RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13515
(526 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 31.2 bits (70), Expect = 0.024
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 411 YQCYHCLKIFKRKKDLPRHIMSVHMRIKYPCTICPREFQNKANLNHHLASH 461
Y C C K F K RH+ Y C +C ++F+ K +L H+ H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 31.2 bits (70), Expect = 0.024
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 464 KTYECENCSKIFNSKRKLYSHKRKDHMGLTYSCFMCNKTITSKNSLRDH 512
K Y C+ C K F K + H Y C +C K K+ L H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
Score = 31.2 bits (70), Expect = 0.029
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 147 CGKSFHREQSLRKHLREEENQDQLHCDKCRYKTFLKSNLIAH 188
CGKSF + +H+ C C K +K +L+ H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
Score = 31.2 bits (70), Expect = 0.029
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 284 CGKSFHREQSLRKHLREEENQDQLHCDKCRYKTFLKSNLIAH 325
CGKSF + +H+ C C K +K +L+ H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
Score = 30.8 bits (69), Expect = 0.031
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 33 CGKIFPRLGLLKEHTKTHHLKVRYTCDICSQDYSTKYYLKLHKQVH 78
CGK F H H Y C +C + + K++L H ++H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.1 bits (62), Expect = 0.30
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 249 FKCHQCSRKYMSKPSLRRHIYANHINKGVRFSCHLCGKSFHREQSLRKHLR 299
+ C QC + + K RH+ + + + C +CGK F + L H++
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLR--PYGCGVCGKKFKMKHHLVGHMK 51
Score = 28.1 bits (62), Expect = 0.34
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 112 FKCHQCSRKYMSKPSLRRHIYATHINKGVRFSCHLCGKSFHREQSLRKHLR 162
+ C QC + + K RH+ + + C +CGK F + L H++
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLR--PYGCGVCGKKFKMKHHLVGHMK 51
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 121
Score = 31.4 bits (71), Expect = 0.092
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 25 QVEFPCVYCGKIFPRLGLLKEHTKTHHLKVRYTCDICSQDYSTKYY--LKL----HKQVH 78
+ PC++C ++F H K H ++ D + ++Y +KL +
Sbjct: 13 RQHTPCLFCDRLFASAEETFSHCKLEH---QFNIDSMVHKHGLEFYGYIKLINFIRLKNP 69
Query: 79 EGKQHECEKCPRLFPSSKML 98
+ P + + L
Sbjct: 70 TVEYMNSIYNPVPWEKDEYL 89
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 29.2 bits (66), Expect = 0.10
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 462 AGKTYECENCSKIFNSKRKLYSHKRKDHMG 491
GK Y C++C K F+ L H ++ H
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS 31
Score = 26.5 bits (59), Expect = 0.73
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTHHLKVR-YTCDI 60
+ C CGK F R L H K H R + C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 26.5 bits (59), Expect = 0.77
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 411 YQCYHCLKIFKRKKDLPRHIMSVHMRIK-YPCTI 443
Y C C K F R L HI VH + + C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 26.5 bits (59), Expect = 0.86
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
+ C CGK F R L H++
Sbjct: 6 YICQSCGKGFSRPDHLNGHIK 26
Score = 26.5 bits (59), Expect = 0.86
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
+ C CGK F R L H++
Sbjct: 6 YICQSCGKGFSRPDHLNGHIK 26
Score = 25.0 bits (55), Expect = 2.9
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 217 GKQHECEECSRLFPSSKMLYDHTMRSHKTRVLFKCH 252
GK + C+ C + F L H + H + KC
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 24.6 bits (54), Expect = 3.7
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 112 FKCHQCSRKYMSKPSLRRHIYATH 135
+ C C + + L HI H
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVH 29
Score = 23.4 bits (51), Expect = 9.3
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 56 YTCDICSQDYSTKYYLKLHKQ-VHEG-KQHECE 86
Y C C + +S +L H + VH + H+C+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 28.4 bits (63), Expect = 0.24
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 136 INKGVRFSCHLCGKSFHREQSLRKH 160
+ + C LCGK F LR+H
Sbjct: 1 LREAGILPCGLCGKVFTDANRLRQH 25
Score = 28.4 bits (63), Expect = 0.24
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 273 INKGVRFSCHLCGKSFHREQSLRKH 297
+ + C LCGK F LR+H
Sbjct: 1 LREAGILPCGLCGKVFTDANRLRQH 25
Score = 28.4 bits (63), Expect = 0.27
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTH 50
PC CGK+F L++H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
Score = 25.7 bits (56), Expect = 2.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 439 YPCTICPREFQNKANLNHHLASH 461
PC +C + F + L H A H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.4 bits (61), Expect = 0.38
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 218 KQHECEECSRLFPSSKMLYDHTMRSHK 244
+ + C C R F S++ L H M H+
Sbjct: 4 RSYTCSFCKREFRSAQALGGH-MNVHR 29
Score = 26.6 bits (59), Expect = 0.70
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 81 KQHECEKCPRLFPSSKMLYDHTMRSHK 107
+ + C C R F S++ L H M H+
Sbjct: 4 RSYTCSFCKREFRSAQALGGH-MNVHR 29
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 30.2 bits (68), Expect = 0.47
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 410 VYQCYHCLKIFKRKKDLPRHIMSVHMR 436
++ C +CLK K +K H+ R
Sbjct: 31 LWLCEYCLKYMKYEKSYRFHLGQCQWR 57
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.7 bits (62), Expect = 0.54
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 219 QHECEECSRLFPSSKMLYDHTMRS--HKTRV 247
H C C+R F S L H RS HK R+
Sbjct: 15 LHRCLACARYFIDSTNLKTH-FRSKDHKKRL 44
Score = 25.0 bits (55), Expect = 5.3
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 20 YDKPKQVEFPCVYCGKIFPRLGLLKEHTKT 49
D P C+ C + F LK H ++
Sbjct: 8 PDLPGGGLHRCLACARYFIDSTNLKTHFRS 37
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 29.8 bits (67), Expect = 0.81
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 410 VYQCYHCLKIFKRKKDLPRHIMSVHMR 436
+Y L+ F KK R+ +R
Sbjct: 34 IYIDDFTLQYFGSKKQYERYRKKCTLR 60
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus
thermophilus [TaxId: 274]}
Length = 394
Score = 29.6 bits (66), Expect = 0.86
Identities = 20/218 (9%), Positives = 55/218 (25%), Gaps = 21/218 (9%)
Query: 17 EQHYDKPKQVEFPCVYCGKIFPRLGLLKEHTKTHHLKVRYTCDICSQDYST--KYYLKLH 74
H K + LLKE + ++ ++ ++ + ++
Sbjct: 77 SGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAP 136
Query: 75 KQVHEGKQHECEKCPRLFPSSKMLYD--HTMRSHKTRELFKCHQCSRKYMSKPSLRRHIY 132
++ P + + + + Y+ +P + I+
Sbjct: 137 ERAGGAMTAAGVLDPA-SGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYL-RPETAQGIF 194
Query: 133 ATHIN------KGVRFSCHLCGKSFHREQSLRKHLREEENQDQLHCDKCRYKTFLKSNLI 186
N + + F GK+F E + R + + + ++ +
Sbjct: 195 VNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIF---------RVREFEQMEIEYFVR 245
Query: 187 AHVHGKRFCDICSQDYSTKYYLKLHKQVHEGKQHECEE 224
+ + L ++ Q E
Sbjct: 246 PGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPES 283
>d1v54f_ g.41.5.3 (F:) Cytochrome c oxidase Subunit F {Cow (Bos
taurus) [TaxId: 9913]}
Length = 98
Score = 27.8 bits (62), Expect = 0.92
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 197 ICSQDYSTKYYLKLHKQVHEGKQHECEECSRLF 229
IC +D ST + LHK G+ C C +
Sbjct: 61 ICEEDNSTVIWFWLHK----GEAQRCPSCGTHY 89
Score = 26.2 bits (58), Expect = 4.0
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 55 RYTCDICSQDYSTKYYLKLHKQVHEGKQHECEKC 88
R IC +D ST + LHK G+ C C
Sbjct: 56 RIVGCICEEDNSTVIWFWLHK----GEAQRCPSC 85
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 25.7 bits (57), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
+ C CGK+F R L +H R
Sbjct: 8 YGCVECGKAFSRSSILVQHQR 28
Score = 25.7 bits (57), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
+ C CGK+F R L +H R
Sbjct: 8 YGCVECGKAFSRSSILVQHQR 28
Score = 25.3 bits (56), Expect = 2.3
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 461 HAG-KTYECENCSKIFNSKRKLYSHKR 486
H+G K Y C C K F+ L H+R
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR 28
Score = 24.5 bits (54), Expect = 3.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTH 50
+ CV CGK F R +L +H + H
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVH 30
Score = 23.7 bits (52), Expect = 6.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 56 YTCDICSQDYSTKYYLKLHKQVHEG 80
Y C C + +S L H++VH G
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 25.7 bits (57), Expect = 1.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
F C +C ++F R++ L++H R
Sbjct: 3 FVCEVCTRAFARQEHLKRHYR 23
Score = 25.7 bits (57), Expect = 1.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
F C +C ++F R++ L++H R
Sbjct: 3 FVCEVCTRAFARQEHLKRHYR 23
Score = 24.9 bits (55), Expect = 2.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTH 50
F C C + F R LK H ++H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH 25
Score = 24.1 bits (53), Expect = 5.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 464 KTYECENCSKIFNSKRKLYSHKR 486
+++ CE C++ F + L H R
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 25.3 bits (56), Expect = 1.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
F C +C ++F R L H+R
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR 24
Score = 25.3 bits (56), Expect = 1.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
F C +C ++F R L H+R
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR 24
Score = 24.9 bits (55), Expect = 2.3
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 464 KTYECENCSKIFNSKRKLYSHKR 486
K ++C C + F+ L +H R
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR 24
Score = 23.7 bits (52), Expect = 5.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTH 50
F C C + F R L H +TH
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTH 26
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 25.4 bits (56), Expect = 1.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTHH 51
+ C +C K F + LL H K +H
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYH 32
Score = 24.2 bits (53), Expect = 4.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 464 KTYECENCSKIFNSKRKLYSHKRKDH 489
K Y C +C K F K+ L H ++ H
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 24.2 bits (53), Expect = 4.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
++C C K+F ++Q L H +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFK 29
Score = 24.2 bits (53), Expect = 4.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
++C C K+F ++Q L H +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFK 29
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 25.3 bits (56), Expect = 1.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 411 YQCYHCLKIFKRKKDLPRHIMSVH 434
Y+CY C F + + HI+ H
Sbjct: 9 YECYICHARFTQSGTMKMHILQKH 32
Score = 24.9 bits (55), Expect = 2.6
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 104 RSHKTRELFKCHQCSRKYMSKPSLRRHIYATH 135
R+H + ++C+ C ++ +++ HI H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 24.9 bits (55), Expect = 3.2
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 28 FPCVYCGKIFPRLGLLKEHTKTHH 51
+ C C F + G +K H H
Sbjct: 9 YECYICHARFTQSGTMKMHILQKH 32
Score = 24.6 bits (54), Expect = 3.5
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 464 KTYECENCSKIFNSKRKLYSHKRKDH 489
K YEC C F + H + H
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKH 32
Score = 24.2 bits (53), Expect = 5.2
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
+ C++C F + +++ H+
Sbjct: 9 YECYICHARFTQSGTMKMHIL 29
Score = 24.2 bits (53), Expect = 5.2
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
+ C++C F + +++ H+
Sbjct: 9 YECYICHARFTQSGTMKMHIL 29
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 24.5 bits (54), Expect = 3.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 464 KTYECENCSKIFNSKRKLYSHKR 486
K Y+C C K F+ L +H+R
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQR 23
Score = 23.3 bits (51), Expect = 9.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
+ C CGK+F + L H R
Sbjct: 3 YKCLECGKAFSQNSGLINHQR 23
Score = 23.3 bits (51), Expect = 9.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
+ C CGK+F + L H R
Sbjct: 3 YKCLECGKAFSQNSGLINHQR 23
>d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase
8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 348
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 6/146 (4%)
Query: 372 DETKFHQESLNVSTKQSCQFLLEHLSLKNNITGTQQCEVYQCYHCLKIFKRKKDLPRHIM 431
+E H + + + + S+ + Q QC C K + + +
Sbjct: 134 EENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSL 193
Query: 432 SVHMRIKYPCTICPREFQNKANLNHHLASHAGKTYECENCSKIFNSKRKLYSHKRKDHMG 491
+ K C R F + L + + C +C +S +K+ K +
Sbjct: 194 PLASTSKCTLQDCLRLFSKEEKLTDN------NRFYCSHCRARRDSLKKIEIWKLPPVLL 247
Query: 492 LTYSCFMCNKTITSKNSLRDHIHLFH 517
+ F + K L +
Sbjct: 248 VHLKRFSYDGRWKQKLQTSVDFPLEN 273
>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 446
Score = 27.6 bits (60), Expect = 4.2
Identities = 13/113 (11%), Positives = 29/113 (25%)
Query: 40 LGLLKEHTKTHHLKVRYTCDICSQDYSTKYYLKLHKQVHEGKQHECEKCPRLFPSSKMLY 99
LG++ ++ + + + +V + +
Sbjct: 103 LGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYL 162
Query: 100 DHTMRSHKTRELFKCHQCSRKYMSKPSLRRHIYATHINKGVRFSCHLCGKSFH 152
+T EL K Y ++ + + A + L GKS
Sbjct: 163 VVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPC 215
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 27.5 bits (61), Expect = 4.4
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 410 VYQCYHCLKIFKRKKDLPRHIMSVHMR 436
+Y C CLK K + L +H+
Sbjct: 31 LYLCEFCLKYMKSRTILQQHMKKCGWF 57
>d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 153
Score = 26.5 bits (58), Expect = 4.6
Identities = 8/79 (10%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Query: 204 TKYYLKLHKQVHEGKQHECEECSRLFPSSKMLYDHTMRSHKTRVLFKCHQCSRKYMSKPS 263
+ + H + H K + ++ + V+ K + + P
Sbjct: 42 DRELAEKHYEEHREKPFFKALIDY-ITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPG 100
Query: 264 LRRHIYANHINKGVRFSCH 282
R + ++ + H
Sbjct: 101 TIRGDFGLEVSDAICNVIH 119
Score = 26.5 bits (58), Expect = 5.8
Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Query: 67 TKYYLKLHKQVHEGKQHECEKCPRLFPSSKMLYDHTMRSHKTRELFKCHQCSRKYMSKPS 126
+ + H + H K + + ++ + + K + + P
Sbjct: 42 DRELAEKHYEEHREKPF-FKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPG 100
Query: 127 LRRHIYATHINKGVRFSCH 145
R + ++ + H
Sbjct: 101 TIRGDFGLEVSDAICNVIH 119
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 23.9 bits (51), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 58 CDICSQDYSTKYYLKLHKQVHEGKQ 82
C C + + +KYYLK+H + H G++
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 23.9 bits (51), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 195 CDICSQDYSTKYYLKLHKQVHEGKQ 219
C C + + +KYYLK+H + H G++
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.9 bits (51), Expect = 6.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 411 YQCYHCLKIFKRKKDLPRHIMSVH 434
+ C HC + RK DL H+ H
Sbjct: 3 FHCPHCDTVIARKSDLGVHLRKQH 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 23.8 bits (52), Expect = 6.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 142 FSCHLCGKSFHREQSLRKHLR 162
F+C C K F R L KH++
Sbjct: 3 FACPECPKRFMRSDHLSKHIK 23
Score = 23.8 bits (52), Expect = 6.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 279 FSCHLCGKSFHREQSLRKHLR 299
F+C C K F R L KH++
Sbjct: 3 FACPECPKRFMRSDHLSKHIK 23
Score = 23.5 bits (51), Expect = 9.7
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 464 KTYECENCSKIFNSKRKLYSHKR 486
K + C C K F L H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK 23
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 24.0 bits (52), Expect = 7.0
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 46 HTKTHHLKVRYTCDICSQDYSTKYYLKLHKQVHEG 80
+ RY CD C + +S L H++ H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 26.5 bits (57), Expect = 7.1
Identities = 5/58 (8%), Positives = 12/58 (20%)
Query: 411 YQCYHCLKIFKRKKDLPRHIMSVHMRIKYPCTICPREFQNKANLNHHLASHAGKTYEC 468
+ C HC L + + K + + + +
Sbjct: 28 FYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKM 85
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 23.9 bits (52), Expect = 7.7
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 29 PCVYCGKIFPRLGLLKEHTKTHHLKVRYTCD 59
P CGK F LKEH K H Y C+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 23.5 bits (51), Expect = 8.1
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 46 HTKTHHLKVRYTCDICSQDYSTKYYLKLHKQVH 78
T+ + C C + +S +L LH++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.5 bits (50), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 439 YPCTICPREFQNKANLNHHL 458
YPC C +EF K N+ H+
Sbjct: 2 YPCPFCFKEFTRKDNMTAHV 21
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.135 0.433
Gapped
Lambda K H
0.267 0.0611 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,016,205
Number of extensions: 100192
Number of successful extensions: 977
Number of sequences better than 10.0: 1
Number of HSP's gapped: 960
Number of HSP's successfully gapped: 318
Length of query: 526
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 437
Effective length of database: 1,185,626
Effective search space: 518118562
Effective search space used: 518118562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.2 bits)