RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1352
         (399 letters)



>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase
           2A regulatory subunit B56-gamma {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 343

 Score =  251 bits (643), Expect = 1e-81
 Identities = 135/214 (63%), Positives = 158/214 (73%), Gaps = 7/214 (3%)

Query: 51  FMNQFRIDLAHLLRHFLRDSRNLLVDFIWACSNSFSS--PFVKSD-----QEFVYETEHF 103
              +F + L  L        R+ L   +      F     +++         F+YETEH 
Sbjct: 130 IDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHH 189

Query: 104 NGVGELLEILGSIINGFALPLKNEHKLFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKD 163
           NG+ ELLEILGSIINGFALPLK EHK+FL+KVLLPLHKVK LS+YH QLAYCVVQFLEKD
Sbjct: 190 NGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKD 249

Query: 164 PTLTEPVVKGLLKYWPRTCSQKEVMFLGEIEEILDVIEPTQFINIQEPLFRQIAKCVSSP 223
            TLTEPVV  LLKYWP+T S KEVMFL E+EEILDVIEP++F+ I EPLFRQ+AKCVSSP
Sbjct: 250 STLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSP 309

Query: 224 HFQVAERALYFWNNEYIMSLMEENNHVVMPIMFP 257
           HFQVAERALY+WNNEYIMSL+ +N   ++PIMFP
Sbjct: 310 HFQVAERALYYWNNEYIMSLISDNAAKILPIMFP 343



 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 22/31 (70%), Positives = 27/31 (87%)

Query: 323 VAERALYFWNNEYIMSLMEENNHVVMPIMFP 353
           VAERALY+WNNEYIMSL+ +N   ++PIMFP
Sbjct: 313 VAERALYYWNNEYIMSLISDNAAKILPIMFP 343


>d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase)
           {Escherichia coli [TaxId: 562]}
          Length = 358

 Score = 29.3 bits (65), Expect = 0.83
 Identities = 12/88 (13%), Positives = 27/88 (30%)

Query: 226 QVAERALYFWNNEYIMSLMEENNHVVMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEM 285
           Q +     F   + + S + +   ++  I          EH+   ++    +  K  +  
Sbjct: 59  QFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPW 118

Query: 286 NSRLFDELTANYKAERQNSPFGHAFSTS 313
              L D    ++ A  +     H    S
Sbjct: 119 IDGLLDAGEKHFAATGKPLFSSHMIDLS 146


>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
           phosphoglycerate mutase, substrate-binding domain
           {Bacillus stearothermophilus [TaxId: 1422]}
          Length = 234

 Score = 28.1 bits (62), Expect = 1.8
 Identities = 9/53 (16%), Positives = 20/53 (37%)

Query: 205 FINIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNHVVMPIMFP 257
           F N +     QI+   ++  F+  +R      + + + L   +  V   + F 
Sbjct: 181 FYNFRPDRAIQISNTFTNEDFREFDRGPKHPKHLFFVCLTHFSETVAGYVAFK 233


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0637    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,496,493
Number of extensions: 69777
Number of successful extensions: 209
Number of sequences better than 10.0: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 6
Length of query: 399
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 312
Effective length of database: 1,213,086
Effective search space: 378482832
Effective search space used: 378482832
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (24.8 bits)