Query psy13517
Match_columns 209
No_of_seqs 122 out of 783
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:23:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13517.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13517hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjm_A Glycosyl transferase, g 92.1 1.4 4.7E-05 37.6 10.8 89 81-196 296-384 (394)
2 3okp_A GDP-mannose-dependent a 89.9 2 6.9E-05 36.0 9.7 87 82-196 292-378 (394)
3 3oy2_A Glycosyltransferase B73 88.2 2.5 8.5E-05 36.1 9.2 47 149-196 343-389 (413)
4 3c48_A Predicted glycosyltrans 87.7 3.4 0.00012 35.4 9.8 91 81-199 337-427 (438)
5 2x6q_A Trehalose-synthase TRET 87.7 2.3 8E-05 36.4 8.7 86 81-195 327-412 (416)
6 2iw1_A Lipopolysaccharide core 86.6 0.97 3.3E-05 37.8 5.5 48 149-197 324-371 (374)
7 3qhp_A Type 1 capsular polysac 85.0 4.4 0.00015 29.9 8.0 46 135-184 116-161 (166)
8 2r60_A Glycosyl transferase, g 83.9 6.4 0.00022 34.7 9.8 50 149-198 411-460 (499)
9 2gek_A Phosphatidylinositol ma 83.7 2.9 9.7E-05 35.3 7.2 104 69-205 281-388 (406)
10 2bfw_A GLGA glycogen synthase; 82.1 4.7 0.00016 30.6 7.3 71 81-179 127-198 (200)
11 3fro_A GLGA glycogen synthase; 71.9 12 0.00042 31.5 7.7 50 149-202 382-432 (439)
12 3s28_A Sucrose synthase 1; gly 66.9 27 0.00091 34.1 9.6 90 82-198 677-770 (816)
13 1rzu_A Glycogen synthase 1; gl 42.2 1E+02 0.0035 26.5 8.5 52 149-206 427-481 (485)
14 2f9f_A First mannosyl transfer 42.2 27 0.00092 26.1 4.1 67 81-175 109-176 (177)
15 2qzs_A Glycogen synthase; glyc 40.8 1.1E+02 0.0039 26.2 8.5 42 149-193 428-472 (485)
16 1hnr_A H-NS; histone-like prot 38.2 10 0.00035 23.8 0.8 18 69-87 5-24 (47)
17 2auh_B Growth factor receptor- 36.6 17 0.00059 23.9 1.8 20 160-179 29-49 (59)
18 2vsy_A XCC0866; transferase, g 33.8 55 0.0019 29.0 5.4 47 149-195 509-557 (568)
19 3otg_A CALG1; calicheamicin, T 31.9 38 0.0013 28.5 3.8 45 149-194 363-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 28.6 75 0.0026 26.9 5.1 33 145-177 307-339 (365)
21 2jq3_A Apolipoprotein C-III; A 28.6 41 0.0014 23.1 2.7 39 168-208 34-72 (79)
22 1f0k_A MURG, UDP-N-acetylgluco 24.7 38 0.0013 27.9 2.4 46 149-200 312-357 (364)
23 2iuy_A Avigt4, glycosyltransfe 21.0 1.8E+02 0.0063 23.4 6.0 41 149-197 295-335 (342)
No 1
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=92.05 E-value=1.4 Score=37.56 Aligned_cols=89 Identities=8% Similarity=0.095 Sum_probs=62.0
Q ss_pred ccccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc
Q psy13517 81 AASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM 160 (209)
Q Consensus 81 ~~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~ 160 (209)
+++.-+.-.|+||-.|+..+..-. .+.+..+..-+-+..+ ..++|.++|..+.
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~~~--------------------------~e~v~~~~~g~~~~~~-d~~~la~~i~~l~ 348 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVGGI--------------------------PEVIQHGDTGYLCEVG-DTTGVADQAIQLL 348 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCTTS--------------------------TTTCCBTTTEEEECTT-CHHHHHHHHHHHH
T ss_pred CCchHHHHHHhcCCCEEEecCCCh--------------------------HHHhhcCCceEEeCCC-CHHHHHHHHHHHH
Confidence 445556677888888887653210 2333444333444432 2569999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q psy13517 161 HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSK 196 (209)
Q Consensus 161 ~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~e 196 (209)
++++..++++++|++++.+..+.+.+..-+..++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 349 KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999998889988877666655554
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=89.88 E-value=2 Score=36.02 Aligned_cols=87 Identities=9% Similarity=0.063 Sum_probs=59.7
Q ss_pred cccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhcc
Q psy13517 82 ASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFMH 161 (209)
Q Consensus 82 ~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~~ 161 (209)
++..+.--|+||-.|+..+..-. .+.+..+ .=+-+..+ +.++|.++|..+.+
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~~~--------------------------~e~i~~~-~g~~~~~~-d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSGGA--------------------------PETVTPA-TGLVVEGS-DVDKLSELLIELLD 343 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSSTTG--------------------------GGGCCTT-TEEECCTT-CHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHcCCCEEEeCCCCh--------------------------HHHHhcC-CceEeCCC-CHHHHHHHHHHHHh
Confidence 34456667888888887653211 2233444 33334432 26699999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q psy13517 162 HDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSK 196 (209)
Q Consensus 162 ~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~e 196 (209)
+++..++++++|++++.+.++.+.+..-+..++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 344 DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999999988887766555555443
No 3
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=88.19 E-value=2.5 Score=36.11 Aligned_cols=47 Identities=9% Similarity=0.189 Sum_probs=39.1
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSK 196 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~e 196 (209)
.++|.++| .+.++++..++++++|++++.+.++.+.+..-+..++.+
T Consensus 343 ~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 343 VDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp HHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 56999999 999999999999999999998888887766555555443
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=87.72 E-value=3.4 Score=35.43 Aligned_cols=91 Identities=12% Similarity=0.031 Sum_probs=60.6
Q ss_pred ccccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc
Q psy13517 81 AASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM 160 (209)
Q Consensus 81 ~~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~ 160 (209)
+++..+.-.|+||-.|+..+..-. .+.+.++.+-+-+..+ ..++|.++|..+.
T Consensus 337 ~~~~~~~Eama~G~PvI~~~~~~~--------------------------~e~i~~~~~g~~~~~~-d~~~la~~i~~l~ 389 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAARVGGL--------------------------PIAVAEGETGLLVDGH-SPHAWADALATLL 389 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEESCTTH--------------------------HHHSCBTTTEEEESSC-CHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEecCCCCh--------------------------hHHhhCCCcEEECCCC-CHHHHHHHHHHHH
Confidence 344456667888888877653211 1223344333334432 2569999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHh
Q psy13517 161 HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYAA 199 (209)
Q Consensus 161 ~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~ 199 (209)
++++..++++++|++++.+ .+.+.+..-+..++.+..+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~ 427 (438)
T 3c48_A 390 DDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIA 427 (438)
T ss_dssp HCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988 7777766655555555433
No 5
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=87.67 E-value=2.3 Score=36.39 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=58.5
Q ss_pred ccccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc
Q psy13517 81 AASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM 160 (209)
Q Consensus 81 ~~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~ 160 (209)
+++.-+.-.|+||-.|+..+..-. .+.+..+..-+-+. | .++|.++|..+.
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~--------------------------~e~i~~~~~g~l~~-d--~~~la~~i~~ll 377 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGI--------------------------KFQIVDGETGFLVR-D--ANEAVEVVLYLL 377 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHH--------------------------HHHCCBTTTEEEES-S--HHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCEEEccCCCC--------------------------hhheecCCCeEEEC-C--HHHHHHHHHHHH
Confidence 344556677888888888763211 11122332223233 5 569999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHH
Q psy13517 161 HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLS 195 (209)
Q Consensus 161 ~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~ 195 (209)
++++..++++++|++++.+.++.+.+..-+..++.
T Consensus 378 ~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 378 KHPEVSKEMGAKAKERVRKNFIITKHMERYLDILN 412 (416)
T ss_dssp HCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999999999999999888887776655554443
No 6
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=86.63 E-value=0.97 Score=37.82 Aligned_cols=48 Identities=4% Similarity=0.103 Sum_probs=40.5
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKY 197 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~ey 197 (209)
.++|.++|..+.++++..++++++|++++.++ +......-+.+++.+|
T Consensus 324 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 324 QEQLNEVLRKALTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIITGG 371 (374)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999999887 7777776677666543
No 7
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=84.99 E-value=4.4 Score=29.85 Aligned_cols=46 Identities=2% Similarity=0.100 Sum_probs=33.9
Q ss_pred CCcceEEEecCCCChhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChh
Q psy13517 135 KPWVHYVPVNKHASKQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMK 184 (209)
Q Consensus 135 ~P~~HyVpv~~d~s~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~ 184 (209)
.....+++. .| .+++.++|..+.++++..+++++++++++.+ .+.+
T Consensus 116 ~~~~~~~~~-~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~ 161 (166)
T 3qhp_A 116 LDERSLFEP-NN--AKDLSAKIDWWLENKLERERMQNEYAKSALN-YTLE 161 (166)
T ss_dssp SSGGGEECT-TC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HC--
T ss_pred cCCceEEcC-CC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-CChh
Confidence 444444443 33 5699999999999999999999999998844 4444
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=83.94 E-value=6.4 Score=34.70 Aligned_cols=50 Identities=10% Similarity=0.116 Sum_probs=42.3
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYA 198 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya 198 (209)
.++|.++|..+.++++..++++++|++++.+.++.+.+..-+..++.+..
T Consensus 411 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 411 PEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999998898887766666665543
No 9
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=83.71 E-value=2.9 Score=35.32 Aligned_cols=104 Identities=9% Similarity=-0.043 Sum_probs=68.6
Q ss_pred hcceeEEee--CCcccccchHHHhcCCceEEeeccc-hhhhhhccccccccccccccccchhhhccCCCCCcceEEEec-
Q psy13517 69 CKYKYLFNF--RGVAASFRFKHLFLCKSLVFHVGDE-WIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVN- 144 (209)
Q Consensus 69 ~~yKyll~~--dG~~~S~Rl~~ll~~~Svvl~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~- 144 (209)
.....+|.. .+.+++..+.--|+||-.|+..+.. ..+.. ..+.+-+-+.
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i---------------------------~~~~~g~~~~~ 333 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVL---------------------------ADGDAGRLVPV 333 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHH---------------------------TTTTSSEECCT
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHh---------------------------cCCCceEEeCC
Confidence 445555544 2445566677788999988887642 22222 2222223333
Q ss_pred CCCChhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhcCCCC
Q psy13517 145 KHASKQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYAALLKYKP 205 (209)
Q Consensus 145 ~d~s~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~l~~~~p 205 (209)
.| .++|.++|..+.++++..++++++|++++. ..+.+.+..-+..++. +++.-.+
T Consensus 334 ~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~---~~~~~~~ 388 (406)
T 2gek_A 334 DD--ADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYE---TVSGAGI 388 (406)
T ss_dssp TC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHH---HHCCTTC
T ss_pred CC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH---HHHhhcc
Confidence 33 569999999999999999999999999988 7787776655555544 4454443
No 10
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=82.07 E-value=4.7 Score=30.58 Aligned_cols=71 Identities=6% Similarity=-0.083 Sum_probs=48.4
Q ss_pred ccccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc
Q psy13517 81 AASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM 160 (209)
Q Consensus 81 ~~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~ 160 (209)
+++..+.--|+||..|+..+.....- .+ .+.+-+-+..+ +.+++.++|..+.
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~~~~~e--------------------------~~-~~~~g~~~~~~-~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAVGGLRD--------------------------II-TNETGILVKAG-DPGELANAILKAL 178 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESCHHHHH--------------------------HC-CTTTCEEECTT-CHHHHHHHHHHHH
T ss_pred CccHHHHHHHHCCCCEEEeCCCChHH--------------------------Hc-CCCceEEecCC-CHHHHHHHHHHHH
Confidence 34555667788888888876432111 12 22222334332 2569999999999
Q ss_pred c-CHHHHHHHHHHHHHHHHH
Q psy13517 161 H-HDDVAEKIATRGYEFVMK 179 (209)
Q Consensus 161 ~-~~~~a~~IA~~~~~~a~~ 179 (209)
+ +++..++++++|++++.+
T Consensus 179 ~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 179 ELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHh
Confidence 9 999999999999998877
No 11
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=71.92 E-value=12 Score=31.48 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=38.3
Q ss_pred hhhHHHHHHHhcc-CHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhcC
Q psy13517 149 KQEIRDMLHFFMH-HDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYAALLK 202 (209)
Q Consensus 149 ~~dL~~~i~~~~~-~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~l~~ 202 (209)
.+++.++|..+.+ +++..++++++|++++. ..+.+.+. .+++.-|.++++
T Consensus 382 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~-~~s~~~~~---~~~~~~~~~~~~ 432 (439)
T 3fro_A 382 PGELANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSA---ERYVKAYTGSID 432 (439)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH-TSCHHHHH---HHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh-hCcHHHHH---HHHHHHHHHHHH
Confidence 5699999999988 89999999999999994 48876654 444444555543
No 12
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=66.86 E-value=27 Score=34.10 Aligned_cols=90 Identities=11% Similarity=0.067 Sum_probs=59.9
Q ss_pred cccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc-
Q psy13517 82 ASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM- 160 (209)
Q Consensus 82 ~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~- 160 (209)
++.-+.--|+||..|+..+..-. .+.+..+.+=+-+..+ ..+++.++|..+.
T Consensus 677 fglvllEAMA~G~PVIasd~GG~--------------------------~EiV~dg~~Gllv~p~-D~e~LA~aI~~lL~ 729 (816)
T 3s28_A 677 FGLTVVEAMTCGLPTFATCKGGP--------------------------AEIIVHGKSGFHIDPY-HGDQAADTLADFFT 729 (816)
T ss_dssp SCHHHHHHHHTTCCEEEESSBTH--------------------------HHHCCBTTTBEEECTT-SHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHcCCCEEEeCCCCh--------------------------HHHHccCCcEEEeCCC-CHHHHHHHHHHHHH
Confidence 33445566788887777653211 1223344443444442 2568889886654
Q ss_pred ---cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHH
Q psy13517 161 ---HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYA 198 (209)
Q Consensus 161 ---~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya 198 (209)
.+++..++++++|++.+.+..+.+.+..-+..+...|.
T Consensus 730 ~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 730 KCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999888998887766666665553
No 13
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=42.21 E-value=1e+02 Score=26.47 Aligned_cols=52 Identities=8% Similarity=0.176 Sum_probs=36.1
Q ss_pred hhhHHHHHHHhc---cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhcCCCCc
Q psy13517 149 KQEIRDMLHFFM---HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYAALLKYKPR 206 (209)
Q Consensus 149 ~~dL~~~i~~~~---~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~l~~~~p~ 206 (209)
.++|.++|..+. ++++..++++++|++ +.++.+. ...+++.-|.++..-++.
T Consensus 427 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~---~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 427 LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEK---SAGLYAALYSQLISKGHH 481 (485)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHH---HHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHH---HHHHHHHHHHHhhCCCCC
Confidence 569999999998 799999999999874 4555554 445556666677665554
No 14
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=42.17 E-value=27 Score=26.06 Aligned_cols=67 Identities=15% Similarity=0.012 Sum_probs=39.7
Q ss_pred ccccchHHHhcCCceEEeeccchhhhhhccccccccccccccccchhhhccCCCCCcceEEEecCCCChhhHHHHHHHhc
Q psy13517 81 AASFRFKHLFLCKSLVFHVGDEWIEFFYPAMKPWVSHLKNIARDEWIEFFYPAMKPWVHYVPVNKHASKQEIRDMLHFFM 160 (209)
Q Consensus 81 ~~S~Rl~~ll~~~Svvl~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~P~~HyVpv~~d~s~~dL~~~i~~~~ 160 (209)
+++.-+.--|+||..|+..+.... .+.+..+..=+-+..| .+++.++|..+.
T Consensus 109 ~~~~~~~Eama~G~PvI~~~~~~~--------------------------~e~i~~~~~g~~~~~d--~~~l~~~i~~l~ 160 (177)
T 2f9f_A 109 DFGLTPIEAMASGKPVIAVNEGGF--------------------------KETVINEKTGYLVNAD--VNEIIDAMKKVS 160 (177)
T ss_dssp CSCHHHHHHHHTTCCEEEESSHHH--------------------------HHHCCBTTTEEEECSC--HHHHHHHHHHHH
T ss_pred CCChHHHHHHHcCCcEEEeCCCCH--------------------------HHHhcCCCccEEeCCC--HHHHHHHHHHHH
Confidence 344456667888888887763321 1112223222223444 569999999999
Q ss_pred cCHHH-HHHHHHHHHH
Q psy13517 161 HHDDV-AEKIATRGYE 175 (209)
Q Consensus 161 ~~~~~-a~~IA~~~~~ 175 (209)
++++. .+++.+++++
T Consensus 161 ~~~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 161 KNPDKFKKDCFRRAKE 176 (177)
T ss_dssp HCTTTTHHHHHHHHHT
T ss_pred hCHHHHHHHHHHHHhc
Confidence 88875 5556555544
No 15
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=40.83 E-value=1.1e+02 Score=26.19 Aligned_cols=42 Identities=2% Similarity=0.038 Sum_probs=31.6
Q ss_pred hhhHHHHHHHhc---cCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHH
Q psy13517 149 KQEIRDMLHFFM---HHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVL 193 (209)
Q Consensus 149 ~~dL~~~i~~~~---~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~l 193 (209)
.++|.++|..+. ++++..++++++|++ +.++.+.+..-+..+
T Consensus 428 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~l 472 (485)
T 2qzs_A 428 AWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYREL 472 (485)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHH
Confidence 569999999988 799999999999874 566766654444333
No 16
>1hnr_A H-NS; histone-like protein H1, DNA-binding protein; NMR {Escherichia coli} SCOP: a.155.1.1 PDB: 1hns_A
Probab=38.19 E-value=10 Score=23.83 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=13.1
Q ss_pred hcceeEEeeCCc--ccccchH
Q psy13517 69 CKYKYLFNFRGV--AASFRFK 87 (209)
Q Consensus 69 ~~yKyll~~dG~--~~S~Rl~ 87 (209)
.+|+| ++.+|. +||||-+
T Consensus 5 ~KYry-~dp~G~~~TWtGrGr 24 (47)
T 1hnr_A 5 AKYSY-VDENGETKTWTGQGR 24 (47)
T ss_dssp CCBEE-CCSSCCCEECCTTSS
T ss_pred Cceee-cCCCCCcccccCCCC
Confidence 36777 456698 9999754
No 17
>2auh_B Growth factor receptor-bound protein 14; tyrosine kinase, BPS region, transferase/signaling protein complex; HET: PTR; 3.20A {Homo sapiens}
Probab=36.63 E-value=17 Score=23.85 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=16.2
Q ss_pred ccCHHHHHHHH-HHHHHHHHH
Q psy13517 160 MHHDDVAEKIA-TRGYEFVMK 179 (209)
Q Consensus 160 ~~~~~~a~~IA-~~~~~~a~~ 179 (209)
.+||.+|+.|| +.|+.|.++
T Consensus 29 IenP~Ea~s~a~eeg~~Wrkr 49 (59)
T 2auh_B 29 IENPTEALSVAVEEGLAWRKK 49 (59)
T ss_dssp CCCHHHHHHHHHHHHHHHHCC
T ss_pred ecChHHHHHHHHHhhhhhccc
Confidence 46999999999 777778654
No 18
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=33.78 E-value=55 Score=29.00 Aligned_cols=47 Identities=9% Similarity=0.013 Sum_probs=37.4
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHH--HHhcChhhHHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFV--MKNLKMKHVTQYWEVLLS 195 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a--~~~ls~~~~~~Y~~~ll~ 195 (209)
.+++.++|..+.++++..+++.+++++.+ .+.++.+.+..-+..++.
T Consensus 509 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 509 DAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 56999999999999999999999999987 566777766555444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.95 E-value=38 Score=28.49 Aligned_cols=45 Identities=4% Similarity=-0.000 Sum_probs=35.9
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLL 194 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll 194 (209)
.++|.++|..+.++|+..+++++++++++... +.+.+...+..++
T Consensus 363 ~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEESYRAGARAVAAEIAAMP-GPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSC-CHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHh
Confidence 56999999999999999999999999988765 6555555555544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=28.61 E-value=75 Score=26.94 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=28.2
Q ss_pred CCCChhhHHHHHHHhccCHHHHHHHHHHHHHHH
Q psy13517 145 KHASKQEIRDMLHFFMHHDDVAEKIATRGYEFV 177 (209)
Q Consensus 145 ~d~s~~dL~~~i~~~~~~~~~a~~IA~~~~~~a 177 (209)
.+++.++|.++|..+.+||+..+++++++++++
T Consensus 307 ~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 307 KSTGAAELAAQLSEVLMHPETLRSMADQARSLA 339 (365)
T ss_dssp TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC
Confidence 445567899999999999999999999998754
No 21
>2jq3_A Apolipoprotein C-III; APOCIII, structure, dynamics, receptor, lipid binding protein; NMR {Homo sapiens}
Probab=28.58 E-value=41 Score=23.13 Aligned_cols=39 Identities=15% Similarity=0.546 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhcCCCCccC
Q psy13517 168 KIATRGYEFVMKNLKMKHVTQYWEVLLSKYAALLKYKPRLQ 208 (209)
Q Consensus 168 ~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~l~~~~p~~~ 208 (209)
+||++|+.|...-++ ....||-.+-..+..+.+..|..+
T Consensus 34 qVA~~AR~Wmtd~~s--SLkdYWSt~~gKfsgfwds~pe~~ 72 (79)
T 2jq3_A 34 QVAQQARGWVTDGFS--SLKDYWSTVKDKFSEFWDLDPEVR 72 (79)
T ss_dssp GGHHHHHHHTTTTTT--HHHHHHHHHHHHTTGGGSCSSCCC
T ss_pred HHHHHHHHHHhcchH--HHHHHHHHHhhhhhhhhhcCCCCC
Confidence 589999999876665 577899999999999999888753
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=24.68 E-value=38 Score=27.87 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=32.1
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHhh
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKYAAL 200 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~eya~l 200 (209)
.++|.++|..+ +++..++++++|++++.+ -+......+++.-|.+.
T Consensus 312 ~~~la~~i~~l--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 312 VDAVANTLAGW--SRETLLTMAERARAASIP----DATERVANEVSRVARAL 357 (364)
T ss_dssp HHHHHHHHHTC--CHHHHHHHHHHHHHTCCT----THHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHhhcc----CHHHHHHHHHHHHHHHH
Confidence 56899999999 899999999999886542 23333444455555543
No 23
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.96 E-value=1.8e+02 Score=23.41 Aligned_cols=41 Identities=7% Similarity=-0.003 Sum_probs=29.7
Q ss_pred hhhHHHHHHHhccCHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHH
Q psy13517 149 KQEIRDMLHFFMHHDDVAEKIATRGYEFVMKNLKMKHVTQYWEVLLSKY 197 (209)
Q Consensus 149 ~~dL~~~i~~~~~~~~~a~~IA~~~~~~a~~~ls~~~~~~Y~~~ll~ey 197 (209)
.++|.++|..+.+ ++++++++.+.++.+.+..-+..++.+.
T Consensus 295 ~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 335 (342)
T 2iuy_A 295 PDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYVEQYRRL 335 (342)
T ss_dssp HHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 5699999999887 6777887777778777665555555443
Done!