621)
..+-+-+|=||---=+.|..+.+. +.....+.+..|+++.-+||++|+|+ |-.. ..-..|.......|...+..||
T Consensus 567 pTGtf~fVYSDvDQV~dgg~Dl~A--asr~~~~~l~~~l~~tt~GG~~VvKiNFPT~-~~W~~lf~~~~~~~~s~~lvKP 643 (1289)
T 1ej6_A 567 PSGDYQFVYSDVDQVVDGHDDLSI--SSGLVESLLSSCMHATAPGGSFVVKINFPTR-PVWHYIEQKILPNITSYMLIKP 643 (1289)
T ss_dssp SCCCEEEEEECCCCCCSSSTTHHH--HHHHHHHHHHHHHHHEEEEEEEEEEESSCCH-HHHHHHHHHTGGGEEEEEEEEE
T ss_pred CCcceEEEEechhhhhcCCCcchh--hHHHHHHHHHHHHHhhccCceEEEEEcCCCh-HHHHHHHHhhccccceeeeecc
Confidence 445789999999998999999888 66788888899999999999999998 3331 2334566666778999999999
Q ss_pred CCCCCCCceeeecccCCC
Q psy13508 152 NTSRPANSERYIVCKWKR 169 (621)
Q Consensus 152 ~aSR~~s~E~y~v~~~~~ 169 (621)
- --.|.|.|++|-+..
T Consensus 644 ~--IvNnvEvflv~~~r~ 659 (1289)
T 1ej6_A 644 F--VTNNVELFFVAFGVH 659 (1289)
T ss_dssp E--SSSSCCEEEEEEEES
T ss_pred e--eecceEEEEEEEeee
Confidence 6 457889999876543
No 328
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=65.47 E-value=6 Score=39.56 Aligned_cols=87 Identities=9% Similarity=0.127 Sum_probs=50.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcccceeEEecC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCIFKP 151 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~F~~v~~~KP 151 (621)
..++|+|++|..... +... +... ..-+..+.+.|+|||.||+-.-... .+....++..+++.|..|..+.-
T Consensus 146 ~~~fD~Ii~d~~~~~-~~~~--~l~~----~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 218 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPV-GPAV--NLFT----KGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTA 218 (275)
T ss_dssp CSCEEEEEESCSSCC-SCCC--CCST----THHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCeeEEEECCCCCC-Ccch--hhhH----HHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 357999999975322 2110 0000 0123456689999999999864321 12346677788999999887642
Q ss_pred -CCCCCCCceeeecccC
Q psy13508 152 -NTSRPANSERYIVCKW 167 (621)
Q Consensus 152 -~aSR~~s~E~y~v~~~ 167 (621)
-.+-++..-.+++|..
T Consensus 219 ~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 219 NIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp CCTTSGGGCEEEEEEES
T ss_pred ecCcccCcceEEEEeeC
Confidence 2222333344556654
No 329
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=65.00 E-value=5.8 Score=39.54 Aligned_cols=60 Identities=7% Similarity=-0.003 Sum_probs=39.6
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC--cChHHHHHHHHcccceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT--PFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~--~~~~~l~~~l~~~F~~v~~~K 150 (621)
.++|+|++|.+. + .. .+..+.+.|+|||.||+..-.... .....+...+++.|..+..+.
T Consensus 138 ~~fD~Ii~d~~d-----p--~~---------~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~ 199 (262)
T 2cmg_A 138 KKYDLIFCLQEP-----D--IH---------RIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFV 199 (262)
T ss_dssp CCEEEEEESSCC-----C--HH---------HHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hhCCEEEECCCC-----h--HH---------HHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEE
Confidence 468999999421 1 11 345678899999999997532210 124455667788899988774
No 330
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=64.38 E-value=6.6 Score=41.37 Aligned_cols=85 Identities=15% Similarity=0.106 Sum_probs=46.8
Q ss_pred CCcccEEEecCCC-CCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHH-HHcccceeEEecC
Q psy13508 74 GRGVHFMMADGGF-SVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYL-LYRSYKQVCIFKP 151 (621)
Q Consensus 74 ~~~~dlVlsDgap-n~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~-l~~~F~~v~~~KP 151 (621)
+.++|+|++|..- ..+..+.. ..+.......+..+.+.|+|||.+|+=.=...-+....++.. +++.|..|..-|-
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~--L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~ 342 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEE--DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKE 342 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchh--hhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeE
Confidence 4679999999753 22211211 111222332335578999999999876433321122344443 7889999986433
Q ss_pred CCCCCCCce
Q psy13508 152 NTSRPANSE 160 (621)
Q Consensus 152 ~aSR~~s~E 160 (621)
...-|+-.|
T Consensus 343 ~~~vPsy~~ 351 (364)
T 2qfm_A 343 IVCVPSYLE 351 (364)
T ss_dssp EECCGGGSS
T ss_pred eeecCCchh
Confidence 344554444
No 331
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=63.83 E-value=8.3 Score=39.31 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=44.3
Q ss_pred CCcccEEEecCCCCCC--CChhhhHHHHHHH-HHHHHHHHHHhcCCCCEEEEeEccC---CCcChHHHHHHHHcccceeE
Q psy13508 74 GRGVHFMMADGGFSVE--GQENIQEILSKRL-YLCQFLVSLFIVRPEGHFVCKVFDM---FTPFSAGLLYLLYRSYKQVC 147 (621)
Q Consensus 74 ~~~~dlVlsDgapn~s--G~~~~d~~~~~~L-~l~~l~~A~~~L~~gG~fV~KvF~g---~~~~~~~l~~~l~~~F~~v~ 147 (621)
..++|+|++|...... |. ..+ | ....+..+.++|+|||.|++-.... ..+....+...+++.|..|.
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~--~~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 221 (314)
T 1uir_A 149 EERYDVVIIDLTDPVGEDNP--ARL-----LYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVR 221 (314)
T ss_dssp CCCEEEEEEECCCCBSTTCG--GGG-----GSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEE
T ss_pred CCCccEEEECCCCcccccCc--chh-----ccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceE
Confidence 4579999999754330 21 111 1 1223456778999999999975321 11246678888999999887
Q ss_pred Ee
Q psy13508 148 IF 149 (621)
Q Consensus 148 ~~ 149 (621)
.+
T Consensus 222 ~~ 223 (314)
T 1uir_A 222 SY 223 (314)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 332
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=63.12 E-value=5.7 Score=37.72 Aligned_cols=76 Identities=7% Similarity=-0.103 Sum_probs=41.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHH--------HHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHccccee
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILS--------KRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQV 146 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~--------~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v 146 (621)
..+|+|++|......+.....+... ..+....+..+.++|+|||.|++-+-.+. .....+...+++..-.+
T Consensus 122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGYSV 200 (230)
T ss_dssp SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTCEE
T ss_pred CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCCce
Confidence 5799999885543333322111000 01123345668899999999999765542 24567777777663355
Q ss_pred EEecC
Q psy13508 147 CIFKP 151 (621)
Q Consensus 147 ~~~KP 151 (621)
+..+.
T Consensus 201 ~~~~~ 205 (230)
T 3evz_A 201 KDIKF 205 (230)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 333
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=62.77 E-value=13 Score=33.45 Aligned_cols=75 Identities=12% Similarity=0.000 Sum_probs=46.7
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEecCC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFKPN 152 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~KP~ 152 (621)
...+|+|++.+ ++-.....+. ....+.-+.++|+|||.+++-..........++...+.+. |+.+..+...
T Consensus 105 ~~~~D~i~~~~--~~~~~~~~~~------~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 176 (195)
T 3cgg_A 105 ETDFDLIVSAG--NVMGFLAEDG------REPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESW 176 (195)
T ss_dssp CCCEEEEEECC--CCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESST
T ss_pred CCceeEEEECC--cHHhhcChHH------HHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeeccc
Confidence 35789999763 1111111111 1223455778999999999988766433566777777665 8888877664
Q ss_pred CCCC
Q psy13508 153 TSRP 156 (621)
Q Consensus 153 aSR~ 156 (621)
..++
T Consensus 177 ~~~~ 180 (195)
T 3cgg_A 177 DLKP 180 (195)
T ss_dssp TCCB
T ss_pred ccCc
Confidence 4444
No 334
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=62.63 E-value=21 Score=33.15 Aligned_cols=71 Identities=17% Similarity=0.268 Sum_probs=45.8
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC------------------------
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT------------------------ 129 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~------------------------ 129 (621)
+.++|+|++..... ..+.+. .+.-+.++|+|||.+++-.+....
T Consensus 114 ~~~fD~v~~~~~l~---~~~~~~---------~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 3e8s_A 114 GKDYDLICANFALL---HQDIIE---------LLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQP 181 (227)
T ss_dssp CCCEEEEEEESCCC---SSCCHH---------HHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCC
T ss_pred CCCccEEEECchhh---hhhHHH---------HHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCccc
Confidence 34699999977666 222222 345567899999999998752210
Q ss_pred -----cChHHHHHHHHcc-cceeEEecCCCCCC
Q psy13508 130 -----PFSAGLLYLLYRS-YKQVCIFKPNTSRP 156 (621)
Q Consensus 130 -----~~~~~l~~~l~~~-F~~v~~~KP~aSR~ 156 (621)
....++...+.+. |+.+....|.....
T Consensus 182 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 214 (227)
T 3e8s_A 182 MPWYFRTLASWLNALDMAGLRLVSLQEPQHPQS 214 (227)
T ss_dssp EEEEECCHHHHHHHHHHTTEEEEEEECCCCTTC
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEecCCCCCC
Confidence 0236677777665 88887776654444
No 335
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=62.16 E-value=5.3 Score=42.39 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCcccEEEecCCC-CCCCChhhhHHHHHHHHHHH-HHHHHHhcCCCCEEEEeEccC-CCcChHHHHHHHHcccceeEEec
Q psy13508 74 GRGVHFMMADGGF-SVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFDM-FTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgap-n~sG~~~~d~~~~~~L~l~~-l~~A~~~L~~gG~fV~KvF~g-~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
+.++|+|+.|.-. ..++.+.... ..|...+ +..+.+.|+|||.||+-.=.- ..+....+...+++.|..|..+.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a---~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~ 358 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDS---TWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSK 358 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----C---HHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcc---hHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEee
Confidence 4679999999742 3333332221 1233333 366788999999999752110 01134556677888899887665
Q ss_pred CCCC
Q psy13508 151 PNTS 154 (621)
Q Consensus 151 P~aS 154 (621)
+.+.
T Consensus 359 ~~~~ 362 (381)
T 3c6k_A 359 EIVC 362 (381)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 4333
No 336
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=62.16 E-value=6.3 Score=36.76 Aligned_cols=58 Identities=12% Similarity=-0.010 Sum_probs=36.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
..+|+|+++++.. .. ...+.-+.++|+|||.+++-..... ....+...+++. | .+..+
T Consensus 107 ~~~D~i~~~~~~~-----~~---------~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----ML---------EEIIDAVDRRLKSEGVIVLNAVTLD--TLTKAVEFLEDHGY-MVEVA 165 (204)
T ss_dssp CCCSEEEESCCTT-----CH---------HHHHHHHHHHCCTTCEEEEEECBHH--HHHHHHHHHHHTTC-EEEEE
T ss_pred CCCCEEEECCCCc-----CH---------HHHHHHHHHhcCCCeEEEEEecccc--cHHHHHHHHHHCCC-ceeEE
Confidence 3578888776542 11 1234667889999999999766542 455666666654 6 44433
No 337
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.88 E-value=21 Score=32.88 Aligned_cols=68 Identities=10% Similarity=-0.018 Sum_probs=44.1
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC-------------cChHHHHHHHH
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-------------PFSAGLLYLLY 140 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~-------------~~~~~l~~~l~ 140 (621)
...+|+|++......-...+.. ..+.-+.++|+|||.+++-.+.... ....++...+.
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGPGELP---------DALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE 170 (203)
T ss_dssp CCCEEEEEEESSSTTCCTTTHH---------HHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH
T ss_pred CCCeEEEEehhhHhcCCHHHHH---------HHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH
Confidence 4689999987655443211221 2345567899999999998876531 12466777776
Q ss_pred cc-cceeEEec
Q psy13508 141 RS-YKQVCIFK 150 (621)
Q Consensus 141 ~~-F~~v~~~K 150 (621)
+. |+.+....
T Consensus 171 ~~Gf~~~~~~~ 181 (203)
T 3h2b_A 171 TAGFQVTSSHW 181 (203)
T ss_dssp HTTEEEEEEEE
T ss_pred HCCCcEEEEEe
Confidence 65 88777664
No 338
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=61.61 E-value=8.2 Score=35.59 Aligned_cols=52 Identities=10% Similarity=0.067 Sum_probs=32.9
Q ss_pred CCcccEEEecCCCCCCCChh-hhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC
Q psy13508 74 GRGVHFMMADGGFSVEGQEN-IQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 128 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~-~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~ 128 (621)
..++|+|++|...-..+... ..+. ......+.-+.++|+|||.+++-.|.+.
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRP---ETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCH---HHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred cCCceEEEEcCCcccCcccccccCc---ccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 35799999997541222111 1110 1122345678899999999999998774
No 339
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=61.15 E-value=75 Score=32.42 Aligned_cols=150 Identities=13% Similarity=0.005 Sum_probs=78.7
Q ss_pred eEEEeccCCChhHHHHHHh---cCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHh
Q psy13508 319 YFADVCAGPGGFSEYVLYR---KKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMK 395 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r---~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~ 395 (621)
.|+=+|||||...+++.++ .+...+|+.+|-.+.+.. + ++...+..--++.++..+..+.+.+
T Consensus 63 ~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~-l-----------~~~~NV~li~~fvde~dl~~l~~~~-- 128 (307)
T 3mag_A 63 TVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI-L-----------NGLRDVTLVTRFVDEEYLRSIKKQL-- 128 (307)
T ss_dssp EEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG-G-----------TTCTTEEEEECCCCHHHHHHHHHHH--
T ss_pred EEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhh-h-----------cCCCcEEEEeccCCHHHHHHHHHhc--
Confidence 7999999999999999875 334679999997643210 1 1111122222345666666655543
Q ss_pred hcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhccceeEeec
Q psy13508 396 STKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFK 475 (621)
Q Consensus 396 ~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~K 475 (621)
...=-|.+||-.....|.+..++.+..... .-...+..|+|-.++ +|..-.+.+ +-...+ .+-.-.++=
T Consensus 129 ---~~~~iLLISDIRS~r~~~ep~t~~ll~Dy~--lQ~~w~~~LkP~aS~-LKFR~P~p~---~~~~~~--y~~dG~~~L 197 (307)
T 3mag_A 129 ---HPSKIILISDVRSKRGGNEPSTADLLSNYA--LQNVMISILNPVASS-LKWRCPFPD---QWIKDF--YIPHGNKML 197 (307)
T ss_dssp ---TTSCEEEEECCCC------CCHHHHHHHHH--HHHHHHHHHCCSEEE-EEECCCCGG---GCCCCE--EEECCEEEC
T ss_pred ---cCCCEEEEEEecCCCCCCCccHHHHHHHHH--HHHHHHHHhhhHHHh-ccccCCCCc---CCCcce--EecCCCEEe
Confidence 223347889987765444433333222111 222344678887663 465543321 110000 011334455
Q ss_pred CCCCCCCCceEEEEEeec
Q psy13508 476 PNTSRPANSERYIVCKWK 493 (621)
Q Consensus 476 P~aSR~~ssE~YlVc~g~ 493 (621)
|.=-++.|+|.=++.-+-
T Consensus 198 q~w~p~~StE~RL~v~~~ 215 (307)
T 3mag_A 198 QPFAPSYSAEMRLLSIYT 215 (307)
T ss_dssp CTTCCTTCCCEEEEEECC
T ss_pred cccCCCCcceEEEEEecC
Confidence 666677889988876443
No 340
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=60.83 E-value=6.5 Score=36.36 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCcccEEEecCCCCCCCChh-hhHHH-----HH---------HHHHHHHHHHHHhcCCCCE-EEEeEccCCCcChHHHHH
Q psy13508 74 GRGVHFMMADGGFSVEGQEN-IQEIL-----SK---------RLYLCQFLVSLFIVRPEGH-FVCKVFDMFTPFSAGLLY 137 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~-~d~~~-----~~---------~L~l~~l~~A~~~L~~gG~-fV~KvF~g~~~~~~~l~~ 137 (621)
...+|+|++|......+... .+... .. ......+.-+.++|+|||. +++-+-.. ....+..
T Consensus 99 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~ 175 (215)
T 4dzr_A 99 GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QADEVAR 175 (215)
T ss_dssp TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CHHHHHH
T ss_pred cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cHHHHHH
Confidence 36899999986554433221 00000 00 0112233447789999999 66644322 4455666
Q ss_pred HHH---cccceeEEecCCCCCCCCceeeecccC
Q psy13508 138 LLY---RSYKQVCIFKPNTSRPANSERYIVCKW 167 (621)
Q Consensus 138 ~l~---~~F~~v~~~KP~aSR~~s~E~y~v~~~ 167 (621)
.+. .-|..+..++....+ ++++++..
T Consensus 176 ~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~ 204 (215)
T 4dzr_A 176 LFAPWRERGFRVRKVKDLRGI----DRVIAVTR 204 (215)
T ss_dssp HTGGGGGGTEECCEEECTTSC----EEEEEEEE
T ss_pred HHHHhhcCCceEEEEEecCCC----EEEEEEEE
Confidence 655 458888888655433 66766553
No 341
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=58.33 E-value=13 Score=34.36 Aligned_cols=88 Identities=16% Similarity=0.134 Sum_probs=54.8
Q ss_pred eEEEeccCCC-hhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPG-GFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPG-Gwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++|++|+|+| --+.++.++. ...+.++|+++.. .. ...+||+++..- +
T Consensus 38 rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~A--------------v~-----~v~dDiF~P~~~------~---- 86 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSH--------------GG-----IVRDDITSPRME------I---- 86 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSS--------------TT-----EECCCSSSCCHH------H----
T ss_pred cEEEEccCCChHHHHHHHHhC--CCeEEEEECCccc--------------cc-----eEEccCCCCccc------c----
Confidence 8999999999 5888887643 4679999998531 11 356899986521 1
Q ss_pred CCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCC
Q psy13508 398 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT 454 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~ 454 (621)
-+.+|||-+= -|.. ..|..+ +.+|. +-|..+++|-+.+..
T Consensus 87 -Y~~~DLIYsi-rPP~----El~~~i---~~lA~--------~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 87 -YRGAALIYSI-RPPA----EIHSSL---MRVAD--------AVGARLIIKPLTGED 126 (153)
T ss_dssp -HTTEEEEEEE-SCCT----TTHHHH---HHHHH--------HHTCEEEEECBTTBC
T ss_pred -cCCcCEEEEc-CCCH----HHHHHH---HHHHH--------HcCCCEEEEcCCCCc
Confidence 1378888542 2222 233221 22222 237788888888754
No 342
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=57.68 E-value=11 Score=38.77 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=50.1
Q ss_pred CCCCcceEEEeccCCChhHHH---HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCC-hhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEY---VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD-PENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqy---l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~-~~~~~~ 388 (621)
++|+ +||-.|+ ||.-+. +++.. .+++++++..+.. ++ +..-.|.+..-|..+ .+..+.
T Consensus 167 ~~g~--~VlV~Ga--G~vG~~a~qla~~~--Ga~Vi~~~~~~~~---~~---------~~~~lGa~~~~~~~~~~~~~~~ 228 (352)
T 1e3j_A 167 QLGT--TVLVIGA--GPIGLVSVLAAKAY--GAFVVCTARSPRR---LE---------VAKNCGADVTLVVDPAKEEESS 228 (352)
T ss_dssp CTTC--EEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCHHH---HH---------HHHHTTCSEEEECCTTTSCHHH
T ss_pred CCCC--EEEEECC--CHHHHHHHHHHHHc--CCEEEEEcCCHHH---HH---------HHHHhCCCEEEcCcccccHHHH
Confidence 6777 7888886 444332 23333 4678888764311 00 011234322223332 333444
Q ss_pred HHHHHHhhcC---CCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 389 LHEFVMKSTK---GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 389 l~~~v~~~~~---~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+.+. +. +.++|+|+- +.|... .+..++..|++||.+|+=
T Consensus 229 i~~~----~~~~~g~g~D~vid-----~~g~~~------------~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 229 IIER----IRSAIGDLPNVTID-----CSGNEK------------CITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHH----HHHHSSSCCSEEEE-----CSCCHH------------HHHHHHHHSCTTCEEEEC
T ss_pred HHHH----hccccCCCCCEEEE-----CCCCHH------------HHHHHHHHHhcCCEEEEE
Confidence 4433 22 467999874 333221 122467889999999873
No 343
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=57.62 E-value=2.6 Score=38.27 Aligned_cols=59 Identities=10% Similarity=0.103 Sum_probs=39.3
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~K 150 (621)
..+|+|++++... .. ...+..+.++|+|||.+++-.+... ....+...+++. | .+...+
T Consensus 99 ~~~D~v~~~~~~~-----~~---------~~~l~~~~~~l~~gG~l~~~~~~~~--~~~~~~~~l~~~g~-~~~~~~ 158 (192)
T 1l3i_A 99 PDIDIAVVGGSGG-----EL---------QEILRIIKDKLKPGGRIIVTAILLE--TKFEAMECLRDLGF-DVNITE 158 (192)
T ss_dssp CCEEEEEESCCTT-----CH---------HHHHHHHHHTEEEEEEEEEEECBHH--HHHHHHHHHHHTTC-CCEEEE
T ss_pred CCCCEEEECCchH-----HH---------HHHHHHHHHhcCCCcEEEEEecCcc--hHHHHHHHHHHCCC-ceEEEE
Confidence 4789999886531 11 2234557889999999999887653 456677777665 7 555443
No 344
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=57.38 E-value=6.5 Score=39.74 Aligned_cols=87 Identities=13% Similarity=0.149 Sum_probs=47.6
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcccceeEEec
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~F~~v~~~K 150 (621)
..++|+|++|......|.. . .|. ...+..+.++|+|||.||+-.-... ......++..+++.|..|..+.
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~--~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 233 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQG--G-----HLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYL 233 (296)
T ss_dssp SSCEEEEEEEC-----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCceEEEEcCCCcccCch--h-----hhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEE
Confidence 3579999999642201110 0 011 1223456789999999999643211 1134567778888899988764
Q ss_pred C-CCCCCCCceeeecccC
Q psy13508 151 P-NTSRPANSERYIVCKW 167 (621)
Q Consensus 151 P-~aSR~~s~E~y~v~~~ 167 (621)
. -.+-|...-.+++|..
T Consensus 234 ~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 234 GFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp EECTTSTTSEEEEEEEES
T ss_pred eecCccCCCceEEEEecC
Confidence 1 1222333444666654
No 345
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=57.28 E-value=12 Score=38.17 Aligned_cols=103 Identities=9% Similarity=0.006 Sum_probs=55.2
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEF 392 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~ 392 (621)
++|+ +|+=.|+|+.|-....+-+......++++|..+.. + .+.--+|.+..-|..+....+.+
T Consensus 159 ~~g~--~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k---~---------~~a~~lGa~~~i~~~~~~~~~~~--- 221 (346)
T 4a2c_A 159 CENK--NVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEK---L---------ALAKSFGAMQTFNSSEMSAPQMQ--- 221 (346)
T ss_dssp CTTS--EEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHH---H---------HHHHHTTCSEEEETTTSCHHHHH---
T ss_pred CCCC--EEEEECCCCcchHHHHHHHHcCCcEEEEEechHHH---H---------HHHHHcCCeEEEeCCCCCHHHHH---
Confidence 6677 78888988777555433333233456777765321 0 11123454333344433333322
Q ss_pred HHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 393 VMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 393 v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
...+++.++|+|+--. |.... +..++.+|++||.+++--.
T Consensus 222 -~~~~~~~g~d~v~d~~-----G~~~~------------~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 222 -SVLRELRFNQLILETA-----GVPQT------------VELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp -HHHGGGCSSEEEEECS-----CSHHH------------HHHHHHHCCTTCEEEECCC
T ss_pred -HhhcccCCcccccccc-----cccch------------hhhhhheecCCeEEEEEec
Confidence 2234567888887543 32211 1236788999999987543
No 346
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=56.97 E-value=13 Score=33.27 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=34.0
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHccc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 143 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F 143 (621)
..+|+|++.+.... ...+..+.++|+|||.+++-.+... ....+...+++..
T Consensus 93 ~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVE--SEQMLWALRKQFG 144 (178)
T ss_dssp SCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHH--HHHHHHHHHHHHC
T ss_pred CCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccc--cHHHHHHHHHHcC
Confidence 56888887665532 1134556789999999999887652 4455556666553
No 347
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=56.26 E-value=9.7 Score=35.91 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=25.0
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|+... . ....+..+.++|+|||.+|+-
T Consensus 132 ~~fD~v~~d~~~~--------~------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 132 EPFDFIFIDADKQ--------N------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCCSEEEECSCGG--------G------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCcCEEEEcCCcH--------H------HHHHHHHHHHhcCCCcEEEEe
Confidence 5799999997621 1 112345677899999999876
No 348
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=55.96 E-value=19 Score=38.03 Aligned_cols=65 Identities=15% Similarity=0.073 Sum_probs=38.2
Q ss_pred cccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHccc
Q psy13508 76 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 143 (621)
Q Consensus 76 ~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F 143 (621)
.+|+|++| .|.....+. +-..........+..|.++|+|||.+++=..... .....+...+.+.+
T Consensus 280 ~fD~Ii~d-pP~f~~~~~-~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~-~~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 280 PFHHVLLD-PPTLVKRPE-ELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH-LRLEDLLEVARRAA 344 (393)
T ss_dssp CEEEEEEC-CCCCCSSGG-GHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT-SCHHHHHHHHHHHH
T ss_pred CCCEEEEC-CCcCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC-CCHHHHHHHHHHHH
Confidence 39999999 344333222 2111223344445678999999999995555543 24455555555444
No 349
>3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae}
Probab=54.91 E-value=17 Score=39.45 Aligned_cols=42 Identities=26% Similarity=0.367 Sum_probs=33.4
Q ss_pred eeCCCcEEEEEeeeeeeccCcceeeeeeeeeeeeeeecCcccCC
Q psy13508 578 QLSPGTLVYGETVEEFKGQGASQVKLKTFHIIDAYLITGRSQVK 621 (621)
Q Consensus 578 ~lp~~t~~~~e~~~e~~~~g~~~~~~~~~hiiDa~~l~~~d~~~ 621 (621)
.++.+|||=||+|-.-.+.++ .....+.|.|.+.++|.|++.
T Consensus 124 ~~~~~TlLDGElV~d~~~~~~--~~~~~y~~FDlL~~~G~dl~~ 165 (461)
T 3kyh_C 124 TLQDGTLLDGELVIQTNPMTK--LQELRYLMFDCLAINGRCLTQ 165 (461)
T ss_dssp CCCCSEEEEEEEEEEECTTTC--CEEEEEEEEEEEEETTEECSS
T ss_pred ccCCCeEEEEEEEeccCCCCC--ccceEEEEEEEEeECCcCccc
Confidence 478999999999997544332 356688999999999999863
No 350
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=54.84 E-value=14 Score=37.80 Aligned_cols=69 Identities=12% Similarity=0.178 Sum_probs=43.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcccceeEEec
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~F~~v~~~K 150 (621)
..++|+|++|.. +..|.. .+ +. ..-+..+.+.|+|||.|++-.-... .+....++..+++.|..|..+.
T Consensus 187 ~~~fDvIi~d~~-~p~~~~--~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 258 (321)
T 2pt6_A 187 TNTYDVIIVDSS-DPIGPA--ET-----LFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYAN 258 (321)
T ss_dssp CSCEEEEEEECC-CSSSGG--GG-----GSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCceEEEECCc-CCCCcc--hh-----hhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEE
Confidence 457999999964 211211 11 11 2234556789999999999754321 0234567778888999987763
No 351
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=54.59 E-value=7.4 Score=40.84 Aligned_cols=36 Identities=22% Similarity=0.038 Sum_probs=21.9
Q ss_pred CCCCCcceEEEeccCC-ChhHHHHHHhcCCCCeEEEEecC
Q psy13508 312 LGPGELLYFADVCAGP-GGFSEYVLYRKKWRAKGIGFTLT 350 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaP-GGwsqyl~~r~~~~~k~~GvdL~ 350 (621)
+++|+ +||-+|+|| |-+.-.+++..+ ..++++++..
T Consensus 183 ~~~g~--~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~ 219 (398)
T 2dph_A 183 VKPGS--HVYIAGAGPVGRCAAAGARLLG-AACVIVGDQN 219 (398)
T ss_dssp CCTTC--EEEEECCSHHHHHHHHHHHHHT-CSEEEEEESC
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCC
Confidence 36787 889999755 333323333333 2389999865
No 352
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=54.56 E-value=13 Score=38.30 Aligned_cols=68 Identities=9% Similarity=0.008 Sum_probs=35.8
Q ss_pred CCcccEEEecCCCCCCCCh-hhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHccc
Q psy13508 74 GRGVHFMMADGGFSVEGQE-NIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSY 143 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~-~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F 143 (621)
+.++|+|++|--.-..+.. ...+. .......+..+.++|+|||.|++=...........+...+++.+
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~--~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~ 291 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQL--FDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETM 291 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEH--HHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHT
T ss_pred CCCceEEEECCccccCCchHHHHHH--HHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 4579999998521111101 01110 11122334667899999999766554443224455666666443
No 353
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=54.43 E-value=4.6 Score=38.40 Aligned_cols=55 Identities=13% Similarity=0.026 Sum_probs=33.9
Q ss_pred cccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 47 QCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 47 ~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
..++ .+||+.+...... . ...+|+|++|.. ..+. ....+.-+.++|+|||.+++=
T Consensus 122 ~~v~~~~~d~~~~~~~~~--------~-~~~~D~v~~~~~-------~~~~------~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 122 RNIVPILGDATKPEEYRA--------L-VPKVDVIFEDVA-------QPTQ------AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTEEEEECCTTCGGGGTT--------T-CCCEEEEEECCC-------STTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEEccCCCcchhhc--------c-cCCceEEEECCC-------CHhH------HHHHHHHHHHhcCCCCEEEEE
Confidence 3455 6888877432110 1 247999999976 1111 011144578899999999886
No 354
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=54.14 E-value=9.1 Score=41.12 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=39.6
Q ss_pred CcccEEEecCCCCCCCChh-----------hhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC-cChHHHHHHHHcc
Q psy13508 75 RGVHFMMADGGFSVEGQEN-----------IQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-PFSAGLLYLLYRS 142 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~-----------~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~-~~~~~l~~~l~~~ 142 (621)
..+|+|++|.-.+.+|... .+......+....+.-|..+|+|||.+|.=.+.-.. +....+.+.+.++
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 5699999996555555411 011111222233456688999999999955444321 1333344445553
Q ss_pred --ccee
Q psy13508 143 --YKQV 146 (621)
Q Consensus 143 --F~~v 146 (621)
|+.+
T Consensus 409 ~~~~~~ 414 (450)
T 2yxl_A 409 PEFKLV 414 (450)
T ss_dssp SSCEEC
T ss_pred CCCEEe
Confidence 5543
No 355
>3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A
Probab=52.35 E-value=25 Score=36.67 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=41.3
Q ss_pred cceeEEEeccCCCee----Ecccce--eeeCCCcEEEEEeeeeeeccCcceeeeeeeeeeeeeeecCcccC
Q psy13508 556 KHAIYRYREDSNRWV----SETSLG--IQLSPGTLVYGETVEEFKGQGASQVKLKTFHIIDAYLITGRSQV 620 (621)
Q Consensus 556 ~~~~~~~~~~~~~~~----~~~~~~--~~lp~~t~~~~e~~~e~~~~g~~~~~~~~~hiiDa~~l~~~d~~ 620 (621)
+..+|-++..+..|. +++... -.++.+|||=||||-.- ..|+ +...+.|-|.+.++|.|++
T Consensus 83 ~~~v~L~sR~~~~~~~~~~~FP~~~~~~~~~~~tvLDGElV~~~-~~g~---~~~~~~~FDlL~~~G~dl~ 149 (343)
T 3rtx_A 83 TNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDK-VNGQ---AVPRYLIYDIIKFNAQPVG 149 (343)
T ss_dssp TTCEEEECTTCCEEEETTCCCEETTEEEEECCSEEEEEEEEEEE-SSSS---EEEEEEEEEEEEBTTBCGG
T ss_pred CCEEEEEeCCCCeEEeccccCCcchhhhccCCCeEEEEEEEEec-CCCc---EeeEEEEEEEEeECCcCcc
Confidence 456777654445563 233221 23689999999999863 2342 2348999999999999985
No 356
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=52.24 E-value=9.4 Score=36.47 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=35.5
Q ss_pred cccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEc
Q psy13508 47 QCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 125 (621)
Q Consensus 47 ~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF 125 (621)
..++ ..||+.+..... .....+|+|++|.. ..+... ..+.-+..+|+|||.+++-++
T Consensus 126 ~~v~~~~~d~~~~~~~~---------~~~~~~D~V~~~~~-------~~~~~~------~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 126 TNIIPVIEDARHPHKYR---------MLIAMVDVIFADVA-------QPDQTR------IVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp TTEEEECSCTTCGGGGG---------GGCCCEEEEEECCC-------CTTHHH------HHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEcccCChhhhc---------ccCCcEEEEEEcCC-------CccHHH------HHHHHHHHHcCCCeEEEEEEc
Confidence 3454 688887753211 01357999999876 112211 112337789999999999655
Q ss_pred c
Q psy13508 126 D 126 (621)
Q Consensus 126 ~ 126 (621)
.
T Consensus 184 ~ 184 (233)
T 2ipx_A 184 A 184 (233)
T ss_dssp H
T ss_pred c
Confidence 4
No 357
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=52.24 E-value=15 Score=36.47 Aligned_cols=66 Identities=9% Similarity=0.027 Sum_probs=33.6
Q ss_pred CCcccEEEecCCCCCCCChh------hhHHH-HHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHH
Q psy13508 74 GRGVHFMMADGGFSVEGQEN------IQEIL-SKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLL 139 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~------~d~~~-~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l 139 (621)
...+|+|++|......|... .+... ...+....+.-|.++|+|||.+|.=...-......+.+..+
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~ 226 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYI 226 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHH
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHH
Confidence 35799999996554445422 11100 00122333566889999999998865443212334444443
No 358
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=51.94 E-value=12 Score=35.67 Aligned_cols=57 Identities=7% Similarity=-0.157 Sum_probs=35.9
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
.++|+|++|.. +... .+..+.++|+|||.+++-..... ...++...++..|..+..+
T Consensus 157 ~~~D~v~~~~~-------~~~~---------~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~f~~~~~~ 213 (248)
T 2yvl_A 157 GIFHAAFVDVR-------EPWH---------YLEKVHKSLMEGAPVGFLLPTAN--QVIKLLESIENYFGNLEVV 213 (248)
T ss_dssp TCBSEEEECSS-------CGGG---------GHHHHHHHBCTTCEEEEEESSHH--HHHHHHHHSTTTEEEEEEE
T ss_pred CcccEEEECCc-------CHHH---------HHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHhhCCcceEE
Confidence 46899998643 1111 23556789999999999776431 3455666665546665544
No 359
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=51.77 E-value=2.9 Score=41.71 Aligned_cols=79 Identities=4% Similarity=-0.137 Sum_probs=47.9
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCc---ChHHHHHHHHcc-cceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP---FSAGLLYLLYRS-YKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~---~~~~l~~~l~~~-F~~v~~~K 150 (621)
..+|+|++|... ...+ .+..+...|+|||.+++-.+...++ .....+..+.+. ...+...+
T Consensus 185 ~~~D~Vi~d~p~------~~~~---------~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (272)
T 3a27_A 185 DVADRVIMGYVH------KTHK---------FLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYE 249 (272)
T ss_dssp TCEEEEEECCCS------SGGG---------GHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCceEEEECCcc------cHHH---------HHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEeE
Confidence 468999999754 1222 2345678899999999998876321 233455555543 34555444
Q ss_pred CCCCCCCCceeeecccCC
Q psy13508 151 PNTSRPANSERYIVCKWK 168 (621)
Q Consensus 151 P~aSR~~s~E~y~v~~~~ 168 (621)
....|.-+...|.+|..+
T Consensus 250 ~~~v~~~~p~~~~~~~d~ 267 (272)
T 3a27_A 250 VRKIKKYAPGVWHVVVDA 267 (272)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEE
Confidence 555555555666655443
No 360
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=51.32 E-value=35 Score=32.34 Aligned_cols=64 Identities=14% Similarity=0.045 Sum_probs=41.0
Q ss_pred ccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 48 CVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 48 ~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
.++ .++|+.+......+.. +..+|+|++.+........+... .+.-+.++|+|||.+++--|.
T Consensus 102 ~~~~~~~d~~~~~~~~~~~~-------~~~~d~v~~~~~~~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 102 NISYRLLDGLVPEQAAQIHS-------EIGDANIYMRTGFHHIPVEKREL---------LGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp TEEEEECCTTCHHHHHHHHH-------HHCSCEEEEESSSTTSCGGGHHH---------HHHHHHHHHTTTCEEEEEEEC
T ss_pred CceEEECccccccccccccc-------ccCccEEEEcchhhcCCHHHHHH---------HHHHHHHHcCCCCEEEEEeCC
Confidence 455 6889988654433221 23589999987766553222221 234466899999999888886
Q ss_pred C
Q psy13508 127 M 127 (621)
Q Consensus 127 g 127 (621)
.
T Consensus 166 ~ 166 (245)
T 3ggd_A 166 T 166 (245)
T ss_dssp T
T ss_pred c
Confidence 5
No 361
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=51.06 E-value=6.7 Score=39.79 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=49.2
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcc-cceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
...+|+|++|..... +. .. .|. ...+..+.++|+|||.|++-.-... ......+...+++. |..|..+
T Consensus 167 ~~~fDvIi~d~~~~~-~~---~~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPA-GP---AS----KLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp TTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEEEECCCCcc-cc---ch----hhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 457999999864322 11 11 111 2234567789999999998642211 01346677788888 9988776
Q ss_pred cC-CCCCCCCceeeecccC
Q psy13508 150 KP-NTSRPANSERYIVCKW 167 (621)
Q Consensus 150 KP-~aSR~~s~E~y~v~~~ 167 (621)
.- -.+.|+..=.|++|..
T Consensus 239 ~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 239 LMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp ECCCTTSTTSCCEEEEEES
T ss_pred EeecccccCcceEEEEEeC
Confidence 32 2333344445666654
No 362
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=50.71 E-value=11 Score=36.43 Aligned_cols=43 Identities=9% Similarity=0.018 Sum_probs=28.3
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
...+|.|..|..+.......... ....+.-+.++|||||.|+.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~------~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQ------FNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHH------HHHHHHTHHHHEEEEEEEEE
T ss_pred ccCCceEEEeeeecccchhhhcc------hhhhhhhhhheeCCCCEEEE
Confidence 35689999998776655444332 11123456789999999973
No 363
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=50.57 E-value=11 Score=37.84 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=27.3
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
.+|+ .|||++||.|.....+.. . ..+++|+|+.+
T Consensus 234 ~~~~--~vlD~f~GsGt~~~~a~~-~--g~~~~g~e~~~ 267 (297)
T 2zig_A 234 FVGD--VVLDPFAGTGTTLIAAAR-W--GRRALGVELVP 267 (297)
T ss_dssp CTTC--EEEETTCTTTHHHHHHHH-T--TCEEEEEESCH
T ss_pred CCCC--EEEECCCCCCHHHHHHHH-c--CCeEEEEeCCH
Confidence 3466 899999999999988775 3 36899999863
No 364
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=50.29 E-value=13 Score=38.84 Aligned_cols=31 Identities=13% Similarity=-0.053 Sum_probs=25.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLT 350 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~ 350 (621)
.||++|.|||++|+.++.+.. ..+++++.+-
T Consensus 61 ~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D 91 (353)
T 1i4w_A 61 KVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKR 91 (353)
T ss_dssp EEEEESCTTCHHHHHHHHHHC-CSEEEEECCC
T ss_pred EEEEECCCCCHHHHHHHhhCC-CCEEEEEecC
Confidence 899999999999999998632 3578888653
No 365
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=49.29 E-value=14 Score=36.81 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=24.5
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLT 350 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~ 350 (621)
+|||||||.|=++-.+. +..+++|+|+.
T Consensus 108 ~VLDlGCG~gpLal~~~----~~~~y~a~DId 135 (253)
T 3frh_A 108 RVLDIACGLNPLALYER----GIASVWGCDIH 135 (253)
T ss_dssp EEEEETCTTTHHHHHHT----TCSEEEEEESB
T ss_pred eEEEecCCccHHHHHhc----cCCeEEEEeCC
Confidence 89999999999998665 67899999985
No 366
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=49.27 E-value=28 Score=35.24 Aligned_cols=52 Identities=13% Similarity=0.221 Sum_probs=31.6
Q ss_pred CcccEEEecCCCCCCCChh----------hhH-HHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 75 RGVHFMMADGGFSVEGQEN----------IQE-ILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~----------~d~-~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
..+|+|++|...+..|... .+. .....+....+.-|.++|+|||.+|.=...
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999996555455321 111 111223334456688999999999885543
No 367
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=49.14 E-value=23 Score=37.53 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=41.3
Q ss_pred ceeEEEeccCCCee----Ecccce------eeeCCCcEEEEEeeeeeeccCcceeeeeeeeeeeeeeecCcccCC
Q psy13508 557 HAIYRYREDSNRWV----SETSLG------IQLSPGTLVYGETVEEFKGQGASQVKLKTFHIIDAYLITGRSQVK 621 (621)
Q Consensus 557 ~~~~~~~~~~~~~~----~~~~~~------~~lp~~t~~~~e~~~e~~~~g~~~~~~~~~hiiDa~~l~~~d~~~ 621 (621)
..+|-|+..+..|. .++... -.++++|||=||||-.-.+.++ ....+.|.|.+.++|.|++.
T Consensus 85 ~~v~L~sR~~~~~~i~~~~FP~~~~~~~~~~~~~~~~vLDGElV~~~~~~~~---~~~~f~~FDlL~~~G~dl~~ 156 (395)
T 1p16_A 85 EGVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENRNVSE---PVLRYVIFDALAIHGKCIID 156 (395)
T ss_dssp EEEEEEETTCCEEECCSCCCCSCTTCCSSSCCCCSSEEEEEEEEEECCSSSC---CEEEEEEEEEEEETTEECTT
T ss_pred CEEEEEeCCCceEEeccccCCcccccccchhccCCcceeeeEEEEeccCCCc---ceeEEEEEEEEEECCeEccc
Confidence 34666654555553 344321 1458899999999976443222 34469999999999999863
No 368
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=49.07 E-value=13 Score=36.12 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=23.9
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|+. .... ...+..+..+|+|||.+|+=
T Consensus 135 ~~fD~V~~d~~-----~~~~---------~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 135 PAFDLIFIDAD-----KPNN---------PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCCSEEEECSC-----GGGH---------HHHHHHHHHTCCTTCEEEEE
T ss_pred CCeEEEEECCc-----hHHH---------HHHHHHHHHhcCCCeEEEEe
Confidence 47999999873 1111 11345567999999998873
No 369
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=49.02 E-value=23 Score=34.07 Aligned_cols=67 Identities=10% Similarity=0.065 Sum_probs=35.8
Q ss_pred ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 51 ~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
.++|+.+......+ ..+.++|+|+|+-.......+..+. ........+.-+.++|+|||.+++ +-..
T Consensus 150 ~~~D~~~~~~~~~~-------~~~~~fD~Iv~npp~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~-~~~~ 216 (250)
T 1o9g_A 150 RTADVFDPRALSAV-------LAGSAPDVVLTDLPYGERTHWEGQV--PGQPVAGLLRSLASALPAHAVIAV-TDRS 216 (250)
T ss_dssp EECCTTCGGGHHHH-------HTTCCCSEEEEECCGGGSSSSSSCC--CHHHHHHHHHHHHHHSCTTCEEEE-EESS
T ss_pred eecccccccccccc-------cCCCCceEEEeCCCeeccccccccc--cccHHHHHHHHHHHhcCCCcEEEE-eCcc
Confidence 47898874322111 0234799999984222122111100 011223344557889999999998 5444
No 370
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=48.55 E-value=15 Score=38.76 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=18.1
Q ss_pred CCCCcceEEEeccCCChhHHHHHHh
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYR 337 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r 337 (621)
.++. .++|+|||.|+|.-.+..+
T Consensus 194 ~~~~--~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 194 KAGR--VLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp CTTS--CEEETTCTTCHHHHHHHHH
T ss_pred CCCC--eEEEcCCCCCHHHHHHHHH
Confidence 3454 7999999999998877654
No 371
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=48.35 E-value=24 Score=32.76 Aligned_cols=83 Identities=10% Similarity=-0.011 Sum_probs=47.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC------------cChHHHHHHHHc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT------------PFSAGLLYLLYR 141 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~------------~~~~~l~~~l~~ 141 (621)
...+|+|++.+...... .+. ....+.-+.++|+|||.+++-+..+.. ....++...+.+
T Consensus 100 ~~~fD~v~~~~~l~~~~---~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVP---RDE------LADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAE 170 (211)
T ss_dssp CSCEEEEEECSCGGGSC---HHH------HHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHH
T ss_pred CCcEEEEEecCchhhcC---HHH------HHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHh
Confidence 45799999865432221 111 112345567899999999998765531 134566667765
Q ss_pred c--cceeEEecCCCCCCC-Cceeeecc
Q psy13508 142 S--YKQVCIFKPNTSRPA-NSERYIVC 165 (621)
Q Consensus 142 ~--F~~v~~~KP~aSR~~-s~E~y~v~ 165 (621)
. |+.+........... ..+.++.+
T Consensus 171 aG~f~~~~~~~~~~~~~~~~~~~wl~~ 197 (211)
T 3e23_A 171 AGTWASVAVESSEGKGFDQELAQFLHV 197 (211)
T ss_dssp HCCCSEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCcEEEEEEeccCCCCCCCCceEEEE
Confidence 4 887776643333332 33444433
No 372
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=47.89 E-value=12 Score=38.54 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=38.9
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe---EccCCCcChHHHHHHHHcccce
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK---VFDMFTPFSAGLLYLLYRSYKQ 145 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K---vF~g~~~~~~~l~~~l~~~F~~ 145 (621)
...+|+|++|..-.. +.. +.. .....+..+.++|+|||.||+- .|.+. ......+..+++.|..
T Consensus 192 ~~~fDlIi~d~~~p~-~~~--~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-~~~~~~~~~l~~~F~~ 258 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPI-GPA--KEL----FEKPFFQSVARALRPGGVVCTQAESLWLHM-DIIEDIVSNCREIFKG 258 (334)
T ss_dssp TTCEEEEEECCCCTT-SGG--GGG----GSHHHHHHHHHHEEEEEEEEEECCCTTTCH-HHHHHHHHHHHHHCSS
T ss_pred CCCccEEEECCCCcc-Ccc--hhh----hHHHHHHHHHHhcCCCcEEEEecCCccccH-HHHHHHHHHHHHhCcc
Confidence 357999999975222 211 110 0112345677899999999996 33332 1234567778888984
No 373
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=47.48 E-value=14 Score=37.89 Aligned_cols=67 Identities=13% Similarity=0.196 Sum_probs=39.9
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHH-HHHHHHHHHhcCCCCEEEEeE---ccCCCcChHHHHHHHHcccceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLY-LCQFLVSLFIVRPEGHFVCKV---FDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~-l~~l~~A~~~L~~gG~fV~Kv---F~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..++|+|++|..-.. +. . ..|. ..-+..+.++|+|||.+++-. +.. ......+...+++.|..|..+
T Consensus 179 ~~~fD~Ii~d~~~~~-~~---~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~-~~~~~~~~~~l~~vF~~v~~~ 249 (314)
T 2b2c_A 179 KNEFDVIITDSSDPV-GP---A----ESLFGQSYYELLRDALKEDGILSSQGESVWLH-LPLIAHLVAFNRKIFPAVTYA 249 (314)
T ss_dssp TTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTC-HHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCceEEEEcCCCCC-Cc---c----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccC-HHHHHHHHHHHHHHCCcceEE
Confidence 457999999874211 10 1 1122 233456788999999999974 211 123456777888889988654
No 374
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=47.48 E-value=16 Score=36.35 Aligned_cols=69 Identities=17% Similarity=0.208 Sum_probs=41.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHH-HHHHHHHHHHhcCCCCEEEEeEccC--CCcChHHHHHHHHcccceeEEec
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRL-YLCQFLVSLFIVRPEGHFVCKVFDM--FTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L-~l~~l~~A~~~L~~gG~fV~KvF~g--~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
..++|+|++|..-.. |.. . .| ...-+..+.++|+|||.|++-.-.- ..+....+...++..|..+..+.
T Consensus 150 ~~~fD~Ii~d~~~~~-~~~---~----~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~ 221 (281)
T 1mjf_A 150 NRGFDVIIADSTDPV-GPA---K----VLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYS 221 (281)
T ss_dssp CCCEEEEEEECCCCC-------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred cCCeeEEEECCCCCC-Ccc---h----hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEE
Confidence 347999999975322 210 0 11 1112345678999999999874221 11234566677888899887653
No 375
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=47.08 E-value=9.9 Score=35.34 Aligned_cols=41 Identities=7% Similarity=-0.002 Sum_probs=29.8
Q ss_pred HHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEe
Q psy13508 107 FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 107 l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
+.-+.++|+|||.+++-.+... ....+...+.+. |+.+...
T Consensus 142 l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 142 IPQLDSHLNEDGQVIFSGIDYL--QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp GGGSGGGEEEEEEEEEEEEEGG--GHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEecCcc--cHHHHHHHHHHcCCceEEee
Confidence 4557789999999999766553 456777777655 8777655
No 376
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=46.88 E-value=29 Score=36.08 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=32.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 128 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~ 128 (621)
+.++|+|++|--.-..+.....+ ........+..+..+|+|||.+++-.....
T Consensus 277 ~~~fD~Ii~dpP~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGKKDVER--AYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp TCCEEEEEECCCCSCCSTTSHHH--HHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCeeEEEECCCCCCCChhHHHH--HHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 45799999985221111122222 112333345668899999999999887653
No 377
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=46.57 E-value=8.8 Score=39.42 Aligned_cols=101 Identities=13% Similarity=0.192 Sum_probs=51.7
Q ss_pred CCCCCcceEEEeccCCChhHHHHH--HhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVL--YRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~--~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +||=.|+| +--.++. -+. ..+ ++++++..+.. + .+..-.|.+..=|..+.+..+.
T Consensus 164 ~~~g~--~VlV~GaG--~vG~~a~qla~~-~Ga~~Vi~~~~~~~~---~---------~~~~~lGa~~vi~~~~~~~~~~ 226 (352)
T 3fpc_A 164 IKLGD--TVCVIGIG--PVGLMSVAGANH-LGAGRIFAVGSRKHC---C---------DIALEYGATDIINYKNGDIVEQ 226 (352)
T ss_dssp CCTTC--CEEEECCS--HHHHHHHHHHHT-TTCSSEEEECCCHHH---H---------HHHHHHTCCEEECGGGSCHHHH
T ss_pred CCCCC--EEEEECCC--HHHHHHHHHHHH-cCCcEEEEECCCHHH---H---------HHHHHhCCceEEcCCCcCHHHH
Confidence 36777 67777864 4433322 222 234 79998764210 0 0111234321112222233333
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 450 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F 450 (621)
+.+.+.+.++|+|+- +.|.... +..++..|++||.+|+=-+
T Consensus 227 ----v~~~t~g~g~D~v~d-----~~g~~~~------------~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 227 ----ILKATDGKGVDKVVI-----AGGDVHT------------FAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp ----HHHHTTTCCEEEEEE-----CSSCTTH------------HHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHcCCCCCCEEEE-----CCCChHH------------HHHHHHHHhcCCEEEEecc
Confidence 444466778999983 2333211 1236788999999986543
No 378
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=46.53 E-value=31 Score=36.01 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=36.6
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR 141 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~ 141 (621)
+.++|+|++|--.-........+ ........+..+..+|+|||.+++-..... .....+...+..
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~-~~~~~~~~~v~~ 351 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKA--GLRAYFNVNFAGLNLVKDGGILVTCSCSQH-VDLQMFKDMIIA 351 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHH--HHHHHHHHHHHHHTTEEEEEEEEEEECCTT-SCHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCHHHHHH--HHHHHHHHHHHHHHhcCCCcEEEEEECCCC-CCHHHHHHHHHH
Confidence 45799999994221111112221 112233344668899999999998887763 133334444443
No 379
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=46.23 E-value=16 Score=38.79 Aligned_cols=36 Identities=14% Similarity=-0.067 Sum_probs=28.2
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCC-CCeEEEEec
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKW-RAKGIGFTL 349 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~-~~k~~GvdL 349 (621)
+++++ .|+|+||.-|.+|-+++.+..+ .++++++.-
T Consensus 224 l~~~~--~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP 260 (409)
T 2py6_A 224 FSDSE--KMVDCGASIGESLAGLIGVTKGKFERVWMIEP 260 (409)
T ss_dssp CCSSC--EEEEETCTTSHHHHHHHHHHTSCCSEEEEECC
T ss_pred cCCCC--EEEECCCCcCHHHHHHHHHhcCCCCEEEEEcC
Confidence 36676 8999999999999988744444 489999853
No 380
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=46.17 E-value=12 Score=38.67 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=50.3
Q ss_pred CCCCCcceEEEeccCCCh-hHHHHHHhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 312 LGPGELLYFADVCAGPGG-FSEYVLYRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGG-wsqyl~~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
+++|+ +||-+|+|+=| ..-.+++.. .+ ++++++..+.. + .+..-.|.+..-|..+.+..+.+
T Consensus 188 ~~~g~--~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~---~---------~~a~~lGa~~vi~~~~~~~~~~~ 251 (371)
T 1f8f_A 188 VTPAS--SFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESR---L---------ELAKQLGATHVINSKTQDPVAAI 251 (371)
T ss_dssp CCTTC--EEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHH---H---------HHHHHHTCSEEEETTTSCHHHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHH---H---------HHHHHcCCCEEecCCccCHHHHH
Confidence 36787 78889875523 222233333 34 68998865311 0 01112243211122222333333
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
. +.+.+ ++|+|+- +.|... .+..++..|++||.+|+=
T Consensus 252 ~----~~~~g-g~D~vid-----~~g~~~------------~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 252 K----EITDG-GVNFALE-----STGSPE------------ILKQGVDALGILGKIAVV 288 (371)
T ss_dssp H----HHTTS-CEEEEEE-----CSCCHH------------HHHHHHHTEEEEEEEEEC
T ss_pred H----HhcCC-CCcEEEE-----CCCCHH------------HHHHHHHHHhcCCEEEEe
Confidence 3 33444 8999873 333221 123468899999999873
No 381
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=45.44 E-value=24 Score=36.13 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=50.1
Q ss_pred CCCCCcceEEEeccCC-ChhHHHHHHhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCC--C-hhhH
Q psy13508 312 LGPGELLYFADVCAGP-GGFSEYVLYRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVY--D-PENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaP-GGwsqyl~~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~--~-~~~~ 386 (621)
+++|+ +||-.|+|+ |-+.-.+++.. .+ ++++++..+.. + .+..-.|.+..-|.. + .+..
T Consensus 169 ~~~g~--~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~---~---------~~a~~lGa~~vi~~~~~~~~~~~ 232 (356)
T 1pl8_A 169 VTLGH--KVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATR---L---------SKAKEIGADLVLQISKESPQEIA 232 (356)
T ss_dssp CCTTC--EEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHH---H---------HHHHHTTCSEEEECSSCCHHHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHH---H---------HHHHHhCCCEEEcCcccccchHH
Confidence 36777 788888644 22222233332 35 89998865311 0 011123432111222 1 2223
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+. +.+.+. .++|+|+- +.|.... +..++.+|++||.+|+=
T Consensus 233 ~~----i~~~~~-~g~D~vid-----~~g~~~~------------~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 233 RK----VEGQLG-CKPEVTIE-----CTGAEAS------------IQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HH----HHHHHT-SCCSEEEE-----CSCCHHH------------HHHHHHHSCTTCEEEEC
T ss_pred HH----HHHHhC-CCCCEEEE-----CCCChHH------------HHHHHHHhcCCCEEEEE
Confidence 33 333343 68999873 3443211 22467889999999874
No 382
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=45.39 E-value=27 Score=32.80 Aligned_cols=49 Identities=14% Similarity=-0.004 Sum_probs=33.7
Q ss_pred cccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc
Q psy13508 76 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS 142 (621)
Q Consensus 76 ~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~ 142 (621)
.+|+|+++++. + .. .+..+.++|+|||.+|+-..... ....+...+++.
T Consensus 122 ~~D~v~~~~~~--------~------~~--~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGGG--------S------QA--LYDRLWEWLAPGTRIVANAVTLE--SETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSCC--------C------HH--HHHHHHHHSCTTCEEEEEECSHH--HHHHHHHHHHHH
T ss_pred CCCEEEECCcc--------c------HH--HHHHHHHhcCCCcEEEEEecCcc--cHHHHHHHHHhC
Confidence 68888877632 1 11 34556789999999999887652 556666666655
No 383
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=45.28 E-value=15 Score=37.24 Aligned_cols=68 Identities=10% Similarity=0.146 Sum_probs=39.7
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHH-HHHHHHHHHHhcCCCCEEEEeEccCC--CcChHHHHHHHHcccceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRL-YLCQFLVSLFIVRPEGHFVCKVFDMF--TPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L-~l~~l~~A~~~L~~gG~fV~KvF~g~--~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..++|+|++|..-.. +.. . .+ ...-+..+.++|+|||.||+-...-. ......+...+++.|..+...
T Consensus 166 ~~~fD~Ii~d~~~~~-~~~---~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~ 236 (304)
T 2o07_A 166 QDAFDVIITDSSDPM-GPA---E----SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYA 236 (304)
T ss_dssp SSCEEEEEEECC-------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCceEEEECCCCCC-Ccc---h----hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeE
Confidence 357999999864221 110 0 01 11224556789999999999763221 112456667788889988654
No 384
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=44.82 E-value=9.2 Score=37.28 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=25.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
...+|+|++|+.. ... ...+..+..+|+|||.+|+=
T Consensus 134 ~~~fD~V~~d~~~-----~~~---------~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDADK-----TNY---------LNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESCG-----GGH---------HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEEcCCh-----HHh---------HHHHHHHHHhcCCCeEEEEE
Confidence 3579999999751 111 11345567999999999983
No 385
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=44.48 E-value=12 Score=35.86 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=23.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
.++|+|++|+.+.. ....+..+..+|+|||.+|+
T Consensus 141 ~~fD~V~~~~~~~~--------------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 141 KVYDMIFIDAAKAQ--------------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp SCEEEEEEETTSSS--------------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEEcCcHHH--------------HHHHHHHHHHhcCCCeEEEE
Confidence 57999998864221 11134567799999999988
No 386
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=44.48 E-value=14 Score=38.40 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=50.6
Q ss_pred CCCCcceEEEeccCCChhHHHHH--HhcCCC-CeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVL--YRKKWR-AKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~--~r~~~~-~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
++|+ +||-.|+ ||--+.+. -+. .. +++++++..+.. + .+..-.|.+..-|..... ...+
T Consensus 194 ~~g~--~VlV~Ga--G~vG~~aiqlak~-~Ga~~Vi~~~~~~~~---~---------~~~~~lGa~~vi~~~~~~-~~~~ 255 (380)
T 1vj0_A 194 FAGK--TVVIQGA--GPLGLFGVVIARS-LGAENVIVIAGSPNR---L---------KLAEEIGADLTLNRRETS-VEER 255 (380)
T ss_dssp CBTC--EEEEECC--SHHHHHHHHHHHH-TTBSEEEEEESCHHH---H---------HHHHHTTCSEEEETTTSC-HHHH
T ss_pred CCCC--EEEEECc--CHHHHHHHHHHHH-cCCceEEEEcCCHHH---H---------HHHHHcCCcEEEeccccC-cchH
Confidence 5677 7899995 44433322 122 24 589998865311 0 011123432111222000 1123
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
.+.+.+.+.+.++|+|+- +.|.... +..++.+|++||.+|+=
T Consensus 256 ~~~v~~~~~g~g~Dvvid-----~~g~~~~------------~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 256 RKAIMDITHGRGADFILE-----ATGDSRA------------LLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHHHTTTSCEEEEEE-----CSSCTTH------------HHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCCCCcEEEE-----CCCCHHH------------HHHHHHHHhcCCEEEEE
Confidence 333444455668999873 3332211 12367889999999864
No 387
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=44.43 E-value=42 Score=31.83 Aligned_cols=68 Identities=7% Similarity=-0.122 Sum_probs=40.1
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC------------CcChHHHHHHHHcc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF------------TPFSAGLLYLLYRS 142 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~------------~~~~~~l~~~l~~~ 142 (621)
..+|+|++++....-. +. -....+.-+.++|+|||.+++..+... .....++...+.+.
T Consensus 145 ~~fD~v~~~~~l~~~~----~~-----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 215 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLT----DQ-----HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSA 215 (241)
T ss_dssp SCEEEEEEESCGGGSC----HH-----HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHT
T ss_pred CCEEEEEEcchhhhCC----HH-----HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHc
Confidence 3588888776432211 11 112234557789999999999664321 00245666677655
Q ss_pred -cceeEEecC
Q psy13508 143 -YKQVCIFKP 151 (621)
Q Consensus 143 -F~~v~~~KP 151 (621)
|+.+.....
T Consensus 216 Gf~~~~~~~~ 225 (241)
T 2ex4_A 216 GLSLLAEERQ 225 (241)
T ss_dssp TCCEEEEEEC
T ss_pred CCeEEEeeec
Confidence 877776643
No 388
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=44.38 E-value=5.1 Score=40.57 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=27.2
Q ss_pred eEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 319 YFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
+|||||||.|=++..+.. ..+.++++|+|+.+
T Consensus 135 ~VLDLGCG~GpLAl~~~~-~~p~a~y~a~DId~ 166 (281)
T 3lcv_B 135 TLRDLACGLNPLAAPWMG-LPAETVYIASDIDA 166 (281)
T ss_dssp EEEETTCTTGGGCCTTTT-CCTTCEEEEEESBH
T ss_pred eeeeeccCccHHHHHHHh-hCCCCEEEEEeCCH
Confidence 899999999999997765 44688999999863
No 389
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=44.09 E-value=10 Score=35.71 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=24.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|+.. .. ....+..+..+|+|||.+|+-
T Consensus 139 ~~fD~v~~~~~~--------~~------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 139 WQYDLIYIDADK--------AN------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TCEEEEEECSCG--------GG------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccEEEECCCH--------HH------HHHHHHHHHHhcCCCcEEEEe
Confidence 579999998841 11 111345567899999999873
No 390
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=43.62 E-value=13 Score=34.47 Aligned_cols=97 Identities=23% Similarity=0.239 Sum_probs=51.6
Q ss_pred CCCCCcceEEEeccCCChhHHHH---HHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYV---LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +++-.|++ ||.-..+ +... .+++++++..+.. ++.. ...|.+..-|..+.+..+.
T Consensus 36 ~~~g~--~vlV~Ga~-ggiG~~~~~~~~~~--G~~V~~~~~~~~~---~~~~---------~~~g~~~~~d~~~~~~~~~ 98 (198)
T 1pqw_A 36 LSPGE--RVLIHSAT-GGVGMAAVSIAKMI--GARIYTTAGSDAK---REML---------SRLGVEYVGDSRSVDFADE 98 (198)
T ss_dssp CCTTC--EEEETTTT-SHHHHHHHHHHHHH--TCEEEEEESSHHH---HHHH---------HTTCCSEEEETTCSTHHHH
T ss_pred CCCCC--EEEEeeCC-ChHHHHHHHHHHHc--CCEEEEEeCCHHH---HHHH---------HHcCCCEEeeCCcHHHHHH
Confidence 36676 78888853 3333322 2223 4689988764210 0000 0123322335555554444
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
+.+. +.+.++|+|+.-. |... +..++..|++||.+|+
T Consensus 99 ~~~~----~~~~~~D~vi~~~-----g~~~-------------~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 99 ILEL----TDGYGVDVVLNSL-----AGEA-------------IQRGVQILAPGGRFIE 135 (198)
T ss_dssp HHHH----TTTCCEEEEEECC-----CTHH-------------HHHHHHTEEEEEEEEE
T ss_pred HHHH----hCCCCCeEEEECC-----chHH-------------HHHHHHHhccCCEEEE
Confidence 4332 3445799998533 3211 2246788999999886
No 391
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=43.58 E-value=25 Score=35.72 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=54.3
Q ss_pred CCCCCcceEEEeccC-CChh-HHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 312 LGPGELLYFADVCAG-PGGF-SEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 312 ~~~g~~~~vlDLcaa-PGGw-sqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
+++|+ +||-.|+| +=|. .--++... .+++++++..+.. ++ +..-.|.+..-|..+.+..+.+
T Consensus 142 ~~~g~--~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~---~~---------~~~~lga~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 142 LQRND--VLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKH---TE---------ELLRLGAAYVIDTSTAPLYETV 205 (340)
T ss_dssp CCTTC--EEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTT---HH---------HHHHHTCSEEEETTTSCHHHHH
T ss_pred cCCCC--EEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHH---HH---------HHHhCCCcEEEeCCcccHHHHH
Confidence 46787 78888876 2222 22223333 4689999875421 11 1111343322244444444443
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
. +.+.+.++|+|+. +.|..... .++..|++||.+|+=-..
T Consensus 206 ~----~~~~~~g~Dvvid-----~~g~~~~~-------------~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 206 M----ELTNGIGADAAID-----SIGGPDGN-------------ELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp H----HHTTTSCEEEEEE-----SSCHHHHH-------------HHHHTEEEEEEEEECCCT
T ss_pred H----HHhCCCCCcEEEE-----CCCChhHH-------------HHHHHhcCCCEEEEEeec
Confidence 3 3456678998874 33432221 123689999999875443
No 392
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=43.11 E-value=69 Score=30.08 Aligned_cols=65 Identities=11% Similarity=0.070 Sum_probs=38.3
Q ss_pred cccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC--------cChHHHHHHHHcc-ccee
Q psy13508 76 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT--------PFSAGLLYLLYRS-YKQV 146 (621)
Q Consensus 76 ~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~--------~~~~~l~~~l~~~-F~~v 146 (621)
.+|+|++-+....-...+. ...+.-+.++|+|||.+++=.|.... ....++...+.+. |+.+
T Consensus 132 ~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMR---------PAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp CEEEEEEESSTTTSCGGGH---------HHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred CeeEEEEChhhhcCCHHHH---------HHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 6788876544433211111 12345567899999999986664311 1235677777765 8776
Q ss_pred EEe
Q psy13508 147 CIF 149 (621)
Q Consensus 147 ~~~ 149 (621)
...
T Consensus 203 ~~~ 205 (235)
T 3lcc_A 203 SVE 205 (235)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 393
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=42.88 E-value=27 Score=37.88 Aligned_cols=51 Identities=18% Similarity=0.125 Sum_probs=31.4
Q ss_pred CCcccEEEecCCCCCCCChh----------h-hHHHHHHHHHHHHHHHHHhcCCCCEEEEeE
Q psy13508 74 GRGVHFMMADGGFSVEGQEN----------I-QEILSKRLYLCQFLVSLFIVRPEGHFVCKV 124 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~----------~-d~~~~~~L~l~~l~~A~~~L~~gG~fV~Kv 124 (621)
...+|+|++|.--+-+|... . +-.....+....+.-|..+|+|||.+|.=.
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 35799999996655455321 1 111122333444566889999999999543
No 394
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=42.64 E-value=31 Score=32.47 Aligned_cols=58 Identities=9% Similarity=0.014 Sum_probs=33.9
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc--ccee
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS--YKQV 146 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~--F~~v 146 (621)
.++|+|++|+... .... .+..+..+ .+|+|||.+|+.-..- +....+...++.. |+.+
T Consensus 133 ~~fD~V~~d~~~~-----~~~~------~~~~~~~~-~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 133 DTLDMVFLDHWKD-----RYLP------DTLLLEKC-GLLRKGTVLLADNVIV--PGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp CCCSEEEECSCGG-----GHHH------HHHHHHHT-TCCCTTCEEEESCCCC--CCCHHHHHHHHHCTTEEEE
T ss_pred CceEEEEEcCCcc-----cchH------HHHHHHhc-cccCCCeEEEEeCCCC--cchHHHHHHHhhCCCceEE
Confidence 5799999996432 1111 11112223 8999999999875443 2446666666543 4443
No 395
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=42.59 E-value=26 Score=35.75 Aligned_cols=87 Identities=10% Similarity=0.103 Sum_probs=51.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHH-HHHHHHhcCCCCEEEEeEcc--CCCcChHHHHHHHHcccceeEEec
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQ-FLVSLFIVRPEGHFVCKVFD--MFTPFSAGLLYLLYRSYKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~-l~~A~~~L~~gG~fV~KvF~--g~~~~~~~l~~~l~~~F~~v~~~K 150 (621)
..++|+|+.|..-.. |... . |.-.+ ...+.+.|+|||.||+-.=. ...+.....+..+++.|..|..+-
T Consensus 155 ~~~yDvIi~D~~dp~-~~~~--~-----L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~ 226 (294)
T 3o4f_A 155 SQTFDVIISDCTDPI-GPGE--S-----LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQ 226 (294)
T ss_dssp SCCEEEEEESCCCCC-CTTC--C-----SSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEE
T ss_pred cccCCEEEEeCCCcC-CCch--h-----hcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeee
Confidence 357899999975332 3221 0 11111 24567899999999986311 111245667778888999998774
Q ss_pred CC-CCCCCCceeeecccCC
Q psy13508 151 PN-TSRPANSERYIVCKWK 168 (621)
Q Consensus 151 P~-aSR~~s~E~y~v~~~~ 168 (621)
.. .|-|+..=.|.+|...
T Consensus 227 ~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 227 AAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp ECCTTSSSSCEEEEEEESC
T ss_pred eeeccCCCcceeheeEECC
Confidence 33 2234444456666643
No 396
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=42.37 E-value=18 Score=35.46 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=23.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 124 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~Kv 124 (621)
..+|+|.+|.+-. ++. ...+.-|..+|||||.|++=+
T Consensus 146 ~~vDvVf~d~~~~-------~~~------~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 146 EGVDGLYADVAQP-------EQA------AIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CCEEEEEECCCCT-------THH------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEEEeccCC-------hhH------HHHHHHHHHhccCCCEEEEEE
Confidence 4688888875422 110 112445678999999998743
No 397
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=42.27 E-value=25 Score=34.55 Aligned_cols=44 Identities=9% Similarity=-0.065 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEecCC
Q psy13508 106 QFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFKPN 152 (621)
Q Consensus 106 ~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~KP~ 152 (621)
-+..+..+|+|||.+++-.-.. ....+...+++. |+.+..++..
T Consensus 220 ~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~~Gf~~v~~~~d~ 264 (276)
T 2b3t_A 220 IIEQSRNALVSGGFLLLEHGWQ---QGEAVRQAFILAGYHDVETCRDY 264 (276)
T ss_dssp HHHHHGGGEEEEEEEEEECCSS---CHHHHHHHHHHTTCTTCCEEECT
T ss_pred HHHHHHHhcCCCCEEEEEECch---HHHHHHHHHHHCCCcEEEEEecC
Confidence 3456889999999999864222 445666666654 8877777543
No 398
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=42.18 E-value=15 Score=35.83 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=23.7
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
..+|+|++|+.. .+. ...+..+..+|+|||.+|+
T Consensus 155 ~~fD~V~~d~~~-----~~~---------~~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 155 GSYDFIFVDADK-----DNY---------LNYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp TCBSEEEECSCS-----TTH---------HHHHHHHHHHBCTTCCEEE
T ss_pred CCEEEEEEcCch-----HHH---------HHHHHHHHHhCCCCeEEEE
Confidence 579999999652 111 1224556789999999986
No 399
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=42.15 E-value=35 Score=30.87 Aligned_cols=65 Identities=11% Similarity=-0.051 Sum_probs=35.3
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC-----------cChHHHHHHHHccc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-----------PFSAGLLYLLYRSY 143 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~-----------~~~~~l~~~l~~~F 143 (621)
..+|+|++.+........+. ...+.-+.++|+|||.+++-.+-... -...++...+.. |
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-f 165 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTI---------PGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG-W 165 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGH---------HHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT-S
T ss_pred CCceEEEEcchhhhCCHHHH---------HHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC-C
Confidence 46788887664432211111 11345567899999998775432210 022455555555 7
Q ss_pred ceeEEe
Q psy13508 144 KQVCIF 149 (621)
Q Consensus 144 ~~v~~~ 149 (621)
+-+...
T Consensus 166 ~~~~~~ 171 (199)
T 2xvm_A 166 ERVKYN 171 (199)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 666544
No 400
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=42.11 E-value=18 Score=36.83 Aligned_cols=49 Identities=12% Similarity=-0.078 Sum_probs=31.4
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR 141 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~ 141 (621)
..+|+|++|+..... .+..+.++|+|||.+++-.... .....++..+++
T Consensus 186 ~~fD~V~~~~~~~~~----------------~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~ 234 (336)
T 2b25_A 186 LTFDAVALDMLNPHV----------------TLPVFYPHLKHGGVCAVYVVNI--TQVIELLDGIRT 234 (336)
T ss_dssp --EEEEEECSSSTTT----------------THHHHGGGEEEEEEEEEEESSH--HHHHHHHHHHHH
T ss_pred CCeeEEEECCCCHHH----------------HHHHHHHhcCCCcEEEEEeCCH--HHHHHHHHHHHh
Confidence 368999998742211 2456788999999999766644 244555565554
No 401
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=41.88 E-value=15 Score=34.84 Aligned_cols=63 Identities=14% Similarity=0.066 Sum_probs=34.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC---CCcChHHHH----HHHHcccceeE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM---FTPFSAGLL----YLLYRSYKQVC 147 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g---~~~~~~~l~----~~l~~~F~~v~ 147 (621)
..+|+|++|++.. ++ ... .+.-+.++|||||.|++=+-.+ ......++. ..+++.|+-+.
T Consensus 125 ~~fD~V~~~~~~~-------~~---~~~---~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~ 191 (210)
T 1nt2_A 125 EKVDLIYQDIAQK-------NQ---IEI---LKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGDFKIVK 191 (210)
T ss_dssp CCEEEEEECCCST-------TH---HHH---HHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred cceeEEEEeccCh-------hH---HHH---HHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhhcEEee
Confidence 4799999995321 11 011 1344678999999998764221 011223332 23555587777
Q ss_pred Eec
Q psy13508 148 IFK 150 (621)
Q Consensus 148 ~~K 150 (621)
...
T Consensus 192 ~~~ 194 (210)
T 1nt2_A 192 HGS 194 (210)
T ss_dssp EEE
T ss_pred eec
Confidence 654
No 402
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=41.70 E-value=47 Score=35.83 Aligned_cols=51 Identities=10% Similarity=0.107 Sum_probs=30.7
Q ss_pred CcccEEEecCCCCCCCChhhh-----------HHHHHHHHHHHHHHHHHhcCCCCEEEEeEc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQ-----------EILSKRLYLCQFLVSLFIVRPEGHFVCKVF 125 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d-----------~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF 125 (621)
..+|+|++|.--+-+|....+ -.....+...-+.-|..+|+|||.+|.=..
T Consensus 174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 579999999654444432111 111122333445668999999999985433
No 403
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=41.56 E-value=15 Score=35.43 Aligned_cols=60 Identities=13% Similarity=0.013 Sum_probs=38.7
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc---cceeEEec
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS---YKQVCIFK 150 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~---F~~v~~~K 150 (621)
...+|+|++|.... . ..+.-+.++|+|||.+++=.... .....+...+++. |..+..+.
T Consensus 160 ~~~~D~v~~~~~~~-------~---------~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 160 EENVDHVILDLPQP-------E---------RVVEHAAKALKPGGFFVAYTPCS--NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp CCSEEEEEECSSCG-------G---------GGHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred CCCcCEEEECCCCH-------H---------HHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHcCCCccccEEEE
Confidence 34689999875311 1 12455678999999999865433 1345666666655 88887774
Q ss_pred C
Q psy13508 151 P 151 (621)
Q Consensus 151 P 151 (621)
.
T Consensus 222 ~ 222 (255)
T 3mb5_A 222 V 222 (255)
T ss_dssp C
T ss_pred E
Confidence 3
No 404
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=41.45 E-value=13 Score=41.07 Aligned_cols=131 Identities=13% Similarity=0.126 Sum_probs=69.9
Q ss_pred eEEEeccCCChhHHHHHHhcC--CCCeEEEEecCCCCCCCCCcccCCCCCCccccCCC------cccccCCChhhHHHHH
Q psy13508 319 YFADVCAGPGGFSEYVLYRKK--WRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGV------KGNGDVYDPENILSLH 390 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~~--~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv------~~~GDI~~~~~~~~l~ 390 (621)
+|+|.|||.|||.-.+..+.. ....++|+++.+.. +.+-+ .++ ...|+ ...||.......
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~-~~lA~------~Nl-~l~gi~~~~~~I~~gDtL~~d~p---- 291 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTST-YNLAR------MNM-ILHGVPIENQFLHNADTLDEDWP---- 291 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHH-HHHHH------HHH-HHTTCCGGGEEEEESCTTTSCSC----
T ss_pred EEeecccchhHHHHHHHHHHHhccCceEEEEECcHHH-HHHHH------HHH-HHcCCCcCccceEecceeccccc----
Confidence 899999999999988877642 25689999987520 00000 000 01122 235666542100
Q ss_pred HHHHhhcCCCcccEEEecCCCCCC--Cchh--hHH----H----HHHHHHHHHHHhhhhccC-CCcEEEEEEccC--CCC
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVE--GQEN--IQE----I----LSKRLYLCQFLVSLFIVR-PEGHFVCKVFDM--FTP 455 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~--G~~~--~de----~----~~~~L~l~~l~~al~~Lr-~GG~fV~K~F~~--~~~ 455 (621)
.....++|+|++.=-+... +... .+. . -.....++-+.-++..|+ +||.+++=+-.+ +..
T Consensus 292 -----~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~ 366 (542)
T 3lkd_A 292 -----TQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRG 366 (542)
T ss_dssp -----CSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCC
T ss_pred -----ccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCC
Confidence 0135689999998433321 1111 010 0 001123444557889999 999987766553 111
Q ss_pred -ChHHHHHHHHh
Q psy13508 456 -FSAGLLYLLYR 466 (621)
Q Consensus 456 -~s~~ll~~l~~ 466 (621)
....+...|-.
T Consensus 367 ~~~~~iRk~Lle 378 (542)
T 3lkd_A 367 NAEGTIRKALLE 378 (542)
T ss_dssp THHHHHHHHHHH
T ss_pred chhHHHHHHHHh
Confidence 13456655443
No 405
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=40.81 E-value=18 Score=38.36 Aligned_cols=69 Identities=13% Similarity=0.034 Sum_probs=38.1
Q ss_pred CCcccEEEecCCCCCCCChhh-----------hHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC-cChHHHHHHHHc
Q psy13508 74 GRGVHFMMADGGFSVEGQENI-----------QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT-PFSAGLLYLLYR 141 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~-----------d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~-~~~~~l~~~l~~ 141 (621)
+.++|+|++|.--+.+|.... +......+....+.-|..+|+|||.+|.=...-.. +....+...+.+
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~ 392 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHh
Confidence 457999999965444443211 11111223334456688999999999976543321 233334444554
Q ss_pred c
Q psy13508 142 S 142 (621)
Q Consensus 142 ~ 142 (621)
+
T Consensus 393 ~ 393 (429)
T 1sqg_A 393 T 393 (429)
T ss_dssp C
T ss_pred C
Confidence 3
No 406
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=40.64 E-value=39 Score=31.29 Aligned_cols=63 Identities=13% Similarity=0.034 Sum_probs=41.5
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEE
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCI 148 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~ 148 (621)
...+|+|++..+.. ..+.. ..+.-+.++|+|||.+++-.+........++...+.+. |+.+..
T Consensus 113 ~~~fD~v~~~~~l~---~~~~~---------~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 113 DESVDVAVFCLSLM---GTNIR---------DFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp TTCEEEEEEESCCC---SSCHH---------HHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred CCCEeEEEEehhcc---ccCHH---------HHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 45799999876653 11111 12344678999999999977665323456777778765 877664
No 407
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=40.59 E-value=25 Score=33.47 Aligned_cols=46 Identities=9% Similarity=-0.057 Sum_probs=30.7
Q ss_pred CCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 73 KGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 73 ~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
....+|+|+|-+....-+.++... .+.-+.++|+|||.+++-++..
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFE---------LLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHH---------HHHHHHHHBCTTCCEEEEEECT
T ss_pred CCCCeeEEEECCchhhCCcHHHHH---------HHHHHHHHcCCCcEEEEEeCCc
Confidence 346899999866554333222221 2445668999999999988765
No 408
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=40.45 E-value=31 Score=31.43 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=26.9
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHH--hcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLF--IVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~--~L~~gG~fV~KvF~g 127 (621)
...+|+|++|...... ... ....+..+.+ +|+|||.|++-....
T Consensus 111 ~~~fD~i~~~~p~~~~-~~~---------~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVD-SAD---------VDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SSCCSEEEECCCTTSC-HHH---------HHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCccEEEECCCCCcc-hhh---------HHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 4689999998553221 011 1112333445 999999999976544
No 409
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=40.41 E-value=17 Score=36.79 Aligned_cols=99 Identities=25% Similarity=0.315 Sum_probs=52.6
Q ss_pred CCCCCcceEEEecc-CCChhHHH-HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 312 LGPGELLYFADVCA-GPGGFSEY-VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 312 ~~~g~~~~vlDLca-aPGGwsqy-l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
+++|+ ++|-.|| |+=|.... ++.. ..+++++++..+. +++ +..-.|.+..-|..+.+..+.+
T Consensus 146 ~~~g~--~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~---~~~---------~~~~~ga~~~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 146 VKKGD--YVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDE---KLK---------IAKEYGAEYLINASKEDILRQV 209 (334)
T ss_dssp CCTTC--EEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHH---HHH---------HHHHTTCSEEEETTTSCHHHHH
T ss_pred CCCCC--EEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHH---HHH---------HHHHcCCcEEEeCCCchHHHHH
Confidence 46777 7877773 33333222 2222 3568999886431 110 1112343322344444444444
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
. +.+.+.++|+|+.= .|... +..++.+|++||.+|+=
T Consensus 210 ~----~~~~~~g~D~vid~-----~g~~~-------------~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 210 L----KFTNGKGVDASFDS-----VGKDT-------------FEISLAALKRKGVFVSF 246 (334)
T ss_dssp H----HHTTTSCEEEEEEC-----CGGGG-------------HHHHHHHEEEEEEEEEC
T ss_pred H----HHhCCCCceEEEEC-----CChHH-------------HHHHHHHhccCCEEEEE
Confidence 3 33556789998753 23221 22467789999999874
No 410
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=40.28 E-value=60 Score=31.70 Aligned_cols=80 Identities=14% Similarity=0.049 Sum_probs=45.1
Q ss_pred cc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEcc-
Q psy13508 49 VK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD- 126 (621)
Q Consensus 49 v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~- 126 (621)
++ .+||+++... .....+|+|++=++...- ...+ + ...+.-+.++|+|||.|++=.+.
T Consensus 135 i~~~~~D~~~l~~-----------~~~~~FD~V~~~~~l~~l--~~~~--~-----~~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 135 ISLYCCSIFDLPR-----------ANIGKFDRIWDRGALVAI--NPGD--H-----DRYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp EEEEESCTTTGGG-----------GCCCCEEEEEESSSTTTS--CGGG--H-----HHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred eEEEECccccCCc-----------ccCCCEEEEEEhhhhhhC--CHHH--H-----HHHHHHHHHHcCCCeEEEEEEEec
Confidence 44 5899987431 012579999976655432 2111 1 11234567899999999654332
Q ss_pred ------CC--CcChHHHHHHHHcccceeEE
Q psy13508 127 ------MF--TPFSAGLLYLLYRSYKQVCI 148 (621)
Q Consensus 127 ------g~--~~~~~~l~~~l~~~F~~v~~ 148 (621)
|. .-...++...+...|+.+..
T Consensus 195 ~~~~~~g~~~~~~~~el~~~l~~~f~v~~~ 224 (252)
T 2gb4_A 195 DPTKHAGPPFYVPSAELKRLFGTKCSMQCL 224 (252)
T ss_dssp CTTSCCCSSCCCCHHHHHHHHTTTEEEEEE
T ss_pred CCccCCCCCCCCCHHHHHHHhhCCeEEEEE
Confidence 10 01235666677666765443
No 411
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=40.23 E-value=17 Score=34.79 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=24.3
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
..++|+|++|+... ... ..+..+..+|+|||.+|+
T Consensus 127 ~~~fD~V~~d~~~~-----~~~---------~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 127 NDSYQLVFGQVSPM-----DLK---------ALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp TTCEEEEEECCCTT-----THH---------HHHHHHHHHEEEEEEEEE
T ss_pred CCCcCeEEEcCcHH-----HHH---------HHHHHHHHHcCCCcEEEE
Confidence 45799999997421 111 124556789999999997
No 412
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=40.11 E-value=27 Score=35.45 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=51.5
Q ss_pred CCCCCcceEEEeccCC-ChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHH
Q psy13508 312 LGPGELLYFADVCAGP-GGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLH 390 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaP-GGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~ 390 (621)
+++|+ +||-.|+|+ |.+.--+++.. .+++++++..+.. ++ +..-.|.+..-|-.+.+..+.+.
T Consensus 164 ~~~g~--~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~---~~---------~~~~lGa~~~i~~~~~~~~~~~~ 227 (340)
T 3s2e_A 164 TRPGQ--WVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAK---LN---------LARRLGAEVAVNARDTDPAAWLQ 227 (340)
T ss_dssp CCTTS--EEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHH---HH---------HHHHTTCSEEEETTTSCHHHHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHH---HH---------HHHHcCCCEEEeCCCcCHHHHHH
Confidence 36787 788788765 33333333333 4699999865321 10 11123432222333333334433
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+ +.+ ++|+|+-..+ ... .+..++..|++||.+|.=
T Consensus 228 ~-----~~g-~~d~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 228 K-----EIG-GAHGVLVTAV-----SPK------------AFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp H-----HHS-SEEEEEESSC-----CHH------------HHHHHHHHEEEEEEEEEC
T ss_pred H-----hCC-CCCEEEEeCC-----CHH------------HHHHHHHHhccCCEEEEe
Confidence 3 224 7898875532 111 122467889999999864
No 413
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=39.12 E-value=12 Score=35.42 Aligned_cols=34 Identities=15% Similarity=0.244 Sum_probs=24.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
.++|+|++|... .. ....+..+..+|+|||.+|+
T Consensus 144 ~~~D~v~~d~~~--------~~------~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 144 GTFDVAVVDADK--------EN------CSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp TCEEEEEECSCS--------TT------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEECCCH--------HH------HHHHHHHHHHHcCCCeEEEE
Confidence 579999998751 11 11234567789999999998
No 414
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=39.10 E-value=30 Score=37.70 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=24.1
Q ss_pred CCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecC
Q psy13508 315 GELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLT 350 (621)
Q Consensus 315 g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~ 350 (621)
...++|+||+||.||++.-+.. .+. -.+++++..
T Consensus 86 ~~~~~viDLFaG~GGlslG~~~-aG~-~~v~avE~d 119 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGFES-IGG-QCVFTSEWN 119 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHHHT-TTE-EEEEEECCC
T ss_pred CccceEEEecCCccHHHHHHHH-CCC-EEEEEEeCC
Confidence 3356999999999999986643 432 236777664
No 415
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=38.80 E-value=49 Score=33.68 Aligned_cols=64 Identities=6% Similarity=0.046 Sum_probs=37.6
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..+|+|+++..... |.....+ .....+.-+.++|+|||.+++=.-... .+.. .+.+.|..+...
T Consensus 260 ~~fD~Iv~~~~~~~-g~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~---~l~~~f~~~~~~ 323 (343)
T 2pjd_A 260 GRFDMIISNPPFHD-GMQTSLD-----AAQTLIRGAVRHLNSGGELRIVANAFL--PYPD---VLDETFGFHEVI 323 (343)
T ss_dssp SCEEEEEECCCCCS-SSHHHHH-----HHHHHHHHHGGGEEEEEEEEEEEETTS--SHHH---HHHHHHSCCEEE
T ss_pred CCeeEEEECCCccc-CccCCHH-----HHHHHHHHHHHhCCCCcEEEEEEcCCC--CcHH---HHHHhcCceEEE
Confidence 46899998765433 3221111 122335668899999999998665543 3333 445556655443
No 416
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=38.77 E-value=17 Score=36.73 Aligned_cols=101 Identities=24% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCCCCcceEEEeccCCChhHHH---HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEY---VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqy---l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ ++|-.|+ .||.-+. ++... .+++++++..+. +++ +..-.|.+..-|..+.+..+.
T Consensus 138 ~~~g~--~VlV~Ga-~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~---~~~---------~~~~~Ga~~~~~~~~~~~~~~ 200 (325)
T 3jyn_A 138 VKPGE--IILFHAA-AGGVGSLACQWAKAL--GAKLIGTVSSPE---KAA---------HAKALGAWETIDYSHEDVAKR 200 (325)
T ss_dssp CCTTC--EEEESST-TSHHHHHHHHHHHHH--TCEEEEEESSHH---HHH---------HHHHHTCSEEEETTTSCHHHH
T ss_pred CCCCC--EEEEEcC-CcHHHHHHHHHHHHC--CCEEEEEeCCHH---HHH---------HHHHcCCCEEEeCCCccHHHH
Confidence 46777 7777663 2333332 23333 468999886431 110 011234332334444444444
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEcc
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 451 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~ 451 (621)
+. +.+.+.++|+|+. +.|.... ..++..|++||.+|+=-..
T Consensus 201 ~~----~~~~~~g~Dvvid-----~~g~~~~-------------~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 201 VL----ELTDGKKCPVVYD-----GVGQDTW-------------LTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp HH----HHTTTCCEEEEEE-----SSCGGGH-------------HHHHTTEEEEEEEEECCCT
T ss_pred HH----HHhCCCCceEEEE-----CCChHHH-------------HHHHHHhcCCCEEEEEecC
Confidence 43 3456678999884 3333211 2367899999999875443
No 417
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=37.87 E-value=24 Score=32.48 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=22.1
Q ss_pred HHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEE
Q psy13508 107 FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCI 148 (621)
Q Consensus 107 l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~ 148 (621)
+..+.++|+|||.+++=.-.. ...++...+ +-|+.+..
T Consensus 148 l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~-~g~~~~~~ 185 (207)
T 1jsx_A 148 VSWCHHLPGEQGRFYALKGQM---PEDEIALLP-EEYQVESV 185 (207)
T ss_dssp HHHHTTSEEEEEEEEEEESSC---CHHHHHTSC-TTEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEeCCC---chHHHHHHh-cCCceeee
Confidence 455678999999998753222 233333333 35666553
No 418
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=37.21 E-value=52 Score=33.82 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=49.3
Q ss_pred CCCCCcceEEEeccCCChhHH-HHHHhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCC--hhhHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSE-YVLYRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD--PENIL 387 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsq-yl~~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~--~~~~~ 387 (621)
+++|+ +||-+|+||=|... -+++.. .+ ++++++..+.. + .+..-.|.+..-|..+ .+..+
T Consensus 193 ~~~g~--~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~---~---------~~a~~lGa~~vi~~~~~~~~~~~ 256 (376)
T 1e3i_A 193 VTPGS--TCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEK---F---------PKAKALGATDCLNPRELDKPVQD 256 (376)
T ss_dssp CCTTC--EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGG---H---------HHHHHTTCSEEECGGGCSSCHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHH---H---------HHHHHhCCcEEEccccccchHHH
Confidence 46787 78888864423222 122322 35 79998765321 1 0111234321112221 12233
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEE
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCK 448 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K 448 (621)
.+. +.+.+ ++|+|+ ++.|.... +..++..|++| |.+|+=
T Consensus 257 ~v~----~~~~~-g~Dvvi-----d~~G~~~~------------~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 257 VIT----ELTAG-GVDYSL-----DCAGTAQT------------LKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHH----HHHTS-CBSEEE-----ESSCCHHH------------HHHHHHTBCTTTCEEEEC
T ss_pred HHH----HHhCC-CccEEE-----ECCCCHHH------------HHHHHHHhhcCCCEEEEE
Confidence 333 33444 899987 34443211 22467899999 999863
No 419
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=36.93 E-value=17 Score=35.09 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=23.7
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
.++|+|++|+... . ....+..+..+|+|||.+|+
T Consensus 146 ~~fD~I~~d~~~~--------~------~~~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 146 GSYDFGFVDADKP--------N------YIKYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp TCEEEEEECSCGG--------G------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCEEEECCchH--------H------HHHHHHHHHHhcCCCeEEEE
Confidence 5799999996421 1 11234556789999999987
No 420
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=36.90 E-value=47 Score=35.98 Aligned_cols=52 Identities=15% Similarity=0.074 Sum_probs=31.7
Q ss_pred CcccEEEecCCCCCCCChh----------h-hHHHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 75 RGVHFMMADGGFSVEGQEN----------I-QEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~----------~-d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
..+|+|++|.--+-+|... . +......+....+.-|..+|+|||.+|.=...
T Consensus 186 ~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 186 EMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp TCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 4799999996544444321 1 11112223344456688999999999875543
No 421
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=36.68 E-value=31 Score=34.19 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=17.7
Q ss_pred HHHHHHhcCCCCEEEEeEccCC
Q psy13508 107 FLVSLFIVRPEGHFVCKVFDMF 128 (621)
Q Consensus 107 l~~A~~~L~~gG~fV~KvF~g~ 128 (621)
+.-+.++|+|||.+++-.+...
T Consensus 166 l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 166 FKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp HHHHHHSSCTTCEEEEEEEECC
T ss_pred HHHHHHhcCCCcEEEEEEEecc
Confidence 4557789999999999877653
No 422
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=36.64 E-value=36 Score=33.13 Aligned_cols=59 Identities=5% Similarity=-0.175 Sum_probs=39.4
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
.++|+|+++... +. ....+.-+.++|+|||.+++--+... ....+...+++. |+.+...
T Consensus 183 ~~fD~Vv~n~~~--------~~------~~~~l~~~~~~LkpgG~lils~~~~~--~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 183 GPFDLLVANLYA--------EL------HAALAPRYREALVPGGRALLTGILKD--RAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp CCEEEEEEECCH--------HH------HHHHHHHHHHHEEEEEEEEEEEEEGG--GHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEECCcH--------HH------HHHHHHHHHHHcCCCCEEEEEeeccC--CHHHHHHHHHHCCCEEEEEe
Confidence 478999986421 11 12234557789999999998755442 566777777766 8876654
No 423
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=36.62 E-value=18 Score=35.36 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=28.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
..+|+|++.++....- ...+. ....+.-+.++|+|||.+++-+...
T Consensus 132 ~~fD~v~~~~~l~~~~-~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 132 KEFDVISSQFSFHYAF-STSES------LDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SCEEEEEEESCGGGGG-SSHHH------HHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCcCEEEECchhhhhc-CCHHH------HHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4688888876543210 11111 2223455778999999999987654
No 424
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=36.62 E-value=25 Score=32.24 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=18.2
Q ss_pred HHHHHHHhcCCCCEEEEeEccC
Q psy13508 106 QFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 106 ~l~~A~~~L~~gG~fV~KvF~g 127 (621)
.+.-+.++|+|||.+++-.+..
T Consensus 141 ~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 141 VLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHhCcCCCEEEEEeCCC
Confidence 4455778999999999988866
No 425
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=36.14 E-value=56 Score=34.19 Aligned_cols=64 Identities=16% Similarity=0.140 Sum_probs=41.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..+|+|+++......+....+. ....+.-+.++|+|||.+++-.-... . +...+.+.|..+...
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~~~------~~~~l~~~~~~LkpGG~l~iv~n~~l--~---~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVILDV------AQAFVNVAAARLRPGGVFFLVSNPFL--K---YEPLLEEKFGAFQTL 360 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCCHH------HHHHHHHHHHHEEEEEEEEEEECTTS--C---HHHHHHHHHSCCEEE
T ss_pred CCeEEEEECCchhhcccccHHH------HHHHHHHHHHhcCcCcEEEEEEcCCC--C---hHHHHHHhhccEEEE
Confidence 5799999987666544333222 12234667889999999998765442 3 334566667777665
No 426
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=36.06 E-value=14 Score=35.17 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=24.9
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|.... . ....+..+..+|+|||.+|+=
T Consensus 125 ~~fD~I~~~~~~~-----~---------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAKG-----Q---------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGGS-----C---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCHH-----H---------HHHHHHHHHHHcCCCeEEEEE
Confidence 4799999987642 1 112345577899999999985
No 427
>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B*
Probab=35.90 E-value=33 Score=35.40 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=38.4
Q ss_pred cceeEEEeccCCCeeE-cccceeeeCCCcEEEEEeeeeeeccCcceeeeeeeeeeeeeeecCcccCC
Q psy13508 556 KHAIYRYREDSNRWVS-ETSLGIQLSPGTLVYGETVEEFKGQGASQVKLKTFHIIDAYLITGRSQVK 621 (621)
Q Consensus 556 ~~~~~~~~~~~~~~~~-~~~~~~~lp~~t~~~~e~~~e~~~~g~~~~~~~~~hiiDa~~l~~~d~~~ 621 (621)
+..+|-|+..+..|.. .+++.-.++++|+|=||+|-.- ..|+ ..+.+-|.+.++|+|++.
T Consensus 98 ~g~v~L~sR~~~~~t~~fp~~~~~~~~~~vLDGElv~~~-~~~~-----~~f~vFDlL~~~G~dl~~ 158 (330)
T 1ckm_A 98 FKVCTIIDRAMTVYLLPFKNIPRVLFQGSIFDGELCVDI-VEKK-----FAFVLFDAVVVSGVTVSQ 158 (330)
T ss_dssp EEEEEEECTTCCEEECCCSCCCTTGGGCEEEEEEEEEET-TTTE-----EEEEEEEEEEETTEECTT
T ss_pred CCEEEEEeCCCCEEeccChhhhhccCCCeeEEEEEEEEc-CCCe-----EEEEEEeeeeeCCccccc
Confidence 3456666544444432 1222124567999999999742 2232 568999999999999863
No 428
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=35.67 E-value=45 Score=34.26 Aligned_cols=99 Identities=20% Similarity=0.168 Sum_probs=49.1
Q ss_pred CCCCCcceEEEeccCCChhHH-HHHHhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCC--hhhHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSE-YVLYRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYD--PENIL 387 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsq-yl~~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~--~~~~~ 387 (621)
+++|+ +||-+|+||=|-.. .+++.. .+ ++++++..+.. + .+..-.|.+..-|..+ .+..+
T Consensus 189 ~~~g~--~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~---~---------~~a~~lGa~~vi~~~~~~~~~~~ 252 (373)
T 1p0f_A 189 VTPGS--TCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDK---F---------PKAIELGATECLNPKDYDKPIYE 252 (373)
T ss_dssp CCTTC--EEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGG---H---------HHHHHTTCSEEECGGGCSSCHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHH---H---------HHHHHcCCcEEEecccccchHHH
Confidence 46787 78888864422222 122223 34 78898765321 1 0111234421112211 12223
Q ss_pred HHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEE
Q psy13508 388 SLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCK 448 (621)
Q Consensus 388 ~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K 448 (621)
. +.+.+.+ ++|+|+ ++.|.... +..++..|++| |.+|+=
T Consensus 253 ~----i~~~t~g-g~Dvvi-----d~~g~~~~------------~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 253 V----ICEKTNG-GVDYAV-----ECAGRIET------------MMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp H----HHHHTTS-CBSEEE-----ECSCCHHH------------HHHHHHTBCTTTCEEEEC
T ss_pred H----HHHHhCC-CCCEEE-----ECCCCHHH------------HHHHHHHHhcCCCEEEEE
Confidence 3 3333444 899987 34443211 23467899999 999863
No 429
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=35.41 E-value=31 Score=34.13 Aligned_cols=54 Identities=6% Similarity=-0.196 Sum_probs=33.9
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC----CcChHHHHHHHHcc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF----TPFSAGLLYLLYRS 142 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~----~~~~~~l~~~l~~~ 142 (621)
...+|+|++|..+.. .+ .+..+.++|+|||.+++-.+... ......+...+.+.
T Consensus 190 ~~~fD~Vi~~~p~~~------~~---------~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 190 ENIADRILMGYVVRT------HE---------FIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp CSCEEEEEECCCSSG------GG---------GHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred cCCccEEEECCchhH------HH---------HHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 357899999754322 11 23457789999999999877631 12445555555544
No 430
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=35.09 E-value=58 Score=33.39 Aligned_cols=15 Identities=20% Similarity=-0.095 Sum_probs=12.3
Q ss_pred hhhhccCCC-cEEEEE
Q psy13508 434 VSLFIVRPE-GHFVCK 448 (621)
Q Consensus 434 ~al~~Lr~G-G~fV~K 448 (621)
.++..|++| |.+|+=
T Consensus 278 ~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 278 NALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTBCTTTCEEEEC
T ss_pred HHHHHhhcCCcEEEEE
Confidence 467899999 999863
No 431
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=34.53 E-value=28 Score=35.41 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=52.5
Q ss_pred CCCCCcceEEEeccCCChhHHH---HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEY---VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqy---l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ ++|-.|+| +--++ +++.. ..++++++|..+.. + .+..-.|.+..=|-.+ +..+.
T Consensus 169 ~~~g~--~vlv~GaG--~vG~~a~qla~~~-g~~~Vi~~~~~~~~---~---------~~~~~lGa~~~i~~~~-~~~~~ 230 (345)
T 3jv7_A 169 LGPGS--TAVVIGVG--GLGHVGIQILRAV-SAARVIAVDLDDDR---L---------ALAREVGADAAVKSGA-GAADA 230 (345)
T ss_dssp CCTTC--EEEEECCS--HHHHHHHHHHHHH-CCCEEEEEESCHHH---H---------HHHHHTTCSEEEECST-THHHH
T ss_pred CCCCC--EEEEECCC--HHHHHHHHHHHHc-CCCEEEEEcCCHHH---H---------HHHHHcCCCEEEcCCC-cHHHH
Confidence 36777 78888874 44333 23333 25789999865321 1 0111234321112111 23333
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+.+.+.+.++|+|+- +.|.+. .+..++..|++||.+|+=-
T Consensus 231 ----v~~~t~g~g~d~v~d-----~~G~~~------------~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 231 ----IRELTGGQGATAVFD-----FVGAQS------------TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp ----HHHHHGGGCEEEEEE-----SSCCHH------------HHHHHHHHEEEEEEEEECS
T ss_pred ----HHHHhCCCCCeEEEE-----CCCCHH------------HHHHHHHHHhcCCEEEEEC
Confidence 334455678998874 334331 1224678899999998643
No 432
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=34.45 E-value=34 Score=33.40 Aligned_cols=44 Identities=16% Similarity=0.252 Sum_probs=27.0
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
..+|+|+|-+....-+..+.. ..+.-+.++|+|||.+++-.+..
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYD---------AFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHH---------HHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CCeeEEEEeCchhhcChHHHH---------HHHHHHHHhcCCCCEEEEEEecC
Confidence 356777765544333222211 12455678999999999988765
No 433
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=34.37 E-value=20 Score=37.22 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=20.6
Q ss_pred CCCCcceEEEeccCCChh-HHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGF-SEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGw-sqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|+ +||-+|+||=|. .-.+++. ..+++++++..+
T Consensus 193 ~~g~--~VlV~GaG~vG~~aiqlak~--~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 193 GPGK--KVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSE 228 (369)
T ss_dssp CTTC--EEEEECCSHHHHHHHHHHHH--TTCEEEEEESSG
T ss_pred CCCC--EEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 6777 788888754222 2222333 246799988653
No 434
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=33.61 E-value=25 Score=33.50 Aligned_cols=43 Identities=9% Similarity=0.045 Sum_probs=25.2
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
...+|+|++|.-.. ....... ......+.-+.++|||||.|++
T Consensus 126 ~~~fD~V~~d~~~~--~~~~~~~----~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 126 DGHFDGILYDTYPL--SEETWHT----HQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TTCEEEEEECCCCC--BGGGTTT----HHHHHHHHTHHHHEEEEEEEEE
T ss_pred CCceEEEEECCccc--chhhhhh----hhHHHHHHHHHHhcCCCeEEEE
Confidence 45799999983322 1112111 1112234557789999999985
No 435
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=33.42 E-value=33 Score=31.83 Aligned_cols=43 Identities=7% Similarity=-0.023 Sum_probs=26.7
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
..+|+|++......- .+.. ....+.-+.++|+|||.+++-.+.
T Consensus 105 ~~fD~v~~~~~l~~~----~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHL----TDDE-----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SCCSEEEEESCGGGS----CHHH-----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CCeEEEEECcchhcC----ChHH-----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 578888887544322 1110 122345567899999999998643
No 436
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=33.34 E-value=74 Score=28.03 Aligned_cols=66 Identities=12% Similarity=0.146 Sum_probs=41.6
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCc----------ChHHHHHHHHccc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP----------FSAGLLYLLYRSY 143 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~----------~~~~l~~~l~~~F 143 (621)
...+|+|++....... .+.+ ..+.-+.++|+|||.+++-.|..... ...++...+. -|
T Consensus 73 ~~~~D~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf 140 (170)
T 3i9f_A 73 DNSVDFILFANSFHDM--DDKQ---------HVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NF 140 (170)
T ss_dssp TTCEEEEEEESCSTTC--SCHH---------HHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TE
T ss_pred CCceEEEEEccchhcc--cCHH---------HHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-Cc
Confidence 4579999976654432 1111 23455678999999999987654211 1346666777 88
Q ss_pred ceeEEecC
Q psy13508 144 KQVCIFKP 151 (621)
Q Consensus 144 ~~v~~~KP 151 (621)
+.+..+..
T Consensus 141 ~~~~~~~~ 148 (170)
T 3i9f_A 141 VVEKRFNP 148 (170)
T ss_dssp EEEEEECS
T ss_pred EEEEccCC
Confidence 88777644
No 437
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=33.00 E-value=52 Score=33.59 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=29.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 125 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF 125 (621)
..+|+|++|.-. |.+..+......++..-+..+.++|+|||.+++=..
T Consensus 271 ~~~D~Ii~npPy---g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPH---GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCS---CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCC---cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 357999999754 333222222234555556778899999999998543
No 438
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=32.96 E-value=41 Score=33.49 Aligned_cols=44 Identities=18% Similarity=0.213 Sum_probs=27.7
Q ss_pred cccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCC
Q psy13508 76 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMF 128 (621)
Q Consensus 76 ~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~ 128 (621)
.+|+|++.+....-+..+.. ..+.-+.++|+|||.+++-.+...
T Consensus 155 ~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 155 PVDRIVSIEAFEHFGHENYD---------DFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp CCSEEEEESCGGGTCGGGHH---------HHHHHHHHHSCTTCEEEEEEEECC
T ss_pred CcCEEEEeChHHhcCHHHHH---------HHHHHHHHhcCCCcEEEEEEeccC
Confidence 56777766544333322211 134556789999999999888763
No 439
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=32.56 E-value=31 Score=34.96 Aligned_cols=33 Identities=6% Similarity=-0.160 Sum_probs=24.4
Q ss_pred cceEEEeccCCChhHHHHHHhcCCCCe-EEEEecC
Q psy13508 317 LLYFADVCAGPGGFSEYVLYRKKWRAK-GIGFTLT 350 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~r~~~~~k-~~GvdL~ 350 (621)
.++|+||+||.||++.-+.+ .+.... ++++++.
T Consensus 16 ~~~vidLFaG~GG~~~g~~~-aG~~~~~v~a~E~d 49 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKD-LGIQVDRYIASEVC 49 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHH-TTBCEEEEEEECCC
T ss_pred CCEEEEeCcCccHHHHHHHH-CCCccceEEEEECC
Confidence 45899999999999986554 554444 6788764
No 440
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=32.55 E-value=23 Score=31.22 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=27.0
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
.++|+|++|.... + ...+.. ..+.- .++|+|||.+++-....
T Consensus 109 ~~~D~i~~~~~~~--~--~~~~~~------~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 109 ERFTVAFMAPPYA--M--DLAALF------GELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCEEEEEECCCTT--S--CTTHHH------HHHHH-HTCEEEEEEEEEEEETT
T ss_pred CceEEEEECCCCc--h--hHHHHH------HHHHh-hcccCCCcEEEEEeCCc
Confidence 4799999997654 1 222211 11111 58999999999977765
No 441
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=32.09 E-value=33 Score=34.95 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCCCCcceEEEeccCCChhHHHHHH--hcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLY--RKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~--r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
+++|+ +||=.|++ |+.-+.+.+ +.....++++++ .+. +.+ . .. .|.+..=| .+....+.+
T Consensus 140 ~~~g~--~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~---~~~--------~-~~-~ga~~~~~-~~~~~~~~~ 201 (349)
T 4a27_A 140 LREGM--SVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STF---KHE--------A-IK-DSVTHLFD-RNADYVQEV 201 (349)
T ss_dssp CCTTC--EEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGG---GHH--------H-HG-GGSSEEEE-TTSCHHHHH
T ss_pred CCCCC--EEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHH---HHH--------H-HH-cCCcEEEc-CCccHHHHH
Confidence 46787 78888873 444343322 222246888876 211 111 0 11 34322223 333333443
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
.+ .+ +.++|+|+- +.|.+.. ..++.+|++||.+|+=-
T Consensus 202 ~~----~~-~~g~Dvv~d-----~~g~~~~-------------~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 202 KR----IS-AEGVDIVLD-----CLCGDNT-------------GKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HH----HC-TTCEEEEEE-----ECC--------------------CTTEEEEEEEEEEC
T ss_pred HH----hc-CCCceEEEE-----CCCchhH-------------HHHHHHhhcCCEEEEEC
Confidence 33 23 568998884 2232221 13689999999998643
No 442
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=31.91 E-value=66 Score=32.99 Aligned_cols=15 Identities=20% Similarity=0.104 Sum_probs=12.1
Q ss_pred hhhhccCCC-cEEEEE
Q psy13508 434 VSLFIVRPE-GHFVCK 448 (621)
Q Consensus 434 ~al~~Lr~G-G~fV~K 448 (621)
.++..|++| |.+|+=
T Consensus 277 ~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 277 TALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHHHBCTTTCEEEEC
T ss_pred HHHHHhhcCCcEEEEe
Confidence 467889999 998863
No 443
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=31.85 E-value=79 Score=29.08 Aligned_cols=66 Identities=9% Similarity=-0.047 Sum_probs=41.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCC----------cChHHHHHHHHcc-
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFT----------PFSAGLLYLLYRS- 142 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~----------~~~~~l~~~l~~~- 142 (621)
...+|+|++......- .+. ...+.-+.++|+|||.+++=.+.... ....++...+.+.
T Consensus 104 ~~~fD~v~~~~~l~~~--~~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHEL--SEP---------LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp SSCEEEEEEESCGGGC--SSH---------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT
T ss_pred CCCeeEEEeehhhhhc--CCH---------HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCC
Confidence 3468888876544322 111 12345567899999999997655321 0236777777765
Q ss_pred cceeEEec
Q psy13508 143 YKQVCIFK 150 (621)
Q Consensus 143 F~~v~~~K 150 (621)
|+.+..+.
T Consensus 173 f~~~~~~~ 180 (219)
T 3dh0_A 173 IRVGRVVE 180 (219)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 88877654
No 444
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=31.77 E-value=20 Score=34.37 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=24.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|+.. .+. ...+..+..+|+|||.+|+-
T Consensus 147 ~~fD~V~~d~~~-----~~~---------~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 147 PEFDLIFIDADK-----RNY---------PRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp CCEEEEEECSCG-----GGH---------HHHHHHHHHTEEEEEEEEEE
T ss_pred CCcCEEEECCCH-----HHH---------HHHHHHHHHHcCCCeEEEEe
Confidence 579999999751 111 11345567999999999984
No 445
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=31.73 E-value=61 Score=33.36 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=50.8
Q ss_pred CCCCCcceEEEeccCCChhHHHH---HHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCC--ChhhH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYV---LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVY--DPENI 386 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~--~~~~~ 386 (621)
+++|+ +||=+|+ |+--..+ ++..+ ..++++++..+.. ++ +..-.|.+..=|.. +....
T Consensus 191 ~~~g~--~VlV~Ga--G~vG~~a~q~a~~~G-a~~Vi~~~~~~~~---~~---------~a~~lGa~~vi~~~~~~~~~~ 253 (378)
T 3uko_A 191 VEPGS--NVAIFGL--GTVGLAVAEGAKTAG-ASRIIGIDIDSKK---YE---------TAKKFGVNEFVNPKDHDKPIQ 253 (378)
T ss_dssp CCTTC--CEEEECC--SHHHHHHHHHHHHHT-CSCEEEECSCTTH---HH---------HHHTTTCCEEECGGGCSSCHH
T ss_pred CCCCC--EEEEECC--CHHHHHHHHHHHHcC-CCeEEEEcCCHHH---HH---------HHHHcCCcEEEccccCchhHH
Confidence 46777 6777886 4443332 33332 2379999866421 11 11123432111221 12223
Q ss_pred HHHHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCC-cEEEEEEc
Q psy13508 387 LSLHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPE-GHFVCKVF 450 (621)
Q Consensus 387 ~~l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~G-G~fV~K~F 450 (621)
+. +.+.+.+ ++|+|+- +.|... .+..++..|++| |.+|+=-.
T Consensus 254 ~~----i~~~~~g-g~D~vid-----~~g~~~------------~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 254 EV----IVDLTDG-GVDYSFE-----CIGNVS------------VMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HH----HHHHTTS-CBSEEEE-----CSCCHH------------HHHHHHHTBCTTTCEEEECSC
T ss_pred HH----HHHhcCC-CCCEEEE-----CCCCHH------------HHHHHHHHhhccCCEEEEEcc
Confidence 33 3334545 8999873 344321 122468899997 99887543
No 446
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=31.22 E-value=38 Score=33.22 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=27.6
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|+ .|||.+||.|.....+.. . ..+++|+++.+
T Consensus 211 ~~~~--~vlD~f~GsGtt~~~a~~-~--gr~~ig~e~~~ 244 (260)
T 1g60_A 211 NPND--LVLDCFMGSGTTAIVAKK-L--GRNFIGCDMNA 244 (260)
T ss_dssp CTTC--EEEESSCTTCHHHHHHHH-T--TCEEEEEESCH
T ss_pred CCCC--EEEECCCCCCHHHHHHHH-c--CCeEEEEeCCH
Confidence 4566 899999999999998775 3 46899998863
No 447
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=31.14 E-value=3e+02 Score=25.60 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=62.8
Q ss_pred EEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhcCC
Q psy13508 320 FADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKSTKG 399 (621)
Q Consensus 320 vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~~~ 399 (621)
|+|||-|-|===--+.+. -+.-.++.+|-.-.+. ..-.|..+-.+.|||.+ +.......+ +
T Consensus 44 VlElGLGNGRTydHLRe~-~P~R~I~vfDR~~~~h-----------p~~~P~~e~~ilGdi~~--tL~~~~~r~-----g 104 (174)
T 3iht_A 44 VYELGLGNGRTYHHLRQH-VQGREIYVFERAVASH-----------PDSTPPEAQLILGDIRE--TLPATLERF-----G 104 (174)
T ss_dssp EEEECCTTCHHHHHHHHH-CCSSCEEEEESSCCCC-----------GGGCCCGGGEEESCHHH--HHHHHHHHH-----C
T ss_pred eEEecCCCChhHHHHHHh-CCCCcEEEEEeeeccC-----------CCCCCchHheecccHHH--HHHHHHHhc-----C
Confidence 999999999655555554 3677899998652211 01112222357888874 444333332 7
Q ss_pred CcccEEEecCCCCCCCchhhHHHHHHHHHHHHHH--hhhhccCCCcEEEEEE
Q psy13508 400 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFL--VSLFIVRPEGHFVCKV 449 (621)
Q Consensus 400 ~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~--~al~~Lr~GG~fV~K~ 449 (621)
.++-|+=+|.|. |++..|-. .+..+ ..-.+|.|||..|.-.
T Consensus 105 ~~a~LaHaD~G~---g~~~~d~a------~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 105 ATASLVHADLGG---HNREKNDR------FARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp SCEEEEEECCCC---SCHHHHHH------HHHHHHHHHGGGEEEEEEEEESS
T ss_pred CceEEEEeecCC---CCcchhHH------HHHhhhHHHHHHhcCCcEEEeCC
Confidence 789999999876 44554432 22222 4567899999988643
No 448
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=30.83 E-value=26 Score=33.53 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=22.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
..+|+|+|++- .+. ...+..+..+|+|||.|++
T Consensus 140 ~~fD~V~~~~~------~~~---------~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 140 ESYDIVTARAV------ARL---------SVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp TCEEEEEEECC------SCH---------HHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEEecc------CCH---------HHHHHHHHHhcCCCCEEEE
Confidence 46899998762 111 1234567789999999986
No 449
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=30.73 E-value=31 Score=30.96 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=25.1
Q ss_pred CCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 399 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 399 ~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
...+|+|+|=....... ++.+. .+.-+.++|||||.|++.
T Consensus 61 ~~~fD~V~~~~~l~~~~-~~~~~---------~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT-LHSAE---------ILAEIARILRPGGCLFLK 100 (176)
T ss_dssp SSCEEEEEECCSTTCCC-CCCHH---------HHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEECChhhhcc-cCHHH---------HHHHHHHHCCCCEEEEEE
Confidence 56799999855443320 11111 223467889999999993
No 450
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=30.63 E-value=35 Score=35.12 Aligned_cols=147 Identities=12% Similarity=0.108 Sum_probs=69.3
Q ss_pred ceEEEeccCCChhHHHHHHhcCCC-CeEEEEecCCCCCCCCCcccCCCCCCccccC-CC-cccccCCChhhHHHHHHHHH
Q psy13508 318 LYFADVCAGPGGFSEYVLYRKKWR-AKGIGFTLTGSHDFKLDDFFAGPSETFEPYY-GV-KGNGDVYDPENILSLHEFVM 394 (621)
Q Consensus 318 ~~vlDLcaaPGGwsqyl~~r~~~~-~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~-Gv-~~~GDI~~~~~~~~l~~~v~ 394 (621)
++|+||+||.||++.-+... +.. ..++++|..+.. . +.....+ .. ...|||++... +.+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a---~--------~~~~~N~~~~~~~~~Di~~~~~-~~~~~--- 66 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVA---N--------EVYKYNFPHTQLLAKTIEGITL-EEFDR--- 66 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHH---H--------HHHHHHCTTSCEECSCGGGCCH-HHHHH---
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHH---H--------HHHHHhccccccccCCHHHccH-hHcCc---
Confidence 47999999999999977653 322 357888765310 0 0000111 11 34688886432 12211
Q ss_pred hhcCCCcccEEEecCCCCCCCchh-------hHHHHHHHHHHHHHHhhhhccC--CCcEEE--EEEccCCCCChHHHHHH
Q psy13508 395 KSTKGRGVHFMMADGGFSVEGQEN-------IQEILSKRLYLCQFLVSLFIVR--PEGHFV--CKVFDMFTPFSAGLLYL 463 (621)
Q Consensus 395 ~~~~~~~vDlVlsDg~~~~~G~~~-------~de~~~~~L~l~~l~~al~~Lr--~GG~fV--~K~F~~~~~~s~~ll~~ 463 (621)
..+|+|+++ |+|++... .|+. ..|. .+++-.+..++ |---++ ++-+... ..-..++..
T Consensus 67 -----~~~D~l~~g--pPCq~fS~ag~~~g~~d~r--~~l~-~~~~~~i~~~~~~P~~~~~ENV~~l~~~-~~~~~i~~~ 135 (343)
T 1g55_A 67 -----LSFDMILMS--PPCQPFTRIGRQGDMTDSR--TNSF-LHILDILPRLQKLPKYILLENVKGFEVS-STRDLLIQT 135 (343)
T ss_dssp -----HCCSEEEEC--CC--------------------CHH-HHHHHHGGGCSSCCSEEEEEEETTGGGS-HHHHHHHHH
T ss_pred -----CCcCEEEEc--CCCcchhhcCCcCCccCcc--chHH-HHHHHHHHHhcCCCCEEEEeCCccccCH-HHHHHHHHH
Confidence 258999986 55554321 1211 1222 23333445566 654444 4544321 112344555
Q ss_pred HHhcccee--EeecCCCC-CCCCceEEE-EEe
Q psy13508 464 LYRSYKQV--CIFKPNTS-RPANSERYI-VCK 491 (621)
Q Consensus 464 l~~~F~~V--~i~KP~aS-R~~ssE~Yl-Vc~ 491 (621)
|..+=..| .++.+.-- =|.+.|+++ ||.
T Consensus 136 l~~~GY~v~~~vl~a~~~GvPQ~R~R~~iv~~ 167 (343)
T 1g55_A 136 IENCGFQYQEFLLSPTSLGIPNSRLRYFLIAK 167 (343)
T ss_dssp HHHTTEEEEEEEECGGGGTCSCCCCEEEEEEE
T ss_pred HHHCCCeeEEEEEEHHHCCCCCcccEEEEEEE
Confidence 55431222 33444332 566777654 554
No 451
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=30.36 E-value=35 Score=35.17 Aligned_cols=33 Identities=9% Similarity=0.008 Sum_probs=24.0
Q ss_pred cceEEEeccCCChhHHHHHHhcCCC-CeEEEEecC
Q psy13508 317 LLYFADVCAGPGGFSEYVLYRKKWR-AKGIGFTLT 350 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~r~~~~-~k~~GvdL~ 350 (621)
.++|+||+||-||++.-+.+ .+.. -.++++|..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~-aG~~~~~v~a~e~d 36 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKE-SGLDGEIVAAVDIN 36 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHH-HTCSEEEEEEECCC
T ss_pred CCEEEEECcCccHHHHHHHH-cCCCceEEEEEeCC
Confidence 45899999999999986654 4432 346788764
No 452
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=30.23 E-value=73 Score=33.16 Aligned_cols=65 Identities=6% Similarity=0.003 Sum_probs=36.6
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIF 149 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~ 149 (621)
..++|+|++|...... ....++ +...-+.-+.++|+|||.+++=..... .+ ...+.+.|..+...
T Consensus 290 ~~~fD~Ii~nppfh~~-~~~~~~-----~~~~~l~~~~~~LkpgG~l~iv~n~~~--~~---~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQ-HALTDN-----VAWEMFHHARRCLKINGELYIVANRHL--DY---FHKLKKIFGNCTTI 354 (375)
T ss_dssp TTCEEEEEECCCC--------CC-----HHHHHHHHHHHHEEEEEEEEEEEETTS--CH---HHHHHHHHSCCEEE
T ss_pred CCCeeEEEECCCcccC-cccCHH-----HHHHHHHHHHHhCCCCcEEEEEEECCc--CH---HHHHHHhcCCEEEE
Confidence 3479999998665432 111122 112235668889999999999443332 33 34566667765554
No 453
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=30.20 E-value=29 Score=34.02 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=37.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHc-ccceeEEecC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR-SYKQVCIFKP 151 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~-~F~~v~~~KP 151 (621)
..+|+|++|+. + .. ..+..+.++|+|||.+++-..... ....+...+++ -|..+..++-
T Consensus 180 ~~~D~V~~~~~-~------~~---------~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 180 KDVDALFLDVP-D------PW---------NYIDKCWEALKGGGRFATVCPTTN--QVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp CSEEEEEECCS-C------GG---------GTHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHSSEEEEEEECC
T ss_pred CccCEEEECCc-C------HH---------HHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceeEEEEE
Confidence 46899999752 1 11 123456789999999998765431 33455566654 3877776643
No 454
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.15 E-value=53 Score=33.39 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=27.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCC
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~ 351 (621)
++|+ .|||-.||.|.-...+.. . ..+.+|+++.+
T Consensus 251 ~~~~--~VlDpF~GsGtt~~aa~~-~--gr~~ig~e~~~ 284 (323)
T 1boo_A 251 EPDD--LVVDIFGGSNTTGLVAER-E--SRKWISFEMKP 284 (323)
T ss_dssp CTTC--EEEETTCTTCHHHHHHHH-T--TCEEEEEESCH
T ss_pred CCCC--EEEECCCCCCHHHHHHHH-c--CCCEEEEeCCH
Confidence 5677 799999999997776654 3 46899999874
No 455
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=30.14 E-value=41 Score=35.35 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=17.0
Q ss_pred CCCCcceEEEeccCCChhHHHHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYVLY 336 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl~~ 336 (621)
+++. .++|.|||.|++.--+..
T Consensus 193 ~~~~--~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 193 FPDK--PFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp CTTS--CEEETTCTTSHHHHHHHH
T ss_pred CCCC--eEEEeCCcCCHHHHHHHH
Confidence 3454 799999999999875554
No 456
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=29.62 E-value=59 Score=33.29 Aligned_cols=15 Identities=20% Similarity=0.073 Sum_probs=12.3
Q ss_pred hhhhccCCC-cEEEEE
Q psy13508 434 VSLFIVRPE-GHFVCK 448 (621)
Q Consensus 434 ~al~~Lr~G-G~fV~K 448 (621)
.++..|++| |.+|+=
T Consensus 276 ~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 276 AALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHTBCTTTCEEEEC
T ss_pred HHHHhhccCCcEEEEE
Confidence 467899999 999864
No 457
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=29.26 E-value=41 Score=34.89 Aligned_cols=35 Identities=29% Similarity=0.169 Sum_probs=20.2
Q ss_pred CCCCCcceEEEeccCC-ChhHHHHHHhcCCCC-eEEEEecC
Q psy13508 312 LGPGELLYFADVCAGP-GGFSEYVLYRKKWRA-KGIGFTLT 350 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaP-GGwsqyl~~r~~~~~-k~~GvdL~ 350 (621)
+++|+ +||-.|+|| |-+.-.+++.. .+ +++++|..
T Consensus 183 ~~~g~--~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~ 219 (398)
T 1kol_A 183 VGPGS--TVYVAGAGPVGLAAAASARLL--GAAVVIVGDLN 219 (398)
T ss_dssp CCTTC--EEEEECCSHHHHHHHHHHHHT--TCSEEEEEESC
T ss_pred CCCCC--EEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCC
Confidence 36787 788888644 22222233333 34 78998865
No 458
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=29.08 E-value=65 Score=30.43 Aligned_cols=44 Identities=16% Similarity=-0.047 Sum_probs=26.9
Q ss_pred HHHHHHhcCCCCEEEEeEccCCC-------------cChHHHHHHHHcc-cceeEEec
Q psy13508 107 FLVSLFIVRPEGHFVCKVFDMFT-------------PFSAGLLYLLYRS-YKQVCIFK 150 (621)
Q Consensus 107 l~~A~~~L~~gG~fV~KvF~g~~-------------~~~~~l~~~l~~~-F~~v~~~K 150 (621)
+.-+.++|+|||.+++-...... ....++...+.+. |+.+....
T Consensus 180 l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 180 FKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp HHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 45567899999999998742110 0124555566544 77666553
No 459
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.08 E-value=1.7e+02 Score=27.55 Aligned_cols=37 Identities=14% Similarity=-0.147 Sum_probs=27.1
Q ss_pred ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCC
Q psy13508 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFS 87 (621)
Q Consensus 51 ~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn 87 (621)
.++|+++++.++.+.+.+.+.++.+++|+|++=.+..
T Consensus 51 ~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 51 VKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGW 87 (241)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEccccc
Confidence 6899999988877766665544325799999877643
No 460
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=28.75 E-value=85 Score=29.15 Aligned_cols=43 Identities=9% Similarity=0.147 Sum_probs=28.1
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
...+|+|++....... .+. ...+.-+.++|+|||.+++-.+..
T Consensus 100 ~~~fD~v~~~~~l~~~--~~~---------~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 100 DESFDFALMVTTICFV--DDP---------ERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp TTCEEEEEEESCGGGS--SCH---------HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCCeeEEEEcchHhhc--cCH---------HHHHHHHHHHcCCCcEEEEEEeCC
Confidence 3478999987643322 111 123455678999999999987765
No 461
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=28.65 E-value=1.5e+02 Score=26.47 Aligned_cols=79 Identities=11% Similarity=0.003 Sum_probs=46.2
Q ss_pred cccc-ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCCCCh-------hhhHHHHHHHHHHHHHHHHHhcCCCC
Q psy13508 47 QCVK-GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVEGQE-------NIQEILSKRLYLCQFLVSLFIVRPEG 118 (621)
Q Consensus 47 ~~v~-~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~sG~~-------~~d~~~~~~L~l~~l~~A~~~L~~gG 118 (621)
..++ .+||+.++. ....+|+|+|+......... ...+ .+.-..+.| |||
T Consensus 61 ~~~~~~~~d~~~~~-------------~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l-pgG 117 (170)
T 3q87_B 61 RGGNLVRADLLCSI-------------NQESVDVVVFNPPYVPDTDDPIIGGGYLGRE---------VIDRFVDAV-TVG 117 (170)
T ss_dssp SSSCEEECSTTTTB-------------CGGGCSEEEECCCCBTTCCCTTTBCCGGGCH---------HHHHHHHHC-CSS
T ss_pred cCCeEEECChhhhc-------------ccCCCCEEEECCCCccCCccccccCCcchHH---------HHHHHHhhC-CCC
Confidence 3444 688887632 22579999997554422211 1111 122233344 999
Q ss_pred EEEEeEccCCCcChHHHHHHHHcc-cceeEEec
Q psy13508 119 HFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFK 150 (621)
Q Consensus 119 ~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~K 150 (621)
.+++=..... ...++...+++. |+.+...+
T Consensus 118 ~l~~~~~~~~--~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 118 MLYLLVIEAN--RPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp EEEEEEEGGG--CHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEEecCC--CHHHHHHHHHHCCCcEEEEEe
Confidence 9988665542 566777777664 88777664
No 462
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=28.64 E-value=75 Score=29.36 Aligned_cols=45 Identities=9% Similarity=0.087 Sum_probs=26.3
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEcc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFD 126 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~ 126 (621)
...+|+|++......- .+.+. ....+.-+.++|+|||.+++-.+.
T Consensus 99 ~~~~D~v~~~~~l~~~--~~~~~------~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSV--PDPKE------RSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp TTCEEEEEEESCGGGC--CCHHH------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCceeEEEEcchhhcC--CCHHH------HHHHHHHHHHHcCCCeEEEEEECC
Confidence 3467888875432211 11111 112345577899999999997653
No 463
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.44 E-value=1.7e+02 Score=28.24 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=41.9
Q ss_pred cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCCCC----chhhHHHH----HHHHHHHHHHhhhhccCCCcEEE
Q psy13508 375 KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSVEG----QENIQEIL----SKRLYLCQFLVSLFIVRPEGHFV 446 (621)
Q Consensus 375 ~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~~G----~~~~de~~----~~~L~l~~l~~al~~Lr~GG~fV 446 (621)
...+|+++++.++.+.+.+.+.+ .++|+++.-.+....+ .+..++.+ ...+.+++ .++..++.+|.+|
T Consensus 75 ~~~~D~~~~~~v~~~~~~~~~~~--g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~--~~~~~~~~~g~iv 150 (287)
T 3pxx_A 75 TAEVDVRDRAAVSRELANAVAEF--GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVH--AALPYLTSGASII 150 (287)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHH--HHGGGCCTTCEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHc--CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHH--HHHHHhhcCcEEE
Confidence 46789999998887776665544 4799999988765433 12222221 12223333 3444557788876
Q ss_pred E
Q psy13508 447 C 447 (621)
Q Consensus 447 ~ 447 (621)
.
T Consensus 151 ~ 151 (287)
T 3pxx_A 151 T 151 (287)
T ss_dssp E
T ss_pred E
Confidence 4
No 464
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=28.37 E-value=49 Score=33.63 Aligned_cols=97 Identities=21% Similarity=0.188 Sum_probs=50.5
Q ss_pred CCCCCcceEEEeccCCChhHHH---HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEY---VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqy---l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +||=.|| .||.-+. ++.. ..+++++++..+.. ++ +..-.|.+..-|.. .+..+.
T Consensus 157 ~~~g~--~VlV~Ga-sg~iG~~~~~~a~~--~Ga~Vi~~~~~~~~---~~---------~~~~~ga~~v~~~~-~~~~~~ 218 (342)
T 4eye_A 157 LRAGE--TVLVLGA-AGGIGTAAIQIAKG--MGAKVIAVVNRTAA---TE---------FVKSVGADIVLPLE-EGWAKA 218 (342)
T ss_dssp CCTTC--EEEESST-TSHHHHHHHHHHHH--TTCEEEEEESSGGG---HH---------HHHHHTCSEEEESS-TTHHHH
T ss_pred CCCCC--EEEEECC-CCHHHHHHHHHHHH--cCCEEEEEeCCHHH---HH---------HHHhcCCcEEecCc-hhHHHH
Confidence 46777 7887776 2333332 2333 34689998865321 10 11112432222322 233333
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+.+.+.+.++|+|+.= .|... +..++..|++||.+|+=
T Consensus 219 ----v~~~~~~~g~Dvvid~-----~g~~~-------------~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 219 ----VREATGGAGVDMVVDP-----IGGPA-------------FDDAVRTLASEGRLLVV 256 (342)
T ss_dssp ----HHHHTTTSCEEEEEES-----CC--C-------------HHHHHHTEEEEEEEEEC
T ss_pred ----HHHHhCCCCceEEEEC-----CchhH-------------HHHHHHhhcCCCEEEEE
Confidence 3444556789999743 33221 22467889999999864
No 465
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=28.23 E-value=42 Score=30.08 Aligned_cols=40 Identities=13% Similarity=0.051 Sum_probs=24.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
...+|+|+|=.+.... ..+.+ ..+.-+.++|||||.|++-
T Consensus 61 ~~~fD~V~~~~~l~~~-~~~~~---------~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 61 ESSFDIILSGLVPGST-TLHSA---------EILAEIARILRPGGCLFLK 100 (176)
T ss_dssp SSCEEEEEECCSTTCC-CCCCH---------HHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEECChhhhc-ccCHH---------HHHHHHHHHCCCCEEEEEE
Confidence 4579999974433221 01111 1345567899999999983
No 466
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=27.94 E-value=47 Score=34.10 Aligned_cols=77 Identities=6% Similarity=0.049 Sum_probs=45.7
Q ss_pred cceEEEeccCCChhHHHHHHhcCCC-CeE-EEEecCCCCCCCCCcccCCCCCCccccC-CCcccccCCChhhHHHHHHHH
Q psy13508 317 LLYFADVCAGPGGFSEYVLYRKKWR-AKG-IGFTLTGSHDFKLDDFFAGPSETFEPYY-GVKGNGDVYDPENILSLHEFV 393 (621)
Q Consensus 317 ~~~vlDLcaaPGGwsqyl~~r~~~~-~k~-~GvdL~~~~~~~l~~~~~~~~~~~~~~~-Gv~~~GDI~~~~~~~~l~~~v 393 (621)
.++++||+||-||++.-+.+ .+.. -.+ +++|+.+.. .+.+...+ +....|||++... +.+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a-----------~~ty~~N~~~~~~~~DI~~~~~-~~i~~-- 74 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYER-SSININATFIPFDINEIA-----------NKIYSKNFKEEVQVKNLDSISI-KQIES-- 74 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHH-SSCCCCEEEEEECCCHHH-----------HHHHHHHHCCCCBCCCTTTCCH-HHHHH--
T ss_pred CCEEEEECCChhHHHHHHHH-cCCCceEEEEEEECCHHH-----------HHHHHHHCCCCcccCChhhcCH-HHhcc--
Confidence 45899999999999986654 4432 345 688775310 00111111 1245789987542 22211
Q ss_pred HhhcCCCcccEEEecCCCCCCCc
Q psy13508 394 MKSTKGRGVHFMMADGGFSVEGQ 416 (621)
Q Consensus 394 ~~~~~~~~vDlVlsDg~~~~~G~ 416 (621)
..+|++++ +|+|++.
T Consensus 75 ------~~~Dil~g--gpPCQ~f 89 (327)
T 3qv2_A 75 ------LNCNTWFM--SPPCQPY 89 (327)
T ss_dssp ------TCCCEEEE--CCCCTTC
T ss_pred ------CCCCEEEe--cCCccCc
Confidence 26899986 7888876
No 467
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=27.92 E-value=34 Score=35.00 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=52.4
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHh-cCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYR-KKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLH 390 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r-~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~ 390 (621)
+++|+ ++|-.|+ .||.-..+.+. ....+++++++..+. +++ ...-.|.+..-|..+.+..+.+.
T Consensus 160 ~~~g~--~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~~---------~~~~~g~~~~~~~~~~~~~~~~~ 224 (354)
T 2j8z_A 160 VQAGD--YVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQK---KLQ---------MAEKLGAAAGFNYKKEDFSEATL 224 (354)
T ss_dssp CCTTC--EEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHH---HHH---------HHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCC--EEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCHH---HHH---------HHHHcCCcEEEecCChHHHHHHH
Confidence 36677 7777764 34444433221 113468999886431 110 00112433333555544444443
Q ss_pred HHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 391 EFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 391 ~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+ .+.+.++|+|+.= .|.... ..++.+|++||.+|+=-
T Consensus 225 ~----~~~~~~~d~vi~~-----~G~~~~-------------~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 225 K----FTKGAGVNLILDC-----IGGSYW-------------EKNVNCLALDGRWVLYG 261 (354)
T ss_dssp H----HTTTSCEEEEEES-----SCGGGH-------------HHHHHHEEEEEEEEECC
T ss_pred H----HhcCCCceEEEEC-----CCchHH-------------HHHHHhccCCCEEEEEe
Confidence 3 3445679988743 333221 23567899999998743
No 468
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=27.81 E-value=34 Score=35.37 Aligned_cols=99 Identities=15% Similarity=0.091 Sum_probs=50.2
Q ss_pred CCCCcceEEEeccCCChhHHHH---HHhcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 313 GPGELLYFADVCAGPGGFSEYV---LYRKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 313 ~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
++|+ +||=.|+ |+.-+.+ ++.. .+ ++++++..+.. + .+..-.|.+..-|..+.+..+.
T Consensus 181 ~~g~--~VlV~Ga--G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~---~---------~~a~~lGa~~vi~~~~~~~~~~ 242 (370)
T 4ej6_A 181 KAGS--TVAILGG--GVIGLLTVQLARLA--GATTVILSTRQATK---R---------RLAEEVGATATVDPSAGDVVEA 242 (370)
T ss_dssp CTTC--EEEEECC--SHHHHHHHHHHHHT--TCSEEEEECSCHHH---H---------HHHHHHTCSEEECTTSSCHHHH
T ss_pred CCCC--EEEEECC--CHHHHHHHHHHHHc--CCCEEEEECCCHHH---H---------HHHHHcCCCEEECCCCcCHHHH
Confidence 6777 7777886 4544433 2322 34 88888764311 0 0111234432223333333333
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+.+. ...+.+ ++|+|+- +.|... .+..++.+|++||.+|+=
T Consensus 243 i~~~-~~~~~g-g~Dvvid-----~~G~~~------------~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 243 IAGP-VGLVPG-GVDVVIE-----CAGVAE------------TVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp HHST-TSSSTT-CEEEEEE-----CSCCHH------------HHHHHHHHEEEEEEEEEC
T ss_pred HHhh-hhccCC-CCCEEEE-----CCCCHH------------HHHHHHHHhccCCEEEEE
Confidence 2220 003334 8999874 334221 122467889999999874
No 469
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=27.54 E-value=30 Score=32.03 Aligned_cols=36 Identities=8% Similarity=-0.034 Sum_probs=25.7
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
.++|+|++++++..-. + -+.++|+|||.+|+=+-.+
T Consensus 142 ~~~D~i~~~~~~~~~~----~-------------~~~~~L~pgG~lv~~~~~~ 177 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIP----T-------------ALMTQLDEGGILVLPVGEE 177 (210)
T ss_dssp CCEEEEEESSBCSSCC----T-------------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEEccchhhhh----H-------------HHHHhcccCcEEEEEEcCC
Confidence 4789999987664322 1 2467999999999976553
No 470
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=27.33 E-value=2.7e+02 Score=27.81 Aligned_cols=32 Identities=6% Similarity=-0.231 Sum_probs=24.5
Q ss_pred eEEEeccCCChhHHHHHHhc---C-CCCeEEEEecC
Q psy13508 319 YFADVCAGPGGFSEYVLYRK---K-WRAKGIGFTLT 350 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~---~-~~~k~~GvdL~ 350 (621)
.+|.+|.+-|+-+-++..-. + +.++++++|.-
T Consensus 109 ~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dtf 144 (282)
T 2wk1_A 109 DLVETGVWRGGACILMRGILRAHDVRDRTVWVADSF 144 (282)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECS
T ss_pred cEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECC
Confidence 69999999999887654322 2 36889999964
No 471
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=27.32 E-value=31 Score=30.60 Aligned_cols=63 Identities=13% Similarity=-0.019 Sum_probs=38.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcccceeEEecCCCC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTS 154 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~F~~v~~~KP~aS 154 (621)
..+|+|++++. ..... .+..+.++ |||.+++-.+... ....+...+++.--.+....+..+
T Consensus 99 ~~~D~i~~~~~------~~~~~---------~l~~~~~~--~gG~l~~~~~~~~--~~~~~~~~l~~~g~~~~~~~~~~~ 159 (183)
T 2yxd_A 99 LEFNKAFIGGT------KNIEK---------IIEILDKK--KINHIVANTIVLE--NAAKIINEFESRGYNVDAVNVFIS 159 (183)
T ss_dssp CCCSEEEECSC------SCHHH---------HHHHHHHT--TCCEEEEEESCHH--HHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCcEEEECCc------ccHHH---------HHHHHhhC--CCCEEEEEecccc--cHHHHHHHHHHcCCeEEEEEeeee
Confidence 47899998876 11111 11222333 9999999886653 556777788777555666555444
Q ss_pred CC
Q psy13508 155 RP 156 (621)
Q Consensus 155 R~ 156 (621)
+.
T Consensus 160 ~~ 161 (183)
T 2yxd_A 160 YA 161 (183)
T ss_dssp EE
T ss_pred hh
Confidence 43
No 472
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.28 E-value=3.1e+02 Score=25.93 Aligned_cols=74 Identities=12% Similarity=-0.020 Sum_probs=45.2
Q ss_pred eEEEeccCCChhHHHHHHhc-CCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRK-KWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~-~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++|=.|+ .||.-..+..+. ...+++++++...... . ......|+++++.++.+.+.+.+.
T Consensus 24 ~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------~------~~~~~~d~~d~~~v~~~~~~~~~~- 84 (251)
T 3orf_A 24 NILVLGG-SGALGAEVVKFFKSKSWNTISIDFRENPN-----------A------DHSFTIKDSGEEEIKSVIEKINSK- 84 (251)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------S------SEEEECSCSSHHHHHHHHHHHHTT-
T ss_pred EEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------c------ccceEEEeCCHHHHHHHHHHHHHH-
Confidence 4554554 466655554432 2356888888764210 0 012356799988888777766553
Q ss_pred CCCcccEEEecCCCC
Q psy13508 398 KGRGVHFMMADGGFS 412 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~ 412 (621)
..++|+|+.-.+..
T Consensus 85 -~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 85 -SIKVDTFVCAAGGW 98 (251)
T ss_dssp -TCCEEEEEECCCCC
T ss_pred -cCCCCEEEECCccC
Confidence 35799999987754
No 473
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=27.21 E-value=42 Score=32.57 Aligned_cols=58 Identities=9% Similarity=-0.051 Sum_probs=37.8
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHc--ccceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYR--SYKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~--~F~~v~~~K 150 (621)
..+|+|++|+. +.. ..+.-+.++|+|||.+++=+.... ....++..++. .|..+..+.
T Consensus 170 ~~~D~v~~~~~-------~~~---------~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 170 GSVDRAVLDML-------APW---------EVLDAVSRLLVAGGVLMVYVATVT--QLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp TCEEEEEEESS-------CGG---------GGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHHSSBCCCEEEC
T ss_pred CceeEEEECCc-------CHH---------HHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHhcCCcCCcEEEE
Confidence 46899998753 111 124556789999999999776542 34556666654 577766664
No 474
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=26.93 E-value=1.5e+02 Score=28.29 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=28.2
Q ss_pred cccccCCChhhHHHHHHHHHhhcCCCcccEEEecCCCCC
Q psy13508 375 KGNGDVYDPENILSLHEFVMKSTKGRGVHFMMADGGFSV 413 (621)
Q Consensus 375 ~~~GDI~~~~~~~~l~~~v~~~~~~~~vDlVlsDg~~~~ 413 (621)
..++|+++++.++.+.+.+.+.+ .++|+++.-.+...
T Consensus 63 ~~~~D~~~~~~v~~~~~~~~~~~--g~id~li~~Ag~~~ 99 (266)
T 3oig_A 63 ILPCDVTNDAEIETCFASIKEQV--GVIHGIAHCIAFAN 99 (266)
T ss_dssp EEECCCSSSHHHHHHHHHHHHHH--SCCCEEEECCCCCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHHh--CCeeEEEEcccccc
Confidence 46789999998888777776554 47999998877543
No 475
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=26.91 E-value=29 Score=33.10 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=24.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 123 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~K 123 (621)
.++|+|++|... .... ..+..+.++|+|||.+|+-
T Consensus 146 ~~fD~I~~~~~~-----~~~~---------~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 146 SSIDLFFLDADK-----ENYP---------NYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TCEEEEEECSCG-----GGHH---------HHHHHHHHHEEEEEEEEEE
T ss_pred CCcCEEEEeCCH-----HHHH---------HHHHHHHHHcCCCeEEEEE
Confidence 579999998531 1111 2345677899999999985
No 476
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=26.85 E-value=1.2e+02 Score=34.86 Aligned_cols=96 Identities=21% Similarity=0.183 Sum_probs=51.9
Q ss_pred CCCCCcceEEEeccCCChhHHHH---HHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYV---LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +||=.|+ .||--+.+ .+. ..+++++.+-.. +. .+. . .|.+.--|-.+.+..+.
T Consensus 343 l~~G~--~VLI~ga-aGgvG~~aiqlAk~--~Ga~V~~t~~~~----k~-~~l-------~--lga~~v~~~~~~~~~~~ 403 (795)
T 3slk_A 343 LRPGE--SLLVHSA-AGGVGMAAIQLARH--LGAEVYATASED----KW-QAV-------E--LSREHLASSRTCDFEQQ 403 (795)
T ss_dssp CCTTC--CEEEEST-TBHHHHHHHHHHHH--TTCCEEEECCGG----GG-GGS-------C--SCGGGEECSSSSTHHHH
T ss_pred CCCCC--EEEEecC-CCHHHHHHHHHHHH--cCCEEEEEeChH----Hh-hhh-------h--cChhheeecCChhHHHH
Confidence 57888 6776664 34443332 233 346888876321 11 111 1 33322223333333333
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
+.+.+.++++|+|+-=. |.+..+ .++.+|++||.||.=
T Consensus 404 ----i~~~t~g~GvDvVld~~-----gg~~~~-------------~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 404 ----FLGATGGRGVDVVLNSL-----AGEFAD-------------ASLRMLPRGGRFLEL 441 (795)
T ss_dssp ----HHHHSCSSCCSEEEECC-----CTTTTH-------------HHHTSCTTCEEEEEC
T ss_pred ----HHHHcCCCCeEEEEECC-----CcHHHH-------------HHHHHhcCCCEEEEe
Confidence 44557788999998622 222222 367899999999974
No 477
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=26.73 E-value=63 Score=32.86 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=38.6
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCc-ChHHHHHHHHcccceeEEecCCC
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTP-FSAGLLYLLYRSYKQVCIFKPNT 153 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~-~~~~l~~~l~~~F~~v~~~KP~a 153 (621)
.++|+|++++. ..+.. ..+.-+.++|+|||.+|+-...+... .+........+-|+.....-|..
T Consensus 187 ~~FDvV~~~a~-----~~d~~---------~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~~~~~~p~~ 252 (298)
T 3fpf_A 187 LEFDVLMVAAL-----AEPKR---------RVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRRAGVVLPSG 252 (298)
T ss_dssp CCCSEEEECTT-----CSCHH---------HHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEEEEEECCCT
T ss_pred CCcCEEEECCC-----ccCHH---------HHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhheeEECCCC
Confidence 46888887654 11111 13455778999999999987655100 00111113445688888887764
Q ss_pred C
Q psy13508 154 S 154 (621)
Q Consensus 154 S 154 (621)
.
T Consensus 253 ~ 253 (298)
T 3fpf_A 253 K 253 (298)
T ss_dssp T
T ss_pred C
Confidence 3
No 478
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=26.65 E-value=44 Score=34.27 Aligned_cols=31 Identities=26% Similarity=0.197 Sum_probs=23.1
Q ss_pred ceEEEeccCCChhHHHHHHhcCCCCeEEEEecC
Q psy13508 318 LYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLT 350 (621)
Q Consensus 318 ~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~ 350 (621)
++++||+||.||++.-+.+ .+ ...++++|..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~-aG-~~~v~~~e~d 42 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALES-CG-AECVYSNEWD 42 (327)
T ss_dssp CEEEEETCTTTHHHHHHHH-TT-CEEEEEECCC
T ss_pred CcEEEECCCcCHHHHHHHH-CC-CeEEEEEeCC
Confidence 4899999999999997765 33 2346677664
No 479
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=26.42 E-value=24 Score=31.74 Aligned_cols=44 Identities=14% Similarity=0.256 Sum_probs=27.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
..++|+|++|.... ....+. .+..+ .+.++|+|||.+++=....
T Consensus 114 ~~~fD~i~~~~~~~---~~~~~~------~~~~l-~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 114 KLQFDLVLLDPPYA---KQEIVS------QLEKM-LERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp TCCEEEEEECCCGG---GCCHHH------HHHHH-HHTTCEEEEEEEEEEEETT
T ss_pred CCCCCEEEECCCCC---chhHHH------HHHHH-HHhcccCCCCEEEEEeCCc
Confidence 45799999986532 111121 11112 2578999999999866554
No 480
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=26.40 E-value=38 Score=34.30 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=23.9
Q ss_pred cccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q psy13508 76 GVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 122 (621)
Q Consensus 76 ~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~ 122 (621)
.+|+|++|.++. +... .+.-..++|+|||.||+
T Consensus 151 ~fD~v~~d~sf~-----sl~~---------vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 151 LPSFASIDVSFI-----SLNL---------ILPALAKILVDGGQVVA 183 (291)
T ss_dssp CCSEEEECCSSS-----CGGG---------THHHHHHHSCTTCEEEE
T ss_pred CCCEEEEEeeHh-----hHHH---------HHHHHHHHcCcCCEEEE
Confidence 499999999864 1111 23446689999999988
No 481
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.25 E-value=1.3e+02 Score=28.18 Aligned_cols=37 Identities=22% Similarity=0.074 Sum_probs=26.9
Q ss_pred ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCC
Q psy13508 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFS 87 (621)
Q Consensus 51 ~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn 87 (621)
.++|+++++..+.+.+.+.+.+..+++|+|++=.+..
T Consensus 47 ~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 83 (236)
T 1ooe_A 47 VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW 83 (236)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred EeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCccc
Confidence 6899999988777766665544325799999876643
No 482
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=26.10 E-value=38 Score=33.10 Aligned_cols=42 Identities=10% Similarity=-0.060 Sum_probs=25.2
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEc
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 125 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF 125 (621)
..+|+|++.+......... ....+.-+.++|+|||.+++=.+
T Consensus 183 ~~fD~i~~~~~~~~~~~~~---------~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRER---------VPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCEEEEEECSSGGGSCGGG---------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEccchhhCCHHH---------HHHHHHHHHHhcCCCcEEEEEEe
Confidence 4688888776543221111 11234556789999999887443
No 483
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=26.09 E-value=64 Score=32.89 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCCCCcceEEEeccCCChhHHHHHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccC---CChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDV---YDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI---~~~~~~~~ 388 (621)
+++|+ +||=.|+|+=|-....+-+.....++++++.. .+..+..... ....+ .+....+.
T Consensus 177 ~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~--------------~~~~~~a~~l-~~~~~~~~~~~~~~~~ 239 (363)
T 3m6i_A 177 VRLGD--PVLICGAGPIGLITMLCAKAAGACPLVITDID--------------EGRLKFAKEI-CPEVVTHKVERLSAEE 239 (363)
T ss_dssp CCTTC--CEEEECCSHHHHHHHHHHHHTTCCSEEEEESC--------------HHHHHHHHHH-CTTCEEEECCSCCHHH
T ss_pred CCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC--------------HHHHHHHHHh-chhcccccccccchHH
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVC 447 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~ 447 (621)
+.+.+.+.+.+.++|+|+ ++.|.+..-+. ++.+|++||.+|+
T Consensus 240 ~~~~v~~~t~g~g~Dvvi-----d~~g~~~~~~~------------~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 240 SAKKIVESFGGIEPAVAL-----ECTGVESSIAA------------AIWAVKFGGKVFV 281 (363)
T ss_dssp HHHHHHHHTSSCCCSEEE-----ECSCCHHHHHH------------HHHHSCTTCEEEE
T ss_pred HHHHHHHHhCCCCCCEEE-----ECCCChHHHHH------------HHHHhcCCCEEEE
No 484
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=26.07 E-value=31 Score=32.94 Aligned_cols=45 Identities=11% Similarity=0.129 Sum_probs=28.0
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
...+|+|++-.....-+..+ ....+.-+.++|+|||.+++=.+..
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLEN---------KNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHH---------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 35788888765433321111 1123455678999999999987654
No 485
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=25.91 E-value=36 Score=32.43 Aligned_cols=57 Identities=7% Similarity=0.005 Sum_probs=35.5
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEe
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
..+|+|++|.. +.. ..+.-+.++|+|||.+++=.... +....++..+++. |..+..+
T Consensus 165 ~~~D~v~~~~~-------~~~---------~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 165 AAYDGVALDLM-------EPW---------KVLEKAALALKPDRFLVAYLPNI--TQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp TCEEEEEEESS-------CGG---------GGHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHTTTTEEEEEEE
T ss_pred CCcCEEEECCc-------CHH---------HHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceEEEE
Confidence 46888888642 111 12455678999999999866543 2345666666544 7665554
No 486
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=25.74 E-value=1.1e+02 Score=31.64 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=51.3
Q ss_pred CCCCCcceEEEeccCCChhHHHHHH--hcCCCC-eEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYVLY--RKKWRA-KGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl~~--r~~~~~-k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +||=.|+ |+--..+.+ +. ..+ ++++++..+.. + .+..-.|.+..=|-.+.+..+.
T Consensus 211 ~~~g~--~VlV~Ga--G~vG~~aiqlak~-~Ga~~Vi~~~~~~~~---~---------~~~~~lGa~~vi~~~~~~~~~~ 273 (404)
T 3ip1_A 211 IRPGD--NVVILGG--GPIGLAAVAILKH-AGASKVILSEPSEVR---R---------NLAKELGADHVIDPTKENFVEA 273 (404)
T ss_dssp CCTTC--EEEEECC--SHHHHHHHHHHHH-TTCSEEEEECSCHHH---H---------HHHHHHTCSEEECTTTSCHHHH
T ss_pred CCCCC--EEEEECC--CHHHHHHHHHHHH-cCCCEEEEECCCHHH---H---------HHHHHcCCCEEEcCCCCCHHHH
Confidence 47787 6777886 554443322 22 235 89998755311 0 0111234322223333333334
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhh-hhccCCCcEEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVS-LFIVRPEGHFVCKV 449 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~a-l~~Lr~GG~fV~K~ 449 (621)
+.+.+.+.++|+|+- +.|.... .+.++.-+ ...+++||.+|+=-
T Consensus 274 ----i~~~t~g~g~D~vid-----~~g~~~~--------~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 274 ----VLDYTNGLGAKLFLE-----ATGVPQL--------VWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp ----HHHHTTTCCCSEEEE-----CSSCHHH--------HHHHHHHHHHHCSCCCCEEEECS
T ss_pred ----HHHHhCCCCCCEEEE-----CCCCcHH--------HHHHHHHHHHhccCCCcEEEEeC
Confidence 344456778999973 3443310 11111112 25569999998743
No 487
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=25.62 E-value=32 Score=31.65 Aligned_cols=45 Identities=9% Similarity=-0.065 Sum_probs=28.9
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
...+|+|++......-. +. .....+.-+.++|+|||.+++=.+..
T Consensus 105 ~~~~D~v~~~~~l~~~~----~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVP----DD-----RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SSCEEEEEEESCGGGSC----HH-----HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCceeEEEEechhhcCC----HH-----HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 45799999865332211 11 11223455678999999999988766
No 488
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=25.60 E-value=67 Score=29.81 Aligned_cols=41 Identities=12% Similarity=-0.034 Sum_probs=25.9
Q ss_pred HHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEe
Q psy13508 107 FLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIF 149 (621)
Q Consensus 107 l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~ 149 (621)
+..+..+|+|||.|++..-.. .....++..+.+. |..+...
T Consensus 139 l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 139 LDTFKRILPENGEIHFKTDNR--GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp HHHHHHHSCTTCEEEEEESCH--HHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHHCCCeeeecc
Confidence 455778999999999976321 1334455555543 7666655
No 489
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=25.50 E-value=44 Score=34.19 Aligned_cols=99 Identities=14% Similarity=0.079 Sum_probs=52.4
Q ss_pred CCCCCcceEEEeccCCChhHHHH---HHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHH
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYV---LYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILS 388 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~ 388 (621)
+++|+ +++-.|++ ||.-+.+ +... .+++++++..+.. ++ ...-.|.+..-|..+.+..+.
T Consensus 168 ~~~g~--~vlV~Gas-ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~---~~---------~~~~~ga~~~~d~~~~~~~~~ 230 (351)
T 1yb5_A 168 VKAGE--SVLVHGAS-GGVGLAACQIARAY--GLKILGTAGTEEG---QK---------IVLQNGAHEVFNHREVNYIDK 230 (351)
T ss_dssp CCTTC--EEEEETCS-SHHHHHHHHHHHHT--TCEEEEEESSHHH---HH---------HHHHTTCSEEEETTSTTHHHH
T ss_pred CCCcC--EEEEECCC-ChHHHHHHHHHHHC--CCEEEEEeCChhH---HH---------HHHHcCCCEEEeCCCchHHHH
Confidence 36677 78888863 4433322 2222 4689998765311 10 011124332334555444444
Q ss_pred HHHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEE
Q psy13508 389 LHEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 449 (621)
Q Consensus 389 l~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~ 449 (621)
+.+ .+.+.++|+|+.= .|... +..++..|++||.+|+=-
T Consensus 231 ~~~----~~~~~~~D~vi~~-----~G~~~-------------~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 231 IKK----YVGEKGIDIIIEM-----LANVN-------------LSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHH----HHCTTCEEEEEES-----CHHHH-------------HHHHHHHEEEEEEEEECC
T ss_pred HHH----HcCCCCcEEEEEC-----CChHH-------------HHHHHHhccCCCEEEEEe
Confidence 443 3445689998743 23211 223578899999998643
No 490
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=25.30 E-value=2.1e+02 Score=27.44 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=27.8
Q ss_pred ccccCCChHhHHHHHHHHHhhcCCCcccEEEecCCCCCC
Q psy13508 51 GNGDVYDPENILSLHEFVMKSSKGRGVHFMMADGGFSVE 89 (621)
Q Consensus 51 ~~GDi~~~~~~~~l~~~~~~~~~~~~~dlVlsDgapn~s 89 (621)
.++|+++++..+++.+.+.+.+ +++|++++=.+....
T Consensus 73 ~~~Dv~~~~~v~~~~~~~~~~~--g~id~lvnnAg~~~~ 109 (270)
T 3is3_A 73 IKADIRQVPEIVKLFDQAVAHF--GHLDIAVSNSGVVSF 109 (270)
T ss_dssp EECCTTSHHHHHHHHHHHHHHH--SCCCEEECCCCCCCC
T ss_pred EEcCCCCHHHHHHHHHHHHHHc--CCCCEEEECCCCCCC
Confidence 7899999988887777665554 378999987665443
No 491
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=25.29 E-value=81 Score=31.92 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=31.8
Q ss_pred CcccEEEecCCCCCCCChhh--hH--------HH---HHHHHHHHHHHHHHhcCCCCEEEE---eEccCCCcChHHHHHH
Q psy13508 75 RGVHFMMADGGFSVEGQENI--QE--------IL---SKRLYLCQFLVSLFIVRPEGHFVC---KVFDMFTPFSAGLLYL 138 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~--d~--------~~---~~~L~l~~l~~A~~~L~~gG~fV~---KvF~g~~~~~~~l~~~ 138 (621)
.++|.|+.|.-.+-+|.... |. .. ...+...-+..|..+|+ ||.+|- .++.. +....+.+.
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~--Ene~~v~~~ 249 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQE--ENEDVVRDA 249 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGG--GTHHHHHHH
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChH--HhHHHHHHH
Confidence 36899999977666665321 21 01 11222223445777786 998883 44444 233344444
Q ss_pred HHcc
Q psy13508 139 LYRS 142 (621)
Q Consensus 139 l~~~ 142 (621)
++++
T Consensus 250 l~~~ 253 (309)
T 2b9e_A 250 LQQN 253 (309)
T ss_dssp HTTS
T ss_pred HHhC
Confidence 5544
No 492
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=25.29 E-value=38 Score=32.24 Aligned_cols=40 Identities=5% Similarity=0.041 Sum_probs=27.5
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEc
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVF 125 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF 125 (621)
...+|+|+|.++.... +.+ ..+.-+.++|+|||.+++=..
T Consensus 112 ~~~fD~v~~~~~l~~~---~~~---------~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI---GFE---------RGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TTCEEEEEEESCSCCC---CHH---------HHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEecChHhhc---CHH---------HHHHHHHHHcCCCcEEEEEEe
Confidence 3578999988765443 111 134567789999999998763
No 493
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=25.24 E-value=38 Score=34.08 Aligned_cols=46 Identities=4% Similarity=-0.146 Sum_probs=28.4
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccC
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDM 127 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g 127 (621)
.+.+|+|+|=.+....- +..+. ...+.-+.++|+|||.|++-+...
T Consensus 127 ~~~FD~V~~~~~lhy~~--~~~~~------~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSF--HPRHY------ATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SSCEEEEEEESCGGGTC--STTTH------HHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCeeEEEECchHHHhC--CHHHH------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 45799998765432211 11121 124566778999999999876644
No 494
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=25.23 E-value=72 Score=32.23 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=52.4
Q ss_pred CCCCCcceEEEecc-CCChhHHH-HHHhcCCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHH
Q psy13508 312 LGPGELLYFADVCA-GPGGFSEY-VLYRKKWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSL 389 (621)
Q Consensus 312 ~~~g~~~~vlDLca-aPGGwsqy-l~~r~~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l 389 (621)
+++|+ ++|-.|+ |+=|.... ++... .+++++++..+. +++. ..-.|.+..-|..+.+..+.+
T Consensus 164 ~~~g~--~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~---~~~~---------~~~~ga~~~~d~~~~~~~~~~ 227 (343)
T 2eih_A 164 VRPGD--DVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSED---KLRR---------AKALGADETVNYTHPDWPKEV 227 (343)
T ss_dssp CCTTC--EEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHH---HHHH---------HHHHTCSEEEETTSTTHHHHH
T ss_pred CCCCC--EEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH---HHHH---------HHhcCCCEEEcCCcccHHHHH
Confidence 36677 7898887 44343322 23332 468999876421 1100 011243222344444433443
Q ss_pred HHHHHhhcCCCcccEEEecCCCCCCCchhhHHHHHHHHHHHHHHhhhhccCCCcEEEEE
Q psy13508 390 HEFVMKSTKGRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCK 448 (621)
Q Consensus 390 ~~~v~~~~~~~~vDlVlsDg~~~~~G~~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K 448 (621)
.+ .+.+.++|+|+.=.+. .. +..++..|++||.+|+=
T Consensus 228 ~~----~~~~~~~d~vi~~~g~-----~~-------------~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 228 RR----LTGGKGADKVVDHTGA-----LY-------------FEGVIKATANGGRIAIA 264 (343)
T ss_dssp HH----HTTTTCEEEEEESSCS-----SS-------------HHHHHHHEEEEEEEEES
T ss_pred HH----HhCCCCceEEEECCCH-----HH-------------HHHHHHhhccCCEEEEE
Confidence 33 3445689999854441 11 12356788999998864
No 495
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=25.21 E-value=75 Score=32.19 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=21.1
Q ss_pred CCCCCcceEEEeccCCChhHHHH---HHhcCCCCeEEEEecCC
Q psy13508 312 LGPGELLYFADVCAGPGGFSEYV---LYRKKWRAKGIGFTLTG 351 (621)
Q Consensus 312 ~~~g~~~~vlDLcaaPGGwsqyl---~~r~~~~~k~~GvdL~~ 351 (621)
+++|+ +||-.|+ |+.-+.+ ++.. .+++++++..+
T Consensus 174 ~~~g~--~VlV~Ga--G~vG~~a~qla~~~--Ga~Vi~~~~~~ 210 (348)
T 3two_A 174 VTKGT--KVGVAGF--GGLGSMAVKYAVAM--GAEVSVFARNE 210 (348)
T ss_dssp CCTTC--EEEEESC--SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCCCC--EEEEECC--cHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 36787 7888886 4443332 3333 46899988654
No 496
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=25.18 E-value=86 Score=29.71 Aligned_cols=40 Identities=8% Similarity=0.074 Sum_probs=25.5
Q ss_pred CCcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeE
Q psy13508 74 GRGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKV 124 (621)
Q Consensus 74 ~~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~Kv 124 (621)
...+|+|++-.....- .+. ...+.-+.++|+|||.+++-+
T Consensus 106 ~~~fD~v~~~~~l~~~--~~~---------~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYI--ASF---------DDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp TTCEEEEEEESCGGGC--SCH---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeEEEEEchhhhhh--hhH---------HHHHHHHHHHcCCCcEEEEEe
Confidence 3578888886543222 111 123455678999999999964
No 497
>3izx_A Structural protein VP3; cytoplasmic polyhedrosis virus, 3D reconstruction, cryoem, F model; 3.10A {Bombyx mori cypovirus 1} PDB: 3iz3_A 3j17_A* 3cnf_T
Probab=25.16 E-value=1.7e+02 Score=34.15 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=52.6
Q ss_pred CCcccEEEecCCCCCCCc-hhhHHHHHHHHHHHHHHhhhhccCCCcEEEEEEccCCCCChHHHHHHHHhc---cceeEee
Q psy13508 399 GRGVHFMMADGGFSVEGQ-ENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS---YKQVCIF 474 (621)
Q Consensus 399 ~~~vDlVlsDg~~~~~G~-~~~de~~~~~L~l~~l~~al~~Lr~GG~fV~K~F~~~~~~s~~ll~~l~~~---F~~V~i~ 474 (621)
.-.+|+|+||+.-...+. +.+-+ ..+.++..++. -.-.+++|+=-.....-.++...|.++ |-...++
T Consensus 607 Ni~~divISDidQs~~~~f~~m~~-----~t~~~l~~c~s---~s~~~l~Klnyps~~lLNsI~e~L~~~g~~f~~~~iV 678 (1058)
T 3izx_A 607 NISADFIICDINSYEDQSFESMFS-----ETISVVTTCAS---AATRALVKINHPSEYMINSVIERLSQLGGVFYHTALL 678 (1058)
T ss_dssp CCCCSEEEECCCCCCTTCSHHHHH-----HHHHHHHHHHH---SSSEEEEEEECCHHHHHHHHHHHHHHSSSSCCEEEEE
T ss_pred cccccEEEEeccccccchHHHHHH-----HHHHHHHHHHh---hhhcEEEEecCchHHHHHHHHHHHHHhCCeEEeeeEE
Confidence 447999999997655422 22222 22223322232 334578898765332233444556655 4456689
Q ss_pred cCCCCCCCCceEEEEEee
Q psy13508 475 KPNTSRPANSERYIVCKW 492 (621)
Q Consensus 475 KP~aSR~~ssE~YlVc~g 492 (621)
|-..+.+.+.|.|++-.+
T Consensus 679 r~a~Qnp~T~E~fl~i~~ 696 (1058)
T 3izx_A 679 KTASQNPYSYETYIYITP 696 (1058)
T ss_dssp ECSSSCSSCCEEEEEEEC
T ss_pred EeeccCCCCceEEEEEec
Confidence 999999999999998763
No 498
>2vdw_B MRNA-capping enzyme small subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=25.05 E-value=3.8e+02 Score=26.18 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=51.1
Q ss_pred CCCcEEEEEEccCCCCChHHHHHHHHhccceeEeecCCCCCCCCceEEEEEeecCCCchhHHHHHHHHHHHH
Q psy13508 440 RPEGHFVCKVFDMFTPFSAGLLYLLYRSYKQVCIFKPNTSRPANSERYIVCKWKRPDCDTIRDFMFKLNKRL 511 (621)
Q Consensus 440 r~GG~fV~K~F~~~~~~s~~ll~~l~~~F~~V~i~KP~aSR~~ssE~YlVc~g~~~~~~~~~~~l~~~~~~l 511 (621)
..--..|+|+=+.|...-+.-++.-..+|..|+++|-.+-.---...-+||.+-. ...+..++..+...-
T Consensus 148 ~~Ek~civKlPTLFG~~vi~~~RVYCSlFk~VrLfK~~sDSWlKDSAimV~s~~~--~~ni~~f~s~vr~~t 217 (287)
T 2vdw_B 148 VNEKYCIIKLPTLFGRGVIDTMRIYCSLFKNVRLLKCVSDSWLKDSAIMVASDVC--KKNLDLFMSHVKSVT 217 (287)
T ss_dssp SSCSEEEEEESCCCSHHHHHHHHHHHHHEEEEEEEECTTSCSSSCCEEEEEEEEC--HHHHHHHHHHHHHHH
T ss_pred ccceEEEEEccchhcchhHHHHHHHHhhhheeeeeeccccchhccceEEEecCcc--hhhHHHHHHHHHHHh
Confidence 3467899999988874445555555577999999999998888888899999854 345555665554333
No 499
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=24.96 E-value=35 Score=33.49 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=35.6
Q ss_pred CcccEEEecCCCCCCCChhhhHHHHHHHHHHHHHHHHHhcCCCCEEEEeEccCCCcChHHHHHHHHcc-cceeEEec
Q psy13508 75 RGVHFMMADGGFSVEGQENIQEILSKRLYLCQFLVSLFIVRPEGHFVCKVFDMFTPFSAGLLYLLYRS-YKQVCIFK 150 (621)
Q Consensus 75 ~~~dlVlsDgapn~sG~~~~d~~~~~~L~l~~l~~A~~~L~~gG~fV~KvF~g~~~~~~~l~~~l~~~-F~~v~~~K 150 (621)
..+|+|++|.. +.+ ..+.-+.++|+|||.+++-..... ....+...+... |..+..++
T Consensus 178 ~~fD~Vi~~~~-------~~~---------~~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 178 QMYDAVIADIP-------DPW---------NHVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp CCEEEEEECCS-------CGG---------GSHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGTEEEEEEEE
T ss_pred CCccEEEEcCc-------CHH---------HHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEEEEE
Confidence 46888888642 111 124556789999999998665431 334555666554 76666553
No 500
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=24.95 E-value=91 Score=29.53 Aligned_cols=78 Identities=10% Similarity=-0.116 Sum_probs=46.8
Q ss_pred eEEEeccCCChhHHHHHHhc-CCCCeEEEEecCCCCCCCCCcccCCCCCCccccCCCcccccCCChhhHHHHHHHHHhhc
Q psy13508 319 YFADVCAGPGGFSEYVLYRK-KWRAKGIGFTLTGSHDFKLDDFFAGPSETFEPYYGVKGNGDVYDPENILSLHEFVMKST 397 (621)
Q Consensus 319 ~vlDLcaaPGGwsqyl~~r~-~~~~k~~GvdL~~~~~~~l~~~~~~~~~~~~~~~Gv~~~GDI~~~~~~~~l~~~v~~~~ 397 (621)
++|=.| |.||.-..+.++. ...++++.++..+.. +. ... ....+|+++++.++.+.+.+.+.+
T Consensus 9 ~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~-------~~~-----~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 9 RVLVYG-GRGALGSRCVQAFRARNWWVASIDVVENE---EA-------SAS-----VIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp EEEEET-TTSHHHHHHHHHHHTTTCEEEEEESSCCT---TS-------SEE-----EECCCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEC-CCcHHHHHHHHHHHhCCCEEEEEeCChhh---cc-------CCc-----EEEEcCCCCHHHHHHHHHHHHHHh
Confidence 455444 5566666555432 235688888765321 00 000 134789999888877766665544
Q ss_pred CCCcccEEEecCCCC
Q psy13508 398 KGRGVHFMMADGGFS 412 (621)
Q Consensus 398 ~~~~vDlVlsDg~~~ 412 (621)
...++|+|+.-.+..
T Consensus 73 ~~g~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 73 GDQKVDAILCVAGGW 87 (241)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred CCCCCCEEEEccccc
Confidence 225799999988754
Done!