Your job contains 1 sequence.
>psy13520
MANIRRLSDFTARSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYST
QPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVK
LEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGIL
ACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13520
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BWQ3 - symbol:VMP1 "Uncharacterized protein" ... 398 4.9e-37 1
ZFIN|ZDB-GENE-030131-8733 - symbol:vmp1 "vacuole membrane... 398 4.9e-37 1
FB|FBgn0052675 - symbol:Tango5 "Transport and Golgi organ... 393 1.7e-36 1
UNIPROTKB|Q0VCK9 - symbol:VMP1 "Vacuole membrane protein ... 393 1.7e-36 1
UNIPROTKB|F1S226 - symbol:LOC100524644 "Uncharacterized p... 393 1.7e-36 1
MGI|MGI:1923159 - symbol:Vmp1 "vacuole membrane protein 1... 393 1.7e-36 1
UNIPROTKB|B4DED7 - symbol:VMP1 "cDNA FLJ52586, highly sim... 392 2.1e-36 1
UNIPROTKB|B4DGZ7 - symbol:VMP1 "cDNA FLJ50508, highly sim... 392 2.1e-36 1
UNIPROTKB|Q96GC9 - symbol:VMP1 "Vacuole membrane protein ... 392 2.1e-36 1
UNIPROTKB|Q5R9K4 - symbol:VMP1 "Vacuole membrane protein ... 392 2.1e-36 1
RGD|70367 - symbol:Vmp1 "vacuole membrane protein 1" spec... 392 2.1e-36 1
UNIPROTKB|Q68EQ9 - symbol:vmp1 "Vacuole membrane protein ... 391 2.7e-36 1
UNIPROTKB|Q6INE8 - symbol:vmp1 "Vacuole membrane protein ... 391 2.7e-36 1
WB|WBGene00012559 - symbol:epg-3 species:6239 "Caenorhabd... 232 2.6e-32 2
UNIPROTKB|B4DVV9 - symbol:VMP1 "cDNA FLJ50706, highly sim... 342 4.2e-31 1
DICTYBASE|DDB_G0285175 - symbol:vmp1 "vacuole membrane pr... 315 3.1e-28 1
TAIR|locus:2129530 - symbol:KMS1 "AT4G14950" species:3702... 292 8.4e-26 1
TAIR|locus:2207180 - symbol:KMS2 "AT1G05360" species:3702... 275 6.9e-24 1
GENEDB_PFALCIPARUM|PF14_0714 - symbol:PF14_0714 "hypothet... 173 1.6e-12 1
UNIPROTKB|Q8IK92 - symbol:PF14_0714 "Putative uncharacter... 173 1.6e-12 1
>UNIPROTKB|E1BWQ3 [details] [associations]
symbol:VMP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000407 "pre-autophagosomal structure" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0010506 "regulation of
autophagy" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] [GO:0034329 "cell junction assembly" evidence=IEA]
GO:GO:0005783 GO:GO:0010506 GO:GO:0034329 GO:GO:0016337
GO:GO:0000407 CTD:81671 GeneTree:ENSGT00390000007230 OMA:NRMERET
EMBL:AADN02025785 EMBL:AADN02025786 IPI:IPI00586580
RefSeq:XP_415880.1 UniGene:Gga.1722 PRIDE:E1BWQ3
Ensembl:ENSGALT00000008286 GeneID:417635 KEGG:gga:417635
NextBio:20820909 Uniprot:E1BWQ3
Length = 406
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 80/126 (63%), Positives = 90/126 (71%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS
Sbjct: 179 SLWAIISKVRLEACMWGAGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKAV
Sbjct: 239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAV 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>ZFIN|ZDB-GENE-030131-8733 [details] [associations]
symbol:vmp1 "vacuole membrane protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0033116 "endoplasmic reticulum-Golgi
intermediate compartment membrane" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] ZFIN:ZDB-GENE-030131-8733
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0005774
GO:GO:0033116 CTD:81671 eggNOG:NOG321939 HOVERGEN:HBG057290
EMBL:BC066412 IPI:IPI00482029 RefSeq:NP_996943.1 UniGene:Dr.982
GeneID:336789 KEGG:dre:336789 InParanoid:Q6NYY9 OrthoDB:EOG4K0QNM
NextBio:20811904 ArrayExpress:Q6NYY9 Uniprot:Q6NYY9
Length = 406
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 79/126 (62%), Positives = 90/126 (71%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLW+IM+KV+LEA MWGAGTA+GELPPYF++RAAR+S
Sbjct: 179 SLWTIMSKVRLEACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ +V KVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQNMVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>FB|FBgn0052675 [details] [associations]
symbol:Tango5 "Transport and Golgi organization 5"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] GO:GO:0005783
EMBL:AE014298 GO:GO:0009306 GO:GO:0007030
GeneTree:ENSGT00390000007230 UniGene:Dm.17534 GeneID:326232
KEGG:dme:Dmel_CG32675 CTD:326232 FlyBase:FBgn0052675
GenomeRNAi:326232 NextBio:847754 EMBL:BT133079
RefSeq:NP_001162716.1 RefSeq:NP_727444.1 RefSeq:NP_727445.1
EnsemblMetazoa:FBtr0071500 EnsemblMetazoa:FBtr0071501
EnsemblMetazoa:FBtr0300569 UCSC:CG32675-RA InParanoid:Q9W2S1
OMA:IVLWRKP Uniprot:Q9W2S1
Length = 530
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/130 (61%), Positives = 92/130 (70%)
Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXXXXXXXXXXXXXXXXXX-- 166
VP++WSIM+KV+LEA +WGAGTALGELPPYF+++AARLS
Sbjct: 272 VPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRH 331
Query: 167 -------------IETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
+E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 332 QKNLSMMDRGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 391
Query: 214 GKAVIKMSIQ 223
GKAVIKM IQ
Sbjct: 392 GKAVIKMHIQ 401
>UNIPROTKB|Q0VCK9 [details] [associations]
symbol:VMP1 "Vacuole membrane protein 1" species:9913 "Bos
taurus" [GO:0016337 "cell-cell adhesion" evidence=ISS] [GO:0000421
"autophagic vacuole membrane" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0034329 "cell junction
assembly" evidence=ISS] [GO:0010506 "regulation of autophagy"
evidence=ISS] [GO:0033116 "endoplasmic reticulum-Golgi intermediate
compartment membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA]
[GO:0000407 "pre-autophagosomal structure" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0000421 GO:GO:0006914 GO:GO:0010506 GO:GO:0034329
GO:GO:0016337 GO:GO:0000407 GO:GO:0033116 GO:GO:0007566
EMBL:BC120116 IPI:IPI00906567 RefSeq:NP_001068836.1
UniGene:Bt.111400 STRING:Q0VCK9 Ensembl:ENSBTAT00000015439
GeneID:508631 KEGG:bta:508631 CTD:81671 eggNOG:NOG321939
GeneTree:ENSGT00390000007230 HOVERGEN:HBG057290 OMA:NKEQYNG
NextBio:20868610 ArrayExpress:Q0VCK9 Uniprot:Q0VCK9
Length = 406
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>UNIPROTKB|F1S226 [details] [associations]
symbol:LOC100524644 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034329 "cell junction assembly" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0010506
"regulation of autophagy" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0000407 "pre-autophagosomal structure"
evidence=IEA] GO:GO:0005783 GO:GO:0010506 GO:GO:0034329
GO:GO:0016337 GO:GO:0000407 GO:GO:0007566
GeneTree:ENSGT00390000007230 OMA:NKEQYNG EMBL:CU463348
EMBL:CU639474 RefSeq:XP_003131736.2 Ensembl:ENSSSCT00000019232
GeneID:100524644 KEGG:ssc:100524644 Uniprot:F1S226
Length = 406
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAQAAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>MGI|MGI:1923159 [details] [associations]
symbol:Vmp1 "vacuole membrane protein 1" species:10090 "Mus
musculus" [GO:0000407 "pre-autophagosomal structure" evidence=IDA]
[GO:0000421 "autophagic vacuole membrane" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005773 "vacuole"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IDA] [GO:0010506 "regulation of
autophagy" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0034329 "cell junction
assembly" evidence=ISO] MGI:MGI:1923159 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 GO:GO:0000421 GO:GO:0006914 GO:GO:0010506
GO:GO:0034329 GO:GO:0016337 GO:GO:0000407 GO:GO:0033116
GO:GO:0007566 EMBL:AL592222 EMBL:AL604063 CTD:81671
eggNOG:NOG321939 GeneTree:ENSGT00390000007230 HOVERGEN:HBG057290
OMA:NKEQYNG OrthoDB:EOG4K0QNM EMBL:AB047550 EMBL:AB076609
EMBL:AK043091 EMBL:AK077443 EMBL:AK159468 EMBL:BC004013
IPI:IPI00387192 RefSeq:NP_083754.2 UniGene:Mm.390398
ProteinModelPortal:Q99KU0 STRING:Q99KU0 PhosphoSite:Q99KU0
PaxDb:Q99KU0 PRIDE:Q99KU0 Ensembl:ENSMUST00000018315 GeneID:75909
KEGG:mmu:75909 UCSC:uc007ksv.1 InParanoid:Q99KU0 NextBio:344239
Bgee:Q99KU0 CleanEx:MM_TMEM49 Genevestigator:Q99KU0 Uniprot:Q99KU0
Length = 406
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 79/131 (60%), Positives = 91/131 (69%)
Query: 106 ADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XX 152
A+ SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 174 AEGAISLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEH 233
Query: 153 XXXXXXXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATL 212
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATL
Sbjct: 234 AEAAQDFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATL 293
Query: 213 IGKAVIKMSIQ 223
IGKA+IKM IQ
Sbjct: 294 IGKAIIKMHIQ 304
>UNIPROTKB|B4DED7 [details] [associations]
symbol:VMP1 "cDNA FLJ52586, highly similar to Homo sapiens
transmembrane protein 49 (TMEM49), mRNA" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 EMBL:AC004686 HOVERGEN:HBG057290 UniGene:Hs.708260
UniGene:Hs.741175 HGNC:HGNC:29559 ChiTaRS:VMP1 EMBL:AC025858
EMBL:AC040904 EMBL:AC091271 EMBL:AK293578 IPI:IPI01015255
STRING:B4DED7 Ensembl:ENST00000537567 UCSC:uc010woj.2
Uniprot:B4DED7
Length = 272
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 45 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 104
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 105 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 164
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 165 IKMHIQ 170
>UNIPROTKB|B4DGZ7 [details] [associations]
symbol:VMP1 "cDNA FLJ50508, highly similar to Homo sapiens
transmembrane protein 49 (TMEM49), mRNA" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 EMBL:CH471109 EMBL:AC004686 HOVERGEN:HBG057290
UniGene:Hs.708260 UniGene:Hs.741175 HGNC:HGNC:29559 ChiTaRS:VMP1
EMBL:AC025858 EMBL:AC040904 EMBL:AC091271 EMBL:AK294854
IPI:IPI01015169 STRING:B4DGZ7 Ensembl:ENST00000536180
UCSC:uc010woi.2 Uniprot:B4DGZ7
Length = 309
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 82 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 141
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 142 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 201
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 202 IKMHIQ 207
>UNIPROTKB|Q96GC9 [details] [associations]
symbol:VMP1 "Vacuole membrane protein 1" species:9606 "Homo
sapiens" [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0033116 "endoplasmic reticulum-Golgi intermediate
compartment membrane" evidence=IEA] [GO:0034329 "cell junction
assembly" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0010506 "regulation of autophagy" evidence=ISS]
[GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000421 "autophagic vacuole membrane"
evidence=ISS] GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0000421 GO:GO:0006914 GO:GO:0010506 GO:GO:0034329
GO:GO:0016337 GO:GO:0000407 GO:GO:0033116 GO:GO:0007566 CTD:81671
eggNOG:NOG321939 HOVERGEN:HBG057290 OMA:NKEQYNG OrthoDB:EOG4K0QNM
EMBL:AF214006 EMBL:AB047551 EMBL:AL136711 EMBL:CR533521
EMBL:BC009758 EMBL:AF161410 IPI:IPI00792839 RefSeq:NP_112200.2
UniGene:Hs.708260 UniGene:Hs.741175 ProteinModelPortal:Q96GC9
IntAct:Q96GC9 STRING:Q96GC9 PhosphoSite:Q96GC9 DMDM:74731809
PaxDb:Q96GC9 PRIDE:Q96GC9 DNASU:81671 Ensembl:ENST00000262291
GeneID:81671 KEGG:hsa:81671 UCSC:uc002ixu.4 GeneCards:GC17P057785
H-InvDB:HIX0039412 HGNC:HGNC:29559 HPA:HPA030773 MIM:611753
neXtProt:NX_Q96GC9 PharmGKB:PA142670765 InParanoid:Q96GC9
PhylomeDB:Q96GC9 ChiTaRS:VMP1 GenomeRNAi:81671 NextBio:72028
ArrayExpress:Q96GC9 Bgee:Q96GC9 CleanEx:HS_TMEM49
Genevestigator:Q96GC9 Uniprot:Q96GC9
Length = 406
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>UNIPROTKB|Q5R9K4 [details] [associations]
symbol:VMP1 "Vacuole membrane protein 1" species:9601
"Pongo abelii" [GO:0000421 "autophagic vacuole membrane"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0010506 "regulation of autophagy" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0034329 "cell junction
assembly" evidence=ISS] GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0000421 GO:GO:0006914 GO:GO:0010506 GO:GO:0034329
GO:GO:0016337 GO:GO:0000407 GO:GO:0033116 GO:GO:0007566 CTD:81671
GeneTree:ENSGT00390000007230 HOVERGEN:HBG057290 OMA:NKEQYNG
OrthoDB:EOG4K0QNM EMBL:CR859383 RefSeq:NP_001125914.1
UniGene:Pab.19011 PRIDE:Q5R9K4 Ensembl:ENSPPYT00000010283
GeneID:100172847 KEGG:pon:100172847 InParanoid:Q5R9K4
Uniprot:Q5R9K4
Length = 406
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>RGD|70367 [details] [associations]
symbol:Vmp1 "vacuole membrane protein 1" species:10116 "Rattus
norvegicus" [GO:0000407 "pre-autophagosomal structure"
evidence=IEA;ISO] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005783 "endoplasmic reticulum" evidence=ISO;ISS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0010506 "regulation of autophagy" evidence=ISO;IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=ISO;ISS] [GO:0033116 "endoplasmic reticulum-Golgi
intermediate compartment membrane" evidence=IEA] [GO:0034329 "cell
junction assembly" evidence=ISO;ISS] RGD:70367 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 GO:GO:0000421 GO:GO:0006914
GO:GO:0010506 GO:GO:0034329 GO:GO:0016337 GO:GO:0033116 CTD:81671
eggNOG:NOG321939 GeneTree:ENSGT00390000007230 HOVERGEN:HBG057290
OMA:NKEQYNG OrthoDB:EOG4K0QNM EMBL:AF411216 EMBL:BC061721
IPI:IPI00210170 PIR:JC7798 RefSeq:NP_620194.1 UniGene:Rn.109048
PRIDE:Q91ZQ0 Ensembl:ENSRNOT00000005658 GeneID:192129
KEGG:rno:192129 InParanoid:Q91ZQ0 NextBio:622693
Genevestigator:Q91ZQ0 Uniprot:Q91ZQ0
Length = 406
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>UNIPROTKB|Q68EQ9 [details] [associations]
symbol:vmp1 "Vacuole membrane protein 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005783 "endoplasmic reticulum"
evidence=ISS] GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0005774 GO:GO:0033116 CTD:81671 eggNOG:NOG321939
HOVERGEN:HBG057290 EMBL:BC080142 RefSeq:NP_001007877.1
UniGene:Str.11181 STRING:Q68EQ9 GeneID:493262 KEGG:xtr:493262
Xenbase:XB-GENE-1000954 Uniprot:Q68EQ9
Length = 406
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXXXX-------------XXXXX 157
SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS
Sbjct: 179 SLWTIISKVRLEACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGF GILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFATRAKLAVQNLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>UNIPROTKB|Q6INE8 [details] [associations]
symbol:vmp1 "Vacuole membrane protein 1" species:8355
"Xenopus laevis" [GO:0005783 "endoplasmic reticulum" evidence=ISS]
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0005774
GO:GO:0033116 CTD:81671 HOVERGEN:HBG057290 EMBL:BC072335
RefSeq:NP_001085166.1 UniGene:Xl.40640 GeneID:432249
KEGG:xla:432249 Xenbase:XB-GENE-1000959 Uniprot:Q6INE8
Length = 406
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 78/126 (61%), Positives = 89/126 (70%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXXXX-------------XXXXX 157
SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS
Sbjct: 179 SLWTIISKVRLEACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQ 238
Query: 158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
++ LV KVGF GILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFATRAKLTVQNLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298
Query: 218 IKMSIQ 223
IKM IQ
Sbjct: 299 IKMHIQ 304
>WB|WBGene00012559 [details] [associations]
symbol:epg-3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] GO:GO:0016021 GO:GO:0005737 GO:GO:0006914
EMBL:AL032626 eggNOG:NOG321939 GeneTree:ENSGT00390000007230
PIR:T26642 RefSeq:NP_499688.2 ProteinModelPortal:Q9XWU8
PaxDb:Q9XWU8 EnsemblMetazoa:Y37D8A.22 GeneID:176712
KEGG:cel:CELE_Y37D8A.22 UCSC:Y37D8A.22 CTD:176712
WormBase:Y37D8A.22 HOGENOM:HOG000242387 InParanoid:Q9XWU8
OMA:NRMERET NextBio:893692 Uniprot:Q9XWU8
Length = 458
Score = 232 (86.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 167 IETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
+E ++++GF GIL ASIPNPLFDLAGITCGHFL+PFW+FFGATLIGKA++KM +Q
Sbjct: 263 VEHNIHRLGFPGILLFASIPNPLFDLAGITCGHFLVPFWSFFGATLIGKALVKMHVQ 319
Score = 149 (57.5 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 100 ESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLS 147
+ P + + W I+ KV++E+++WGAGTALGELPPYF++RAAR+S
Sbjct: 178 QCPSTKSSIAVTFWQIVAKVRVESLLWGAGTALGELPPYFMARAARIS 225
>UNIPROTKB|B4DVV9 [details] [associations]
symbol:VMP1 "cDNA FLJ50706, highly similar to Homo sapiens
transmembrane protein 49 (TMEM49), mRNA" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000407 "pre-autophagosomal structure" evidence=IEA]
[GO:0000421 "autophagic vacuole membrane" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0010506 "regulation of
autophagy" evidence=IEA] GO:GO:0016021 GO:GO:0010506 GO:GO:0000407
GO:GO:0007566 EMBL:AC004686 HOVERGEN:HBG057290 UniGene:Hs.708260
UniGene:Hs.741175 HGNC:HGNC:29559 ChiTaRS:VMP1 EMBL:AC025858
EMBL:AC040904 EMBL:AC091271 EMBL:AK301254 IPI:IPI01013905
STRING:B4DVV9 Ensembl:ENST00000539763 Uniprot:B4DVV9
Length = 214
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 69/112 (61%), Positives = 76/112 (67%)
Query: 125 MWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXXXXXXXXXXXIETLV 171
MWG GTA+GELPPYF++RAARLS ++ LV
Sbjct: 1 MWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLV 60
Query: 172 NKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+IKM IQ
Sbjct: 61 QKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQ 112
>DICTYBASE|DDB_G0285175 [details] [associations]
symbol:vmp1 "vacuole membrane protein 1"
species:44689 "Dictyostelium discoideum" [GO:0000331 "contractile
vacuole" evidence=IDA] [GO:0033298 "contractile vacuole
organization" evidence=IMP] [GO:0031152 "aggregation involved in
sorocarp development" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0007029 "endoplasmic reticulum organization"
evidence=IMP] [GO:0006971 "hypotonic response" evidence=IMP]
[GO:0006907 "pinocytosis" evidence=IMP] [GO:0006887 "exocytosis"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285175 GO:GO:0016021 GenomeReviews:CM000153_GR
GO:GO:0005789 GO:GO:0008283 EMBL:AAFI02000075 GO:GO:0006887
GO:GO:0006971 GO:GO:0006907 GO:GO:0007030 GO:GO:0031152
GO:GO:0007029 InterPro:IPR015414 Pfam:PF09335 GO:GO:0033298
eggNOG:NOG321939 RefSeq:XP_638348.1 PRIDE:Q54NL4
EnsemblProtists:DDB0234044 GeneID:8624973 KEGG:ddi:DDB_G0285175
OMA:VITLCNN Uniprot:Q54NL4
Length = 403
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 66/129 (51%), Positives = 77/129 (59%)
Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXXXXXXXXXXXXXXX------- 163
S W I+ KV+ A+ WGAGTA+GELPPYF++R ARL
Sbjct: 165 SFWMILQKVQWAALFWGAGTAIGELPPYFVARTARLKGLKLEQEKKLKEQQEKPIDEKDQ 224
Query: 164 ---------XXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIG 214
+ L+ +GFFGILA ASIPNPLFDLAGITCGHFL+PFW FFGAT IG
Sbjct: 225 PKKGLLERLSEKVPALIGNLGFFGILAFASIPNPLFDLAGITCGHFLVPFWKFFGATFIG 284
Query: 215 KAVIKMSIQ 223
KAV+K IQ
Sbjct: 285 KAVVKAHIQ 293
>TAIR|locus:2129530 [details] [associations]
symbol:KMS1 "AT4G14950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR
InterPro:IPR015414 Pfam:PF09335 eggNOG:NOG321939
HOGENOM:HOG000242387 EMBL:BT015780 IPI:IPI00545910
RefSeq:NP_567450.1 UniGene:At.21742 UniGene:At.47941 IntAct:Q5XF36
PaxDb:Q5XF36 PRIDE:Q5XF36 EnsemblPlants:AT4G14950.1 GeneID:827153
KEGG:ath:AT4G14950 TAIR:At4g14950 InParanoid:Q5XF36 OMA:GIPFWEF
PhylomeDB:Q5XF36 ProtClustDB:CLSN2687689 Genevestigator:Q5XF36
Uniprot:Q5XF36
Length = 416
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 74/170 (43%), Positives = 92/170 (54%)
Query: 67 MCESLSVPCAPVD-IEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMM 125
+C + + AP D I+ + S SE A VP L SI+ +V+LEA++
Sbjct: 137 LCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVP-LTSILPQVQLEAIL 195
Query: 126 WGAGTALGELPPYFLSRAARLSXXXXXXXXXXXXXXXXXXX-IETLVNKV---------- 174
WG GTALGELPPYF+SRAA +S + T +N+V
Sbjct: 196 WGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQH 255
Query: 175 -GFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
FF +L AS+PNPLFDLAGI CG F IPFW FF ATLIGKA+IK IQ
Sbjct: 256 LNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQ 305
>TAIR|locus:2207180 [details] [associations]
symbol:KMS2 "AT1G05360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
GO:GO:0005783 EMBL:CP002684 IPI:IPI00518293 RefSeq:NP_563735.1
UniGene:At.42404 PRIDE:F4I8Q7 EnsemblPlants:AT1G05360.1
GeneID:837035 KEGG:ath:AT1G05360 OMA:PQVQIEA Uniprot:F4I8Q7
Length = 416
Score = 275 (101.9 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 74/165 (44%), Positives = 93/165 (56%)
Query: 75 CAPVDIEEP---ALSKRRTDSYSEINGGE--SPGVAADWVPSLWSIMNKVKLEAMMWGAG 129
C VD++ + +R+ S+ + E SP V + VP L SI+ +V++EA++WG G
Sbjct: 137 CGRVDLKSAIYDTIQLKRSPSWLDKPCHEFGSP-VFSSGVP-LSSILPQVQIEAILWGLG 194
Query: 130 TALGELPPYFLSRAARLSXXXXXXXXXXXXXXXXXXXIETLVNKV-----------GFFG 178
TALGELPPYF+SRAA LS I VN++ FF
Sbjct: 195 TALGELPPYFISRAASLSGGKMKELETCSGDDNGF--IAKRVNQIKSWLLSHSQYLNFFT 252
Query: 179 ILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
IL AS+PNPLFDLAGI CG F PFW FF ATLIGKA+IK IQ
Sbjct: 253 ILILASVPNPLFDLAGIMCGQFEKPFWEFFLATLIGKAIIKTHIQ 297
>GENEDB_PFALCIPARUM|PF14_0714 [details] [associations]
symbol:PF14_0714 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014187 InterPro:IPR015414 Pfam:PF09335
HOGENOM:HOG000242387 OMA:NRMERET RefSeq:XP_001348888.1
ProteinModelPortal:Q8IK92 PRIDE:Q8IK92
EnsemblProtists:PF14_0714:mRNA GeneID:812296 KEGG:pfa:PF14_0714
EuPathDB:PlasmoDB:PF3D7_1474600 ProtClustDB:CLSZ2733877
Uniprot:Q8IK92
Length = 394
Score = 173 (66.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 118 KVKLEAMMWGAGTALGELPPYFLSR-AARLSXXXXXXXXXXXXXXXXXXXIET------- 169
K+ ++WG GTALGELPPY S AA+ I T
Sbjct: 162 KIYPYCLIWGIGTALGELPPYLTSYYAAKSKLSDEEFEEFQKDIKEGKKNIITAMKIWML 221
Query: 170 -LVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
+ K G + + PN +FDL GI CGHFL+PF FF ++GKA++K IQ
Sbjct: 222 DFIKKYGSISVFLLSCWPNVMFDLCGICCGHFLMPFQNFFIPLVLGKAIVKTIIQ 276
>UNIPROTKB|Q8IK92 [details] [associations]
symbol:PF14_0714 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014187 InterPro:IPR015414 Pfam:PF09335
HOGENOM:HOG000242387 OMA:NRMERET RefSeq:XP_001348888.1
ProteinModelPortal:Q8IK92 PRIDE:Q8IK92
EnsemblProtists:PF14_0714:mRNA GeneID:812296 KEGG:pfa:PF14_0714
EuPathDB:PlasmoDB:PF3D7_1474600 ProtClustDB:CLSZ2733877
Uniprot:Q8IK92
Length = 394
Score = 173 (66.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 118 KVKLEAMMWGAGTALGELPPYFLSR-AARLSXXXXXXXXXXXXXXXXXXXIET------- 169
K+ ++WG GTALGELPPY S AA+ I T
Sbjct: 162 KIYPYCLIWGIGTALGELPPYLTSYYAAKSKLSDEEFEEFQKDIKEGKKNIITAMKIWML 221
Query: 170 -LVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQ 223
+ K G + + PN +FDL GI CGHFL+PF FF ++GKA++K IQ
Sbjct: 222 DFIKKYGSISVFLLSCWPNVMFDLCGICCGHFLMPFQNFFIPLVLGKAIVKTIIQ 276
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 219 0.00092 112 3 11 22 0.37 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 610 (65 KB)
Total size of DFA: 177 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 17.53u 0.06s 17.59t Elapsed: 00:00:12
Total cpu time: 17.53u 0.06s 17.59t Elapsed: 00:00:14
Start: Thu Aug 15 13:19:39 2013 End: Thu Aug 15 13:19:53 2013