BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13533
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 170/214 (79%), Gaps = 13/214 (6%)
Query: 3 DQENSFIHEEE--NFE--NGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQ 58
D N I E++ +F+ NG H E+ +AD D+ EL A+KARVREMEEEAEKLKQ
Sbjct: 8 DSGNPLIGEDQLDSFDETNGAHDESLLNDADMD-VKDDPELEAIKARVREMEEEAEKLKQ 66
Query: 59 LQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSV 118
LQSEVDKQM++GSPP + LN+SIEEK E D RSIYVGNVDYGATAEELE HFHGCGS+
Sbjct: 67 LQSEVDKQMNLGSPPGITSPLNMSIEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSI 126
Query: 119 NRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
NRVTILCN+FDGHPKGFAYIEF D+DSVQTAMAMDESLFRGRQIKV PKRTNRPGISTTN
Sbjct: 127 NRVTILCNRFDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTN 186
Query: 179 RGGPRGRG----RGR-VSRGAAMYGGYRPVRRAR 207
R PRGRG RGR SRG + GYRP+RR R
Sbjct: 187 R-PPRGRGVSTFRGRGASRGG--FYGYRPMRRPR 217
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 168/218 (77%), Gaps = 15/218 (6%)
Query: 1 MSDQENSFIHEEENFE-----NGDH----IENGDMEADQSKCTDEAELAAMKARVREMEE 51
M+D E+ + E++ E NG H + + D++ D+ EL A+KARVREMEE
Sbjct: 1 MADNEDLGLGPEDHLESLDETNGMHDDALLNDTDLDGTGG---DDPELEAIKARVREMEE 57
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
EAEKLKQLQSEVDKQM+MGSPP + LN+S+EEK E D RSIYVGNVDYGATAEELE H
Sbjct: 58 EAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLEEKMEVDNRSIYVGNVDYGATAEELEQH 117
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
FHGCGS+NRVTILCNK+DGHPKGFAYIEF D+DSVQTAMAMDESLFRGR IKV PKRTNR
Sbjct: 118 FHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRPIKVMPKRTNR 177
Query: 172 PGISTTNRGGPRGRGRGRVSRGA--AMYGGYRPVRRAR 207
PG+STTNR PRGRG R +RG Y GYRP+RR R
Sbjct: 178 PGLSTTNR-PPRGRGAFRGARGVGRGFYAGYRPMRRPR 214
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 164/205 (80%), Gaps = 15/205 (7%)
Query: 13 ENFENGDHIENGDMEADQSK------CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EN ++GD I M+ D K D+ EL A+KARVREMEEEAEKLKQLQSEVDKQ
Sbjct: 19 ENGQDGDAI----MQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQ 74
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M+MGSPP + LN+S+E+K+E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCN
Sbjct: 75 MNMGSPPGITSPLNMSLEDKREVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCN 134
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-R 185
KFDGHPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTNRPG+S TNR GPRG R
Sbjct: 135 KFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNR-GPRGTR 193
Query: 186 GRGRVSRG---AAMYGGYRPVRRAR 207
G V+RG + Y GYRP RR R
Sbjct: 194 GYRGVARGIIRGSAYFGYRPTRRPR 218
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 164/206 (79%), Gaps = 17/206 (8%)
Query: 13 ENFENGDHIENGDMEADQSK------CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EN ++GD I M+ D K D+ EL A+KARVREMEEEAEKLKQLQSEVDKQ
Sbjct: 19 ENGQDGDAI----MQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQ 74
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M+MGSPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCN
Sbjct: 75 MNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCN 134
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----G 181
KFDGHPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTNRPG+S TNRG G
Sbjct: 135 KFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGTRG 194
Query: 182 PRGRGRGRVSRGAAMYGGYRPVRRAR 207
RG RG + RG+A Y GYRP+RR R
Sbjct: 195 YRGIARG-IIRGSA-YFGYRPIRRPR 218
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 164/206 (79%), Gaps = 17/206 (8%)
Query: 13 ENFENGDHIENGDMEADQSK------CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EN ++GD I M+ D K D+ EL A+KARVREMEEEAEKLKQLQSEVDKQ
Sbjct: 19 ENGQDGDAI----MQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQ 74
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M+MGSPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCN
Sbjct: 75 MNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCN 134
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----G 181
KFDGHPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTNRPG+S TNRG G
Sbjct: 135 KFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGTRG 194
Query: 182 PRGRGRGRVSRGAAMYGGYRPVRRAR 207
RG RG + RG+A Y GYRP+RR R
Sbjct: 195 YRGIARG-IIRGSA-YFGYRPIRRPR 218
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 164/206 (79%), Gaps = 17/206 (8%)
Query: 13 ENFENGDHIENGDMEADQSK------CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EN ++GD I M+ D K D+ EL A+KARVREMEEEAEKLKQLQSEVDKQ
Sbjct: 19 ENGQDGDAI----MQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQ 74
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M+MGSPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGS+NRVTILCN
Sbjct: 75 MNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCN 134
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----G 181
KFDGHPKGFAYIEFA++DSVQTAMA+DES+FRGRQIKV PKRTNRPG+S TNRG G
Sbjct: 135 KFDGHPKGFAYIEFAERDSVQTAMAIDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGARG 194
Query: 182 PRGRGRGRVSRGAAMYGGYRPVRRAR 207
RG RG + RG+A Y GYRP+RR R
Sbjct: 195 YRGIARG-IIRGSA-YFGYRPIRRPR 218
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/202 (71%), Positives = 163/202 (80%), Gaps = 9/202 (4%)
Query: 13 ENFENGDHIENGD-MEADQSKC-TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
EN ++GD I D ++ D + D+ EL A+KARVREMEEEAEKLKQLQSEVDKQM+MG
Sbjct: 19 ENGQDGDTIMQCDGVKRDLGEANVDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
SPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCNKFDG
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGR 185
HPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTN+PG S TNRG G RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPRGARGYRGM 198
Query: 186 GRGRVSRGAAMYGGYRPVRRAR 207
RG + RG+A Y GYRP RR R
Sbjct: 199 ARG-IIRGSA-YFGYRPTRRPR 218
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 165/201 (82%), Gaps = 7/201 (3%)
Query: 13 ENFENGDHIENGD-MEADQSKC-TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
EN ++GD I D ++ + S+ D+ EL A+KARVREMEEEAEKLKQLQSEVDKQM+MG
Sbjct: 19 ENGQDGDAIMQCDGVKRELSEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
SPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCNKFDG
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGRGR 189
HPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTN+PG S TNR GPRG RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNR-GPRGARGYRG 197
Query: 190 VSRG---AAMYGGYRPVRRAR 207
++RG ++ Y GYRP RR R
Sbjct: 198 MTRGIIRSSAYFGYRPTRRPR 218
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ + EN +GD +GD E D+S D+ EL A+KARVREMEEEAEKLKQLQ+EV+KQ++
Sbjct: 12 LEDMENDVDGDEPVDGDAEVDKSGNYDDTELEAIKARVREMEEEAEKLKQLQTEVEKQLN 71
Query: 69 MGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKF 128
+GSP + LNLS+EEK E D RSIYVGNVDYGA AEELE HFHGCGS+NRVTILCNK+
Sbjct: 72 LGSPTGLTSSLNLSLEEKLEVDNRSIYVGNVDYGANAEELEQHFHGCGSINRVTILCNKY 131
Query: 129 DGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 188
DGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN+PG+ST+NR GR RG
Sbjct: 132 DGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNKPGMSTSNRISRAGRYRG 191
Query: 189 RVSRGAAMYGGYRPVRRAR 207
R RG +Y GYR RR R
Sbjct: 192 RAGRGYPLY-GYRLPRRPR 209
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 162/211 (76%), Gaps = 15/211 (7%)
Query: 1 MSDQENSFIHEEENFE-----NGDH----IENGDMEADQSKCTDEAELAAMKARVREMEE 51
M+D E+ + E++ E NG H + + D++ D+ EL A+KARVREMEE
Sbjct: 1 MADNEDLGLGPEDHLESLDETNGMHDDALLNDTDLDGTGG---DDPELEAIKARVREMEE 57
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
EAEKLKQLQSEVDKQM+MGSPP + LN+S+EEK E D RSIYVGNVDYGATAEELE H
Sbjct: 58 EAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLEEKMEVDNRSIYVGNVDYGATAEELEQH 117
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
FHGCGS+NRVTILCNK+DGHPKGFAYIEF D+DSVQTAMAMDESLFRGR IKV PKRTNR
Sbjct: 118 FHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRPIKVMPKRTNR 177
Query: 172 PGISTTNRGGPRGRGRGRVSRGA--AMYGGY 200
PG+STTNR PRGRG R +RG Y GY
Sbjct: 178 PGLSTTNR-PPRGRGAFRGARGVGRGFYAGY 207
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/197 (71%), Positives = 156/197 (79%), Gaps = 16/197 (8%)
Query: 13 ENFENGDHIENGDMEADQSK------CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EN ++GD I M+ D K D+ EL A+KARVREMEEEAEKLKQLQSEVDKQ
Sbjct: 19 ENGQDGDAI----MQCDGVKREINEANVDDPELEAIKARVREMEEEAEKLKQLQSEVDKQ 74
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M+MGSPP + LN+S+E+K E D RSIYVGNVDYGATAEELE HFHGCGSVNRVTILCN
Sbjct: 75 MNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCN 134
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----G 181
KFDGHPKGFAYIEFA++DSVQTAMAMDES+FRGRQIKV PKRTN+PG S TNRG G
Sbjct: 135 KFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPRGARG 194
Query: 182 PRGRGRGRVSRGAAMYG 198
RG RG + RG+A YG
Sbjct: 195 YRGMTRG-IIRGSAYYG 210
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/182 (73%), Positives = 146/182 (80%), Gaps = 4/182 (2%)
Query: 29 DQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKE 88
D D +LAA+KARVREMEEEAEKLKQ+Q+EVDKQMSMGSPP + LN+SIEEK E
Sbjct: 34 DDVSGVDVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIE 93
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD RS+YVGNVDYGATAEELE HFHGCGS+NRVTILCNKFDGHPKGFAYIEF DKDSVQT
Sbjct: 94 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQT 153
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA---AMYGGYRPVRR 205
AMAMDESLFRGRQIKV PKRTN+PG+S+TNR PR S + YRP+RR
Sbjct: 154 AMAMDESLFRGRQIKVMPKRTNKPGLSSTNR-PPRSMRGRGRSFRGGFNSYLAVYRPIRR 212
Query: 206 AR 207
R
Sbjct: 213 GR 214
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 152/182 (83%), Gaps = 2/182 (1%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
D++ TD +LAA+KARVREMEEEAEKLKQ+ +EVDKQMS+GSPP + LN+S+EEK
Sbjct: 32 GDEASGTDVPDLAAIKARVREMEEEAEKLKQMHTEVDKQMSLGSPPGLTSPLNMSLEEKI 91
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
E D RS+Y+GNVDYGATAEELE HFHGCGS+NRVTILCNKFDGHPKGFAYIEF DKDSVQ
Sbjct: 92 ETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQ 151
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG--AAMYGGYRPVRR 205
TAMAMDESLFRGRQIKV PKRTN+PG+STTNR RGRGR RG + GYRP+RR
Sbjct: 152 TAMAMDESLFRGRQIKVMPKRTNKPGLSTTNRPPRGARGRGRSYRGGFTPYFSGYRPMRR 211
Query: 206 AR 207
R
Sbjct: 212 GR 213
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 149/172 (86%), Gaps = 2/172 (1%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+LAA+KARVREMEEEAEKLKQ+Q+EVDKQMSMGSPP + LN+SIEEK EAD RS+YVG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATAEELE HFHGCGS+NRVTILCNK+DGHPKGFAYIEF DKDSVQTAMAMDESLF
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG--AAMYGGYRPVRRAR 207
RGRQIKV PKRTN+PG+S+TNR RGRGR RG A Y G+RP RR R
Sbjct: 163 RGRQIKVMPKRTNKPGLSSTNRPPRTMRGRGRGYRGGLAPYYTGFRPPRRGR 214
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 147/182 (80%), Gaps = 4/182 (2%)
Query: 29 DQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKE 88
D++ + +LAA+KARVREMEEEAEKLKQ+Q+EVDKQMSMGSPP + LN+SIEEK E
Sbjct: 34 DEASGVEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIE 93
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD RS+YVGNVDYGATAEELE HFHGCGS+NRVTILCNKFDGHPKGFAYIEF DKDSVQT
Sbjct: 94 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQT 153
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA---AMYGGYRPVRR 205
AMAMDESLFRGRQIKV PKRTN+PG+S+TNR PR S + YRP+ R
Sbjct: 154 AMAMDESLFRGRQIKVMPKRTNKPGLSSTNR-PPRSMRGRGRSFRGGFNSYLAVYRPIPR 212
Query: 206 AR 207
R
Sbjct: 213 GR 214
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 168/220 (76%), Gaps = 13/220 (5%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQ 60
+S +E++ EN + D IENG S+ + +++L ++ARVREMEEEAEKLK+LQ
Sbjct: 15 LSSEEHNTQISLENSMSFDLIENGQSNNVDSQASADSDLEVIRARVREMEEEAEKLKKLQ 74
Query: 61 SEVDKQMS---MGSPPN---SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHG 114
S+VD++MS + S PN ++ NLS +EK EAD RS+YVGNVDY ATAEELE+HFHG
Sbjct: 75 SQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEELETHFHG 134
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
CGS+NRVTILCNKFDGHPKGFAYIEFAD DSV TAMAMD+SLFRGRQIKVNPKRTN+PGI
Sbjct: 135 CGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGI 194
Query: 175 STTNRG-GPRGRG--RGR-VSRGAA---MYGGYRPVRRAR 207
STTNR RGR RGR +SRG A YGGYRP RR R
Sbjct: 195 STTNRPVASRGRAMFRGRPMSRGGAQSSFYGGYRPSRRPR 234
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 162/208 (77%), Gaps = 13/208 (6%)
Query: 13 ENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS---M 69
EN + D IENG S+ + +++L ++ARVREMEEEAEKLK+LQS+VD++MS +
Sbjct: 27 ENSMSFDLIENGQSNNADSQASADSDLEVIRARVREMEEEAEKLKKLQSQVDQEMSNTPV 86
Query: 70 GSPPN---SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
S PN ++ NLS +EK EAD RS+YVGNVDY ATAEELE+HFHGCGS+NRVTILCN
Sbjct: 87 LSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCN 146
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-GPRGR 185
KFDGHPKGFAYIEFAD DSV TAMAMD+SLFRGRQIKVNPKRTN+PGISTTNR RGR
Sbjct: 147 KFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGR 206
Query: 186 G--RGR-VSRGAA---MYGGYRPVRRAR 207
RGR +SRG A YGGYRP RR R
Sbjct: 207 AMFRGRPMSRGGAQSSFYGGYRPSRRPR 234
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 162/208 (77%), Gaps = 13/208 (6%)
Query: 13 ENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS---M 69
EN + D IENG S+ + +++L ++ARVREMEEEAEKLK+LQS+VD++MS +
Sbjct: 110 ENSMSFDLIENGQSNNADSQASADSDLEVIRARVREMEEEAEKLKKLQSQVDQEMSNTPV 169
Query: 70 GSPPN---SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
S PN ++ NLS +EK EAD RS+YVGNVDY ATAEELE+HFHGCGS+NRVTILCN
Sbjct: 170 LSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCN 229
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-GPRGR 185
KFDGHPKGFAYIEFAD DSV TAMAMD+SLFRGRQIKVNPKRTN+PGISTTNR RGR
Sbjct: 230 KFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGR 289
Query: 186 G--RGR-VSRGAA---MYGGYRPVRRAR 207
RGR +SRG A YGGYRP RR R
Sbjct: 290 AMFRGRPMSRGGAQSSFYGGYRPSRRPR 317
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 158/207 (76%), Gaps = 20/207 (9%)
Query: 2 SDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQS 61
+D ++ I EE D+++ DM+ D EL A+KARV+EMEEEAEKLKQLQ+
Sbjct: 18 NDDDSELILEE------DYLKGADMQID-------PELEAIKARVKEMEEEAEKLKQLQT 64
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
EV KQM++GSP +L + EEK E D RSIYVGNVDYGATAEELE+HFHGCG++NRV
Sbjct: 65 EVTKQMTLGSPTGVTPIL--TAEEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRV 122
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
TILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR
Sbjct: 123 TILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-F 181
Query: 182 PRG--RGRG-RVSRGAAMYGGYRPVRR 205
PRG RGRG R+SR A YGG+R RR
Sbjct: 182 PRGSVRGRGARISR-ACCYGGHRGSRR 207
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 158/207 (76%), Gaps = 20/207 (9%)
Query: 2 SDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQS 61
+D ++ I EE D+++ DM+ D EL A+KARV+EMEEEAEKLKQLQ+
Sbjct: 18 NDDDSELILEE------DYLKGADMQID-------PELEAIKARVKEMEEEAEKLKQLQT 64
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
EV KQM++GSP +L + EEK E D RSIYVGNVDYGATAEELE+HFHGCG++NRV
Sbjct: 65 EVTKQMTLGSPTGVTPIL--TAEEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRV 122
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
TILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR
Sbjct: 123 TILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-F 181
Query: 182 PRG--RGRG-RVSRGAAMYGGYRPVRR 205
PRG RGRG R+SR A YGG+R RR
Sbjct: 182 PRGSVRGRGARISR-ACCYGGHRGSRR 207
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 150/189 (79%), Gaps = 13/189 (6%)
Query: 19 DHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
D+++ +M+ D EL A+KARV+EMEEEAEKLKQLQSEV KQM++GSP S +
Sbjct: 29 DYLKGSEMQID-------PELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGSTPM 81
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
L + EEK E D RSIYVGNVDYGATAEELE+HFHGCG++NRVTILCNK DGHPKGFAYI
Sbjct: 82 L--TAEEKAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYI 139
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGR-GRVSRGAAM 196
EF K+ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TNR PRG RGR RVSR A
Sbjct: 140 EFGSKEFVETALAMNETLFRGRQIKVNPKRTNRPGLCQTNR-FPRGARGRAARVSR-ACC 197
Query: 197 YGGYRPVRR 205
YGG+R RR
Sbjct: 198 YGGHRGTRR 206
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 150/189 (79%), Gaps = 13/189 (6%)
Query: 19 DHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
D+++ +M+ D EL A+KARV+EMEEEAEKLKQLQSEV KQM++GSP + +
Sbjct: 29 DYLKGAEMQID-------PELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGATPI 81
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
+ S EEK E D RSIYVGNVDYGATAEELE+HFHGCG++NRVTILCNK DGHPKGFAYI
Sbjct: 82 M--SAEEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 139
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGRG-RVSRGAAM 196
EF K+ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR PRG RGR RVSR A
Sbjct: 140 EFGSKEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-FPRGMRGRASRVSR-ACC 197
Query: 197 YGGYRPVRR 205
YG +R RR
Sbjct: 198 YGAHRGTRR 206
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 151/197 (76%), Gaps = 13/197 (6%)
Query: 11 EEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
E E D+++ +M+ D EL A+KARV+EMEEEAEKLKQLQSEV KQM++G
Sbjct: 21 EAELLIEDDYLKGSEMQID-------PELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLG 73
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
SP S +L + EEK E D RSIYVGNVDYGATAEELE+HFHGCG++NRVTILCNK DG
Sbjct: 74 SPTGSTPML--TAEEKAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADG 131
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGR-G 188
HPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TNR PRG RGR
Sbjct: 132 HPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVNPKRTNRPGMCQTNR-FPRGVRGRAA 190
Query: 189 RVSRGAAMYGGYRPVRR 205
RVSR A YG +R RR
Sbjct: 191 RVSR-ACCYGAHRGTRR 206
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 140/184 (76%), Gaps = 17/184 (9%)
Query: 16 ENGDH--IENGDMEADQS------------KCTDEAELAAMKARVREMEEEAEKLKQLQS 61
ENGD ENGD + D + D+ EL A+KARVREMEEEAEKLKQ+QS
Sbjct: 33 ENGDSEAQENGDPQHDSTGGELLDESLGDEHSIDDPELEAIKARVREMEEEAEKLKQMQS 92
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
EV+KQMS+ P L L++EEK E D RSIYVGNVDYGATAEELE HFHGCGS+NRV
Sbjct: 93 EVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRV 150
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR-G 180
TILC+KF GHPKGFAYIEF DKDS+QTAMA+DESLFRGRQIKV KRTNRPGISTTNR
Sbjct: 151 TILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTNRPP 210
Query: 181 GPRG 184
P+G
Sbjct: 211 XPKG 214
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 136/177 (76%), Gaps = 16/177 (9%)
Query: 16 ENGDH--IENGDMEADQS------------KCTDEAELAAMKARVREMEEEAEKLKQLQS 61
ENGD ENGD + D + D+ EL A+KARVREMEEEAEKLKQ+QS
Sbjct: 33 ENGDSEAQENGDPQHDSTGGELLDESLGDEHSIDDPELEAIKARVREMEEEAEKLKQMQS 92
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
EV+KQMS+ P L L++EEK E D RSIYVGNVDYGATAEELE HFHGCGS+NRV
Sbjct: 93 EVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRV 150
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
TILC+KF GHPKGFAYIEF DKDS+QTAMA+DESLFRGRQIKV KRTNRPGISTTN
Sbjct: 151 TILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTN 207
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 162/216 (75%), Gaps = 15/216 (6%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEADQSKCTDE-------AELAAMKARVREMEEEA 53
M+D E+ ++E++ E+ D NG+ EA+ T+E EL A+KARV+EMEEEA
Sbjct: 1 MAD-EDITLNEDQLLESLDET-NGEQEAEIVTETEEEGSMQIDPELEAIKARVKEMEEEA 58
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
EK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVGNVDYGA+AEELE+HFH
Sbjct: 59 EKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFH 117
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
GCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKV KRTNRPG
Sbjct: 118 GCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQIKVMSKRTNRPG 177
Query: 174 ISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
+STTN RG RGRG RVSR + + +R RRA
Sbjct: 178 LSTTNRFARGSFRGRG-ARVSR-SCCHSTFRGARRA 211
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 151/203 (74%), Gaps = 13/203 (6%)
Query: 10 HEEEN-FEN-GDHIENGDMEADQ----SKCTDEAELAAMKARVREMEEEAEKLKQLQSEV 63
HE +N F+N +E+G++E D D+ EL A+KARVREMEEEAEKLK++Q EV
Sbjct: 15 HENDNEFDNEAQLLESGEVEGDNGVADDSTADDPELEAIKARVREMEEEAEKLKEMQKEV 74
Query: 64 DKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
D QM++ SP ++ S EEK +AD RS+YVGNVDYGATAEELE HFHGCGSVNRVTI
Sbjct: 75 DTQMNLTSPTTASPFP--SAEEKMDADARSVYVGNVDYGATAEELEQHFHGCGSVNRVTI 132
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
LC+KF GHPKGFAY+EFADKDSV TA A+DESLFRGRQIKV+ KRTNRPGIS+TNR +
Sbjct: 133 LCDKFTGHPKGFAYVEFADKDSVTTAQALDESLFRGRQIKVSAKRTNRPGISSTNR---K 189
Query: 184 GRGRGRVSRGAAMYGG--YRPVR 204
RG R + YGG Y P R
Sbjct: 190 PRGFRPRGRFRSPYGGGSYTPRR 212
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 145/188 (77%), Gaps = 13/188 (6%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E G M+ D EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + L
Sbjct: 34 EEGSMQID-------PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PL 85
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S+EEK+E D RS+YVGNVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFG 145
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYG 198
K+ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 146 SKEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHS 203
Query: 199 GYRPVRRA 206
+R RRA
Sbjct: 204 TFRGARRA 211
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 152/199 (76%), Gaps = 8/199 (4%)
Query: 11 EEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
EE N E I N ++E + S D EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ G
Sbjct: 18 EETNGEQETEITN-EVEEEGSMQID-PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGG 75
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
S + LS+EEK+E D RS+YVGNVDYGA+AEELE+HFHGCG++NRVTILCNK DG
Sbjct: 76 STTGLATV-PLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADG 134
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGR 187
HPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG
Sbjct: 135 HPKGFAYIEFGSKEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG- 193
Query: 188 GRVSRGAAMYGGYRPVRRA 206
RVSR A + +R RRA
Sbjct: 194 ARVSR-ACCHSTFRGARRA 211
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 145/188 (77%), Gaps = 13/188 (6%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E G M+ D EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + L
Sbjct: 34 EEGSMQID-------PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PL 85
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S+EEK+E D RS+YVGNVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFG 145
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYG 198
K+ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 146 SKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHS 203
Query: 199 GYRPVRRA 206
+R RRA
Sbjct: 204 TFRGARRA 211
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVG 105
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 106 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 165
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 166 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRGARRA 215
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVG 105
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 106 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 165
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 166 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRGARRA 215
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 144/188 (76%), Gaps = 13/188 (6%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E G M+ D EL A+KARV+EMEEEAEK+KQ+QSEVDKQM GS + L
Sbjct: 34 EEGSMQID-------PELEAIKARVKEMEEEAEKIKQMQSEVDKQMRGGSTTGLATV-PL 85
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S+EEK+E D RS+YVGNVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFG 145
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYG 198
K+ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 146 SKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHS 203
Query: 199 GYRPVRRA 206
+R RRA
Sbjct: 204 TFRGARRA 211
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRGARRA 211
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 164/215 (76%), Gaps = 16/215 (7%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEA-------DQSKCTDEAELAAMKARVREMEEEA 53
M+D++ S ++E++ EN D NG+ EA D++ + EL A+KARV+EMEEEA
Sbjct: 1 MADEDLS-LNEDQLLENLDEA-NGENEAELMNENEDETNMQIDPELEAIKARVKEMEEEA 58
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
EK+KQ+QSEVDKQM+ + + + LS+EEK+E D RS+YVGNVDYGA+AEELE+HFH
Sbjct: 59 EKIKQMQSEVDKQMAGSTTGLAT--VPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFH 116
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
GCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LFRGRQIKV KRTNRPG
Sbjct: 117 GCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPG 176
Query: 174 ISTTNRGGPRG--RGRG-RVSRGAAMYGGYRPVRR 205
+STTNR PRG RGRG R+SR A + +R RR
Sbjct: 177 LSTTNR-FPRGTFRGRGARISR-ACCHTSFRGTRR 209
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRGARRA 211
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATV-PLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGTFRGRG-ARVSR-ACCHSTFRGARRA 211
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLA-AVPLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRGARRA 211
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/164 (74%), Positives = 140/164 (85%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DKDSV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVR 254
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
T+MA+D+SLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 255 TSMALDDSLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARAT 298
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
++ EL A+KARVREMEEEAEKLK++Q+EV+KQM+M SP + +S+E+K E D RS
Sbjct: 46 VEDPELEAIKARVREMEEEAEKLKEMQNEVEKQMNMTSP---TQMTPISLEDKVEVDARS 102
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDY ATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIE+ADKDSVQT++A+D
Sbjct: 103 VYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEYADKDSVQTSLALD 162
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTN 178
ESLF+GRQIKV PKRTNRPGISTTN
Sbjct: 163 ESLFKGRQIKVLPKRTNRPGISTTN 187
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 134/169 (79%), Gaps = 2/169 (1%)
Query: 10 HEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM 69
+E EN ++ + + D ++ EL A+KARVREMEEEAEKLK LQSEV+KQ++
Sbjct: 17 YESENLQDTNDFTGDNGAGDTDSMMEDPELEAIKARVREMEEEAEKLKMLQSEVEKQIN- 75
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
SP + N+S+EEK E D RS++VGNVDYGATAEELE HFHGCGS+NRVTILCNK+D
Sbjct: 76 -SPTGVASSPNMSVEEKMEVDARSVFVGNVDYGATAEELEQHFHGCGSINRVTILCNKWD 134
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
G PKGFAYIEF DKDSVQTAMA+DESLFRGRQIKV KRTNRPGIS++N
Sbjct: 135 GQPKGFAYIEFGDKDSVQTAMALDESLFRGRQIKVMLKRTNRPGISSSN 183
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/162 (74%), Positives = 141/162 (87%)
Query: 30 QSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEA 89
+ + E+EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EA
Sbjct: 12 KQRLFSESELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEA 71
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T+
Sbjct: 72 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 131
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
+A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 132 LALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 173
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 139/172 (80%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLA-AVPLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG R SR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARASR-ACCHSTFRGARRA 211
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/164 (73%), Positives = 140/164 (85%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 254
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 255 TSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/164 (73%), Positives = 140/164 (85%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 254
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 255 TSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/157 (76%), Positives = 138/157 (87%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
D EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD RSI
Sbjct: 174 DLEELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSI 233
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DE
Sbjct: 234 YVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 293
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
SLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 294 SLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 330
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 139/172 (80%), Gaps = 6/172 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARV+EMEEEAEK+KQ+QSEVDKQM+ GS + LS+EEK+E D RS+YVG
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLA-AVPLSLEEKQEIDTRSVYVG 101
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFA+IEF K+ V+TA+AM+E+LF
Sbjct: 102 NVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAFIEFGSKEFVETALAMNETLF 161
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRPVRRA 206
RGRQIKV KRTNRPG+STTN RG RGRG R SR A + +R RRA
Sbjct: 162 RGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARASR-ACCHSTFRGARRA 211
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 140/164 (85%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 254
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 255 TSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 23 NGDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 71 SGQVEGDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 130
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 240
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/159 (75%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD R
Sbjct: 113 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 172
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DKDSV+T+MA+
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRTSMAL 232
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
D+SLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 233 DDSLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARAT 271
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/156 (76%), Positives = 138/156 (88%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD RSIY
Sbjct: 4 EKELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIY 63
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DES
Sbjct: 64 VGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDES 123
Query: 156 LFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
LFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 124 LFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 159
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/154 (77%), Positives = 137/154 (88%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD RSIYVG
Sbjct: 184 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 243
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLF
Sbjct: 244 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 303
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
RGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 304 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 337
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/154 (77%), Positives = 137/154 (88%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD RSIYVG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 60
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLF
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
RGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 121 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 154
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/167 (73%), Positives = 142/167 (85%), Gaps = 4/167 (2%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD RSIYVG
Sbjct: 7 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 66
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEF+DK+SV+T++A+DESLF
Sbjct: 67 NVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLF 126
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGP----RGRGRGRVSRGAAMYGGY 200
RGRQIKV PKRTNRPGISTT+RG P RGRG G S A Y G+
Sbjct: 127 RGRQIKVIPKRTNRPGISTTDRGFPRTRYRGRGSGYSSSRARFYSGF 173
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/156 (76%), Positives = 138/156 (88%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD RSIY
Sbjct: 4 EKELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIY 63
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DES
Sbjct: 64 VGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDES 123
Query: 156 LFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
LFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 124 LFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 159
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 143/169 (84%), Gaps = 1/169 (0%)
Query: 24 GDMEADQS-KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S
Sbjct: 163 GLVEGDPGDSAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMS 222
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
IEE+ EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+D
Sbjct: 223 IEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSD 282
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
K+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 283 KESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 331
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD R
Sbjct: 113 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 172
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 232
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 233 DESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD R
Sbjct: 80 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 139
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+
Sbjct: 140 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 199
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 200 DESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 238
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 23 NGDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 102 SGLVEGDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 161
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 24 GDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
G +EAD ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S
Sbjct: 99 GLVEADPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMS 158
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+EEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+D
Sbjct: 159 LEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
K+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 267
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 23 NGDMEADQS-KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 84 SGLVEGDPGDSAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 143
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 144 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 203
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 204 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 253
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 147/187 (78%), Gaps = 7/187 (3%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNN---LLNLSIE 84
AD + + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIE
Sbjct: 137 ADWIRSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNGEGVAPVIMSIE 196
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+
Sbjct: 197 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 256
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV----SRGAAMYGGY 200
SV+T+MA+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R S A Y G+
Sbjct: 257 SVRTSMALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATNYSSSRARFYSGF 316
Query: 201 RPVRRAR 207
R R
Sbjct: 317 NSRPRGR 323
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD R
Sbjct: 115 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 174
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+
Sbjct: 175 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 234
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 235 DESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 273
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 137/154 (88%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEE+ EAD RSIYVG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEERMEADARSIYVG 60
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLF
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
RGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 121 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 154
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 24 GDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
G +E+D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S
Sbjct: 103 GLVESDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMS 162
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
IEE+ EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+D
Sbjct: 163 IEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
K+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD R
Sbjct: 113 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 172
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 232
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 233 DESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 23 NGDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 102 SGLVEGDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 161
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM++ PP ++ SIEEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIM--SIEEKIEADGR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRPVR 204
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P R
Sbjct: 159 DESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSSRARYYSGYTPPR 213
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 24 GDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
G +EAD ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S
Sbjct: 99 GLVEADPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMS 158
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+EEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+D
Sbjct: 159 LEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
K+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 267
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 24 GDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
G +EAD ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S
Sbjct: 101 GLVEADPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMS 160
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+EEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+D
Sbjct: 161 LEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSD 220
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
K+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 KESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 269
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/145 (71%), Positives = 126/145 (86%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
++AEL A+KARVREMEEEAEKLK++Q+EVDKQM++ SPP + +LS+EEK E D RS+
Sbjct: 45 EDAELEAIKARVREMEEEAEKLKEMQNEVDKQMNLSSPPPAQAAPHLSLEEKGEVDARSV 104
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDY ATAEELESHFHGCG +NRVTILC+KF GHPKG+AY+EF +KDS+ TA ++
Sbjct: 105 YVGNVDYSATAEELESHFHGCGPINRVTILCDKFTGHPKGYAYVEFVEKDSIDTACTLNL 164
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNR 179
SLF+GRQI+VN KRTNRPGISTT+R
Sbjct: 165 SLFKGRQIRVNAKRTNRPGISTTDR 189
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP ++ SIEEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPVGPVIM--SIEEKMEADAR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRPVR 204
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P R
Sbjct: 159 DESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYYSGYTPPR 213
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 142/175 (81%), Gaps = 5/175 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP ++ S EEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPVGPVIM--SFEEKMEADAR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRPVR 204
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P R
Sbjct: 159 DESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYYSGYTPPR 213
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/159 (74%), Positives = 139/159 (87%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD R
Sbjct: 109 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADAR 168
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+
Sbjct: 169 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 228
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 229 DESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 267
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM++ PP ++ SIEEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPVGPVIM--SIEEKMEADGR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRPVR 204
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P R
Sbjct: 159 DESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSLRARYYSGYTPPR 213
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 142/173 (82%), Gaps = 5/173 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM++ PP ++ SIEEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIM--SIEEKIEADGR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMYGGYRP 202
DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y GY P
Sbjct: 159 DESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSSRARYYSGYTP 211
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 141/173 (81%), Gaps = 5/173 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP ++ S EEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPVGPVIM--SFEEKMEADAR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRP 202
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P
Sbjct: 159 DESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYYSGYTP 211
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 150/196 (76%), Gaps = 6/196 (3%)
Query: 15 FENGDHIENG-DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP 73
E D ++NG D+ +++ ++ A+ R++E+EEEA+ ++Q+QS+V+KQM+M +
Sbjct: 14 VEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 74 NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
N++ + SIE+K EAD RS+YVGNVDY +TAEELE+HFHGCGSVNRVTIL +KF GHPK
Sbjct: 74 NTSQSV-ASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPK 132
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG--RVS 191
GFAYIEFADK++VQTA+A+DESLFRGRQIKV KRTNRPG+STTNR PR RGRG RV
Sbjct: 133 GFAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNR-PPRARGRGGARVI 191
Query: 192 RGAAMYGGYRPVRRAR 207
+Y GYR R R
Sbjct: 192 V-KYIYAGYRARRPPR 206
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 142/173 (82%), Gaps = 5/173 (2%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM++ PP ++ SIEEK EAD R
Sbjct: 41 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPVGPVIM--SIEEKMEADGR 98
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEFADK+SV+TAMA+
Sbjct: 99 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMAL 158
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR---VSRGAAMYGGYRP 202
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R S A Y GY P
Sbjct: 159 DESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSLRARYYSGYTP 211
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 143/175 (81%), Gaps = 8/175 (4%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM++ PP ++ SIEEK EAD R
Sbjct: 45 AIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIM--SIEEKMEADAR 102
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+TAMA+
Sbjct: 103 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMAL 162
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR-----VSRGAAMYGGYRP 202
DESLFRGRQIKV KRTNRPGISTT+RG PR R R R SR A Y GY P
Sbjct: 163 DESLFRGRQIKVGVKRTNRPGISTTDRGFPRARFRSRGGNFNPSR-ARYYSGYTP 216
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 147/189 (77%), Gaps = 6/189 (3%)
Query: 15 FENGDHIENG-DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP 73
E D ++NG D+ +++ ++ A+ R++E+EEEA+ ++Q+QS+V+KQM+M +
Sbjct: 14 IEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 74 NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
N++ + SIE+K EAD RS+YVGNVDY +TAEELE+HFHGCGSVNRVTIL +KF GHPK
Sbjct: 74 NTSQSV-ASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPK 132
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG--RVS 191
GFAYIEFADK++VQTA+A+DESLFRGRQIKV KRTNRPG+STTNR PR RGRG RV
Sbjct: 133 GFAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNR-PPRTRGRGGTRVI 191
Query: 192 RGAAMYGGY 200
+Y GY
Sbjct: 192 V-KYIYAGY 199
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 135/151 (89%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADL 91
+ ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD
Sbjct: 102 QTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADA 161
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A
Sbjct: 162 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLA 221
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
+DESLFRGRQIKV PKRTNRPGISTT+RG P
Sbjct: 222 LDESLFRGRQIKVVPKRTNRPGISTTDRGFP 252
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 144/185 (77%), Gaps = 21/185 (11%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADL 91
+ ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD
Sbjct: 103 QTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADA 162
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEF+DK+SV+T++A
Sbjct: 163 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLA 222
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG---------------------RGRGRV 190
+DESLFRGRQIKV PKRTNRPGISTT+RG PR R RGRV
Sbjct: 223 LDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARASSYSSRSRFYSGYTPRPRGRV 282
Query: 191 SRGAA 195
RG A
Sbjct: 283 YRGRA 287
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 134/151 (88%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADL 91
+ ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD
Sbjct: 103 QTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADA 162
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF DK+SV+T++A
Sbjct: 163 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLA 222
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
+DESLFRGRQIKV PKRTNRPGISTT+RG P
Sbjct: 223 LDESLFRGRQIKVVPKRTNRPGISTTDRGFP 253
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 145/190 (76%), Gaps = 4/190 (2%)
Query: 15 FENGDHIENG-DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP 73
E D ++ G D+ +++ ++ A+ R++E+EEEA+ ++Q+Q++V+KQM+M S
Sbjct: 13 LEEDDILDGGSDLATSGDHMSEDPDMEALTNRMKEIEEEAQLIRQMQNDVEKQMNMSSSS 72
Query: 74 NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
+ + S+EEK EAD RSIYVGNVDY +TAEELE+HFHGCGSVNRVTIL +K+ GHPK
Sbjct: 73 SLASSTLASMEEKIEADSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPK 132
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG--RVS 191
GFAYIEFADK+SVQTAMA+DESLFRGRQIKV PKRTNRPG+STTNR PR RGRG RV
Sbjct: 133 GFAYIEFADKESVQTAMALDESLFRGRQIKVCPKRTNRPGVSTTNR-PPRARGRGGARVI 191
Query: 192 RGAAMYGGYR 201
GGYR
Sbjct: 192 VKYIYGGGYR 201
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 119/144 (82%), Gaps = 11/144 (7%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E +L +++ARVREM EEAEKLK+LQSEVDK N LS +EKKE D RSI
Sbjct: 22 EEEDLDSLRARVREMAEEAEKLKKLQSEVDK-----------NTTQLSEQEKKEIDQRSI 70
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYGATAEELE HFHGCGSVNRVTILC+KF GHPKGFAYIEFADKDSV+TAMAMD+
Sbjct: 71 YVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFADKDSVETAMAMDD 130
Query: 155 SLFRGRQIKVNPKRTNRPGISTTN 178
SLFRGRQIKV KRTN PGISTTN
Sbjct: 131 SLFRGRQIKVLQKRTNMPGISTTN 154
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 116/132 (87%)
Query: 60 QSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
Q+EV+KQM+M PP + + +SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVN
Sbjct: 12 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVN 71
Query: 120 RVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
RVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+R
Sbjct: 72 RVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDR 131
Query: 180 GGPRGRGRGRVS 191
G PR R R R +
Sbjct: 132 GFPRARYRARTT 143
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 141/192 (73%), Gaps = 28/192 (14%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 254
Query: 148 TAMAMDESLFRGRQIKVN----------------------------PKRTNRPGISTTNR 179
T++A+DESLFRGRQIKV+ PKRTNRPGISTT+R
Sbjct: 255 TSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRPGISTTDR 314
Query: 180 GGPRGRGRGRVS 191
G PR R R R +
Sbjct: 315 GFPRARYRARTT 326
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 140/185 (75%), Gaps = 27/185 (14%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
T + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +S+EEK EAD RS
Sbjct: 25 TRQEELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARS 84
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+D
Sbjct: 85 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 144
Query: 154 ESLFRGRQIKVN---------------------------PKRTNRPGISTTNRGGPRGRG 186
ESLFRGRQIKV+ PKRTNRPGISTT+RG PR R
Sbjct: 145 ESLFRGRQIKVSIVPWLWVLCRFSALKPRLSVLSPLQVIPKRTNRPGISTTDRGFPRARY 204
Query: 187 RGRVS 191
R R +
Sbjct: 205 RARTT 209
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 116/132 (87%)
Query: 60 QSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
Q+EV+KQM+M PP + + +SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVN
Sbjct: 12 QNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVN 71
Query: 120 RVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
RVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+R
Sbjct: 72 RVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDR 131
Query: 180 GGPRGRGRGRVS 191
G PR R R R +
Sbjct: 132 GFPRARYRARTT 143
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 141/192 (73%), Gaps = 28/192 (14%)
Query: 28 ADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
AD + EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK
Sbjct: 135 ADWIHSSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKM 194
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 254
Query: 148 TAMAMDESLFRGRQIKVN----------------------------PKRTNRPGISTTNR 179
T++A+DESLFRGRQIKV+ PKRTNRPGISTT+R
Sbjct: 255 TSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRPGISTTDR 314
Query: 180 GGPRGRGRGRVS 191
G PR R R R +
Sbjct: 315 GFPRARYRARTT 326
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 134/151 (88%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADL 91
+ ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD
Sbjct: 74 QTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADA 133
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+K+ GHPKGFAYIEF++K+SV+T+MA
Sbjct: 134 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSEKESVRTSMA 193
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
+DESLFRGRQIKV KRTN+PGISTT+RG P
Sbjct: 194 LDESLFRGRQIKVGAKRTNKPGISTTDRGFP 224
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 147/194 (75%), Gaps = 11/194 (5%)
Query: 15 FENGDHIENG-DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP 73
E D ++NG D+ +++ ++ A+ R++E+EEEA+ ++Q+QS+V+KQM+M +
Sbjct: 14 IEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 74 NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
N++ + SIE+K EAD RS+YVGNVDY +TAEELE+HFHGCGSVNRVTIL +KF GHPK
Sbjct: 74 NTSQSV-ASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPK 132
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIK-----VNPKRTNRPGISTTNRGGPRGRGRG 188
GFAYIEFADK++VQTA+A+DESLFRGRQIK V KRTNRPG+STTNR PR RGRG
Sbjct: 133 GFAYIEFADKEAVQTALALDESLFRGRQIKASFCSVCAKRTNRPGVSTTNR-PPRARGRG 191
Query: 189 --RVSRGAAMYGGY 200
RV +Y GY
Sbjct: 192 GARVIV-KYIYAGY 204
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 145/198 (73%), Gaps = 29/198 (14%)
Query: 23 NGDMEADQS-KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 71 SGLVEGDPGDSAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 130
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 142 DKDSVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRPG 173
DK+SV+T++A+DESLFRGRQIKV+ PKRTNRPG
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRPG 250
Query: 174 ISTTNRGGPRGRGRGRVS 191
ISTT+RG PR R R R +
Sbjct: 251 ISTTDRGFPRARYRARTT 268
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 145/198 (73%), Gaps = 29/198 (14%)
Query: 23 NGDMEADQS-KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +
Sbjct: 71 SGLVEGDPGDSAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 130
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 142 DKDSVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRPG 173
DK+SV+T++A+DESLFRGRQIKV+ PKRTNRPG
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRPG 250
Query: 174 ISTTNRGGPRGRGRGRVS 191
ISTT+RG PR R R R +
Sbjct: 251 ISTTDRGFPRARYRARTT 268
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 153/210 (72%), Gaps = 8/210 (3%)
Query: 3 DQENSFIHEEENFENGDHIENGDMEA--DQSK-CTDEA--ELAAMKARVREMEEEAEKLK 57
D +NS + N + GD A DQS DE EL A+KARV+EME EAEKLK
Sbjct: 8 DNDNSIDVFATSVSNDGDLTVGDDSAVLDQSNGAADETDPELEAIKARVKEMEAEAEKLK 67
Query: 58 QLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGS 117
++Q++V+KQM++ SPP S +IEEK EAD RS++VGNVDYGATAEELE HFHG GS
Sbjct: 68 EMQNDVEKQMTL-SPPASATFAFPTIEEKVEADSRSVFVGNVDYGATAEELEQHFHGTGS 126
Query: 118 VNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 177
+NRVTILC+++ GHPKGFAY+EFAD +SV+TA A+D +LFRGRQ++VNPKRTN+ GIS++
Sbjct: 127 INRVTILCDRYSGHPKGFAYVEFADTESVETATALDGTLFRGRQLQVNPKRTNKHGISSS 186
Query: 178 NRGGPRGRGRGRVSRGAAMYGGYRPVRRAR 207
+RG PR RGRGR A YG RP R R
Sbjct: 187 DRGRPRYRGRGRGRHYAPYYG--RPRRAFR 214
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 126/158 (79%), Gaps = 16/158 (10%)
Query: 49 MEEEAEKLKQLQSEVDKQM-----SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGA 103
MEEEAEKL+++QSEV+KQ+ SMGSP + +S+E+K +AD RSI++GNVDY A
Sbjct: 1 MEEEAEKLREMQSEVEKQLILNSSSMGSPTPA-----ISLEDKLDADSRSIWIGNVDYAA 55
Query: 104 TAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIK 163
TAEEL SHFHGCGSVNR TILC+KF GHPKGFAY+EF DKDSV+TA A+D+SLF+GRQIK
Sbjct: 56 TAEELGSHFHGCGSVNRATILCDKFSGHPKGFAYVEFVDKDSVETAQALDDSLFKGRQIK 115
Query: 164 VNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYG-GY 200
V PKRTNRPGIS+TNR P GR R RG A +G GY
Sbjct: 116 VTPKRTNRPGISSTNR-PPSGRFR----RGGARFGSGY 148
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 116/134 (86%), Gaps = 4/134 (2%)
Query: 49 MEEEAEKLKQLQSEVDKQMSMGS----PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGAT 104
MEEEAEKLK++Q+EV++QM++ P + + SIE+K EAD RS+YVGNVDYGAT
Sbjct: 1 MEEEAEKLKEMQNEVERQMNLSPTAQRPGATAGVAFPSIEDKMEADGRSVYVGNVDYGAT 60
Query: 105 AEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
AEELE+HFHGCGS+NRVTILC+KF GHPKGFAYIEFADKDS++TA A+D+SLFRGRQIKV
Sbjct: 61 AEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKV 120
Query: 165 NPKRTNRPGISTTN 178
PKRTNRPG+STT+
Sbjct: 121 VPKRTNRPGVSTTD 134
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 119/147 (80%), Gaps = 15/147 (10%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-----SMGSPPNSNN 77
NGD ++ D+ EL A+KARV+EMEEEAEKLK++QSEV+KQM SMGSP +
Sbjct: 47 NGDADS-----VDDPELEAIKARVKEMEEEAEKLKEMQSEVEKQMNLSSSSMGSPTPA-- 99
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
+S+E+K +AD RSI+VGNVDY ATAEELE+HFHGCG VNRVTILC+KF GHPKGFAY
Sbjct: 100 ---VSLEDKLDADNRSIWVGNVDYTATAEELEAHFHGCGCVNRVTILCDKFSGHPKGFAY 156
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKV 164
+EF DKDSVQTA A+D+SLF+GRQIKV
Sbjct: 157 VEFVDKDSVQTAQALDDSLFKGRQIKV 183
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 122/152 (80%), Gaps = 2/152 (1%)
Query: 27 EADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEK 86
+A ++ ++ E+ A+KARV+EMEEEAEKLK++Q EV+K++ P +NN ++EEK
Sbjct: 74 DAKETIPIEDPEIEAIKARVKEMEEEAEKLKEMQGEVEKELMGSKPAQTNNFP--TMEEK 131
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
E+D RS+YVGNVDY ATAEEL HF+GCGS+NRVTILC+K+ GHPKGFAY+EF + DSV
Sbjct: 132 LESDSRSVYVGNVDYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSV 191
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
+ A+ +DESLFRGRQIKV KRTNRPG++ TN
Sbjct: 192 KMALDLDESLFRGRQIKVTAKRTNRPGLAVTN 223
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 106/125 (84%), Gaps = 5/125 (4%)
Query: 72 PPNSNNLLN-----LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
PP+ + +SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+
Sbjct: 5 PPHHSFFFKAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCD 64
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
KF GHPKGFAYIEF+DK+SV+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R
Sbjct: 65 KFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARY 124
Query: 187 RGRVS 191
R R +
Sbjct: 125 RARTT 129
>gi|118096584|ref|XP_001232211.1| PREDICTED: polyadenylate-binding protein 2 [Gallus gallus]
Length = 249
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 125/173 (72%), Gaps = 6/173 (3%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
+ EL A+KARVREMEEE ++LK+LQ E + + MGS L E K EAD RS
Sbjct: 62 VQDPELEAIKARVREMEEEDKRLKELQLEAESCLLMGS---EAGLFQRMTEGKVEADQRS 118
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVGNVDYG TAEELESHF+ CG +NRVTILC+KF GHPKG+AYIEF K SV+ A+ +D
Sbjct: 119 IYVGNVDYGGTAEELESHFNICGRINRVTILCDKFSGHPKGYAYIEFEQKSSVKAAVELD 178
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRGRVSRGAAMYGGYRPVR 204
ES+FRGR IKV PKRTN PGIS+T+RGG RG + RG + YGG +PVR
Sbjct: 179 ESIFRGRVIKVLPKRTNMPGISSTDRGGRRGHFQARGGLIPRWGYYGG-QPVR 230
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 136/196 (69%), Gaps = 18/196 (9%)
Query: 17 NGDHIENGDMEADQS-----KCTDE----AELAAMKARVREMEEEAEKLKQLQSEVDKQM 67
+GDH +GD D++ TDE AEL A+K R +E+E +A KL L+ +DK
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDK-- 64
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
SP + +N NLS E+K E DLRS+YVGNVDYG+TA+ELE+HF GCG +NRVTILCNK
Sbjct: 65 ---SPISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNK 121
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
F GHPKGFAYIEF +D+V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR
Sbjct: 122 FTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGR 180
Query: 188 GRVSRGAAMYGGYRPV 203
R RG + G+RP
Sbjct: 181 AR-GRGVSF--GFRPT 193
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 18/196 (9%)
Query: 17 NGDHIENGDMEADQS-----KCTDE----AELAAMKARVREMEEEAEKLKQLQSEVDKQM 67
+GDH +GD D++ TDE AEL A+K R +E+E +A KL L+ +DK
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDK-- 64
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
SP + +N NLS E+K E DLRS+YVGNVDYG+TA+ELE+HF GCG +NRVTILCNK
Sbjct: 65 ---SPISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNK 121
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
F GHPKGFAYIEF +D+ + A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR
Sbjct: 122 FTGHPKGFAYIEFDTRDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGR 180
Query: 188 GRVSRGAAMYGGYRPV 203
R RG + G+RP
Sbjct: 181 AR-GRGVSF--GFRPT 193
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 18/196 (9%)
Query: 17 NGDHIENGDMEADQS-----KCTDE----AELAAMKARVREMEEEAEKLKQLQSEVDKQM 67
+GDH +GD D++ TDE AEL A+K R +E+E +A KL L+ +DK
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDK-- 64
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
SP + +N NLS E+K E DLRS+YVGNVDYG+TA+ELE+HF GCG +NRVTILCNK
Sbjct: 65 ---SPISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNK 121
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
F GHPKGFAYIEF +D+V+ A+A+D+S FR RQ+KV PKR N PG+S TNR P RGR
Sbjct: 122 FTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRINVPGMSMTNR-PPFVRGR 180
Query: 188 GRVSRGAAMYGGYRPV 203
R RG + G+RP
Sbjct: 181 AR-GRGVSF--GFRPT 193
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 135/195 (69%), Gaps = 18/195 (9%)
Query: 17 NGDHIENGDMEADQS-----KCTDE----AELAAMKARVREMEEEAEKLKQLQSEVDKQM 67
+GDH + D D++ TDE AEL A+K R +E+E +A KL L+ +DK
Sbjct: 7 DGDHDVHEDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDK-- 64
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
SP + +N NLS E+K E DLRS+YVGNVDYG+TA+ELE+HF GCG +NRVTILCNK
Sbjct: 65 ---SPISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNK 121
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
F GHPKGFAYIEF +D+V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR
Sbjct: 122 FTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGR 180
Query: 188 GRVSRGAAMYGGYRP 202
+RG M G+RP
Sbjct: 181 ---ARGRGMSIGFRP 192
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 118/158 (74%), Gaps = 6/158 (3%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG----SPPNSNNLLN 80
D D D+ EL A+K RV+ ME EAEKLK+LQSEV+ QMSMG + S N
Sbjct: 19 DASLDNEDAEDDPELEAIKERVKAMEAEAEKLKELQSEVESQMSMGDAGSASMGSANFPT 78
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
L EEK +AD RSIY+G VDY +TAEELE HFHGCG++NRVTI+C+K+ G PKGFAYIEF
Sbjct: 79 L--EEKVDADNRSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKGFAYIEF 136
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
+K+SV A+A+D S+FR RQIKV PKRTN+PG+S+T+
Sbjct: 137 TEKESVDAAIALDGSMFRDRQIKVMPKRTNKPGVSSTD 174
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 124/169 (73%), Gaps = 8/169 (4%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
++ EL A+KA+VREME+E E L++LQ++ S +S + EEK EAD RSI
Sbjct: 90 EDPELEAIKAKVREMEQE-EWLQELQAKSLLLSS-----DSGLAFHRMTEEKVEADQRSI 143
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYG TAE+LESHF+ CG +NRVTILC+KF GHPKG+AYIEFADK SV+ AM +DE
Sbjct: 144 YVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKGYAYIEFADKSSVKVAMELDE 203
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYGGYR 201
S+FR R IKV PKRTN PGISTT+RGG RGR GRG + R A G R
Sbjct: 204 SVFRDRVIKVLPKRTNMPGISTTDRGGSRGRFHGRGALPRRAGFNGAQR 252
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 136/200 (68%), Gaps = 19/200 (9%)
Query: 17 NGDHIENGDMEADQS-----KCTDE----AELAAMKARVREMEEEAEKLKQLQSEVDKQ- 66
+GDH + D D++ TDE AEL A+K R +E+E +A KL L+ +DK
Sbjct: 7 DGDHDVHEDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSP 66
Query: 67 ----MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVT 122
++ S SNN NLS E+K E DLRS+YVGNVDYG+TA+ELE+HF GCG +NRVT
Sbjct: 67 ISTFRNLFSAAESNNS-NLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVT 125
Query: 123 ILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
ILCNKF GHPKGFAYIEF +D+V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P
Sbjct: 126 ILCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PP 184
Query: 183 RGRGRGRVSRGAAMYGGYRP 202
RGR +RG M G+RP
Sbjct: 185 FVRGR---ARGRGMSIGFRP 201
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 114/148 (77%), Gaps = 11/148 (7%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSP----PNSNNLLNLSIEEKKEAD 90
D+ E+ A+KARV+EMEEEAEKLK++Q E + S+ SP P+S L E++ D
Sbjct: 37 DDPEIEAIKARVKEMEEEAEKLKEMQKEAES--SLMSPQHAVPSS-----LPGEDQASID 89
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDY ATA ELE HFHGCGSVNRVTILC+KF GHPKGFAY+EF DKDSV+ A+
Sbjct: 90 CRSVYVGNVDYSATASELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFGDKDSVENAV 149
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTN 178
+ +SLF+GRQIKV KRTN PGISTTN
Sbjct: 150 QLSDSLFKGRQIKVTAKRTNVPGISTTN 177
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL-SIEEKKEADLRS 93
D+A+L+A++ + E+EEE +KLK +Q+E+ M++ + SN+ +L + EEK EAD +S
Sbjct: 20 DDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKS 79
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGATAEE+E HFHGCGSV RVTILC+KF GHPKGFAY+EF +KD +Q A+AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMT 139
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNR 179
+SL RGRQIKV+PKRTNRPG+STTNR
Sbjct: 140 DSLLRGRQIKVDPKRTNRPGLSTTNR 165
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 126/184 (68%), Gaps = 23/184 (12%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ EE + + GD E D+ D+ EL A++ RVREMEEEAE+LK L E DK +
Sbjct: 5 VSEEPSLDKGDGAEECDL--------DDPELKAIRMRVREMEEEAERLKGLSGE-DKSIG 55
Query: 69 MGSPPNSNNLLN--------------LSIEEKKEADLRSIYVGNVDYGATAEELESHFHG 114
+ S P + + LS EEKKE D RS+YVGNVDYG TA++LE+HF
Sbjct: 56 VSSRPCMKLIHSKMTAGAYTEGPPRPLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSS 115
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
CGS+NR+TILC+KF GHPKG+AYIEFA+++SV A+AMDE++FRGR IKV PKRTN PGI
Sbjct: 116 CGSINRITILCDKFSGHPKGYAYIEFAERNSVDVAVAMDETVFRGRTIKVLPKRTNMPGI 175
Query: 175 STTN 178
STT+
Sbjct: 176 STTD 179
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 128/180 (71%), Gaps = 7/180 (3%)
Query: 27 EADQSKCTDEAELAAMKARVRE--MEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE 84
EA ++ EL A+KARV+E MEE+ E+LK+ + D + M S P N++ E
Sbjct: 14 EAMSGHINEDPELMAIKARVQELEMEEQTERLKE-EERCDAE-EMLSSPQPGPFYNMTPE 71
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
E+ +AD RS+YVGNVDYGATA+ELE HF+GCG VNRVTILC++F GHPKGFAYIEF+D+
Sbjct: 72 ERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRS 131
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG---RGRGRVSRGAAMYGGYR 201
+ Q+A+ + E++FRGR +KV PKRTN PGISTT+RGG RG RGRG R G+R
Sbjct: 132 AAQSAVGLHETMFRGRVLKVLPKRTNMPGISTTDRGGHRGSHSRGRGSGHRPPRYQNGFR 191
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL-SIEEKKEADLRS 93
D A+L+A++ + E+EEE EKLK +Q+E+ M++ + S++ +L + EEK EAD +S
Sbjct: 20 DNADLSAIEGDLNEIEEEQEKLKAIQNEMVGHMNLNTSSQSDSTQSLLTPEEKAEADAKS 79
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGATAEE+E HFHGCGSV RVTILC+KF HPKGFAY+EF +KD +Q A+AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFTEKDGMQNALAMT 139
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+SL RGRQIKV+ KR NRPG+STTNR RGRG
Sbjct: 140 DSLLRGRQIKVDQKRANRPGLSTTNRPPFRGRG 172
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL-SIEEKKEADLRS 93
D+A+L+A++ + E+EEE +KLK +Q+E+ M++ + SN+ +L + EEK EAD +S
Sbjct: 20 DDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKS 79
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGATAEE+E HFHGCGSV RVTILC+KF GHPKGFAY+EF +KD +Q A+AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMT 139
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNR 179
+SL RGRQIKV+PKRTNRPG+S+TNR
Sbjct: 140 DSLLRGRQIKVDPKRTNRPGLSSTNR 165
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 124/176 (70%), Gaps = 19/176 (10%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS----IEEKKEADLRS 93
EL A+KARV+EME+E E+LK+L++E N L S I + E D RS
Sbjct: 1 ELEAIKARVQEMEKEDERLKKLEAE-------------NRFLLSSEAGLIPKTTEVDQRS 47
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYG+TAEELESHFH CG VNRVTILC+KF GHPKG+AYIEF +K SV+ A+ +D
Sbjct: 48 VYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFEEKSSVKAAVELD 107
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRGRVSRGAAMYGGYRPVRRAR 207
ES+FRGR IKV PKRTN PGIS+T+RGG RG + RG +S+ Y G +P R R
Sbjct: 108 ESVFRGRVIKVLPKRTNMPGISSTDRGGYRGCFQARGGLSQHGGYYRGQQPRVRGR 163
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 104/117 (88%)
Query: 51 EEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELES 110
EEAEKLK+LQ+E++KQM+M PP + + +SIEE+ E D RSIYVGNVDYGATAEELE+
Sbjct: 2 EEAEKLKELQNEIEKQMNMSPPPGNAGPVIMSIEERMETDARSIYVGNVDYGATAEELEA 61
Query: 111 HFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
HFHGCGSVN VTILC+KF GHPKGFAY++F+DK+SV+T++A+DESLFRGRQIKV PK
Sbjct: 62 HFHGCGSVNYVTILCDKFSGHPKGFAYMKFSDKESVRTSLALDESLFRGRQIKVIPK 118
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL-SIEEKKEADLRS 93
D+A+L+A++ + E+EEE +KLK +Q+E+ M++ + SN+ +L + EEK EAD +S
Sbjct: 20 DDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKS 79
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGATAEE+E HFHGCGSV RVTILC+KF GHPKGFAY+EF +KD +Q A+AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMT 139
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNR 179
+SL RGRQIKV+ KRTNRPG+STTNR
Sbjct: 140 DSLLRGRQIKVDQKRTNRPGLSTTNR 165
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 127/173 (73%), Gaps = 17/173 (9%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSE----VDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
L A+KARV+E+E E E + + E VD Q+ + S P S N++ EE+ +AD RSI
Sbjct: 4 LLAIKARVQELEMEEESERLKEEERCDAVDMQL-LTSSPQSGPFYNMTPEERIDADNRSI 62
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYGATA+ELE HF+GCG VNRVTILC++F GHPKGFAYIEF+D+DSVQ+A+ + E
Sbjct: 63 YVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDSVQSAIGLHE 122
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNRGGPRG---RGRGRVSRGAAMYGGYRPVR 204
+LFRGR +KV PKRTN PGISTT+RGG RG RGRGR GYRP R
Sbjct: 123 TLFRGRVLKVMPKRTNMPGISTTDRGGHRGAHSRGRGR---------GYRPPR 166
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 125/184 (67%), Gaps = 23/184 (12%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ EE + GD E ++ D+ EL A++ RVREMEEEAE+LK L + DK +
Sbjct: 5 VSEEPGLDKGDRAEECEL--------DDPELKAIRMRVREMEEEAERLKGLSGQ-DKSIG 55
Query: 69 MGSPPNSNNLLN--------------LSIEEKKEADLRSIYVGNVDYGATAEELESHFHG 114
+ + P + LS EEKKE D RS+YVGNVDYG+TA++LE+HF
Sbjct: 56 VSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS 115
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
CGS+NR+TILC+KF GHPKG+AYIEFA+++SV A+AMDE++FRGR IKV PKRTN PGI
Sbjct: 116 CGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
Query: 175 STTN 178
S+T+
Sbjct: 176 SSTD 179
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 124/184 (67%), Gaps = 23/184 (12%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ EE + GD E ++ D+ EL A++ RVREMEEEAE+LK L + DK +
Sbjct: 5 VSEEPGLDKGDGAEECEL--------DDPELKAIRMRVREMEEEAERLKGLSGQ-DKSIG 55
Query: 69 MGSPPNSNNL--------------LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHG 114
+ + P LS EEKKE D RS+YVGNVDYG+TA++LE+HF
Sbjct: 56 VSTRPCMQTTHSKMTAGAYTEGPPQTLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS 115
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
CGS+NR+TILC+KF GHPKG+AYIEFA+++SV A+AMDE++FRGR IKV PKRTN PGI
Sbjct: 116 CGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
Query: 175 STTN 178
S+T+
Sbjct: 176 SSTD 179
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 125/184 (67%), Gaps = 23/184 (12%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ EE + GD E ++ D+ EL A++ RVREMEEEAE+LK L + DK +
Sbjct: 5 VSEEPGLDKGDGAEECEL--------DDPELKAIRMRVREMEEEAERLKGLSGQ-DKSIG 55
Query: 69 MGSPPNSNNLLN--------------LSIEEKKEADLRSIYVGNVDYGATAEELESHFHG 114
+ + P + LS EEKKE D RS+YVGNVDYG+TA++LE+HF
Sbjct: 56 VSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS 115
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
CGS+NR+TILC+KF GHPKG+AYIEFA+++SV A+AMDE++FRGR IKV PKRTN PGI
Sbjct: 116 CGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
Query: 175 STTN 178
S+T+
Sbjct: 176 SSTD 179
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 107/130 (82%), Gaps = 4/130 (3%)
Query: 49 MEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEEL 108
MEEEAEKLK++Q +V+K S+ SPP ++ + EEK E D RS+YVGNVDY ATAEEL
Sbjct: 1 MEEEAEKLKEMQKQVEK--SIMSPPAASG--PKTFEEKAEVDARSVYVGNVDYSATAEEL 56
Query: 109 ESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
E HFHGCGSVNRVTILC+KF GHPKGFAY+EF+DKDSV A+ + +SLF+GRQIKV KR
Sbjct: 57 EQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFSDKDSVDNAVLLSDSLFKGRQIKVVLKR 116
Query: 169 TNRPGISTTN 178
TNRPG+S+T+
Sbjct: 117 TNRPGVSSTD 126
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 117/160 (73%), Gaps = 2/160 (1%)
Query: 41 AMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVD 100
A+K RV+ MEEEAEKLK LQSEV++Q++ N ++EEK E D RSIYVG V+
Sbjct: 41 AIKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFP--TMEEKMETDNRSIYVGQVE 98
Query: 101 YGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGR 160
Y TAEELE HFHGCG++NRVTI+C+KF GHPKGFAYIEF +K+SV ++A+D S+ GR
Sbjct: 99 YATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGR 158
Query: 161 QIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
QIKV PKRTNRPG+S+T+RGG G RG A Y Y
Sbjct: 159 QIKVMPKRTNRPGVSSTDRGGRGGFRGRGRGRGRAFYANY 198
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 117/160 (73%), Gaps = 2/160 (1%)
Query: 41 AMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVD 100
A+K RV+ MEEEAEKLK LQSEV++Q++ N ++EEK E D RSIYVG V+
Sbjct: 41 AIKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFP--TMEEKMETDNRSIYVGQVE 98
Query: 101 YGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGR 160
Y TAEELE HFHGCG++NRVTI+C+KF GHPKGFAYIEF +K+SV ++A+D S+ GR
Sbjct: 99 YATTAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGR 158
Query: 161 QIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
QIKV PKRTNRPG+S+T+RGG G RG A Y Y
Sbjct: 159 QIKVMPKRTNRPGVSSTDRGGRGGFRGRGRGRGRAFYANY 198
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 117/152 (76%), Gaps = 1/152 (0%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
+ E+ ++ R++EME EA+ ++ L SEV+KQM+ S++ + L+ EEK E D RS++
Sbjct: 32 DPEIEQIRERLKEMEREAQLIRNLHSEVEKQMTT-VLNESSSTIPLTTEEKIEVDSRSVF 90
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYGATAE+LE+HFHGCG++NRVTILC+++ G PKGFAY+EFADK+S Q ++AM ++
Sbjct: 91 VGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVEFADKESAQASLAMTDT 150
Query: 156 LFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
LFRGRQIKV KRTNRPG+ T P GR R
Sbjct: 151 LFRGRQIKVLEKRTNRPGMGNTRARRPYGRAR 182
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A+K ++ E+E+ E++K + S ++ L + +EK EAD RS+YVG
Sbjct: 102 ELEAIKIKIWELEKAHERMKACEEAAVVTDSFFLSTDAGALFPGTPKEKMEADNRSVYVG 161
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYG TAEELESHF+ CG +NRVTILC+KF GHPKG+AYIEFA + SV+ A+ +DES F
Sbjct: 162 NVDYGGTAEELESHFNSCGEINRVTILCDKFSGHPKGYAYIEFASESSVKAAVDLDESTF 221
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYGGYRPVRRAR 207
RGR IKV PKRTN PGIS+T+RGG RG GRG +S A +GG R R R
Sbjct: 222 RGRIIKVLPKRTNMPGISSTDRGGLRGHCIGRGALSHRATFHGGSRSRPRGR 273
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 125/185 (67%), Gaps = 25/185 (13%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ EE + GD E ++ D+ EL A++ RVREMEEEAE+LK L + DK +
Sbjct: 5 VSEEPGLDKGDGAEECEL--------DDPELKAIRMRVREMEEEAERLKGLSGQ-DKSIG 55
Query: 69 MGSPPNSNNLLN---------------LSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
+ SP L++ LS EEKKE D RS+YVGNVDYG TA++LE+HF
Sbjct: 56 V-SPRPCMKLIHSKMTAGEYTEGPPRPLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFS 114
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
CGS+NR+TILC+KF GHPKG+AYIEFA+++SV A+ MDE++FRGR IKV PKRTN PG
Sbjct: 115 SCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPG 174
Query: 174 ISTTN 178
IS+T+
Sbjct: 175 ISSTD 179
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 116/143 (81%), Gaps = 1/143 (0%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL-SIEEKKEADLRSIYV 96
+L+A++ + E+EEE +KLK +Q+E+ M++ + SN+ +L + EEK EAD +S+YV
Sbjct: 41 DLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKSVYV 100
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDYGATAEE+E HFHGCGSV RVTILC+KF GHPKGFAY+EF +KD +Q A+AM +SL
Sbjct: 101 GNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMTDSL 160
Query: 157 FRGRQIKVNPKRTNRPGISTTNR 179
RGRQIKV+ KRTNRPG+STTNR
Sbjct: 161 LRGRQIKVDQKRTNRPGLSTTNR 183
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 120/159 (75%), Gaps = 16/159 (10%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSM-----GSPPNSNNLLNLSIEEKKEADLR 92
E+ ++AR++EME+EA+ ++ L +EV+KQMS +PP L+ +EK EAD R
Sbjct: 11 EIEEIRARLKEMEKEAQLIRNLHTEVEKQMSTVLNESPTPPP------LTSDEKVEADSR 64
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S++VGNVDYGA AEELE+HFHGCG++NR+TILC+++ G PKGFAYIEFADK+S + ++AM
Sbjct: 65 SVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARASLAM 124
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
++LFRGRQIKV KRTNRPG+ G R R RGRV+
Sbjct: 125 TDTLFRGRQIKVVEKRTNRPGM-----GFNRRRMRGRVA 158
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/112 (75%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC++F GHPKGFAYIEF
Sbjct: 1 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKGFAYIEF 60
Query: 141 ADKDSVQ-TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
+DK + ++A+DESLFRG++IKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 61 SDKGVRRGPSLALDESLFRGKEIKVIPKRTNRPGISTTDRGFPRARYRARTT 112
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 118/172 (68%), Gaps = 14/172 (8%)
Query: 17 NGDHIENGDMEADQSKCTD---------EAELAAMKARVREMEEEAEKLKQLQSEVDKQM 67
+GDH + GD D++ D +AEL A+K R +E+E +A KL L+ DK
Sbjct: 7 DGDHEDQGDDFGDEASKEDISVSDDIQFDAELEAIKERFKEIEADANKLHDLRHLTDK-- 64
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
SP + +L LS E+K E DLRS+YVGNVDYGATA+ELE+HF CG +NRVTILCNK
Sbjct: 65 ---SPVSKTSLSVLSDEDKAEVDLRSVYVGNVDYGATADELEAHFRACGPINRVTILCNK 121
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
+ G PKGFAYIEF +D+V+ AMA+DES FR R +KV PKRTN PG+S TNR
Sbjct: 122 YTGQPKGFAYIEFDTRDAVEAAMALDESNFRNRALKVLPKRTNVPGMSMTNR 173
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSI-EEKKEADLRS 93
D+A+L+A++ + E+EEE +KLK +Q+E+ M++ + SN+ +L EEK EAD +S
Sbjct: 20 DDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKS 79
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGATAEE+E HFHGCGSV+RVTI C++F GHPKGFAY+EF +K+ +Q A+AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNR 179
+SL RGRQIKV+PKRTN+PG+STTNR
Sbjct: 140 DSLLRGRQIKVDPKRTNKPGMSTTNR 165
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 98/120 (81%), Gaps = 14/120 (11%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E++ EAD RS+YVGNVDY ATAEELE HFHGCGSVNRVTILC+KF GHPKGFAYIEF+
Sbjct: 1 TTEDRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 60
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--------------GGPRGRGR 187
DK+SV+TAMA+D+SLFRGRQIKV+PKRTNRPG+S+T+R GGPR R R
Sbjct: 61 DKESVKTAMALDDSLFRGRQIKVSPKRTNRPGVSSTDRGFRRGRRPFRHGGVGGPRRRSR 120
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 122/167 (73%), Gaps = 4/167 (2%)
Query: 13 ENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM-GS 71
EN ++E G+ D ++ ELAA+KARV+E+E E E + L+ E +M + S
Sbjct: 3 ENHSEYGYLEEGECAEDHYP--EDPELAAIKARVQELEMEEETER-LKDEDGPEMHLVTS 59
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
P+ N++ EE+ +AD RSIYVGNVDYGATA+ELE HF+ CG VNRVTILC++F GH
Sbjct: 60 SPHPAPFYNMTPEERIDADNRSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGH 119
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
PKGFAYIEF+D+DSVQ+A+ + E+LFRGR +KV PKRTN PGISTT+
Sbjct: 120 PKGFAYIEFSDRDSVQSAIGLHETLFRGRVLKVLPKRTNMPGISTTD 166
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 29/202 (14%)
Query: 35 DEAELAAMKARVREMEE--EAEKLKQLQSEVDKQ-------------MSMGSP----PNS 75
D EL A+K ++++MEE E ++LK ++ +Q + SP P +
Sbjct: 86 DGQELEAIKTKLQKMEEVHERQELKGMEETQHQQPQEEEKEVAEKASTPLLSPLQYNPEA 145
Query: 76 NNLLNL--------SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
++LLN + EK E+D RS+YVGNVDY TA+ELESHF CG +NRVTILC+K
Sbjct: 146 SHLLNPEKGTPFQGTAMEKVESDQRSVYVGNVDYSGTAKELESHFSCCGEINRVTILCDK 205
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR-- 185
+ GHPKG+AYIEFA +DSV+TA +DE+ FRGR IKV PKRTN PGISTTNRGGPR R
Sbjct: 206 YSGHPKGYAYIEFAHEDSVKTAAELDETTFRGRIIKVLPKRTNFPGISTTNRGGPRNRLS 265
Query: 186 GRGRVSRGAAMYGGYRPVRRAR 207
GRG ++Y G R R R
Sbjct: 266 GRGCPPLRCSLYFGDRLRPRGR 287
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 95/120 (79%), Gaps = 2/120 (1%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EAD RS+YVGNVDY TAEELESHF+ CG +NRVTILC+K+ GHPKG+AYIEFA KD
Sbjct: 162 EKLEADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCDKYSGHPKGYAYIEFAYKD 221
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYGGYRP 202
SV+TAM +DE+ FRGR IKV PKRTN PGISTT+RGG R R GRG ++Y G RP
Sbjct: 222 SVKTAMDLDETTFRGRIIKVLPKRTNLPGISTTDRGGLRSRLPGRGGTPHRYSLYIGDRP 281
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 12/159 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL A++A V EM+E +Q EV++Q P + +++ EE+ ++D RSIYVG
Sbjct: 19 ELDAVQACVLEMDE-----SDMQYEVERQFPYS--PEAELFFDMTHEERIDSDRRSIYVG 71
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGATA+ELE +F+ CG VNRVTI N+F GHPKGFAYIEF+D++SV+TAMA+DE+LF
Sbjct: 72 NVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRESVRTAMALDETLF 131
Query: 158 RGRQIKVNPKRTNRPGISTTN---RGGPRGRGRG-RVSR 192
RGR IKV+PKRTN PG STT+ RGG RGRG R SR
Sbjct: 132 RGRVIKVSPKRTNIPGFSTTDVYLRGG-WSRGRGVRASR 169
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 104/152 (68%), Gaps = 9/152 (5%)
Query: 25 DMEADQSKCTDE-AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSI 83
D AD + TDE AE+ AMK RV EME EA KL++LQ + G P
Sbjct: 35 DTTADVTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHPTE-------- 86
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
EE++E D RSIYVGNVDYGAT EE++ HF CG++NRVTILC+KF GHPKGFAY+EFA+
Sbjct: 87 EEREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEP 146
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
V AM ++ESLFRGR IKV KRTN PG+S
Sbjct: 147 SLVANAMVLNESLFRGRLIKVTAKRTNMPGLS 178
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 118/175 (67%), Gaps = 18/175 (10%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMS---MGSPPNSNNLLNLSIEEKKEA-DLRS 93
EL +MK RVREME EAEKL+++Q++V+K+M+ G P +EE KE D RS
Sbjct: 27 ELESMKQRVREMEFEAEKLREMQAQVEKEMNESGQGGHPAPVG----GMEENKEVVDSRS 82
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYG+TAEE+++HF CG++NR+TILC+KF G PKGFAYIEFAD V A ++
Sbjct: 83 VYVGNVDYGSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIEFADPMLVPQACLLN 142
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGG--------PRGRGRGRVSRGAAMYGGY 200
+SLFRGRQIKV PKRTN PG+S G P R RG RG MY G+
Sbjct: 143 DSLFRGRQIKVTPKRTNVPGLSRGRGRGRGRGRGFTPYFRPRG--IRGRGMYRGF 195
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 115/167 (68%), Gaps = 5/167 (2%)
Query: 10 HEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM 69
H E +F + +++EN + ++A++ AMK RV EME EA KL+++ ++ +S
Sbjct: 16 HREADFAH-EYLENDVANEGREADAEDADIEAMKRRVAEMEAEAAKLREMNEVAERDISG 74
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
+ S+ S EEK E D RSIYVGNVDYGAT EE++ HF CG++NRVTILC+KF
Sbjct: 75 TASAASHP----SEEEKMEVDGRSIYVGNVDYGATPEEIQQHFQSCGTINRVTILCDKFT 130
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST 176
GHPKGFAY+EFAD V+ A ++ESLFRGR +KV PKRTN PGI+T
Sbjct: 131 GHPKGFAYVEFADSSFVENAAVLNESLFRGRLLKVTPKRTNVPGITT 177
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 84/87 (96%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 2 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 61
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGI 174
T++A+DESLFRGRQIKV PKRTNRPGI
Sbjct: 62 TSLALDESLFRGRQIKVIPKRTNRPGI 88
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 6/169 (3%)
Query: 13 ENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSE---VDKQMSM 69
EN + D++E+ EA ++ EL A+KARV+E+E E E + + E + M
Sbjct: 3 ENHLDYDYLED---EAIDEHFAEDPELTAIKARVQELEMEEETERLKEDERCDAGEMQLM 59
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
P N++ EE+ +AD RS+YVGNVDYGATA+ELE HF+GCG VNRVTILC++F
Sbjct: 60 TCSPRPGPFYNMTPEERIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFS 119
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
GHPKGFAYIEF+D+DSV +A+ + E+LFRGR +KV PKRTN PGISTT+
Sbjct: 120 GHPKGFAYIEFSDRDSVNSAIGLHETLFRGRVLKVLPKRTNLPGISTTD 168
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 103/149 (69%), Gaps = 9/149 (6%)
Query: 28 ADQSKCTDE-AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEK 86
AD + TDE AE+ AMK RV EME EA KL++LQ + G P EE+
Sbjct: 41 ADGTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHPTE--------EER 92
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
+E D RSIYVGNVDYGAT EE++ HF CG++NRVTILC+KF GHPKGFAY+EFAD V
Sbjct: 93 EEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPSLV 152
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
AM ++ESLFRGR IKV KRTN PG++
Sbjct: 153 ANAMVLNESLFRGRLIKVTAKRTNMPGMA 181
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 84/87 (96%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+
Sbjct: 3 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 62
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGI 174
T++A+DESLFRGRQIKV PKRTNRPGI
Sbjct: 63 TSLALDESLFRGRQIKVIPKRTNRPGI 89
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 105/154 (68%), Gaps = 9/154 (5%)
Query: 23 NGDMEADQSKCTDE-AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
+G AD + TDE AE+ AMK RV EME EA KL++LQ + G P
Sbjct: 34 DGPSGADGTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHPTE------ 87
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
EE++E D RSIYVGNVDYGAT EEL+ HF CG++NRVTILC+KF GHPKG+AY+EFA
Sbjct: 88 --EEREEVDSRSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFA 145
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
D V AM ++ESLFRGR IK+ KRTN PG++
Sbjct: 146 DPSLVANAMVLNESLFRGRLIKITAKRTNMPGMA 179
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 121/190 (63%), Gaps = 14/190 (7%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCT--DEAELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
+ E+EN + N ++EA + K ++AE RV++ EE E Q
Sbjct: 71 LLEQENLAECP-LPNQELEAIKMKVCAMEQAEGTPRPPRVQQQAEEEEGTAAGQ------ 123
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
+ SP L+ + EEK EAD RS+YVGNVDYG +AEELE+HF CG V+RVTILC+
Sbjct: 124 --LLSPETVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCD 181
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
KF GHPKG+AYIEFA K SVQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG
Sbjct: 182 KFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHP 241
Query: 187 RGRVSRGAAM 196
SRGA
Sbjct: 242 G---SRGAPF 248
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 114/166 (68%), Gaps = 10/166 (6%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP L+ + EEK EAD
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEAD 145
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K SVQ A+
Sbjct: 146 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAV 205
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
+D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 206 ELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPG---SRGAPF 248
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 114/166 (68%), Gaps = 10/166 (6%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP + L + EEK EAD
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETTGCRLPGTPEEKVEAD 145
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K SVQ A+
Sbjct: 146 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAV 205
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
+D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 206 ELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPG---SRGAPF 248
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 114/166 (68%), Gaps = 10/166 (6%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP + L + EEK EAD
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETTGCRLPGTPEEKVEAD 145
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K SVQ A+
Sbjct: 146 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAV 205
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
+D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 206 ELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPG---SRGAPF 248
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 114/166 (68%), Gaps = 10/166 (6%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP L+ + EEK EAD
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEAD 145
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K SVQ A+
Sbjct: 146 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAV 205
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
+D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 206 ELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPG---SRGAPF 248
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
SP + L + EEK EAD RS+YVGNVDYG +AEELE+HF GCG V+RVTILC+KF G
Sbjct: 139 SPEATGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSG 198
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 190
HPKG+AYIEFA K SVQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG
Sbjct: 199 HPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGH---PG 255
Query: 191 SRGAAM 196
SRGA
Sbjct: 256 SRGAPF 261
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 102/139 (73%), Gaps = 6/139 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQS--EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ MK RV EME EA+KL++LQ+ E D Q G + + ++E+K+ AD RS+Y
Sbjct: 31 EIQLMKQRVEEMEREAKKLRELQAAAETDDQSGEGGSGEAMD----TLEDKQAADSRSVY 86
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYGAT EE+++HF CG++NRVTILC+KF GHPKGFAY+EFA+ D + A+AMD S
Sbjct: 87 VGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDFIDAALAMDNS 146
Query: 156 LFRGRQIKVNPKRTNRPGI 174
LFRGR IKV KRTN PG
Sbjct: 147 LFRGRLIKVTAKRTNIPGF 165
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP L + EEK EAD
Sbjct: 83 ELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTAAGQLLSPETMGCPLPGTPEEKVEAD 142
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K SVQ A+
Sbjct: 143 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAV 202
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
+D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 203 ELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPG---SRGAPF 245
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 6/139 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMS-MGSPPNSNNLLNLSIEEKKEA-DLRSIY 95
EL +MK RVREME EAEKL+++Q++V+K+M+ G NN EE +EA D RS+Y
Sbjct: 1 ELESMKQRVREMEMEAEKLREMQAQVEKEMNEQGGGQEGNN----PTEEDREAVDSRSVY 56
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYG+TAEE+++HF CG++NR+TILC+KF G PKG+AYIEF+D V A +++S
Sbjct: 57 VGNVDYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQACQLNDS 116
Query: 156 LFRGRQIKVNPKRTNRPGI 174
LFRGRQIKV PKRTN PG
Sbjct: 117 LFRGRQIKVTPKRTNLPGF 135
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 113/158 (71%), Gaps = 18/158 (11%)
Query: 17 NGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN 76
+G E+GD EA+ E EL AMK RV EME EAEKL+++Q+++DK+ N+
Sbjct: 6 DGKQREDGDPEAE------EQELQAMKQRVAEMEAEAEKLREIQAKLDKE-------NAQ 52
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
L E K++ D RS+YVGNVDYGAT EE+++HF CG++NRVTILC+++ GHPKGFA
Sbjct: 53 LL-----ENKEDIDSRSVYVGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFA 107
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
YIEF++ V A+ ++ESLFRGR +KV PKRTN PG+
Sbjct: 108 YIEFSEPGLVPQALVLNESLFRGRLLKVVPKRTNLPGM 145
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 11/133 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ MK RV+EMEEEA KLK++Q+EV+K+M S + +K+E D RS+Y+G
Sbjct: 26 EIETMKKRVKEMEEEAAKLKEMQAEVEKEMGAQS-----------VSDKEEVDFRSVYIG 74
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY AT EE+++HF CG++NRVTILC+KF GHPKGFAY+EFAD SV A+ + ES+F
Sbjct: 75 NVDYSATPEEIQAHFQSCGTINRVTILCDKFTGHPKGFAYLEFADAGSVANAVVLSESMF 134
Query: 158 RGRQIKVNPKRTN 170
+GR IKV KRTN
Sbjct: 135 KGRLIKVTAKRTN 147
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 111/169 (65%), Gaps = 12/169 (7%)
Query: 38 ELAAMKARVREMEEEAEK--LKQLQSEVDKQMSMGS-------PPNSNNLLNLSIEEKKE 88
EL A++ ++ ME+ E L +Q V + G P + S +EK+E
Sbjct: 86 ELEAIRLKLWAMEQAGEPPGLPNIQGVVPGEEGTGIMLAGGLLSPETGLPFPESPQEKEE 145
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
D RSIYVGNVDYGATAEELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA SVQ
Sbjct: 146 VDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGYAYIEFAATTSVQA 205
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 197
A+ +DES+FR R IKV PKRTN PGIS+T+RGG RG +RG A Y
Sbjct: 206 AVKLDESVFRDRVIKVCPKRTNFPGISSTDRGGLRGH---PSARGGAFY 251
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 112/154 (72%), Gaps = 9/154 (5%)
Query: 19 DHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
D D + + + ++ +L A+K +V EMEEEA+KL+++Q++V++Q+ +
Sbjct: 30 DDAVQADYDEELAGAEEDPDLEAVKQKVAEMEEEAKKLREMQADVERQLGVA-------- 81
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
LS K++ D RS++VGNVDY +T EE+++HF CG+VNRVTIL +K+ GHPKGFAY+
Sbjct: 82 -GLSAASKEDIDARSVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYL 140
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
EFADKD+V AM++++++FRGRQ+KV PKRTN P
Sbjct: 141 EFADKDAVNNAMSLNDTVFRGRQLKVTPKRTNVP 174
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 106/138 (76%), Gaps = 7/138 (5%)
Query: 59 LQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSV 118
+Q EV++Q P + +++ EE+ ++D RSIYVGNVDYGATA+ELE +F+ CG V
Sbjct: 6 MQYEVERQFPYS--PEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHV 63
Query: 119 NRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
NRVTI N+F GHPKGFAYIEF+D++SV+TAMA+DE+LFRGR IKV+PKRTN PG STT+
Sbjct: 64 NRVTIPYNRFTGHPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNIPGFSTTD 123
Query: 179 ---RGGPRGRGRG-RVSR 192
RGG RGRG R SR
Sbjct: 124 VYLRGG-WSRGRGVRASR 140
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+ AMK RV EME EA KL+++Q+ +DKQ S NL E+K++ D RSI
Sbjct: 21 DEEEIEAMKQRVAEMESEAAKLREMQASLDKQ--------SENLR----EDKEDIDARSI 68
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 69 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 128
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
SLFRGR +KV PKRTN PG+S
Sbjct: 129 SLFRGRNLKVVPKRTNLPGMS 149
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 112/164 (68%), Gaps = 20/164 (12%)
Query: 19 DHIENGDMEADQSKCTDEA----ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
+++E D ++ DEA EL AMK R++EMEEEA +LK++Q + S P+
Sbjct: 11 NNVEKFDAATQEATYLDEADVDAELEAMKKRLQEMEEEANRLKEVQ-----EQSASEVPS 65
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
S +E D RS+YVGNVDYG+T EEL++HF CG++NRVTILC+KF GHPKG
Sbjct: 66 S-----------EEVDRRSVYVGNVDYGSTPEELQAHFKECGTINRVTILCDKFTGHPKG 114
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
FAYIEFA ++ A+ ++ESLFRGR +KV+ KRTN PGISTT+
Sbjct: 115 FAYIEFATEEGANNAVILNESLFRGRNLKVSIKRTNVPGISTTD 158
>gi|403260900|ref|XP_003922888.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 274
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 112/168 (66%), Gaps = 16/168 (9%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL---------SIEEKKE 88
EL A+K +V ME+ AE L+ + G+ + LL+L + EEK E
Sbjct: 84 ELEAIKMKVWAMEQ-AEGLR-WPPGAQRGEEEGA--VAGQLLSLETAGHPIPGTPEEKVE 139
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD RS+YVGNVDYG +AEELE+HF CG V RVTILC+KF GHPKG+AYIEFA K SVQ
Sbjct: 140 ADHRSVYVGNVDYGGSAEELEAHFSCCGKVYRVTILCDKFSGHPKGYAYIEFATKGSVQA 199
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG SRGA
Sbjct: 200 AVQLDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGH---PGSRGAPF 244
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 105/118 (88%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + + +SIEEK EAD RS
Sbjct: 99 IEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARS 158
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
IYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A
Sbjct: 159 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA 216
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/106 (72%), Positives = 89/106 (83%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
L + EEK EAD RS+YVGNVDYG +AEELE+HF GCG V+RVTILC+KF GHPKG+AYI
Sbjct: 3 LPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYI 62
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
EFA K SVQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG
Sbjct: 63 EFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRG 108
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 88/99 (88%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
LS EEKKE D RS+YVGNVDYG+TA++LE+HF CGS+NR+TILC+KF GHPKG+AYIEF
Sbjct: 26 LSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEF 85
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
A+++SV A+AMDE++FRGR IKV PKRTN PGIS+T+R
Sbjct: 86 AERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTDR 124
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 115/172 (66%), Gaps = 22/172 (12%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSE-----VDKQM----SMGSPPNSNNLLNLSIE 84
EL A+K +V ME+ + Q Q+E V +Q+ +MG P L + E
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTVARQLLSPETMGCP------LPGTPE 139
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EA RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG+AYIEFA K
Sbjct: 140 EKVEAXHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKR 199
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
SVQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG + SRGA
Sbjct: 200 SVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGH---QGSRGAPF 248
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+ AMK RV EME EA KL+++Q+ +DKQ S NL E+K++ D RSI
Sbjct: 21 DEEEIEAMKRRVAEMESEAAKLREMQASLDKQ--------SENLR----EDKEDIDARSI 68
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 69 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 128
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
SLFRGR +KV PKRTN PG+S
Sbjct: 129 SLFRGRNLKVVPKRTNLPGMS 149
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 24/168 (14%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ MK RV+EMEEEA KL++LQ + +K+ S P + +++ AD RS+YVG
Sbjct: 23 EIQMMKQRVKEMEEEAAKLRELQEQAEKEQSQSGP--------MDVDDPTAADSRSVYVG 74
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGAT EE+++HF CG +NRVTILC+KF GHPKG+AY+EF++ + V A+A+D SLF
Sbjct: 75 NVDYGATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAAVALDNSLF 134
Query: 158 RGRQIKVNPKRTNRPGISTTNRG----------------GPRGRGRGR 189
RGR +KV KRTN PG + P GRGRGR
Sbjct: 135 RGRLLKVTAKRTNIPGYNRGRGRGRGGYRGGFRGGYQGYTPYGRGRGR 182
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D RSI
Sbjct: 22 DEEEIAAMKKRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG+S
Sbjct: 130 SVFRGRNLKVVPKRTNLPGMS 150
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 2/141 (1%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEE-KKEADLRS 93
D E+ AMK RV EME+EA KL+++Q+E +K + GS + + + + E+ K AD RS
Sbjct: 25 DTKEILAMKQRVEEMEKEANKLREMQAEAEKAEN-GSATDGDTSVPMETEDDKAAADSRS 83
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGNVDY AT EE++ HF CG +NRVTILC+KF GHPKGFAY+EF + + V A+AMD
Sbjct: 84 IFVGNVDYAATPEEIQMHFQACGVINRVTILCDKFTGHPKGFAYVEFGEAEHVDAALAMD 143
Query: 154 ESLFRGRQIKVNPKRTNRPGI 174
SLFRGR IKV KRTN PG
Sbjct: 144 NSLFRGRLIKVTAKRTNIPGF 164
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D RSI
Sbjct: 22 DEEEIAAMKRRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG+S
Sbjct: 130 SVFRGRNLKVVPKRTNLPGMS 150
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 114/168 (67%), Gaps = 17/168 (10%)
Query: 27 EADQSKCTDEAELAAMKARVREMEE-EAEKLKQLQSEVDKQMSMGSPPNSNNLLNL---- 81
EADQ EL A+K ++ ME+ + + Q + ++ G+ P + LL+
Sbjct: 80 EADQ-------ELEAIKVKLWAMEQAQGPEPPGAQGQAGREEGAGATP-AGQLLSPEAGC 131
Query: 82 ----SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
E+ E+D RS+YVGNVDYG TAEELE++F+ CG V+RVTILC+KF GHPKG+AY
Sbjct: 132 TCPGPPTEQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAY 191
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR 185
IEFA + S Q A+A+D+S+FRGR IKV PKRTN PGIS+T+RGG RGR
Sbjct: 192 IEFAAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGISSTDRGGFRGR 239
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D RS+
Sbjct: 22 DEEEIAAMKKRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDARSV 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG+S
Sbjct: 130 SVFRGRNLKVVPKRTNLPGMS 150
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 93/117 (79%), Gaps = 2/117 (1%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EAD RSIYVGNVDYG TA+ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA +
Sbjct: 134 EKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATES 193
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYR 201
S Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG +
Sbjct: 194 SAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGGLQ 248
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 104/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+ AMK RV EME EA KL+++Q+ +DKQ S NL E+K++ D RSI
Sbjct: 21 DEEEIEAMKRRVAEMESEAAKLREMQASLDKQ--------SENLR----EDKEDIDARSI 68
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 69 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 128
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG+S
Sbjct: 129 SVFRGRNLKVVPKRTNLPGMS 149
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL---SIEEKKEADLRSI 94
EL A+K ++ ME + ++Q+ + + + G+ + LL+ S EK EAD RSI
Sbjct: 84 ELEAIKLKLWAMEPGXPEPPRVQNLDEGEEATGAL-LARQLLSPETDSPLEKAEADHRSI 142
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYG TA+ELE++F+ CG +++VTILC+KF GHPKG+AYIEFA + S Q A+ +D+
Sbjct: 143 YVGNVDYGGTAQELEAYFNHCGEIHQVTILCDKFSGHPKGYAYIEFATESSAQAAVELDK 202
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYR 201
S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG +
Sbjct: 203 SIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGGLQ 247
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQS--------EVDKQMSMGSPPNSNNLLNLSIEEKKEA 89
EL A++ ++ ME+ A++ +L S E + SP + + EA
Sbjct: 81 ELEAIRLKLWTMEQ-AQRAPELPSTQAEAKEEEGAAARQLLSPKTVGCPFPGVLRQTVEA 139
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RSIYVGNVDYG TAEELE+HFH CG V+RVTILC+KF GHPKG+AY+EFA + S Q A
Sbjct: 140 DHRSIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVEFATQRSAQAA 199
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 190
+ +DES+FRGR +KV PKRTN PGIS+T+RGG RG RV
Sbjct: 200 VELDESIFRGRALKVLPKRTNFPGISSTDRGGLRGHLGTRV 240
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 106/150 (70%), Gaps = 6/150 (4%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE 84
D+E ++SK E+ MK RV EME EA KL++LQ+ + Q G +++ + +
Sbjct: 21 DVEEEESK-----EILLMKQRVEEMEREANKLRELQAAAENQEHEGGASDASVPMETE-D 74
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
E+ +AD RSI++GNVDY +T EE++ HF CG++NRVTILC+KF GHPKGFAY+EFA+ +
Sbjct: 75 ERAQADQRSIFIGNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPE 134
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
S+ TA+AMD SLFRGR IKV KRTN G
Sbjct: 135 SIDTALAMDNSLFRGRLIKVTSKRTNIHGF 164
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 11/166 (6%)
Query: 29 DQSKC-TDEAELAAMKARVREMEEEAEKLK--QLQSEVDKQMSMGSP-------PNSNNL 78
D ++C + EL A+K ++ ME+ A+ L+ ++Q++ ++ G+ P +
Sbjct: 68 DLAECPVPDQELEAIKLKLWAMEQ-AQGLEPPRVQAQAREEAGTGTTLAGQLLSPKTGCP 126
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
+ EK +AD RSIYVGNVDYG TAEELE++F+ CG + RVTILC+KF GHPKG+AYI
Sbjct: 127 SPGTPTEKVQADHRSIYVGNVDYGGTAEELEAYFNQCGEIRRVTILCDKFSGHPKGYAYI 186
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
EFA + + QTA+ +DES+FRGR IKV PKRTN PGIS+T+RGG RG
Sbjct: 187 EFATESAAQTAVELDESIFRGRVIKVLPKRTNLPGISSTDRGGLRG 232
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
D+ E+ MK RV EME EA KL++LQ+ +K + S P + + EEK D RSI
Sbjct: 23 DDPEILLMKQRVEEMEREATKLRELQAAAEK--AERSTPTGDQPMETE-EEKAATDSRSI 79
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDY AT EE++ HF CG++NRVTILC+KF GHPKG+AY+EF++ + V A++MD
Sbjct: 80 YVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFSETEHVDAALSMDN 139
Query: 155 SLFRGRQIKVNPKRTNRPGI 174
SLFRGR IKV KRTN PG
Sbjct: 140 SLFRGRLIKVTAKRTNIPGF 159
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 108/159 (67%), Gaps = 12/159 (7%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSI---------E 84
E EL A++ ++ ME+ AE+ + V Q G+ + +L I E
Sbjct: 79 VPEQELEAIRLKLCAMEQ-AEQPELPGVPVRAQEEEGT--RAGQMLRPKIPGCPFPGNPE 135
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EAD RSIYVGNVDYG TAEELE+HF+ CG ++RVTILC+KF GHPKG+AYIEFA K
Sbjct: 136 EKMEADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCDKFSGHPKGYAYIEFATKS 195
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
S Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 196 SAQAAVELDDSVFRGRVIKVLPKRTNFPGISSTDRGGLR 234
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 15/136 (11%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEA-DLRSIYV 96
EL AMK RV++ME EA KL+ +Q+EV+K M EE KEA D RS+YV
Sbjct: 38 ELEAMKQRVKDMENEAAKLRDMQAEVEKSMH--------------PEEDKEAVDSRSVYV 83
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDYGA+ EEL++HF CG++NRVTILC+KF GHPKG+AY+EFA+ V A+++D SL
Sbjct: 84 GNVDYGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPSFVNAAVSLDNSL 143
Query: 157 FRGRQIKVNPKRTNRP 172
FR R +KV+PKRTN P
Sbjct: 144 FRARLLKVSPKRTNVP 159
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 101/143 (70%), Gaps = 12/143 (8%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
CT + E++AMK RV EMEEEA KL+++Q+ +D Q LS E + + D R
Sbjct: 46 CTQQ-EISAMKKRVAEMEEEAAKLREMQASLDSQSQ-----------ELSTESRDDVDSR 93
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKGFAY+EF + V A+ +
Sbjct: 94 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVL 153
Query: 153 DESLFRGRQIKVNPKRTNRPGIS 175
+ES+F+GR IKV+PKRTN PG+S
Sbjct: 154 NESVFKGRNIKVSPKRTNYPGMS 176
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 99/140 (70%), Gaps = 6/140 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDK--QMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ MK RV EME EA KL++LQ+ +K Q + G + + E+K AD RSIY
Sbjct: 1 EILLMKQRVEEMEREANKLRELQAAAEKAEQGAQGG----EQVPMETEEDKAAADARSIY 56
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDY AT EE++ HF CG++NRVTILC+KF GHPKG+AY+EFA+ + + A+AMD S
Sbjct: 57 VGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMDNS 116
Query: 156 LFRGRQIKVNPKRTNRPGIS 175
LFRGR IKV PKRTN PG +
Sbjct: 117 LFRGRLIKVTPKRTNIPGFN 136
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 97/129 (75%), Gaps = 8/129 (6%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
EK EAD RSIYVGNVDYG TA+ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA +
Sbjct: 134 EKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATES 193
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG----- 199
S Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ Y G
Sbjct: 194 SAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYSGLQGGA 251
Query: 200 -YRPVRRAR 207
+RP R+R
Sbjct: 252 RFRPRGRSR 260
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 12/155 (7%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
I + +E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L
Sbjct: 83 ITDERLETHEKPGDEEEEIAAMKKRVAEMESEAAKLREMQASLDQQ--------SESLR- 133
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
E+K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF
Sbjct: 134 ---EDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEF 190
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+ V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 191 TEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGMA 225
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 12/155 (7%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
+ N +E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L
Sbjct: 7 VANERLETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQ--------SESLR- 57
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
E+K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF
Sbjct: 58 ---EDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEF 114
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+ V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 115 TEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGMT 149
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 99/141 (70%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+ AMK RV+EME EA KL+++Q+ +D Q E K++ D RS+
Sbjct: 46 DEEEITAMKKRVQEMEAEAAKLREMQASLDSQTETLR------------ENKEDIDARSV 93
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF + V A+ ++E
Sbjct: 94 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNE 153
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR IKV PKRTN PG+S
Sbjct: 154 SVFRGRNIKVVPKRTNLPGMS 174
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 92/131 (70%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK RV EME EA KL++LQ+ +K GS P + + E+K AD RSI+VGNVDY
Sbjct: 32 MKQRVEEMEREANKLRELQAAAEKAERSGSEPGDTGVPMETEEDKAAADSRSIFVGNVDY 91
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
AT EE++ HF CG +NRVTILC+KF GHPKG+AY+EFA+ + V A AMD SLFRGR
Sbjct: 92 SATPEEIQVHFQSCGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAATAMDNSLFRGRL 151
Query: 162 IKVNPKRTNRP 172
IKV KRTN P
Sbjct: 152 IKVTAKRTNVP 162
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 112/157 (71%), Gaps = 5/157 (3%)
Query: 38 ELAAMKARVREMEE-EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE---EKKEADLRS 93
EL A++ ++ ME+ + +L ++Q ++D+ + LL+ + EK EAD RS
Sbjct: 84 ELEAIRLKLWAMEQAQGPELPRVQ-DLDEGEEAAGALLARQLLSPKTDSPLEKAEADHRS 142
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYG TA+ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA + S Q A+ +D
Sbjct: 143 VYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELD 202
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 190
+S+FRGR IKV PKRTN PGIS+T+RGG RG RV
Sbjct: 203 KSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV 239
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D RS++VG
Sbjct: 28 EIAAMKKRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDARSVFVG 75
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++ES+F
Sbjct: 76 NVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVF 135
Query: 158 RGRQIKVNPKRTNRPGIS 175
RGR +KV PKRTN PG+S
Sbjct: 136 RGRNLKVVPKRTNLPGMS 153
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 106/150 (70%), Gaps = 12/150 (8%)
Query: 26 MEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEE 85
M A + +E E++AMK RV EMEEEA KL+++Q+ +D+Q S ++
Sbjct: 13 MAAGDDETNEEEEISAMKRRVAEMEEEAAKLREMQASLDQQSSEMH------------DD 60
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + S
Sbjct: 61 KEDIDSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPAS 120
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
V A+ ++ESLFRGR +KV+PKRTN PG++
Sbjct: 121 VAQALVLNESLFRGRNLKVDPKRTNIPGMT 150
>gi|349603101|gb|AEP99036.1| Polyadenylate-binding protein 2-like protein, partial [Equus
caballus]
Length = 113
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 81/88 (92%)
Query: 104 TAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIK 163
TAEELE+HFHGCGSVNRVTILC+KF GHPKGFAYIEF+DK+SV+T++A+DESLFRGRQIK
Sbjct: 1 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIK 60
Query: 164 VNPKRTNRPGISTTNRGGPRGRGRGRVS 191
V PKRTNRPGISTT+RG PR R R R +
Sbjct: 61 VIPKRTNRPGISTTDRGFPRARYRARTT 88
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 114/163 (69%), Gaps = 17/163 (10%)
Query: 13 ENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSP 72
+N + +HI+ + AD DE E++AMK RV EME EA KL+++Q+ +DK+
Sbjct: 3 DNQKEAEHIDVHEEGAD-----DEEEISAMKRRVAEMEAEAAKLREMQATLDKE------ 51
Query: 73 PNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHP 132
+N L E+K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHP
Sbjct: 52 --TNELR----EDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHP 105
Query: 133 KGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
KG+AY+EF + V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 106 KGYAYVEFTEPSLVAQALVLNESVFRGRSLKVVPKRTNLPGMN 148
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 12/155 (7%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
I + +E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L
Sbjct: 7 ITDERLETHEKPGDEEEEIAAMKKRVAEMESEAAKLREMQASLDQQ--------SESLR- 57
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
E+K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF
Sbjct: 58 ---EDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEF 114
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+ V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 115 TEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGMA 149
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 116/171 (67%), Gaps = 13/171 (7%)
Query: 5 ENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVD 64
EN+ + ++EN N D + + + + E E++AMK RV EMEEEA KL+++Q+ ++
Sbjct: 17 ENNSVADDEN--NHDEVRKDNKPSTALRLRVEEEISAMKRRVAEMEEEAAKLREMQASLN 74
Query: 65 KQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
+Q +L+ ++K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL
Sbjct: 75 QQAQ-----------DLNTDDKQDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTIL 123
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+KF G PKG+AY+EF + V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 124 LDKFTGQPKGYAYVEFTEPSLVAQALVLNESIFKGRNIKVVPKRTNVPGMS 174
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE ++AAMK RV EME EA KL+++Q +D + S +L E+K++ D RSI
Sbjct: 22 DEEDIAAMKKRVAEMESEAAKLREMQQTLDAE--------SESLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG++
Sbjct: 130 SVFRGRNLKVTPKRTNVPGMA 150
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 12/155 (7%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
I + +E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L
Sbjct: 7 IADERLETHEKPGDEEEEIAAMKRRVAEMESEAAKLREMQASLDQQ--------SESLR- 57
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
E+K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF
Sbjct: 58 ---EDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEF 114
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+ V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 115 TEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGMT 149
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 102/137 (74%), Gaps = 12/137 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV EME EA KL+++Q+ VD Q ++NL E K++ D RSI+VGN
Sbjct: 28 IAAMKKRVEEMEAEAAKLREMQASVDAQ--------TDNLR----ESKEDIDSRSIFVGN 75
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ + V A+ ++ES+FR
Sbjct: 76 VDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNESVFR 135
Query: 159 GRQIKVNPKRTNRPGIS 175
GR IKV PKRTN PG++
Sbjct: 136 GRNIKVVPKRTNLPGMT 152
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 103/139 (74%), Gaps = 12/139 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+AAMK RV EME EA KL+++Q+ +D+Q S +L E+K+E D RSI+VG
Sbjct: 50 EIAAMKRRVAEMESEAAKLREMQATLDQQ--------SESLR----EDKEEIDARSIFVG 97
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++ES+F
Sbjct: 98 NVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVF 157
Query: 158 RGRQIKVNPKRTNRPGIST 176
RGR +KV PKRTN PG+S+
Sbjct: 158 RGRNLKVVPKRTNLPGMSS 176
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 105/140 (75%), Gaps = 12/140 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK R+ EME EA+KL+++Q+ +DK+ ++NL E+K+E D RSI
Sbjct: 22 DEEEISAMKKRMAEMEAEAQKLREMQANLDKE--------NDNLK----EDKEEIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGI 174
S+FRGR +KV PKRTN PG+
Sbjct: 130 SIFRGRALKVVPKRTNIPGM 149
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 98/138 (71%), Gaps = 11/138 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E++AMK RV EMEEEA KL+++Q+ +D Q LS E + + D RSI+VG
Sbjct: 30 EISAMKKRVAEMEEEAAKLREMQASLDSQSQ-----------ELSTESRDDVDSRSIFVG 78
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CGS+NRVTIL +KF G PKGFAY+EF + V A+ ++ES+F
Sbjct: 79 NVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVF 138
Query: 158 RGRQIKVNPKRTNRPGIS 175
+GR IKV+PKRTN PG+S
Sbjct: 139 KGRNIKVSPKRTNYPGMS 156
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE ++AAMK RV EME EA KL+++Q +D + S +L E+K++ D RSI
Sbjct: 22 DEEDIAAMKKRVAEMESEAAKLREMQQTLDAE--------SESLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EFA+ V A+ ++E
Sbjct: 70 FVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FRGR +KV PKRTN PG++
Sbjct: 130 SVFRGRNLKVTPKRTNVPGMA 150
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE---EKKEADLR 92
+AE+ MK RV+EMEEEA KL ++QSEV+ QM + N + + + D
Sbjct: 19 DAEIEDMKRRVKEMEEEAAKLSEMQSEVESQMGKNTASTLNEMGAAGAAASAQPVQMDDT 78
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SIY+G VDYG+T EEL++ F CG++NRVTILC+KF G PKG+AYIEFA +D+V++A+ +
Sbjct: 79 SIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLL 138
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGG 181
++++FRGRQ+KV PKR N G + T RGG
Sbjct: 139 NDTMFRGRQLKVTPKRQNVRGFNMT-RGG 166
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
SLFRGR IKV PKRTN PG++
Sbjct: 130 SLFRGRNIKVVPKRTNLPGMT 150
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV EME EA KL+++Q+ +D+Q S +L E+K+E D RSI+VGN
Sbjct: 26 IAAMKRRVAEMESEAAKLREMQATLDQQ--------SESLR----EDKEEIDARSIFVGN 73
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++ES+FR
Sbjct: 74 VDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFR 133
Query: 159 GRQIKVNPKRTNRPGIST 176
GR +KV PKRTN PG+S+
Sbjct: 134 GRNLKVVPKRTNLPGMSS 151
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 107/157 (68%), Gaps = 14/157 (8%)
Query: 19 DHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
+ I+ + A + DE E+ AMK RV EME EA KL+++Q+++D+Q
Sbjct: 10 EEIKGEKVPAQEDGVDDEEEIEAMKRRVAEMESEAAKLREMQADLDQQTE---------- 59
Query: 79 LNLSIEEKKE-ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
S++E KE D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY
Sbjct: 60 ---SLQENKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAY 116
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+EFA+ V A+ ++ES+FRGR +KV PKRTN PG+
Sbjct: 117 VEFAEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 153
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 11/158 (6%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS---------MGSPPNSNNLLNLSIEE 85
D+ EL A+K ++ ME AE L + Q V ++ + + SP + +E
Sbjct: 86 DQQELEAIKLKLWAMEH-AETLPE-QPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKE 143
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
K EAD RS+YVGNVDYG +A EL ++F CG ++RVTILC+KF GHPKG+AYIEFA ++S
Sbjct: 144 KVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNS 203
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
VQ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 204 VQAAVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 241
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 125/200 (62%), Gaps = 23/200 (11%)
Query: 9 IHEEENFENGDHI-ENGDME---ADQSKCTDEA----ELAAMKARVREMEEEAEKLKQLQ 60
+ EEE+ G I E+GDM+ D + D+A EL MK R++EMEEEA L+ +Q
Sbjct: 1 MDEEEHEVYGQEIPEDGDMDGADVDMASGGDDAAKLQELDQMKRRLKEMEEEAAALRDMQ 60
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G PP + + + E K++ D RS+YVGNVDY T EE++ HF CG+VNR
Sbjct: 61 AKVAKEMQ-GGPPGGDPSAS-TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNR 118
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 119 VTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------ 171
Query: 181 GPRGRGRGRVSRGAAMYGGY 200
+ R RG Y GY
Sbjct: 172 ------KQRPPRGYNPYHGY 185
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 104/142 (73%), Gaps = 13/142 (9%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG-SPPNSNNLLNLSIEEKKEAD 90
+ TDE + + +K +V++M+EEAEKL+++Q EV+ QM SP NS ++ D
Sbjct: 30 QATDE-DFSDLKRQVQQMQEEAEKLEEIQKEVEAQMGTSPSPANSQSI-----------D 77
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDY T +EL++HF CG +NR+TILC+KF GHPKG+AYIEF+++D+V A+
Sbjct: 78 ARSVYVGNVDYAVTPQELQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDAVGNAV 137
Query: 151 AMDESLFRGRQIKVNPKRTNRP 172
+++++ GRQIKVNPKRTN P
Sbjct: 138 LLNDTVVHGRQIKVNPKRTNVP 159
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 15/202 (7%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQ 60
M+D+E+ +E + E+ DM A + EL MK R++EMEEEA L+++Q
Sbjct: 1 MADEEHEVYGQEIPLDG----EDVDMGAPGDEAAKMQELDEMKRRLKEMEEEANALREMQ 56
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G PN++ S E K+E D RS+YVGNVDY T EE++ HF+ CG+VNR
Sbjct: 57 TKVAKEMQ-GLDPNAS-----SSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNR 110
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF + ++VQ A+ ++ES GRQIKV PKRTN PG+ RG
Sbjct: 111 VTILTDKF-GQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQP-RG 168
Query: 181 GPRGRGRGRVSR--GAAMYGGY 200
G RG G R GA Y Y
Sbjct: 169 G-RGFGGHPYMRPYGAPFYNPY 189
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 110/171 (64%), Gaps = 22/171 (12%)
Query: 5 ENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVD 64
E I EE E H E+G DE E+ AMK RV EME EA KL+++Q+++D
Sbjct: 4 EGQAIPEEIKGEQIPHQEDG--------ADDEEEIEAMKRRVAEMESEAAKLREMQADLD 55
Query: 65 KQMSMGSPPNSNNLLNLSIEEKKE-ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
+Q S++E KE D RSI+VGNVDYGA+ EE+++HF CGS+NRVTI
Sbjct: 56 QQSE-------------SLQENKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTI 102
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
L +KF G PKG+AY+EFA+ V A+ ++ES+FRGR +KV PKRTN PG+
Sbjct: 103 LLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 153
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 123/200 (61%), Gaps = 27/200 (13%)
Query: 9 IHEEENFENGDHI-ENGDME---ADQSKCTDEA----ELAAMKARVREMEEEAEKLKQLQ 60
+ EEE+ G I E+GDM+ D + D+A EL MK R++EMEEEA L+ +Q
Sbjct: 1 MDEEEHEVYGQEIPEDGDMDGADVDMASGGDDAAKLQELDQMKRRLKEMEEEAAALRDMQ 60
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G P S + E K++ D RS+YVGNVDY T EE++ HF CG+VNR
Sbjct: 61 AKVAKEMQGGDPSAS------TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNR 114
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 115 VTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------ 167
Query: 181 GPRGRGRGRVSRGAAMYGGY 200
+ R RG Y GY
Sbjct: 168 ------KQRPPRGYNPYHGY 181
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 101/137 (73%), Gaps = 12/137 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV EME EA KL++LQ+ +D Q ++NL E K++ D RS++VGN
Sbjct: 33 IAAMKKRVEEMEAEAAKLRELQANIDSQ--------ADNLR----ENKEDIDARSVFVGN 80
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ + V A+ +++S FR
Sbjct: 81 VDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPALVLNDSTFR 140
Query: 159 GRQIKVNPKRTNRPGIS 175
GR IKV PKRTN PG++
Sbjct: 141 GRAIKVVPKRTNLPGMT 157
>gi|260784963|ref|XP_002587533.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
gi|229272681|gb|EEN43544.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
Length = 100
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 77/80 (96%)
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGATAEELE+HFHGCGS+NRVTILC+KF GHPKGFAYIEFADKDS++TA A+D+SLFR
Sbjct: 1 VDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFR 60
Query: 159 GRQIKVNPKRTNRPGISTTN 178
GRQIKV PKRTNRPG+STT+
Sbjct: 61 GRQIKVVPKRTNRPGVSTTD 80
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 118/188 (62%), Gaps = 17/188 (9%)
Query: 19 DHIENGDMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN 76
D + + + D+ D A EL MK R++EMEEEA L+ +Q++V+K+M P ++
Sbjct: 3 DEMLDSQLNKDEGASEDPAVKELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAAS 62
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
S K+EAD RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKG+A
Sbjct: 63 AA---SQATKEEADTRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGYA 118
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
Y+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+ + RGR R +A
Sbjct: 119 YVEFLEAEAVQNAILLNESELHGRQLKVTAKRTNVPGMK-------QFRGR----RFSAP 167
Query: 197 YGGYRPVR 204
Y GYRP R
Sbjct: 168 YMGYRPWR 175
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 27/200 (13%)
Query: 9 IHEEENFENGDHI-ENGDME---ADQSKCTDEA----ELAAMKARVREMEEEAEKLKQLQ 60
+ EEE+ G I E+GDM+ D + D+A EL MK R++EMEEEA L+ +Q
Sbjct: 1 MDEEEHEVYGQEIPEDGDMDGADVDMAASGDDAAKLQELDEMKRRLKEMEEEAAALRDMQ 60
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G P S + E K++ D RS+YVGNVDY T EE++ HF CG+VNR
Sbjct: 61 AKVAKEMQGGDPSAS------TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNR 114
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF +++ VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 115 VTILTDKF-GQPKGFAYVEFLEQEGVQEALNLNESELHGRQIKVAPKRTNVPGM------ 167
Query: 181 GPRGRGRGRVSRGAAMYGGY 200
+ R RG Y GY
Sbjct: 168 ------KQRPPRGYNPYHGY 181
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 107/153 (69%), Gaps = 12/153 (7%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
EN D + ++ DE E+AAMK RV EME EA KL+++Q+ +D Q S+NL
Sbjct: 33 ENLDRQPEEDDVGDEEEIAAMKKRVEEMEAEAAKLREMQASIDSQ--------SDNLR-- 82
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
E K++ D RSI+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG+AY+EF+
Sbjct: 83 --ESKEDIDARSIFVGNVDYGASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFS 140
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+ V A+ ++ES+FR R IKV PKRTN PG+
Sbjct: 141 EPQLVTQALVLNESVFRSRNIKVVPKRTNLPGM 173
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 118/188 (62%), Gaps = 17/188 (9%)
Query: 19 DHIENGDMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN 76
D + + + D+ D A EL MK R++EMEEEA L+ +Q++V+K+M P ++
Sbjct: 17 DEMLDSQLNKDEGASEDPAVKELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAAS 76
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
S K+EAD RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKG+A
Sbjct: 77 AA---SQATKEEADTRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGYA 132
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
Y+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+ + RGR R +A
Sbjct: 133 YVEFLEAEAVQNAILLNESELHGRQLKVTAKRTNVPGMK-------QFRGR----RFSAP 181
Query: 197 YGGYRPVR 204
Y GYRP R
Sbjct: 182 YMGYRPWR 189
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 103/140 (73%), Gaps = 12/140 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D+Q S +L E+K++ D RSI
Sbjct: 21 DEEEISAMKRRVAEMEEEAAKLREMQATLDQQ--------STDLR----EDKEDIDSRSI 68
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ E++++HF CGS+NRVTIL +KF GHPKG+AY+EF + V A+ ++E
Sbjct: 69 FVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNE 128
Query: 155 SLFRGRQIKVNPKRTNRPGI 174
S+F+GR +KV PKRTN PG+
Sbjct: 129 SVFKGRNLKVVPKRTNVPGM 148
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 98/138 (71%), Gaps = 7/138 (5%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ AMK RVREME+EA KL+++Q+E + S E+K D RS+YVG
Sbjct: 2 EIEAMKQRVREMEQEALKLREMQAEAEAGAEGASGVEGE-------EDKDAVDARSVYVG 54
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA+ VQ AM ++ESLF
Sbjct: 55 NVDYSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPAFVQHAMVLNESLF 114
Query: 158 RGRQIKVNPKRTNRPGIS 175
RGR IKV PKRTN PG +
Sbjct: 115 RGRLIKVVPKRTNVPGFN 132
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 117/201 (58%), Gaps = 13/201 (6%)
Query: 3 DQENSFIH---EEENFENGDHIENGDMEADQSKCTD-EAELAAMKARVREMEEEAEKLKQ 58
++++SF+ E EN ++A S + EL A++ ++ ME AE L +
Sbjct: 54 NEDSSFLLSLLEPENLAKSPVYNQRGLQATSSLLWGGQQELEAIRLKLWTMEH-AEVLPE 112
Query: 59 LQSEVDKQMSMG--------SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELES 110
S K SP + +E EAD RS+YVGNVDYG +A ELE+
Sbjct: 113 PPSVQRKATEEERAEARELLSPETIGCFFPGAPKENVEADHRSVYVGNVDYGGSAAELEA 172
Query: 111 HFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
+F CG ++RVTILC+KF GHPKG+AYIEFA K SVQ A+ +DES FRGR IKV PKRTN
Sbjct: 173 YFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQAAVRLDESTFRGRVIKVLPKRTN 232
Query: 171 RPGISTTNRGGPRGRGRGRVS 191
PGIS+T+RGG R R +
Sbjct: 233 FPGISSTDRGGLRTHSSSRAA 253
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK R++E+EEEA L+++Q++V+K+M P +++ S EK+E D RSIYVG
Sbjct: 43 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSV---SQAEKEEVDARSIYVG 99
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 100 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEADAVQNALILNETEL 158
Query: 158 RGRQIKVNPKRTNRPGISTTNR--GGPRGR 185
GRQ+KV+ KRTN PG+ R G RGR
Sbjct: 159 HGRQLKVSAKRTNVPGLKQYGRRPAGFRGR 188
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 105/155 (67%), Gaps = 11/155 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMS---------MGSPPNSNNLLNLSIEEKKE 88
EL A+K ++ ME AE L + Q V ++ + + SP + +EK E
Sbjct: 83 ELEAIKLKLWAMEH-AETLPE-QPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKEKVE 140
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD RS+YVGNVDYG +A EL ++F CG ++RVTILC+KF GHPKG+AYIEFA ++SVQ
Sbjct: 141 ADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQA 200
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
A+ +DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 201 AVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 235
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 102/162 (62%), Gaps = 9/162 (5%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG--------SPPNSNNLLNLSIEEKKEA 89
EL A++ ++ ME AE L + S K SP + +E EA
Sbjct: 78 ELEAIRLKLWTMEH-AEVLPEPPSVQRKATEEERAEARELLSPETIGCFFPGAPKENVEA 136
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS+YVGNVDYG +A ELE++F CG ++RVTILC+KF GHPKG+AYIEFA K SVQ A
Sbjct: 137 DHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQAA 196
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
+ +DES FRGR IKV PKRTN PGIS+T+RGG R R +
Sbjct: 197 VRLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSSSRAA 238
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 6/158 (3%)
Query: 25 DMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
D + D S D+A ELA MK R++EMEEEA L+++Q++V+K+M P + + +
Sbjct: 23 DPDIDMSAGDDDAVTELAEMKKRLKEMEEEAAALREMQAKVEKEMGATQDPAT---MAAN 79
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
E K+E D RS+YVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF +
Sbjct: 80 QEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKF-GQPKGFAYVEFVE 138
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
++VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 139 VEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 100/141 (70%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D+Q + E K++ D RSI
Sbjct: 41 DEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELT------------ENKEDIDSRSI 88
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 89 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNE 148
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 149 SVFKGRNIKVVPKRTNIPGMS 169
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 100/141 (70%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D+Q + E K++ D RSI
Sbjct: 41 DEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELT------------ENKEDIDSRSI 88
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 89 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNE 148
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 149 SVFKGRNIKVVPKRTNIPGMS 169
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 11/177 (6%)
Query: 11 EEENFENGDHIENGDMEA-----DQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEV 63
EE G+ E GD + D S ++A ELA MK R++EMEEEA L+++Q++V
Sbjct: 4 EEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKV 63
Query: 64 DKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
+K+M P S + + E K+E D RS+YVGNVDY T EE++ HF CG+VNRVTI
Sbjct: 64 EKEMGATQDPAS---MAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
L +KF G PKGFAY+EF + ++VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 121 LMDKF-GQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 6/158 (3%)
Query: 25 DMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
D + D S ++A ELA MK R++EMEEEA L+++Q++V+K+M P S + +
Sbjct: 23 DPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPAS---MAAN 79
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
E K+E D RS+YVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF +
Sbjct: 80 QEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKF-GQPKGFAYVEFVE 138
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
++VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 139 VEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 98/141 (69%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D Q S E + + D RSI
Sbjct: 30 DEEEISAMKKRVAEMEEEAAKLREMQANLDHQTQELS------------ESRDDVDSRSI 77
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 78 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNE 137
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 138 SVFKGRNIKVVPKRTNYPGMS 158
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 121/195 (62%), Gaps = 14/195 (7%)
Query: 21 IENGDMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
+E GD+ D S D+A EL MK R++EMEEEA L+++Q++V+K+M P + +
Sbjct: 15 VEEGDI--DMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAV 72
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
S E K+EAD RS++VGNVDY T EE++ HF CG+VNRVTIL +KF GHPKGFAY+
Sbjct: 73 ---SQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYV 128
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST--TNRGGP----RGRGRGRVSR 192
EF + +++Q A+ ++E+ GRQ+KV KRTN PG+ R P R R
Sbjct: 129 EFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPY 188
Query: 193 GAAMYGGYRPVRRAR 207
+ YGGY R R
Sbjct: 189 FYSPYGGYGKTPRFR 203
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 107/153 (69%), Gaps = 17/153 (11%)
Query: 18 GDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNN 77
G+HI+N + D DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + N
Sbjct: 10 GEHIDNQEKGGD-----DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TEN 56
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
L E+K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKG+AY
Sbjct: 57 LR----EDKEDIDARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAY 112
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
+EF++ V A+ ++ESLFRGR +KV PKRTN
Sbjct: 113 VEFSEPSLVAQALVLNESLFRGRNLKVVPKRTN 145
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 99/135 (73%), Gaps = 12/135 (8%)
Query: 41 AMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVD 100
AMK RV EME EA KL+++Q+ +D+Q S +L E+K+E D RSI+VGNVD
Sbjct: 28 AMKKRVAEMESEAAKLREMQATLDQQ--------SESLR----EDKEEIDARSIFVGNVD 75
Query: 101 YGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGR 160
YGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++ES+FRGR
Sbjct: 76 YGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 135
Query: 161 QIKVNPKRTNRPGIS 175
+KV PKRTN PG++
Sbjct: 136 NLKVVPKRTNLPGMT 150
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 114/177 (64%), Gaps = 12/177 (6%)
Query: 38 ELAAMKARVREMEE-EAE------KLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
EL A+K ++ ME EA+ + K + E + + SP + + + +E EAD
Sbjct: 97 ELEAIKLKLWAMEHAEAQPEPPCVQRKATEEERAEVRQLLSPETVDCFFSRTSKENVEAD 156
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS++VGNVDYG +A ELE++F CG ++RVTILC+KF GHPKG+AYIEFA SV+ A+
Sbjct: 157 HRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAV 216
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVRRAR 207
+DES FRGR IKV PKRTN PGIS+T+RGG R SR A ++G R+AR
Sbjct: 217 GLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSG---SRAAFLHGSLH--RKAR 268
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI
Sbjct: 28 EEEEITAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESVDARSI 75
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 76 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNE 135
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 136 SVFKGRNIKVTPKRTNVPGMS 156
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 100/136 (73%), Gaps = 12/136 (8%)
Query: 41 AMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVD 100
AMK RV EME EA KL+++Q+ +D+Q S +L E+K++ D RSI+VGNVD
Sbjct: 29 AMKRRVAEMESEAAKLREMQATLDQQ--------SESLK----EDKEDIDARSIFVGNVD 76
Query: 101 YGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGR 160
YGA+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EFA+ V A+ ++ES+FRGR
Sbjct: 77 YGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 136
Query: 161 QIKVNPKRTNRPGIST 176
+KV PKRTN PG+S+
Sbjct: 137 NLKVVPKRTNLPGMSS 152
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 100/144 (69%), Gaps = 5/144 (3%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE-----EKKEAD 90
+AE+ MK RV+EMEEEA KL ++QSEV+ QM + N + + + + D
Sbjct: 43 DAEIEDMKRRVKEMEEEAAKLSEMQSEVESQMGKNTASTLNEMNGGAAGAAANAQPAQMD 102
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
SIY+G VDYG+T EEL++ F CG++NRVTILC+KF G PKG+AYIEFA D+V++A+
Sbjct: 103 DTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESAL 162
Query: 151 AMDESLFRGRQIKVNPKRTNRPGI 174
+++++FRGRQ+KV PKR N G
Sbjct: 163 LLNDTMFRGRQLKVTPKRQNVRGF 186
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI
Sbjct: 28 EEEEITAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESVDARSI 75
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 76 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNE 135
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 136 SVFKGRNIKVTPKRTNVPGMS 156
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 118/177 (66%), Gaps = 17/177 (9%)
Query: 9 IHEEENFENGDHIEN--GDME-----ADQSKCTDEA--ELAAMKARVREMEEEAEKLKQL 59
+ EEE+ G I + GDM+ D S D+A EL MK R++EMEEEA L+++
Sbjct: 1 MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREM 60
Query: 60 QSEVDKQMSMGSPPNSN--NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGS 117
Q++V+K+M P S N N K+EAD RS++VGNVDY T EE++ HF CG+
Sbjct: 61 QAKVEKEMGAVPDPASAAANQAN-----KEEADSRSVFVGNVDYACTPEEVQQHFQSCGT 115
Query: 118 VNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
VNRVTIL +KF G PKGFAY+EF + ++VQ A+A++ES GRQ+KV+PKRTN PG+
Sbjct: 116 VNRVTILTDKF-GQPKGFAYVEFVEVEAVQEALALNESELHGRQLKVSPKRTNVPGM 171
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 100/140 (71%), Gaps = 12/140 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D+Q + E K++ D RSI
Sbjct: 37 DEEEISAMKRRVAEMEEEAAKLREMQATLDQQHHELT------------ENKEDIDSRSI 84
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + + V A+ ++E
Sbjct: 85 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLVAQALVLNE 144
Query: 155 SLFRGRQIKVNPKRTNRPGI 174
S+F+GR IKV PKRTN PG+
Sbjct: 145 SVFKGRNIKVVPKRTNIPGM 164
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 6/149 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK R++E+EEEA L+++Q++V+K+M P +++ S EK+E D RSIYVG
Sbjct: 43 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSV---SQAEKEEVDARSIYVG 99
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 100 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEADAVQNALILNETEL 158
Query: 158 RGRQIKVNPKRTNRPGISTTNR--GGPRG 184
GRQ+KV+ KRTN PG+ R G RG
Sbjct: 159 HGRQLKVSAKRTNVPGLKQYGRRPAGFRG 187
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 22/204 (10%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQ 60
M D+E+ ++ +E +G+ ++ G D +K EL MK R++EMEEEA L+++Q
Sbjct: 1 MEDEEHE-VYGQEIPVDGEDVDMGAAGDDAAKLH---ELDEMKRRLKEMEEEAAALREMQ 56
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G P + + E K+E D RS++VGNVDY T EE++ HF+ CG+VNR
Sbjct: 57 AKVAKEMQGGDPNATTS------EAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNR 110
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF + +++Q A+ + ES GRQIKV PKRTN PG+
Sbjct: 111 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQ---- 165
Query: 181 GPRGRGRGRVSRGAAMYGGYRPVR 204
PRG RG YGG+ +R
Sbjct: 166 -PRG------GRGYNPYGGHPYMR 182
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK R++E+EEEA L+++Q++V+K+M P +++ S EK+E D RSIYVG
Sbjct: 19 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSV---SQAEKEEVDARSIYVG 75
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 76 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEADAVQNALILNETEL 134
Query: 158 RGRQIKVNPKRTNRPGISTTNR--GGPRGR 185
GRQ+KV+ KRTN PG+ R G RGR
Sbjct: 135 HGRQLKVSAKRTNVPGLKQYGRRPAGFRGR 164
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 106/163 (65%), Gaps = 23/163 (14%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQM---------------------SMGSPPN 74
+AE+ MK RV+EMEEEA KL ++QS+V+ QM ++GS N
Sbjct: 36 DAEIEDMKRRVKEMEEEAAKLSEMQSQVESQMGKNTASSLNELNASASGSSGHAIGS--N 93
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
SN N + D S+YVG VDYG+T EEL++ F CG++NRVTILC+KF G PKG
Sbjct: 94 SNTSTNPNGGSSTALDDSSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKG 153
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 177
+AYIEFA KD+V++A+ +++++FRGRQ+KV PKR N G + T
Sbjct: 154 YAYIEFASKDAVESALLLNDTMFRGRQLKVTPKRQNVRGFNYT 196
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 13 ENFENGDHIENGDMEADQS---KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM 69
EN DH D E +Q T+E E+ AMK RV EMEEEA+KL+++Q+ +++Q
Sbjct: 14 ENQHEIDHDREHDEEQEQGTEMSATEEEEITAMKRRVAEMEEEAKKLREMQATLEQQ--- 70
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
S L + +K+ D RSI+VGNVDY A+ E+++ HF CGS+NRVTIL +KF
Sbjct: 71 -----SAELAD----DKESIDARSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFT 121
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
G PKG+AY+EF + V A+ ++ES+F+GR IKV PKRTN PG+
Sbjct: 122 GQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKVTPKRTNVPGM 166
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 127/204 (62%), Gaps = 25/204 (12%)
Query: 3 DQENSFIHEEENFENGDHIENGDMEADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQ 60
D+E ++ +E +GD +E GD+ D + D+A EL MK R++EMEEEA L+ +Q
Sbjct: 2 DEEEHEVYGQEIPVDGD-MEGGDV--DMTTGGDDAAKELDEMKRRLKEMEEEAAALRDMQ 58
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
++V K+M G S + E K++ D RS+YVGNVDY T EE++ HF CG+VNR
Sbjct: 59 AKVAKEMQGGDANAS------TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNR 112
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
VTIL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 113 VTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPKRTNVPGM------ 165
Query: 181 GPRGRGRGRVSRGAAMYGGYRPVR 204
+ R RG Y GY P R
Sbjct: 166 ------KQRPPRGFNPYHGY-PYR 182
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 101/144 (70%), Gaps = 14/144 (9%)
Query: 31 SKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
S + +AE+ M+ +V+EMEEEAEKLKQL V++Q + +++E D
Sbjct: 14 SLMSADAEIEEMQKKVQEMEEEAEKLKQLTDSVEEQ--------GEGI------DREEVD 59
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+Y+G+VDYG+T EEL+ HF CG +NR+TIL +K+ GHPKGFAY+EFAD+ SVQ ++
Sbjct: 60 KRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSL 119
Query: 151 AMDESLFRGRQIKVNPKRTNRPGI 174
++ SLFRGRQ+KV KRTN PG
Sbjct: 120 LLNGSLFRGRQLKVMQKRTNVPGF 143
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E++AMK RV EME EA KL+++Q+ +D+ +LS E+K++ D RSI
Sbjct: 23 EEEEISAMKRRVAEMEAEAAKLREMQASLDQSRQ-----------DLS-EDKEDVDNRSI 70
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY + EEL++HF CGS+NRVTIL +KF GHPKG+AY+EF++ + V A+ +++
Sbjct: 71 FVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVAQALVLND 130
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 131 SVFKGRNIKVEPKRTNIPGMS 151
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 108/161 (67%), Gaps = 15/161 (9%)
Query: 18 GDHIENGDMEADQSKCTDEA---ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
GD + + ++ + K +D E++AMK RV EMEEEA KL+++Q+ +D+Q +
Sbjct: 35 GDDVNDDEVRQLRPKPSDTIHREEISAMKRRVAEMEEEAAKLREMQASLDQQHHELT--- 91
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
E K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG
Sbjct: 92 ---------ENKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKG 142
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+AY+EF + V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 143 YAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIPGMS 183
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 108/161 (67%), Gaps = 15/161 (9%)
Query: 18 GDHIENGDMEADQSKCTDEA---ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
GD + + ++ + K +D E++AMK RV EMEEEA KL+++Q+ +D+Q +
Sbjct: 35 GDDVNDDEVRQLRPKPSDTIHREEISAMKRRVAEMEEEAAKLREMQASLDQQHHELT--- 91
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
E K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG
Sbjct: 92 ---------ENKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKG 142
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+AY+EF + V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 143 YAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIPGMS 183
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 104/153 (67%), Gaps = 7/153 (4%)
Query: 38 ELAAMKARVREMEE-EAE------KLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
EL A+K ++ ME EA+ + K + E + + SP + + + +E EAD
Sbjct: 97 ELEAIKLKLWAMEHAEAQPEPPCVQRKATEEERAEVRQLLSPETVDCFFSRTSKENVEAD 156
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS++VGNVDYG +A ELE++F CG ++RVTILC+KF GHPKG+AYIEFA SV+ A+
Sbjct: 157 HRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAV 216
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 217 GLDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 249
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 122/200 (61%), Gaps = 21/200 (10%)
Query: 10 HEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM 69
HE E+ ++ +H + D E ++ + +L MK R++E+EEEA L+++Q++V+K+M
Sbjct: 29 HEHEHDQDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGA 88
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
+S + EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF
Sbjct: 89 VQDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF- 144
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST-----TNRGGPRG 184
G PKGFAY+EF + D+VQ A+ ++E+ GRQ+KV+ KRTN PG+ N G RG
Sbjct: 145 GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG 204
Query: 185 R------------GRGRVSR 192
R G GR+ R
Sbjct: 205 RRPFIPGVPFVPYGYGRIPR 224
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI
Sbjct: 37 EEEEITAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESIDARSI 84
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ E+++SHF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++E
Sbjct: 85 FVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNE 144
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 145 SVFKGRNIKVTPKRTNVPGMS 165
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++ MK RV EMEEEA KL+++Q+ +D Q S++L + +K++ D RSI
Sbjct: 20 DEEEISQMKKRVAEMEEEAAKLREMQASLDVQ--------SHDLSD----DKEDIDSRSI 67
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY AT E++++HF CGS+NRVTIL +KF GHPKG+AY+EF + V A+ +++
Sbjct: 68 FVGNVDYSATPEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVEFTEPTLVAQALVLND 127
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F GR +KV PKRTN PG++
Sbjct: 128 SMFHGRNLKVVPKRTNLPGMT 148
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 104/153 (67%), Gaps = 7/153 (4%)
Query: 38 ELAAMKARVREMEE-EAE------KLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
EL A+K ++ ME EA+ + K + E + + SP + + + +E EAD
Sbjct: 82 ELEAIKLKLWAMEHAEAQPEPPCVQRKATEEERAEVRQLLSPETVDCFFSRTSKENVEAD 141
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS++VGNVDYG +A ELE++F CG ++RVTILC+KF GHPKG+AYIEFA SV+ A+
Sbjct: 142 HRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAV 201
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 202 GLDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 234
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 99/136 (72%), Gaps = 12/136 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTN 170
SLFRGR IKV PKRTN
Sbjct: 130 SLFRGRNIKVVPKRTN 145
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 99/136 (72%), Gaps = 12/136 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ V A+ ++E
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNE 129
Query: 155 SLFRGRQIKVNPKRTN 170
SLFRGR IKV PKRTN
Sbjct: 130 SLFRGRNIKVVPKRTN 145
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+ DM A T EL MK R++EMEEEA L+++Q++V K+M G PN+
Sbjct: 18 EDVDMAAGDD-ATKLQELDEMKRRLKEMEEEAAALREMQAKVAKEMQ-GVDPNAT----- 70
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K+E D RS++VGNVDY T EE++ HF+ CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 71 TSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFV 129
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+ ++VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 130 EVEAVQEAVKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 100/138 (72%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI+VG
Sbjct: 1 EITAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESIDARSIFVG 48
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++ES+F
Sbjct: 49 NVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVF 108
Query: 158 RGRQIKVNPKRTNRPGIS 175
+GR IKV PKRTN PG+S
Sbjct: 109 KGRNIKVTPKRTNIPGMS 126
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 15/171 (8%)
Query: 5 ENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVD 64
EN+ + E+ N E D EN + + E++AMK RV EMEEEA KL+++Q+ +D
Sbjct: 7 ENTTV-EDHNPEQNDSNENNSVGEEDGHDE--EEISAMKRRVAEMEEEAAKLREMQASLD 63
Query: 65 KQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
+Q S E K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL
Sbjct: 64 QQSRELS------------ENKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTIL 111
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
+KF G PKG+AY+EF + V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 112 LDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNVPGMS 162
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 17/157 (10%)
Query: 21 IENGDMEADQSKCT-----DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
+E D AD + DE E++AMK RV EMEEEA KL+++Q+ +D Q S
Sbjct: 17 VEQQDTPADNQQAAEDDGHDEEEISAMKRRVAEMEEEAAKLREMQATLDTQTQDVS---- 72
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
+ K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+
Sbjct: 73 --------DNKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGY 124
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
AY+EF + V A+ ++ES+F+GR IKV PKRTN P
Sbjct: 125 AYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 17/157 (10%)
Query: 21 IENGDMEADQSKCT-----DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
+E D AD + DE E++AMK RV EMEEEA KL+++Q+ +D Q S
Sbjct: 17 VEQQDTPADNQQAAEDDGHDEEEISAMKRRVAEMEEEAAKLREMQATLDTQTQDIS---- 72
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
+ K++ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+
Sbjct: 73 --------DNKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGY 124
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
AY+EF + V A+ ++ES+F+GR IKV PKRTN P
Sbjct: 125 AYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 100/138 (72%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI+VG
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESVDARSIFVG 49
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++ES+F
Sbjct: 50 NVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVF 109
Query: 158 RGRQIKVNPKRTNRPGIS 175
+GR IKV PKRTN PG+S
Sbjct: 110 KGRNIKVTPKRTNIPGMS 127
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 100/138 (72%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI+VG
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESVDARSIFVG 49
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++ES+F
Sbjct: 50 NVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVF 109
Query: 158 RGRQIKVNPKRTNRPGIS 175
+GR IKV PKRTN PG+S
Sbjct: 110 KGRNIKVTPKRTNIPGMS 127
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 100/138 (72%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
E+ AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RSI+VG
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQ--------SADLAD----DKESVDARSIFVG 49
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++ES+F
Sbjct: 50 NVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVF 109
Query: 158 RGRQIKVNPKRTNRPGIS 175
+GR IKV PKRTN PG+S
Sbjct: 110 KGRNIKVTPKRTNIPGMS 127
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 12/137 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV+EME EA KL+++Q+ +D Q + L E K++ D RS++VGN
Sbjct: 32 IAAMKKRVQEMEAEAAKLREMQASIDAQ--------TEGLR----ESKEDIDGRSVFVGN 79
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF++ + V A+ +++S FR
Sbjct: 80 VDYGASPEEIQAHFQTCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNDSQFR 139
Query: 159 GRQIKVNPKRTNRPGIS 175
GR IKV PKRTN PG++
Sbjct: 140 GRAIKVVPKRTNLPGMT 156
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+ DM A T EL MK R++EMEEEA L+++Q++V K+M G PN+
Sbjct: 18 EDVDMAAGDD-ATKLQELDDMKRRLKEMEEEAAALREMQAKVAKEMQ-GVDPNAT----- 70
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K+E D RS+++GNVDY T EE++ HF+ CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 71 TSENKEEMDSRSVFIGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFV 129
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+ ++VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 130 EVEAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 100/141 (70%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA +L+++Q + + Q S L + K++ D RSI
Sbjct: 23 DEEEISAMKRRVAEMEEEAARLREMQKDTEHQ--------SQELAD----NKEDVDSRSI 70
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF++ V A+ ++E
Sbjct: 71 FVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSLVAQALVLNE 130
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+F+GR IKV PKRTN PG+S
Sbjct: 131 SVFKGRNIKVVPKRTNIPGMS 151
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 100/142 (70%), Gaps = 12/142 (8%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
T+E E+ AMK RV EMEEEA+KL+++Q+ +++Q S L + +K+ D R
Sbjct: 36 ATEEEEITAMKRRVAEMEEEAKKLREMQATLEQQ--------SAELAD----DKESIDAR 83
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SI+VGNVDY A+ E+++ HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ +
Sbjct: 84 SIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVL 143
Query: 153 DESLFRGRQIKVNPKRTNRPGI 174
+ES+F+GR IKV PKRTN PG+
Sbjct: 144 NESMFKGRSIKVTPKRTNVPGM 165
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 97/137 (70%), Gaps = 12/137 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
++AMK RV EMEEEA KL+++Q+ +D+Q S E K++ D RSI+VGN
Sbjct: 38 ISAMKRRVAEMEEEAAKLREMQASLDQQSRELS------------ENKEDIDSRSIFVGN 85
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++ES+F+
Sbjct: 86 VDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFK 145
Query: 159 GRQIKVNPKRTNRPGIS 175
GR IKV PKRTN PG+S
Sbjct: 146 GRNIKVVPKRTNVPGMS 162
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 98/143 (68%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E D D + + E+ MK RV EME EA+KL++LQ+ + S + + +
Sbjct: 13 EGADPMLDDGEEAESKEIQLMKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPME 72
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ EEK +D RS++VGNVDYGAT EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA
Sbjct: 73 TEEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFA 132
Query: 142 DKDSVQTAMAMDESLFRGRQIKV 164
+ D + A+AMD SLFRGR IKV
Sbjct: 133 EPDFIDAALAMDNSLFRGRLIKV 155
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 118/177 (66%), Gaps = 17/177 (9%)
Query: 9 IHEEENFENGDHIEN--GDME-----ADQSKCTDEA--ELAAMKARVREMEEEAEKLKQL 59
+ EEE+ G I + GDM+ D S D+A EL MK R++EMEEEA L+++
Sbjct: 1 MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREM 60
Query: 60 QSEVDKQMSMGSPPNSN--NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGS 117
Q++V+K+M P + N N ++EAD RS++VGNVDY T EE++ HF CG+
Sbjct: 61 QAKVEKEMGAVQDPATAAANQAN-----REEADSRSVFVGNVDYACTPEEVQQHFQSCGT 115
Query: 118 VNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
VNRVTIL +KF G PKGFAY+EF + ++VQ A+A++ES GRQ+KV+PKRTN PG+
Sbjct: 116 VNRVTILTDKF-GQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGM 171
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 86/108 (79%), Gaps = 2/108 (1%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
++K EAD RS+YVGNVDY TA ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA +
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATE 203
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGR 189
S Q A+ +D S+FRGR IKV PKRTN PGIS+T+RGG RG RGR
Sbjct: 204 SSAQAAVELDNSVFRGRVIKVLPKRTNFPGISSTDRGGLRGHPSARGR 251
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 124/208 (59%), Gaps = 32/208 (15%)
Query: 9 IHEEENFENGDHIE-NGDME---ADQSKCTDEA--------ELAAMKARVREMEEEAEKL 56
+ EEE+ G I +GDME D + D+A EL MK R++EMEEEA L
Sbjct: 1 MDEEEHEVYGQEIPVDGDMEGGDVDMTTGGDDAAKSFSLMQELDEMKRRLKEMEEEAAAL 60
Query: 57 KQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCG 116
+ +Q++V K+M G S + E K++ D RS+YVGNVDY T EE++ HF CG
Sbjct: 61 RDMQAKVAKEMQGGDANAS------TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACG 114
Query: 117 SVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST 176
+VNRVTIL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 115 TVNRVTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPKRTNVPGM-- 171
Query: 177 TNRGGPRGRGRGRVSRGAAMYGGYRPVR 204
+ R RG Y GY P R
Sbjct: 172 ----------KQRPPRGFNPYHGY-PYR 188
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 112/170 (65%), Gaps = 11/170 (6%)
Query: 11 EEENFENGDHIENGDMEADQSKCTDEA-----ELAAMKARVREMEEEAEKLKQLQSEVDK 65
EE G+ + G+ME D + EL MK R++EMEEEA L+++Q++VDK
Sbjct: 4 EEHEVYGGEIPDEGEMEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDK 63
Query: 66 QM-SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
++ S+ P NS S K+EAD RS++VGNVDY T EE++ HF CG+VNRVTIL
Sbjct: 64 EIGSVQDPANSA----ASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTIL 119
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+KF G PKGFAY+EF + ++VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 120 TDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGM 168
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 112/170 (65%), Gaps = 11/170 (6%)
Query: 11 EEENFENGDHIENGDMEADQSKCTDEA-----ELAAMKARVREMEEEAEKLKQLQSEVDK 65
EE G+ + G+ME D + EL MK R++EMEEEA L+++Q++VDK
Sbjct: 4 EEHEVYGGEIPDEGEMEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDK 63
Query: 66 QM-SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
++ S+ P NS S K+EAD RS++VGNVDY T EE++ HF CG+VNRVTIL
Sbjct: 64 EIGSVQDPANSA----ASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTIL 119
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+KF G PKGFAY+EF + ++VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 120 TDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGM 168
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 105/163 (64%), Gaps = 19/163 (11%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK +++EMEEEA L+ +Q++V K+M G P S + E K++ D RS+YVG
Sbjct: 38 ELDEMKRKLKEMEEEAAALRDMQAKVAKEMQGGDPSIS------TAEAKEQVDARSVYVG 91
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF ++++VQ A+ ++ES
Sbjct: 92 NVDYACTPEEVQQHFQACGTVNRVTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESEL 150
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 151 HGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 181
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 23/163 (14%)
Query: 24 GDMEADQSKCTDE-----------AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSP 72
D+EA+Q + DE E++AM+ RV+EMEEEA+KL+Q+Q +D
Sbjct: 2 SDVEAEQKREEDERLDTAEDPNEEEEISAMRRRVQEMEEEAQKLRQMQQAID-------- 53
Query: 73 PNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHP 132
N + E K++ D RS++VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHP
Sbjct: 54 ----NERHEMRESKEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHP 109
Query: 133 KGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
KG+AY+EF + V A+ +D S FR R +KV PKRTN PG++
Sbjct: 110 KGYAYVEFTEPHLVNEALVLDNSQFRNRNLKVVPKRTNLPGMT 152
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSP---PNSNNLLNLSIEEKKEADLRSIY 95
+ AMK+R+ E+E+EAE L+Q++ +K+ + P+ + + E+ AD RS+Y
Sbjct: 28 ILAMKSRLEEIEKEAEALRQMREAQEKEAKAIAAVAAPSEGDEMETD-EDPHAADERSVY 86
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDYGA+ EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA+ V+TA ++ES
Sbjct: 87 VGNVDYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETAQTLNES 146
Query: 156 LFRGRQIKVNPKRTNRP 172
LF+GR IKV PKRTN P
Sbjct: 147 LFKGRLIKVVPKRTNIP 163
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E D D + + E+ MK RV EME EA+KL++LQ+ + S + + +
Sbjct: 13 EGADPMLDDGEEAESKEIQLMKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPME 72
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ EEK +D RS++VGNVDYGAT EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA
Sbjct: 73 TEEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFA 132
Query: 142 DKDSVQTAMAMDESLFRGRQIKVN--PKRTN 170
+ D + A+AMD SLFRGR IK + P+R +
Sbjct: 133 EPDFIDAALAMDNSLFRGRLIKTSSTPRRMS 163
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 21/164 (12%)
Query: 11 EEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
E+ + E DH NGD DE E++AMK RV EME EA KL+++Q+ +D+
Sbjct: 67 EKPHDETRDHA-NGD--------NDEEEISAMKLRVAEMEAEAAKLREMQASLDQARQ-- 115
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
+LS E+K++ D RSI+VGNVDY + EEL++HF CGS+NRVTIL +KF G
Sbjct: 116 ---------DLS-EDKEDIDNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTG 165
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
PKG+AY+EF++ + V A+ +++S+F+GR IKV PKRTN PG+
Sbjct: 166 QPKGYAYVEFSEPNLVAQALVLNDSVFKGRNIKVEPKRTNIPGM 209
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 15/165 (9%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+ DM A T EL MK R++EMEEEA L+++Q++V K M PN+
Sbjct: 18 EDVDMSAGDD-ATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDMQ---DPNAT----- 68
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K+E D RS++VGNVDY T EE++ HF+ CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 69 TSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFV 127
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+ ++VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 128 EVEAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 167
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 111/170 (65%), Gaps = 10/170 (5%)
Query: 11 EEENFENGDHIENGDME--ADQSKCTDEA----ELAAMKARVREMEEEAEKLKQLQSEVD 64
EE G+ + +ME D S DEA EL M+ R++EMEEEA L+++ ++V+
Sbjct: 4 EEHEVYGGEIPDVAEMEGDVDMSAADDEAGGMKELDEMRRRLKEMEEEAAALREMHAKVE 63
Query: 65 KQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
K++ P S + S E K+EAD RS++VGNVDY T EE++ HF CG+VNRVTIL
Sbjct: 64 KEIGSVQDPAS---VAASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTIL 120
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+KF G PKGFAY+EF + ++VQ A+ + ES GRQ+KV PKRTN PG+
Sbjct: 121 TDKF-GQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGM 169
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 100/137 (72%), Gaps = 12/137 (8%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
T+E E++AMK RV EMEEEA+KL+++Q+ +++Q S +L + +K+ D RS
Sbjct: 25 TEEEEISAMKRRVAEMEEEAKKLREMQASLEQQ--------SASLAD----DKESVDARS 72
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGNVDY A+ EE+++HF CGS+NRVTIL +KF G PKG+AY+EF + V A+ ++
Sbjct: 73 IFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLN 132
Query: 154 ESLFRGRQIKVNPKRTN 170
ES+F+GR IKV PKRTN
Sbjct: 133 ESVFKGRNIKVTPKRTN 149
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 110/168 (65%), Gaps = 8/168 (4%)
Query: 11 EEENFENGDHIENGDME--ADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EE G+ G+ME D S D+A EL MK R++EMEEEA L+++Q++V+K+
Sbjct: 4 EEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 63
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M P + S K+E D RS++VGNVDY T EE++ HF CG+VNRVTIL +
Sbjct: 64 MGAVQDPAGTSA---SQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
KF G PKGFAY+EF + ++VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 121 KF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGM 167
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 113/182 (62%), Gaps = 16/182 (8%)
Query: 9 IHEEENFENGDHIE-NGDMEADQSKCTDEA-----ELAAMKARVREMEEEAEKLKQLQSE 62
+ EEE+ G I +GDME EL MK R++EMEEEA L+ +Q++
Sbjct: 1 MDEEEHEVYGQEIPVDGDMEGTDVDMAAAGDDAAKELDEMKRRLKEMEEEAAALRDMQAK 60
Query: 63 VDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVT 122
V K+M G S + E K++ D RS+YVGNVDY T EE++ HF CG+VNRVT
Sbjct: 61 VAKEMQGGDANAS------TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVT 114
Query: 123 ILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
IL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQIKV+PKRTN PG+ P
Sbjct: 115 ILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRP---P 170
Query: 183 RG 184
RG
Sbjct: 171 RG 172
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 92/133 (69%), Gaps = 9/133 (6%)
Query: 29 DQSKCTDE-AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK 87
+ + TDE AE+ AMK RV EME EA KL++LQ + G P S EE++
Sbjct: 36 ETTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP--------SEEERE 87
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
E D RSIYVGNVDYGAT EEL+ HF CG++NRVTILC+KF GHPKG+AY+EFAD V
Sbjct: 88 EVDSRSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVA 147
Query: 148 TAMAMDESLFRGR 160
AM ++ESLFRGR
Sbjct: 148 NAMVLNESLFRGR 160
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 111/160 (69%), Gaps = 11/160 (6%)
Query: 22 ENGDMEADQSKCTDEA-------ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
E DM+AD + ++ EL MK R++E+EEEA L+++Q++V+K+M G+ +
Sbjct: 16 EEIDMDADAEQQDEQLAPNHTNKELEDMKKRLKEIEEEASALREMQAKVEKEM--GAVQD 73
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
S+ + + EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKG
Sbjct: 74 SSGT-SATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 131
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
FAY+EF + D+VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 132 FAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGM 171
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 94/138 (68%), Gaps = 12/138 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL AMKARV EME EAEKL+++Q ++DK+ S L N +K+ D +S+YVG
Sbjct: 16 ELQAMKARVAEMEAEAEKLREMQEQLDKE--------SEALRN----DKEALDAQSVYVG 63
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EEL++HF CG +NRVTILC+KF GHPKGFAYIEFA+ V A+ + S+
Sbjct: 64 NVDYSVTPEELQAHFAECGPINRVTILCDKFTGHPKGFAYIEFAEPSVVPNALLRNGSML 123
Query: 158 RGRQIKVNPKRTNRPGIS 175
R +KV PKR N PG+S
Sbjct: 124 HDRPLKVTPKRMNIPGMS 141
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 100/148 (67%), Gaps = 13/148 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E++AM+ RV+EMEEEA+KL+Q+Q+ +D N + E K++ D RS+
Sbjct: 24 EEEEISAMRRRVQEMEEEAQKLRQMQAAID------------NERHEMRESKEDVDARSV 71
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG+AY+EF + V A+ +D
Sbjct: 72 FVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDN 131
Query: 155 SLFRGRQIKVNPKRTNRPGISTTNRGGP 182
S FR R +KV PKRTN PG RG P
Sbjct: 132 SEFRSRNLKVVPKRTNLPG-GYGGRGSP 158
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 105/157 (66%), Gaps = 16/157 (10%)
Query: 16 ENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
E DH + D + +E E++AMK RV EME EA KL+++Q+ +D+ +
Sbjct: 14 ETRDHADGTDAD----DANEEEEISAMKRRVAEMEAEAAKLREMQASLDQARA------- 62
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
+L+ E+K+E D RSI+VGNVDY + EEL++HF CGS+NRVTIL +KF G PKG+
Sbjct: 63 ----DLT-EDKEEVDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGY 117
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
AY+EFA+ V A+ +++S+F+GR IKV PKRTN P
Sbjct: 118 AYVEFAEPSLVAQALVLNDSVFKGRNIKVAPKRTNIP 154
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 98/138 (71%), Gaps = 12/138 (8%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
++ R+ EME+EA KL++L S+++ ++ N + EEKK+ D RSIY+GNVDY
Sbjct: 50 VQMRMEEMEKEAAKLRELNSKLNTEVD-----------NATSEEKKDIDSRSIYIGNVDY 98
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGR 160
GAT EL+ HF GCG VNRVTI NKF G PKG+AY+EF D D+V A+A +D S FR R
Sbjct: 99 GATPLELQQHFSGCGVVNRVTIPLNKFSGSPKGYAYLEFGDIDAVNKAIATLDGSTFRDR 158
Query: 161 QIKVNPKRTNRPGISTTN 178
+IKV+ KRTN PG+S+TN
Sbjct: 159 EIKVSSKRTNVPGLSSTN 176
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 100/141 (70%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E++AM+ RV+EMEEEA+KL+Q+Q+ +D N + + E K++ D RS+
Sbjct: 24 EEEEISAMRRRVQEMEEEAQKLRQMQAAID---------NERHEMR---ESKEDVDARSV 71
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG+AY+EF + V A+ +D
Sbjct: 72 FVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDG 131
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S FR R +KV PKRTN PG++
Sbjct: 132 SEFRNRNLKVVPKRTNLPGMT 152
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 110/160 (68%), Gaps = 11/160 (6%)
Query: 22 ENGDMEADQSKCTDEA-------ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
E DM+AD + ++ EL MK R++E+EEEA L+++Q++V+K+M G+ +
Sbjct: 16 EEIDMDADAEQQDEQLAPNHTNKELEDMKKRLKEIEEEASALREMQAKVEKEM--GAVRD 73
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
S+ +E ++E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKG
Sbjct: 74 SSGTSATQVE-REEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 131
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
FAY+EF + D+VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 132 FAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGM 171
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 103/159 (64%), Gaps = 19/159 (11%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK +++EMEEEA L+ +Q++V K+M G P S + E K++ D RS+YVGNVDY
Sbjct: 1 MKRKLKEMEEEAAALRDMQAKVAKEMQGGDPSIS------TAEAKEQVDARSVYVGNVDY 54
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF ++++VQ A+ ++ES GRQ
Sbjct: 55 ACTPEEVQQHFQACGTVNRVTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNESELHGRQ 113
Query: 162 IKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
IKV PKRTN PG+ + R RG Y GY
Sbjct: 114 IKVAPKRTNVPGM------------KQRPPRGYNPYHGY 140
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 12/142 (8%)
Query: 34 TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRS 93
T E EL MK RV EME EA KL+ +Q ++D + + L N +K+ D +S
Sbjct: 9 TQEKELLEMKERVAEMEAEAAKLRAMQEQLDNE--------TEALRN----DKESIDAQS 56
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDY T EEL+SHF CGSVNRVTILC+KF GHPKGFAYIEF++ V A+ ++
Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLN 116
Query: 154 ESLFRGRQIKVNPKRTNRPGIS 175
S+ R +KV PKRTN PG+S
Sbjct: 117 GSMLHERPLKVTPKRTNVPGMS 138
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 22 ENGDMEADQSKCTDEA-------ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN 74
E DM+AD + ++ EL MK R++E+EEEA L+++Q++V+K+M G+ +
Sbjct: 16 EEIDMDADAEQQDEQLAPNHTNKELEDMKKRLKEIEEEASALREMQAKVEKEM--GAVQD 73
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
S+ + + EK+E D R IYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKG
Sbjct: 74 SSGT-SATQAEKEEVDARPIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 131
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA 194
FAY+EFA+ D+VQ A+ ++ES GRQ+KV+ KRTN PG+ P G R A
Sbjct: 132 FAYVEFAEIDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYFGRRPAGFRSRRPFMSA 191
Query: 195 AMYGGY 200
+ Y
Sbjct: 192 PFFPPY 197
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 109/168 (64%), Gaps = 8/168 (4%)
Query: 11 EEENFENGDHIENGDME--ADQSKCTDEA--ELAAMKARVREMEEEAEKLKQLQSEVDKQ 66
EE G+ G+ME D S D+A EL MK R++EMEEEA L+++Q++V K+
Sbjct: 4 EEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVGKE 63
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M P + S K+E D RS++VGNVDY T EE++ HF CG+VNRVTIL +
Sbjct: 64 MGAVQDPAGTSA---SQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
KF G PKGFAY+EF + ++VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 121 KF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGM 167
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 97/138 (70%), Gaps = 12/138 (8%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
++ R+ EME+EA KL++L S+++ ++ N + EEKK+ D RSIYVGNVDY
Sbjct: 50 VQMRMEEMEKEAAKLRELNSKLNTEVD-----------NATSEEKKDIDSRSIYVGNVDY 98
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGR 160
GAT EL+ HF GCG VNRVTI NKF G PKGFAY+EF D D+V A+A +D S FR R
Sbjct: 99 GATPLELQQHFSGCGVVNRVTIPLNKFSGSPKGFAYLEFGDIDAVNKAIATLDGSTFRDR 158
Query: 161 QIKVNPKRTNRPGISTTN 178
+IKV KRTN PG+S++N
Sbjct: 159 EIKVLSKRTNVPGLSSSN 176
>gi|351712927|gb|EHB15846.1| Embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 308
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 105/178 (58%), Gaps = 32/178 (17%)
Query: 39 LAAMKARVREMEE-----EAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADL 91
L A+K ++ ME+ E ++L +E + + + SP ++ E EAD
Sbjct: 95 LEAIKLKLWTMEQAQGAPEPPSKQELATEEEGARARQLLSPETVGGPFPVAPRETVEADH 154
Query: 92 RSIYVGN-------------------------VDYGATAEELESHFHGCGSVNRVTILCN 126
RSIYVGN VDYG TAEEL++HFH CG V+RVTILC+
Sbjct: 155 RSIYVGNSECYCTGSWAPSPLCAENTGAVPGQVDYGGTAEELQAHFHPCGEVHRVTILCD 214
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
KF GHPKG+AY+EF + S Q A+ +DES+FRGR IKV PKRTN PGIS+T+RGG +G
Sbjct: 215 KFSGHPKGYAYVEFTTQLSAQAAVELDESIFRGRVIKVLPKRTNFPGISSTDRGGLQG 272
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 17/162 (10%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
I E++ ++ H ++G+M T+E E++AMK RV EME+EAEKL+++Q+ +++Q
Sbjct: 11 IPAEQHEQHEQHDQDGEMAG-----TEEEEISAMKRRVAEMEQEAEKLREMQASLEQQ-- 63
Query: 69 MGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKF 128
S +L + +K+ D RSI+VGNVDY A+ EE+++HF CGS+NRVTIL +KF
Sbjct: 64 ------SASLAD----DKESVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKF 113
Query: 129 DGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
G PKG+AY+EF + V A+ ++ES+F+GR IKV KRTN
Sbjct: 114 SGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVTSKRTN 155
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 97/141 (68%), Gaps = 12/141 (8%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E++AM+ RV+EMEEEA KL+++Q +D + E K++ D RS+
Sbjct: 24 EEEEISAMRRRVQEMEEEAAKLREMQQSLDTERHEMR------------ESKEDVDARSV 71
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG+AY+EF + V A+ +D
Sbjct: 72 FVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPSLVNEALVLDN 131
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
S+FR R +KV PKRTN PG++
Sbjct: 132 SVFRSRNLKVVPKRTNLPGMT 152
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 21/172 (12%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++V+K+M +S + EK+E D RS+YVG
Sbjct: 60 DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSVYVG 116
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF GHPKGFAY+EF + D+VQ A+ ++ES
Sbjct: 117 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNALLLNESEL 175
Query: 158 RGRQIKVNPKRTNRPGIST-----TNRGGPRGR------------GRGRVSR 192
GRQ+KV+ KRTN PG+ N G RGR G GRV R
Sbjct: 176 HGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPR 227
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++ +K M P+ +S EK+E D RSIYVG
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSGG----VSAAEKEEVDSRSIYVG 108
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ ++ ++ES
Sbjct: 109 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQNSLILNESEL 167
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
GRQIKV+ KRTN PG+ RGRGR
Sbjct: 168 HGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 114/172 (66%), Gaps = 21/172 (12%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++V+K+M G+ +S++ + + EK+E D RS+YVG
Sbjct: 52 DLEDMKRRLKEIEEEAGALREMQAKVEKEM--GAVQDSSST-SATQAEKEEVDSRSVYVG 108
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF GHPKGFAY+EF + D+VQ A+ ++ES
Sbjct: 109 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNALLLNESEL 167
Query: 158 RGRQIKVNPKRTNRPGIST-----TNRGGPRGR------------GRGRVSR 192
GRQ+KV+ KRTN PG+ N G RGR G GRV R
Sbjct: 168 HGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPR 219
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 20/182 (10%)
Query: 1 MSDQENSF----IHEEENFENGDHIENGDMEADQSKCTDEA----ELAAMKARVREMEEE 52
M D+E+ I +E+ + N D D + D+A EL MK R++EMEEE
Sbjct: 1 MEDEEHEVYGGEIPDEDAYMNTD--------VDMIRTDDDAVKLQELDEMKKRLKEMEEE 52
Query: 53 AEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHF 112
A L+++Q++V+K+M G P S + E K+E D RS++VGNVDY T EE++ HF
Sbjct: 53 AAALREMQAKVEKEMGAGQDPAS---AAANQESKQEVDSRSVFVGNVDYSCTPEEVQQHF 109
Query: 113 HGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
CG+VNRVTIL +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ+KV+ KRTN P
Sbjct: 110 QSCGTVNRVTILTDKF-GQPKGYAYVEFLEVEAVQEALQLNESELHGRQLKVSAKRTNVP 168
Query: 173 GI 174
G+
Sbjct: 169 GM 170
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 18/197 (9%)
Query: 18 GDHIENGDMEADQ------SKCTDEAE-----LAAMKARVREMEEEAEKLKQLQSEVDKQ 66
G+ + G+M+AD S+ D+++ + M+ R++E+EEEA L+++Q++V+K+
Sbjct: 17 GEIPDEGEMDADAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGALREMQAKVEKE 76
Query: 67 MSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
M G+ +S++ + + EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +
Sbjct: 77 M--GAVQDSSSA-SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 133
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRG 184
KF G PKGFAY+EF + D+VQ A+ ++ES GRQ+KV+ KRTN PG+ R P G
Sbjct: 134 KF-GQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPFG 192
Query: 185 -RGRGRVSRGAAMYGGY 200
RGR G + Y Y
Sbjct: 193 FRGRRPFMPGPSFYPPY 209
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 101/138 (73%), Gaps = 6/138 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
EL MK R++EMEEEA L+++Q++V+K++ S+ P N+ S K+EAD RS++V
Sbjct: 42 ELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAA----SQANKEEADARSVFV 97
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 98 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESE 156
Query: 157 FRGRQIKVNPKRTNRPGI 174
GRQ+KV PKRTN PG+
Sbjct: 157 LHGRQLKVLPKRTNVPGM 174
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 10/156 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++ +K M G P+ +S EK+E D RSIYVG
Sbjct: 55 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPSGG----VSAAEKEEVDSRSIYVG 110
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ ++ ++ES
Sbjct: 111 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQNSLILNESEL 169
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG 193
GRQIKV+ KRTN PG+ RGR R RG
Sbjct: 170 HGRQIKVSAKRTNVPGMRQF-----RGRRPFRPMRG 200
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 10/156 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++ +K M G P+ +S EK+E D RSIYVG
Sbjct: 55 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPSGG----VSAAEKEEVDSRSIYVG 110
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ ++ ++ES
Sbjct: 111 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQNSLILNESEL 169
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG 193
GRQIKV+ KRTN PG+ RGR R RG
Sbjct: 170 HGRQIKVSAKRTNVPGMRQF-----RGRRPFRPMRG 200
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 103/146 (70%), Gaps = 12/146 (8%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE 84
D +A+ DE E+AAMK RV EME EA KL+++Q+ +D Q S++L E
Sbjct: 14 DRQAEDEDLGDEEEIAAMKKRVEEMEAEAAKLREMQASIDNQ--------SDSLR----E 61
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
K++ D RSI+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG+AY+EF++
Sbjct: 62 SKEDIDNRSIFVGNVDYGASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQ 121
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTN 170
V +A+ ++ES+FR R IKV PKRTN
Sbjct: 122 FVTSALVLNESVFRNRNIKVVPKRTN 147
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
++K EAD RS+YVGNVDY TA ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA +
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATE 203
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGR 189
S Q + +D S+FRG IKV PKRTN PGIS+T+RGG RG RGR
Sbjct: 204 SSAQAPVELDNSVFRGPVIKVLPKRTNFPGISSTDRGGLRGHPSARGR 251
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++ +K M P+ +S EK+E D RSIYVG
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSGG----VSAAEKEEVDSRSIYVG 108
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ ++ ++ES
Sbjct: 109 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQNSLILNESEL 167
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
GRQIKV+ KRTN PG+ RGRGR
Sbjct: 168 HGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++ +K M P+ +S EK+E D RSIYVG
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSGG----VSAAEKEEVDSRSIYVG 108
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ ++ ++ES
Sbjct: 109 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQNSLILNESEL 167
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
GRQIKV+ KRTN PG+ RGRGR
Sbjct: 168 HGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 101/138 (73%), Gaps = 6/138 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
EL MK R++EMEEEA L+++Q++V+K++ S+ P N+ S K+EAD RS++V
Sbjct: 42 ELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANA----AASQANKEEADARSVFV 97
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 98 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESE 156
Query: 157 FRGRQIKVNPKRTNRPGI 174
GRQ+KV PKRTN PG+
Sbjct: 157 LHGRQLKVLPKRTNVPGM 174
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+ DM A T EL MK R++EMEEEA L+++Q++V K M PN+
Sbjct: 18 EDVDMSAGDD-ATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDMQ---DPNAT----- 68
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K+E D RS++VGNVDY T EE++ HF+ CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 69 TSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFV 127
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+ ++VQ A+ ++ES GRQ+KV PKRTN PG+ RGRG
Sbjct: 128 EVEAVQEAIKLNESELHGRQLKVAPKRTNIPGMKQL-----RGRG 167
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 108/165 (65%), Gaps = 13/165 (7%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+ DM A T EL MK R++EMEEEA L+++Q++V K+M G PN+
Sbjct: 18 EDVDMAAGDD-ATKLQELDDMKRRLKEMEEEAAALREMQAKVAKEMQ-GVDPNAT----- 70
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K+E D RS+++GNVDY T + HF+ CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 71 TSENKEEMDSRSVFIGNVDYACTPXXVXQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFV 129
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+ ++VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 130 EVEAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 113/177 (63%), Gaps = 8/177 (4%)
Query: 27 EADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEE 85
E D+ + + +L MK R++E+EEEA L+++Q++V+K+M ++ P ++ + E
Sbjct: 38 EEDEYQDPNSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSPGAS----ATQAE 93
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
K+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+
Sbjct: 94 KEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVDA 152
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRGRGRGRVSRGAAMYGGY 200
+Q A+ ++ES GRQ+KV+ KRTN PG+ R P G R A Y Y
Sbjct: 153 IQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGLRSRRPFMPAPFYPAY 209
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNN--LLN 80
+G M AD + AELAAMKARV EME EA KL++L + + GS ++ + +N
Sbjct: 46 DGTMAADDDP--EAAELAAMKARVAEMEAEAAKLRELTAASEAAAGGGSAASNGDGSDVN 103
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+S E+++ D RSIYVGNVDY AT EE++ HF CG++NRVTIL +K+ G PKG+AY+EF
Sbjct: 104 MSDEDRQAVDARSIYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTG-PKGYAYVEF 162
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
A+ VQ A+ ++ES+ RGRQIKV+ KRTN P
Sbjct: 163 AEPSLVQNALHLNESVLRGRQIKVSEKRTNLP 194
>gi|168065663|ref|XP_001784768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663676|gb|EDQ50428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 111/183 (60%), Gaps = 35/183 (19%)
Query: 33 CTDEA---ELAAMKARVREMEEEAEKLKQLQSEVDKQMSM--------GSPPNSNNLLNL 81
TDEA EL MK R++EMEEEA L+ +Q++V+K+MS GSP N
Sbjct: 39 ATDEAASKELEEMKKRLKEMEEEAAALRDMQAKVEKEMSAVQDSVGKDGSPAN------- 91
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
++EAD RS++VGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 92 ----REEADARSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFL 146
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYR 201
+ ++VQ A+ ++ES RQ+KV KRTN PG+ RG P A + GYR
Sbjct: 147 EVEAVQNAILLNESELHNRQLKVTAKRTNVPGMKAY-RGRP-----------YAPFYGYR 194
Query: 202 PVR 204
P R
Sbjct: 195 PRR 197
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 9/142 (6%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
+K ++ EME+E KL++L S++ + ++N + + + EEK++ D RSIY+GNVDY
Sbjct: 20 VKNKLEEMEQETAKLRELHSQLSSE-------STNGVTHPTDEEKRDTDARSIYIGNVDY 72
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGR 160
G+T EL+ HF G VNRVTIL NKF G PKGFAY+EFAD D+V A+A +D S FR R
Sbjct: 73 GSTPLELQQHFSSAGVVNRVTILTNKFTGQPKGFAYLEFADTDAVNKAVATLDGSTFRER 132
Query: 161 QIKVNPKRTNRPGISTTNRGGP 182
Q+KV+ KRTN PGIS RG P
Sbjct: 133 QLKVSAKRTNIPGIS-VKRGFP 153
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 11/151 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSE------VDKQMSMGSPPNSNNLLNLSIEEKKEA-- 89
ELA M+AR+ EME E L S V +S G N + + ++EE E+
Sbjct: 30 ELALMQARLAEMEAEKNALAASTSASGNGTPVSHNVS-GGETNETHEGDGNMEEDGESSE 88
Query: 90 --DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
D+RS+++GNVDYGAT EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA+ VQ
Sbjct: 89 AVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQ 148
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
A+ ++ES+FRGR ++V KRTN PG++ TN
Sbjct: 149 NALVLNESMFRGRMLQVKEKRTNVPGMNMTN 179
>gi|324537487|gb|ADY49506.1| Polyadenylate-binding protein 2, partial [Ascaris suum]
Length = 127
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 97/124 (78%), Gaps = 5/124 (4%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGS--PPNSNNLLNLSIEEKKEADLRS 93
E E+ + +R++E+EEEA L++LQ EV+KQ++M S PP + S+E+K EAD RS
Sbjct: 6 EKEIDLLTSRMKEIEEEAAMLRRLQVEVEKQLNMNSSRPPAR---IYASLEDKVEADNRS 62
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IY+GNV ATA+EL +HF+GCGSVNRVTI +KF GHPKGFAY+EF +K+SVQTAMA++
Sbjct: 63 IYIGNVGCFATADELRAHFYGCGSVNRVTIPTDKFTGHPKGFAYMEFTEKESVQTAMALN 122
Query: 154 ESLF 157
E+LF
Sbjct: 123 ETLF 126
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 109/176 (61%), Gaps = 9/176 (5%)
Query: 27 EADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEK 86
E D+ + + +L MK R++E+EEEA L+++Q++V+K+M ++ EK
Sbjct: 38 EEDEYQDPNSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQGASATQA------EK 91
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+V
Sbjct: 92 EEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFIEVDAV 150
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRGRGRGRVSRGAAMYGGY 200
Q A+ ++ES GRQ+KV+ KRTN PG+ R P G R A Y Y
Sbjct: 151 QNAVLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSPYGFRSQRAFMPAPFYPAY 206
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 111/162 (68%), Gaps = 7/162 (4%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
M+ R++E+EEEA L+++Q++V+K+M G+ +S++ + + EK+E D RSIYVGNVDY
Sbjct: 1 MRKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSA-SATQAEKEEVDSRSIYVGNVDY 57
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+VQ A+ ++ES GRQ
Sbjct: 58 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNESELHGRQ 116
Query: 162 IKVNPKRTNRPGISTT--NRGGPRG-RGRGRVSRGAAMYGGY 200
+KV+ KRTN PG+ R P G RGR G + Y Y
Sbjct: 117 LKVSAKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPY 158
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 10/134 (7%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG----SPPNSNNLLNLSIEEKKEAD 90
D E+ MK RV EME EA+KL+++Q+ +K S P E+K D
Sbjct: 26 DSKEIMLMKQRVEEMEREAKKLREMQAAAEKAADTSEGGESAPMDTE------EDKNLID 79
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS+YVGNVDYGAT EE++ HF CG++NRVTILC+KF GHPKG+AY+EFA+ + V A+
Sbjct: 80 SRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAAL 139
Query: 151 AMDESLFRGRQIKV 164
+MD SLFRGR IKV
Sbjct: 140 SMDNSLFRGRLIKV 153
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 97/133 (72%), Gaps = 12/133 (9%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV EME EA KL+++QS++++Q G E++++ D RSI+VGN
Sbjct: 25 IAAMKRRVAEMESEAAKLREMQSQLEQQSEGGRR-----------EDREDVDARSIFVGN 73
Query: 99 VDYGATAEELESHF-HGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
VDYGAT EE+++HF G GS+NRVTIL +KF GHPKG+AY+EF+D V A+ ++ES+F
Sbjct: 74 VDYGATPEEIQAHFASGPGSINRVTILLDKFTGHPKGYAYVEFSDPALVAQALVLNESVF 133
Query: 158 RGRQIKVNPKRTN 170
RGR +KV PKRTN
Sbjct: 134 RGRNLKVVPKRTN 146
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 98/137 (71%), Gaps = 12/137 (8%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
++AMK RV EME EA KL+++Q+ +D++ ++K++ D RS++VGN
Sbjct: 31 ISAMKRRVAEMEAEAAKLREMQASMDQERQGLQ------------DDKEDIDNRSVFVGN 78
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDY A+ EEL+SHF CGS+NRVTIL +KF G PKG+AY+EF++ + V A+ +++SLF+
Sbjct: 79 VDYSASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALVLNDSLFK 138
Query: 159 GRQIKVNPKRTNRPGIS 175
GR IKV PKRTN PG+S
Sbjct: 139 GRNIKVEPKRTNLPGMS 155
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 98/138 (71%), Gaps = 12/138 (8%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
AE+ AM+AR+++++EEA KL+ +Q + K +S +L E+++E D RSIYV
Sbjct: 25 AEMEAMQARLQQLQEEASKLESMQQDATK--------SSEDLK----EDQEEIDARSIYV 72
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDYGAT +ELE HF CGSV RVTIL +KF G+PKG+AYIEFA+ V A+ +++S
Sbjct: 73 GNVDYGATPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIEFAEPKDVAQAVTLNDSE 132
Query: 157 FRGRQIKVNPKRTNRPGI 174
FR RQ+KV+ KRTN PG
Sbjct: 133 FRQRQLKVSAKRTNIPGF 150
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 13/152 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN-SNNLLNLSIE---------EKK 87
ELA M+AR+ EME E L S + PPN S N + E E
Sbjct: 21 ELALMQARLAEMEAEKNALAASTSASGNGTPV--PPNVSGGETNETHEGDGNMEEDGESS 78
Query: 88 EA-DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
EA D+RS+++GNVDYGAT EE+++HF CG++NRVTILC+KF GHPKG+AY+EFA+ V
Sbjct: 79 EAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIV 138
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
Q A+ ++ES+F+GR ++V KRTN PG++ TN
Sbjct: 139 QNALVLNESMFKGRMLQVKEKRTNVPGMNMTN 170
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 12/136 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK RV+EME+EA KLK +Q E+ Q+ G+ N + D RSIYVG
Sbjct: 33 ELEEMKRRVQEMEDEAAKLKAMQQEL--QVETGAEAKKEN----------DTDERSIYVG 80
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
VDY AT EEL++HF CG++NRVTILC+KF G KG+AY+EF + SV TA+ +D S+F
Sbjct: 81 QVDYDATPEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPTAVLLDNSIF 140
Query: 158 RGRQIKVNPKRTNRPG 173
+GRQ+KV KRTN PG
Sbjct: 141 KGRQLKVVAKRTNVPG 156
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 10/131 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG----SPPNSNNLLNLSIEEKKEADLRS 93
E+ MK RV EME EA+KL+++Q+ +K S P E+K D RS
Sbjct: 1 EIMLMKQRVEEMEREAKKLREMQAAAEKAADTSEGGESAPMDTE------EDKNLIDSRS 54
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGNVDYGAT EE++ HF CG++NRVTILC+KF GHPKG+AY+EFA+ + V A++MD
Sbjct: 55 VYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALSMD 114
Query: 154 ESLFRGRQIKV 164
SLFRGR IKV
Sbjct: 115 NSLFRGRLIKV 125
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 18/152 (11%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSI-------------- 83
+L MK R++E+EEEA L+++Q++V+K+M G+ ++ L LSI
Sbjct: 54 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQGISHSLPLSIYIVLWSYSSSGSAT 111
Query: 84 -EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF +
Sbjct: 112 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 170
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
D+VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 171 VDAVQNALLLNESELHGRQLKVSAKRTNIPGM 202
>gi|168028169|ref|XP_001766601.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682246|gb|EDQ68666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 21/174 (12%)
Query: 34 TDEA---ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
TDE EL MK R++EMEEEA L+ +Q++V+K+M S L N ++EAD
Sbjct: 40 TDEVASKELEEMKKRLKEMEEEAAALRDMQAKVEKEMG-----GSQALTNGDQANREEAD 94
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
RS++VGNVDY T EE++ HF CG+VNRVTIL +KF G PKG+AY+EF + ++VQ A+
Sbjct: 95 ARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GSPKGYAYVEFLEVEAVQNAI 153
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVR 204
+ ES R IKV KRTN PG+ +G R A Y GYRP R
Sbjct: 154 LLSESELHNRPIKVTAKRTNVPGM------------KGYRGRPYAPYYGYRPRR 195
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 97/152 (63%), Gaps = 13/152 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPN-----------SNNLLNLSIEEK 86
ELA M+AR+ EME AEK S PPN ++ + E
Sbjct: 37 ELALMQARLAEME--AEKNALAASTSASANGTPVPPNVGGGETNETHEGDDNMEEDGESS 94
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
+ D+RS+++GNVDYGAT EE++ HF CG++NRVTILC+KF GHPKG+AY+EFA+ V
Sbjct: 95 EAVDMRSVFIGNVDYGATPEEIQGHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIV 154
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
Q A+ ++ES+FRGR ++V KRTN PG++ TN
Sbjct: 155 QNALVLNESMFRGRMLQVKEKRTNVPGMNMTN 186
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 100/141 (70%), Gaps = 9/141 (6%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
D+ ELA +KA++ EM++EA L+++Q + MG N+ +L + +++ D RS+
Sbjct: 76 DDQELAILKAKMEEMKQEANALREMQEQ------MG---NNGTHPHLDLAARQDIDNRSV 126
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
Y+GN+DY AT +EL+ HF CGS+NR+TI NKF G+PKGFAYIEF+D V A+++++
Sbjct: 127 YIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALSLND 186
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
SLF+GR +K++ KRTN PG S
Sbjct: 187 SLFKGRNLKISAKRTNVPGFS 207
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 98/160 (61%), Gaps = 23/160 (14%)
Query: 38 ELAAMKARVREME---------------EEAEKLKQLQS------EVDKQMS--MGSPPN 74
EL A+K +V ME EE E L Q Q E + M+ + SP
Sbjct: 83 ELEAIKMKVCAMEQAEGPPWSLGAQHQAEEEEGLPQPQGVQHQAEEEEGTMTGQLLSPEA 142
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
+ L + EEK EAD RS+YVGNVDYG +AEELE+HF GCG V+RVTILC+KF GHPKG
Sbjct: 143 TGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKG 202
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+AYIEFA K SVQ A+ +D+SLFRGR IKV PG+
Sbjct: 203 YAYIEFATKGSVQAAVELDQSLFRGRVIKVRQCSPGAPGV 242
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 98/137 (71%), Gaps = 4/137 (2%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++V+K+M +S + EK+E D RS+YVG
Sbjct: 54 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSGSATQA---EKEEVDSRSVYVG 110
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + D+VQ A+ ++ES
Sbjct: 111 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVDAVQNALLLNESEL 169
Query: 158 RGRQIKVNPKRTNRPGI 174
GRQ+KV+ KRTN PG+
Sbjct: 170 HGRQLKVSAKRTNIPGM 186
>gi|241957093|ref|XP_002421266.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644610|emb|CAX40598.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 187
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 9/142 (6%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
+K ++ +ME+EA KL++L S++ S ++N + + + EEK++AD RSIY+GNVDY
Sbjct: 20 VKNKMEQMEQEAAKLRELHSQL-------SAESTNGITHPTDEEKRDADARSIYIGNVDY 72
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGR 160
G+T EL+ HF G VNRVTIL NKF G KGFAY+EF D D+V A+A +D S FR R
Sbjct: 73 GSTPLELQQHFSSAGVVNRVTILTNKFTGQAKGFAYLEFVDTDAVDKAVATLDGSTFRER 132
Query: 161 QIKVNPKRTNRPGISTTNRGGP 182
Q+KV+ KRTN PGIS RG P
Sbjct: 133 QLKVSAKRTNIPGIS-VKRGFP 153
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 98/139 (70%), Gaps = 8/139 (5%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN--NLLNLSIEEKKEADLRSIY 95
EL MK R++EMEEEA L+++Q++V+K+M P S N N K+E D RS++
Sbjct: 39 ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAANQAN-----KEETDSRSVF 93
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + +++Q A+ ++ES
Sbjct: 94 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAIQEALLLNES 152
Query: 156 LFRGRQIKVNPKRTNRPGI 174
GRQ+KV PKRTN PG+
Sbjct: 153 ELHGRQLKVLPKRTNVPGM 171
>gi|440909353|gb|ELR59267.1| hypothetical protein M91_03724 [Bos grunniens mutus]
Length = 424
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 22 ENGDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
E+G +E D ++ EL A+KARVREMEEEAEKLK+LQ+EV+KQM+M PP + +
Sbjct: 254 ESGLVEGDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 313
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+SIEEK EAD RSIYVGNVDYGATAEELE+HFHGCGSVNRVTILC+KF GHPKGF +
Sbjct: 314 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGF----W 369
Query: 141 ADKDSV--QTAMAMDESLFRGRQIKVN 165
D + T ++++ F G Q + +
Sbjct: 370 PDIKGLIRVTFYILEKTWFMGCQFQTS 396
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 96/139 (69%), Gaps = 10/139 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQ--MSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
EL AMKAR+ +ME+EA KLK++Q + K+ ++ G P ++ K+EAD RS+Y
Sbjct: 1 ELEAMKARLADMEKEAAKLKEMQDKAQKEAGIAPGGP-------SVDAAAKEEADSRSVY 53
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGNVDY T EEL+ HF CG+VNRVTIL +K G+PKGFAYIEF + D+V A +D S
Sbjct: 54 VGNVDYSCTPEELQMHFQSCGTVNRVTILTDKM-GNPKGFAYIEFLEADAVTNACLLDGS 112
Query: 156 LFRGRQIKVNPKRTNRPGI 174
R R IKV+PKRTN PG+
Sbjct: 113 ELRNRAIKVSPKRTNVPGM 131
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 12/159 (7%)
Query: 23 NGDMEADQSKCTDEA-------ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
+GDMEA A EL MK R++EME+EA L+++Q++V+K+M P
Sbjct: 20 DGDMEAPNPDMEMAAADEDAAKELDEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPAT- 78
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
L + K+E D RS++VGNVDY T EE++ HF CG+V+RVTIL +KF G PKGF
Sbjct: 79 ---LAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKF-GQPKGF 134
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
AY+EF + +++Q A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 135 AYVEFVEVEAIQEALQLNESELHGRQLKVLPKRTNVPGL 173
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 99/162 (61%), Gaps = 26/162 (16%)
Query: 38 ELAAMKARVREME---------------EEAEKLKQLQS------EVDKQMS--MGSPPN 74
EL A+K +V ME EE E L Q Q E + M+ + SP
Sbjct: 83 ELEAIKMKVCAMEQAEGPPWSLGAQHQAEEEEGLPQPQGVQHQAEEEEGTMAGQLLSPEA 142
Query: 75 SNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
+ L + EEK EAD RS+YVGNVDYG +AEELE+HF GCG V+RVTILC+KF GHPKG
Sbjct: 143 TGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKG 202
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST 176
+AYIEFA K SVQ A+ +D+SLFRGR IKV R PG T
Sbjct: 203 YAYIEFATKGSVQAAVELDQSLFRGRVIKV---RQCSPGPGT 241
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 10/145 (6%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK R++EME+EA L+ +Q++V+K+M G P + K+EAD RS+YVGNVDY
Sbjct: 1 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAAA----QQASKEEADARSVYVGNVDY 56
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES GR
Sbjct: 57 SCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQNALILNESELHGRP 115
Query: 162 IKVNPKRTNRPGISTTNRGGPRGRG 186
IKV KRTN PG+ RGRG
Sbjct: 116 IKVAAKRTNVPGLKQH-----RGRG 135
>gi|302755738|ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 107/170 (62%), Gaps = 11/170 (6%)
Query: 10 HEEENFENGDHIENGDMEADQSKCTDEA-----ELAAMKARVREMEEEAEKLKQLQSEVD 64
HE E D +E E + D+ EL MK R++EME+EA L+ +Q++V+
Sbjct: 11 HEVYGAEIPDEVEEEAHEKAEGPARDDGSAKFKELEDMKKRLKEMEDEAAALRDMQAKVE 70
Query: 65 KQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
K+M G N+ + K+EAD RS+YVGNVDY T EE++ HF CG+VNRVTIL
Sbjct: 71 KEMGAGQDANAASQAG-----KEEADARSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTIL 125
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+KF G PKG+AY+EF + ++VQ A+ ++ES GR +KV+ KRTN PG+
Sbjct: 126 TDKF-GQPKGYAYVEFLEGEAVQNAILLNESELHGRPLKVSAKRTNVPGM 174
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 11/126 (8%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQ----MSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
MK RV EME+EA KL+++Q +K +S G+P ++ E+K AD RSIYVG
Sbjct: 3 MKQRVEEMEKEAAKLREMQEAAEKASESGVSGGAPMDTE-------EDKTAADNRSIYVG 55
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY AT E++++HF CG++NRVTILC+KF GHPKG+AY+EFA+ + V A+ MD SLF
Sbjct: 56 NVDYSATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVTMDNSLF 115
Query: 158 RGRQIK 163
+GR IK
Sbjct: 116 KGRLIK 121
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 100/153 (65%), Gaps = 12/153 (7%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN------------LS 82
++ E+AAMK RV++MEEEA +L+++Q V+++ L + +
Sbjct: 22 EDKEIAAMKERVKQMEEEAARLREVQENVEQKPEEDQQQQPQQLESQEQSTFEGQDAEMM 81
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
E ++ D RS+YVGNVDY AT E+L+ HF CG++NRVTILC+KF GHPKG+AYIEFA+
Sbjct: 82 QESSEDVDGRSVYVGNVDYSATPEDLQKHFAACGTINRVTILCDKFTGHPKGYAYIEFAE 141
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
V+ A A++ESLF+GR IKV KR N P +
Sbjct: 142 PSLVENASALNESLFKGRLIKVVAKRKNVPFFA 174
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++V+K M S+ + EK+E D RSIYVG
Sbjct: 43 DLEDMKKRLKEIEEEASALREMQAKVEKDMGAVQDAGSS----ATQAEKEEVDGRSIYVG 98
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 99 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQNAVMLNESEL 157
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRG-RGRGRVSRGAAMYGGY 200
GRQ+KV+ KRTN PG+ P G R R A Y Y
Sbjct: 158 HGRQLKVSAKRTNVPGMKQYFGRRPAGFRSRRPFMPYAPFYPPY 201
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
++ E+ MK RV EME EA+KL++LQ+ + + +EK AD RSI
Sbjct: 24 EDKEIMLMKQRVEEMEREAKKLRELQAAAEASAGS----EEPEGEAGAEDEKAAADARSI 79
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDY AT EE+++HF CG +NRVTILC+KF GHPKG+AY+EFA+ + V A+AMD
Sbjct: 80 YVGNVDYSATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVAMDN 139
Query: 155 SLFRGRQIKVNPKRTNRP 172
SLF+GR +KV KRTN P
Sbjct: 140 SLFKGRLLKVTAKRTNIP 157
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
gi|300157248|gb|EFJ23874.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
Length = 224
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 10/150 (6%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
EL MK R++EME+EA L+ +Q++V+K+M G P + K+EAD RS+YV
Sbjct: 42 TELEEMKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAAA----QQASKEEADARSVYV 97
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
GNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 98 GNVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQNALILNESE 156
Query: 157 FRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
GR IK RTN PG+ RGRG
Sbjct: 157 LHGRPIKARISRTNVPGLKQH-----RGRG 181
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 13/172 (7%)
Query: 12 EENFENGDHIENGDMEADQSKC-TDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMG 70
EE +N + + ++++Q++ + EL KA++ EME E KL++LQ Q +G
Sbjct: 3 EETQDNKEQPQQSQLDSNQTESQASQQELDQWKAKMAEMEAEVNKLRELQG----QQEVG 58
Query: 71 S-PPNSNNLLN-------LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVT 122
S P N N LSIEE++E D +SIYVGNVD+ AT EL HF CG+VNRVT
Sbjct: 59 SRPENGVGTANSDSDPKFLSIEERQEIDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVT 118
Query: 123 ILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
IL +K G PKGFAY+EF+D SV ++ +++S F GR +KV PKRTN P
Sbjct: 119 ILMDKVTGRPKGFAYVEFSDPSSVSESLVLNDSEFHGRNLKVVPKRTNMPSF 170
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 6/141 (4%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEADLRS 93
+EA+L MK R++EME+EA LK++Q++V+K+M S+ P N++ S ++E D RS
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANAS----ASQINREEVDARS 69
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGNVDY T E+++ HF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++
Sbjct: 70 IFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFVEVEAVQEALLLN 128
Query: 154 ESLFRGRQIKVNPKRTNRPGI 174
ES GRQ+KV KRTN PG+
Sbjct: 129 ESELHGRQLKVTAKRTNVPGM 149
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 16/174 (9%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLL 79
+EN D+ D EL MK R++EME+EA L+++Q++V+K+M S+ P N++
Sbjct: 1 MENDDV--DMHAADTNEELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANAS--- 55
Query: 80 NLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
S K+E D RS++VGNVDY T EE++ HF CG+VNR+TI +KF G PKG+AY+E
Sbjct: 56 -ASQANKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVE 113
Query: 140 FADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS------TTN--RGGPRGR 185
F + ++VQ A+ ++ES GRQ+KV KRTN PG+ +TN GG RGR
Sbjct: 114 FLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSTNPYMGGLRGR 167
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 99/133 (74%), Gaps = 5/133 (3%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK R++E+EEEA L+++Q++V+K MG+ ++ + + + EK+E D RSIYVGNVDY
Sbjct: 1 MKKRLKEIEEEASALREMQAKVEK--DMGAVQDAGS--SATQAEKEEVDGRSIYVGNVDY 56
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES GRQ
Sbjct: 57 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQNAVMLNESELHGRQ 115
Query: 162 IKVNPKRTNRPGI 174
+KV+ KRTN PG+
Sbjct: 116 LKVSAKRTNVPGM 128
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 97/138 (70%), Gaps = 12/138 (8%)
Query: 26 MEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEE 85
+E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L E+
Sbjct: 12 LETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQ--------SESLR----ED 59
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF +
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSL 119
Query: 146 VQTAMAMDESLFRGRQIK 163
V A+ ++ES+FRGR +K
Sbjct: 120 VAQALVLNESVFRGRNLK 137
>gi|359075107|ref|XP_002694906.2| PREDICTED: embryonic polyadenylate-binding protein 2 [Bos taurus]
Length = 319
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 49/164 (29%)
Query: 85 EKKEADLRSIYVGN---------------------------------------------- 98
EK EAD RSIYVGN
Sbjct: 134 EKAEADHRSIYVGNGWRTEAQATTPHPGARSTPLYQENVLQEPLGGGGQCTRPPTMAHAW 193
Query: 99 -VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
VDYG TA+ELE++F+ CG ++RVTILC+KF GHPKG+AYIEFA + S Q A+ +D+S+F
Sbjct: 194 QVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIF 253
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYR 201
RGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG +
Sbjct: 254 RGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGGLQ 295
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 116/192 (60%), Gaps = 10/192 (5%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
+E+ D++ S D AEL MK R+++ME+EA L+++Q++V+K+MS P S
Sbjct: 1 MEHDDVDMIGSDAND-AELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPAS---AA 56
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
S ++E D RS++VGNVDY T EE++ HF CG+VNR+TI +KF G PKG+AY+EF
Sbjct: 57 ASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF 115
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST--TNRGGPRGRGRGRVSRGAAMY- 197
+ ++VQ A+ ++ES GRQ+KV KRTN PG+ R P R R A +
Sbjct: 116 VEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFF 175
Query: 198 --GGYRPVRRAR 207
GY V R R
Sbjct: 176 SPYGYGKVPRFR 187
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 118/189 (62%), Gaps = 10/189 (5%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE 84
DM ++ +EAEL MK R++EME+EA L+++Q++V+K+M GS P+ N + S
Sbjct: 7 DMVGAENNNNNEAELDDMKKRLKEMEDEAAALREMQAKVEKEM--GSVPDPANA-SASQT 63
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
++E D RS++VGNVDY T EE++ HF CG+VNRVTI +KF G PKG+AY+EF + +
Sbjct: 64 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLEVE 122
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP------RGRGRGRVSRGAAMYG 198
+VQ A+A++ES GRQ+KV+ KRTN PG+ P RGR A
Sbjct: 123 AVQEALALNESELHGRQLKVSGKRTNVPGMKQFRPRAPNPYMGFRGRALFAPPPFAFAPY 182
Query: 199 GYRPVRRAR 207
GY V R R
Sbjct: 183 GYGKVPRFR 191
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 12/171 (7%)
Query: 9 IHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMS 68
+ E E E G+ DQ +++ E A+ +R+ EME+EA KL++L S++
Sbjct: 17 VEEPNEMETTSQQEIGEPTNDQGAPSND-ESNAVNSRMEEMEKEAAKLRELHSQLSN--- 72
Query: 69 MGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKF 128
+SNN + S EE+++ D RS+Y+GNVDYG+T EL+ HF G VNRVTI NKF
Sbjct: 73 -----DSNN--DPSEEERRDIDSRSVYIGNVDYGSTPLELQQHFSSGGVVNRVTIPLNKF 125
Query: 129 DGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTN 178
G PKGFAY+EFAD D V A+A +D S FR R++KV KRTN PG+S+TN
Sbjct: 126 TGQPKGFAYLEFADIDGVNKAVATLDGSTFRDRELKVCAKRTNVPGMSSTN 176
>gi|302803015|ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
EL MK R++EME+EA L+ +Q++V+K+M N+ + K+EAD RS+YVG
Sbjct: 42 ELEDMKKRLKEMEDEAAALRDMQAKVEKEMGASQDANAASQAG-----KEEADARSVYVG 96
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 97 NVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGYAYVEFLEGEAVQNAILLNESEL 155
Query: 158 RGRQIKVNPKRTNRPGI 174
GR +KV+ KRTN PG+
Sbjct: 156 HGRPLKVSAKRTNVPGM 172
>gi|389747069|gb|EIM88248.1| hypothetical protein STEHIDRAFT_155598 [Stereum hirsutum FP-91666
SS1]
Length = 457
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 14/146 (9%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVD-------KQMSMGSPPNSNN 77
D D S+ + E+ MK RV EME EA KL++LQ+ + ++ S G+P ++
Sbjct: 16 DPSIDDSEEAESKEIMLMKQRVEEMEREAMKLRELQAAAESADGSSGREGSAGAPMEGDD 75
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
+K +AD RSIYVGNVDY AT E++++HF G++NRVTILC+KF GHPKG+AY
Sbjct: 76 -------DKAQADSRSIYVGNVDYAATPEDIQAHFQAAGTINRVTILCDKFTGHPKGYAY 128
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIK 163
+EFA+ + V A+A+D SLF GR IK
Sbjct: 129 VEFAEPEHVDAALALDNSLFHGRLIK 154
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 114/174 (65%), Gaps = 16/174 (9%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLL 79
+EN D++ + ++E L MK R++EME+EA L+++Q++V+K+M S P N++
Sbjct: 1 MENDDVDMHAADTSEE--LDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANAS--- 55
Query: 80 NLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
S K+E D RS++VGNVDY T EE++ HF CG+VNRVTI +KF G PKG+AY+E
Sbjct: 56 -ASQANKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 113
Query: 140 FADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS------TTN--RGGPRGR 185
F + ++VQ A+ ++ES GRQ+KV KRTN PG+ T N GG RGR
Sbjct: 114 FLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRTINPYMGGFRGR 167
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVG 97
+L MK R++E+EEEA L+++Q++V+K MG+ ++ + + + EK+E D RSIYVG
Sbjct: 43 DLEDMKKRLKEIEEEASALREMQAKVEK--DMGAVQDAGS--SATQAEKEEVDGRSIYVG 98
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++E
Sbjct: 99 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQNAVMLNELEL 157
Query: 158 RGRQIKVNPKRTNRPGISTTNRGGPRG-RGRGRVSRGAAMYGGY 200
GRQ+KV+ KRTN PG+ P G R R A Y Y
Sbjct: 158 HGRQLKVSAKRTNVPGMKQYFGRRPAGFRSRRPFMPYAPFYPPY 201
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 101/141 (71%), Gaps = 6/141 (4%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEADLRS 93
+EA+L MK R++EME+EA LK++Q++V+K+M S+ P N++ S ++E D RS
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSIQDPANAS----ASQINREEVDARS 69
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGNVDY T E+++ HF CG+VNRVTI +KF G PKG+AY+EF + ++ Q A+ ++
Sbjct: 70 IFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFVEVEAAQEALLLN 128
Query: 154 ESLFRGRQIKVNPKRTNRPGI 174
ES GRQ+KV KRTN PG+
Sbjct: 129 ESELHGRQLKVTAKRTNVPGM 149
>gi|345800807|ref|XP_851081.2| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Canis lupus familiaris]
Length = 310
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 93/128 (72%), Gaps = 12/128 (9%)
Query: 86 KKEADLRSIYVGN-VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK--------GFA 136
K E+D RSIYVGN VDYG+TAEELE++F+ CG V+RVTILC+KF GHP+ G+A
Sbjct: 163 KVESDHRSIYVGNXVDYGSTAEELEAYFNPCGEVHRVTILCDKFSGHPQGVSASQAAGYA 222
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKV-NPKRTNRPGISTTNRGGPRGR--GRGRVSRG 193
YIEFA K S Q A+ +D+S+FRGR IKV +RTN PGIS+T RGG RG+ RG+
Sbjct: 223 YIEFAAKSSAQAAVELDQSIFRGRVIKVCAAQRTNLPGISSTYRGGLRGQPHARGQPLPL 282
Query: 194 AAMYGGYR 201
+++ GG R
Sbjct: 283 SSLQGGAR 290
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 17 NGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN 76
+GD ++ +E ++ EL MK R++EME+EA L+++Q++V+K+M GS + +
Sbjct: 2 DGDDVDMAAVETAEAV----PELDDMKKRLKEMEDEAAALREMQAKVEKEM--GSVQDPS 55
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
S K+E D RS++VGNVDY T EE++ HF CG+VNRVTI +K+ G PKG+A
Sbjct: 56 ASATASQANKEEVDSRSVFVGNVDYACTPEEVQQHFQACGTVNRVTIRSDKY-GQPKGYA 114
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
Y+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 115 YVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNVPGM 152
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 93/131 (70%), Gaps = 12/131 (9%)
Query: 45 RVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGAT 104
RV EME EA KL+++Q+ +D+ +L+ E+K++ D RSI+VGNVDY +
Sbjct: 26 RVAEMEAEAAKLREMQASLDQARQ-----------DLT-EDKEDVDNRSIFVGNVDYSTS 73
Query: 105 AEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
EEL++HF CGS+NRVTIL +KF G PKG+AY+EF++ V A+ +++S+F+GR IKV
Sbjct: 74 PEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQALVLNDSVFKGRNIKV 133
Query: 165 NPKRTNRPGIS 175
PKRTN PG+S
Sbjct: 134 EPKRTNIPGMS 144
>gi|168066118|ref|XP_001784990.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663448|gb|EDQ50211.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 114/196 (58%), Gaps = 32/196 (16%)
Query: 9 IHEEENFENGDHIEN--GDMEAD------------QSKCTDEA---ELAAMKARVREMEE 51
+ EE GD E GD+E D TDEA EL MK R++EMEE
Sbjct: 1 MEEEHEVYGGDIPEEVEGDIEGDLDGEPDDLVLKGDDTTTDEAASKELEEMKKRLKEMEE 60
Query: 52 EAEKLKQLQSEVDKQM-----SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAE 106
EA L+ +Q++V+K+M S+G ++ N ++EAD RS++VGNVDY T E
Sbjct: 61 EAAALRDMQAKVEKEMGAVQDSVGKDGSATN--------REEADARSVFVGNVDYSCTPE 112
Query: 107 ELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNP 166
E++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ + ES R +KV
Sbjct: 113 EVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVTA 171
Query: 167 KRTNRPGISTTNRGGP 182
KRTN PG+ RG P
Sbjct: 172 KRTNVPGMKAY-RGRP 186
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 94/129 (72%), Gaps = 12/129 (9%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E++AMK RV EMEEEA KL+++Q+ +D+Q S +L E+K++ D RSI
Sbjct: 21 DEEEISAMKRRVAEMEEEAAKLREMQATLDQQ--------STDLR----EDKEDIDSRSI 68
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ E++++HF CGS+NRVTIL +KF GHPKG+AY+EF + V A+ ++E
Sbjct: 69 FVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNE 128
Query: 155 SLFRGRQIK 163
S+F+GR +K
Sbjct: 129 SVFKGRNLK 137
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 14/155 (9%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP--------------NSNNLLN 80
D+ + AM+AR++EME E K+ ++ + P + +
Sbjct: 9 DDDGINAMRARLQEMEAERAKIMEMTKASHSAAPVAGSPAVAPAQTSQGQATEDETGDAS 68
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
++ EE++ D RSIYVGNVDYGAT EEL+ F CG++NRVTILC+KF HPKGFAY+EF
Sbjct: 69 MTEEEREAIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPKGFAYVEF 128
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
++ V A++M+E+LFRGR I V KRTN PG+S
Sbjct: 129 SEPTFVANAISMNETLFRGRMILVKAKRTNVPGMS 163
>gi|126140476|ref|XP_001386760.1| hypothetical protein PICST_50467 [Scheffersomyces stipitis CBS
6054]
gi|126094044|gb|ABN68731.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 98/140 (70%), Gaps = 9/140 (6%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGS-PPNSNNLLNLSIEEKKEADLRSIYV 96
++ A + R++EME EA++L++L S++D+Q G P ++ EEK++ D RS+Y+
Sbjct: 41 QIHADEERLKEMEREADRLRELHSQLDEQQKGGDGIPQTD-------EEKRDIDSRSVYI 93
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDES 155
GNVDYG+T EL+ HF G V RVTIL NKF G PKGFAY+EF D D V A+A +D +
Sbjct: 94 GNVDYGSTPLELQQHFSSAGIVKRVTILTNKFTGQPKGFAYLEFDDVDGVNKAVATLDGT 153
Query: 156 LFRGRQIKVNPKRTNRPGIS 175
+FR R++KV+ KRTN PG+S
Sbjct: 154 VFRDRELKVSAKRTNIPGLS 173
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 104/156 (66%), Gaps = 7/156 (4%)
Query: 21 IENGDMEADQSKCTDE--AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
+E DM D ++ +E EL MK R++EME+EA L+++Q++V+K+M P +
Sbjct: 1 MEGEDMVMDGTEINEEEVPELDDMKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTAA-- 58
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
S ++E D RS++VGNVDY T EE++ HF CG+VNR+TI +K+ G PKG+AY+
Sbjct: 59 --ASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKY-GQPKGYAYV 115
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
EF + ++VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 116 EFLEPEAVQEALLLNESELHGRQLKVTAKRTNVPGM 151
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 115/192 (59%), Gaps = 10/192 (5%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
+E+ D++ S D AEL MK R+++ME+EA L+++Q++V+K+MS P S
Sbjct: 1 MEHDDVDMIGSDAND-AELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPAS---AA 56
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
S ++E D RS++VGNVDY T EE++ HF CG+VNR+TI +KF G PKG+AY+EF
Sbjct: 57 ASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF 115
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST--TNRGGPRGRGRGRVSRGAAMY- 197
+ ++VQ A+ ++ES GRQ+KV RTN PG+ R P R R A +
Sbjct: 116 VEPEAVQEALLLNESELHGRQLKVTAMRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFF 175
Query: 198 --GGYRPVRRAR 207
GY V R R
Sbjct: 176 SPYGYGKVPRFR 187
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 104/159 (65%), Gaps = 12/159 (7%)
Query: 23 NGDMEA-------DQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
+GDMEA + EL MK R++EME+EA L+++Q++V+K+M P +
Sbjct: 20 DGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPAS- 78
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
+ + K+E D RS++VGNVDY T EE++ HF CG+V+RVTIL +KF G PKGF
Sbjct: 79 ---IAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKF-GQPKGF 134
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
AY+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 135 AYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGL 173
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 104/159 (65%), Gaps = 12/159 (7%)
Query: 23 NGDMEADQSKCTDEA-------ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
+GDMEA A EL MK R++EME+EA L+++Q++V+K+M P +
Sbjct: 20 DGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPAS- 78
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
+ + K+E D RS++VGNVDY T EE++ HF CG+V+RVTIL +KF G PKGF
Sbjct: 79 ---IAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKF-GQPKGF 134
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
AY+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 135 AYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGL 173
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 96/140 (68%), Gaps = 8/140 (5%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
AEL AMKAR+ +ME EA KL++ Q + + ++G ++ L +++AD RS+YV
Sbjct: 31 AELEAMKARLAQMEAEANKLREQQGKGEDS-TLGRTDGADAAL------REDADNRSVYV 83
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
G VDY T EEL+ HF CG+VNRVTIL +KF G+PKG+AYIEF + D+V A+ +D S
Sbjct: 84 GQVDYACTPEELQMHFQSCGTVNRVTILTDKF-GNPKGYAYIEFLETDAVANALLLDSSE 142
Query: 157 FRGRQIKVNPKRTNRPGIST 176
RGR++KV PKRTN PG+
Sbjct: 143 LRGRELKVLPKRTNVPGLKV 162
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 86/125 (68%), Gaps = 12/125 (9%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E++++A KL++L +++ KQ S EEK + D RSIYVGNVDY ++ EE
Sbjct: 38 EVDDDAAKLRELHADLAKQESETQ------------EEKSDIDARSIYVGNVDYDSSPEE 85
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
L+ HF G +NRVTIL NKF G PKGFAYIEFA+ SV ++ +++S+FRGR +KVNPK
Sbjct: 86 LQKHFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNSLVLNDSVFRGRNLKVNPK 145
Query: 168 RTNRP 172
RTN P
Sbjct: 146 RTNIP 150
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 97/152 (63%), Gaps = 14/152 (9%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEV-----DKQMSMGSP--------PNSNNL-LN 80
D +EL +KAR+R MEEEA L+ LQ++ Q G+P PN + +
Sbjct: 23 DGSELEEIKARMRLMEEEAATLRSLQADAPVRAPSAQDGAGTPVPAPKEGEPNGEHEEIQ 82
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+ E +++ D RS+YVGNVDY AT ++ +HF CG +NRVTI+C+KF GHPKGF YIEF
Sbjct: 83 VEGEAQEDVDKRSVYVGNVDYSATPTDISNHFASCGQINRVTIVCDKFSGHPKGFCYIEF 142
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
A+ ++VQ A+ ++ES+ GR I V KRTN P
Sbjct: 143 AEPETVQNALLLNESMLCGRIISVVAKRTNIP 174
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 105/184 (57%), Gaps = 40/184 (21%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQM----------------------SMGSPPN- 74
+L MK R++E+EEEA L+++Q++ +K M S N
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNL 112
Query: 75 SNNLLNLSIE-----------EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
S NLL E EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTI
Sbjct: 113 SRNLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 172
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
L +KF G PKGFAY+EF + ++VQ ++ ++ES GRQIKV+ KRTN PG+ R
Sbjct: 173 LTDKF-GQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----R 226
Query: 184 GRGR 187
GRGR
Sbjct: 227 GRGR 230
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 31/167 (18%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEE-------------AEKLKQLQSEVDKQM 67
I +GD E + DE EL+ M+AR+ +ME E A K++ + E D M
Sbjct: 11 ISDGDDEVN----VDE-ELSLMQARLAQMEAEKNAIAAGGSKPSPAPKIQGEEGEGDASM 65
Query: 68 SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNK 127
P + D RS+Y+GNVDYGAT EE+++HF CG++NRVTILC+K
Sbjct: 66 EDEDAPAA-------------VDARSVYIGNVDYGATPEEIQAHFQACGTINRVTILCDK 112
Query: 128 FDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
F GHPKG+AY+EFA+ VQ A+ +++S+FRGR + V KRTN PG+
Sbjct: 113 FTGHPKGYAYVEFAEPSIVQNALVLNDSMFRGRLLSVREKRTNIPGM 159
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 22/180 (12%)
Query: 1 MSDQ--ENSFIHEEENFENGDHIE-NG-DMEADQSKCTDEA---ELAAMKARVREMEEEA 53
MSD E++ I E+ + D IE NG + E++ + TDEA EL MK R +EMEEE
Sbjct: 1 MSDTPVESTEIDEQSTEQLEDQIEENGVENESEATTNTDEAIDPELEEMKRRYKEMEEET 60
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
+KL +LQ+ VD +++E D RS+YVGNV+Y +T E++ ++F
Sbjct: 61 KKLNELQNSVDSN---------------GFGDQEEIDARSVYVGNVEYTSTQEDILAYFQ 105
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
CG+VNR+TIL +K GHPKG Y+EF D++SVQ A+ ++++ F RQIKV KRTN P
Sbjct: 106 SCGTVNRITILNDKTTGHPKGCCYVEFVDRESVQNALVLNDTTFNNRQIKVTAKRTNLPA 165
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
K D S+YVG VDY AT +EL+SHF CG++NRVTILC+KF G PKG+AYIEFADKD
Sbjct: 118 KSPDESSVYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGS 177
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGIST 176
+ A+A+D S F+GR +KV PKRTN PG+S
Sbjct: 178 ENALALDNSPFKGRNLKVTPKRTNVPGLSV 207
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 97/138 (70%), Gaps = 10/138 (7%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEA------DLRSIY 95
M+ +++E+E+EAE+L+Q+ +Q + G ++ N+ + +++A D RS+Y
Sbjct: 49 MQHKIQELEDEAERLRQM----TEQGATGDGDGVSDHENVEMTAEQQAAQSPEQDKRSVY 104
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VG+VDYGA EEL+ HF CG + R+TI+ +K+ GHPKGFAYIEF D+ +VQ A+ ++++
Sbjct: 105 VGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALLLNDT 164
Query: 156 LFRGRQIKVNPKRTNRPG 173
+FRGRQ+KV KRTN PG
Sbjct: 165 MFRGRQLKVLQKRTNLPG 182
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 12/168 (7%)
Query: 18 GDHIENGDMEADQSK----------CTDEAELAAMKARVREMEEEAEKLKQL--QSEVDK 65
GD I G ++A+ D+ ++ M+ +++E+E+EAE+L+Q+ Q
Sbjct: 13 GDTIVKGGLQAEHDDDDIDLDAAAGVVDDDDIMEMQHKIQELEDEAERLRQMTEQGGTGD 72
Query: 66 QMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILC 125
+ N+ + +E D RS+YVG+VDYGA EEL+ HF CG + R+TI+
Sbjct: 73 GDGVSDHENAEMTAEQQAAQSQEQDKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMV 132
Query: 126 NKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
+K+ GHPKGFAYIEF D+ +VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 133 DKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 180
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 17 NGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSN 76
+GD ++ E ++S EL MK R++EME+EA L ++Q++V+K+M GS + +
Sbjct: 2 DGDDVDMAAAETNESV----PELDDMKKRLKEMEDEAAALLEMQAKVEKEM--GSVQDPS 55
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
S ++E D RS++VGNVDY T EE++ HF CG++NR+TI +K+ G PKG+A
Sbjct: 56 ASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQACGTINRITIRSDKY-GQPKGYA 114
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAM 196
Y+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+ P G RGA M
Sbjct: 115 YVEFLEPETVQEALLLNESELHGRQLKVTVKRTNLPGMKQFRARRPNPY-MGFPPRGAPM 173
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 38 ELAAMKARVREMEEEAEKLKQL--QSEVDKQMSMGSPPNSNNLL-NLSIEEKKEADLRSI 94
E+ M+ +++E+E+EAE+L+Q+ Q + S S + + +E D RSI
Sbjct: 59 EIMEMQHKIQELEDEAERLRQMTEQGATGNGDATASDHESVEMTPEQQAAQSQEQDRRSI 118
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGNVDYG+ EEL+ HF CGS+ R+TI+ +K+ GHPKGFAYIEF D+ +VQ A+ +++
Sbjct: 119 YVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALLLND 178
Query: 155 SLFRGRQIKVNPKRTNRPG 173
++FRGRQ+KV KRTN PG
Sbjct: 179 TMFRGRQLKVLQKRTNLPG 197
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 86/124 (69%), Gaps = 9/124 (7%)
Query: 53 AEKLKQLQSEVDKQMSM-GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
A KL++L S++ +M G P ++ EEK++ D RSIY+GNVDYG+T EL+ H
Sbjct: 61 AAKLRELHSQLSNDTAMSGITPQTD-------EEKRDVDARSIYIGNVDYGSTPLELQQH 113
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTN 170
F CG VNRVTIL NK G PKGFAY+EFAD D V A+A +D S+FR RQ+KV+ KRTN
Sbjct: 114 FSSCGIVNRVTILMNKHTGQPKGFAYLEFADVDGVNKAVATLDGSMFRDRQLKVSAKRTN 173
Query: 171 RPGI 174
PGI
Sbjct: 174 IPGI 177
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 97/145 (66%), Gaps = 10/145 (6%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNN-------LLNLSIEEKK 87
++ EL MK R REMEEEA+KL +LQ+ ++ ++ + L+N +++
Sbjct: 40 EDPELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNT---DQE 96
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
E D RS+YVGNVDY +T +++ ++F CG+VNR+TIL +K GHPKG Y+EF +K+S+
Sbjct: 97 EIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESII 156
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRP 172
AMA+++S F RQ+K+ PKRTN P
Sbjct: 157 NAMALNDSFFNERQLKITPKRTNLP 181
>gi|167999063|ref|XP_001752237.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696632|gb|EDQ82970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 105/164 (64%), Gaps = 17/164 (10%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK R++EMEEEA L+ +Q++V+K+M GS + + + + ++EAD RS++VGNVDY
Sbjct: 1 MKKRLKEMEEEAAALRDMQAKVEKEMG-GS--QDSAITSGAQANREEADARSVFVGNVDY 57
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ + ES R
Sbjct: 58 SCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQNAILLSESELHNRP 116
Query: 162 IK-VNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVR 204
+K V KRTN PG+ G RG R A Y GYRP R
Sbjct: 117 LKVVTSKRTNVPGMK-----GFRG-------RPYAPYYGYRPRR 148
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 12/142 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE-----EKKEADLR 92
EL A+K +++EMEEEA ++K L +S SP + + + EK E D R
Sbjct: 1 ELDALKRKLKEMEEEAARVKALS------VSPRSPGGAAGAAAAAAQAQTEAEKAEVDSR 54
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SI+VGNVDYG T EEL+ HF CG+VNRVTIL +KF G+PK FAY+EF + D+V A+ +
Sbjct: 55 SIFVGNVDYGCTPEELQQHFASCGTVNRVTILTDKF-GNPKAFAYVEFLEVDAVNNAVLL 113
Query: 153 DESLFRGRQIKVNPKRTNRPGI 174
D S RGRQIKV+ KRTN PG+
Sbjct: 114 DNSELRGRQIKVSHKRTNVPGL 135
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 95/146 (65%), Gaps = 13/146 (8%)
Query: 27 EADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEK 86
E + S+ + EL MK R +E+EEE +KLK+LQ+ ++ G ++
Sbjct: 47 EDENSELNQDPELEEMKRRYKEIEEETQKLKELQNSLEANGGFGG-------------DQ 93
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
+E D RS+YVGNV+Y +T EE+ HF CG+++R+TIL +K GHPKG YIEF ++++V
Sbjct: 94 EETDGRSVYVGNVEYTSTQEEILLHFQPCGTIHRITILNDKMTGHPKGCCYIEFLEREAV 153
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRP 172
A+ ++E++F+ RQIKV PKRTN P
Sbjct: 154 TNALMLNETMFKDRQIKVTPKRTNLP 179
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 97/143 (67%), Gaps = 10/143 (6%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM---GSPPNSNNLLNLSIEEKKEADL 91
++ E+AAM+ R++EME+EAEKLK +VD M+ G P +K+EAD
Sbjct: 8 EDPEIAAMQRRLKEMEDEAEKLKGEHEKVDDAMAAEEAGKNPEEEAA------KKQEADA 61
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS+YVG VDY +T E+L + F G+VNRVTIL +KFD +PKGFAY+EF + D+V A+
Sbjct: 62 RSVYVGQVDYASTPEDLANAFASAGTVNRVTILHDKFD-NPKGFAYVEFLEPDAVHNAIL 120
Query: 152 MDESLFRGRQIKVNPKRTNRPGI 174
+D + RGR+IKV+ KRTN PG+
Sbjct: 121 LDGTEIRGRKIKVSAKRTNVPGM 143
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 8/136 (5%)
Query: 38 ELAAMKARVREMEE-EAEKLKQLQSEVDKQMSMGS-------PPNSNNLLNLSIEEKKEA 89
EL ++K ++ ME+ + + + Q+ +K+ S G+ P + + EK E
Sbjct: 124 ELESIKLKLWAMEQAQGPEPPRAQALAEKEESSGAMLAQQLLSPETGRPYPGTPVEKMEV 183
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RSIYVGNVDYG TA+ELE++F+ CG V RVTILC+KF GHPKG+AY+EFA + SVQ A
Sbjct: 184 DHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVEFASESSVQAA 243
Query: 150 MAMDESLFRGRQIKVN 165
+ +DES+FRGR IKV+
Sbjct: 244 VELDESIFRGRVIKVH 259
>gi|308479093|ref|XP_003101756.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
gi|308262666|gb|EFP06619.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
Length = 172
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 10/129 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMG--SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
EME EA+ LKQ+Q+++ + M++G +PP EE+K D +SI+VGNVDYGATA
Sbjct: 4 EMEAEAKILKQIQTKLFESMNVGKMTPPTE--------EEQKAIDAKSIFVGNVDYGATA 55
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
EELE HF+GCG + R TI +K K FAY+EF SV++A+ M+ S FRGRQI V
Sbjct: 56 EELEQHFNGCGVIVRTTIPKDKMTKRQKNFAYVEFECAASVESAIVMNSSTFRGRQIVVT 115
Query: 166 PKRTNRPGI 174
KRTN+PG+
Sbjct: 116 AKRTNKPGM 124
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 92/152 (60%), Gaps = 17/152 (11%)
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
SP S N+ + + E D RS+YVGNVDY +T EL+ HF CG++NR+TI+ +K+ G
Sbjct: 125 SPGGSQNVAGFANTDTDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTG 184
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR---------GG 181
HPKG+AYIEF + +VQ A+ + +++F+ RQIKV KR N PG + GG
Sbjct: 185 HPKGYAYIEFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGFARGRGWRGGRMAAAGG 244
Query: 182 PRGRGRGRVS------RGAAMYGGYRPVRRAR 207
GRGR + S RGA GG+RP+ R R
Sbjct: 245 MMGRGRPKRSLNLERDRGAR--GGFRPIYRPR 274
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 105/202 (51%), Gaps = 46/202 (22%)
Query: 5 ENSFIHEEENFE-NGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEV 63
+ S HEEENF D I N D E + +KLK +
Sbjct: 8 QESIKHEEENFRAQVDDINNIDKEFS----------------------DLQKLKMMNDGA 45
Query: 64 DKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
+ QM+ G P+S+ + E++E + RSI+VGNVDY EEL+S F CG +NRVTI
Sbjct: 46 EMQMNQGGAPDSHEM------EQEEINNRSIFVGNVDYSTQPEELQSLFSECGVINRVTI 99
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG---------- 173
L NK GH KG+AYIEFAD SV+TA+++ ES F+ RQIKV KR N PG
Sbjct: 100 LVNKNTGHSKGYAYIEFADPSSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRMSAFR 159
Query: 174 -------ISTTNRGGPRGRGRG 188
+S+ R GP RGRG
Sbjct: 160 GRVMKSPLSSRGRFGPFYRGRG 181
>gi|361128100|gb|EHL00053.1| putative E3 ubiquitin-protein ligase hulA [Glarea lozoyensis 74030]
Length = 1411
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 90/126 (71%), Gaps = 14/126 (11%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKE-ADLRSIYVG 97
++AMK RV EMEEEA KL+++Q+ +++Q + +++KKE D RSI+VG
Sbjct: 649 ISAMKRRVAEMEEEAAKLREMQATMEQQ-------------HQDLDDKKEDIDSRSIFVG 695
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
NVDY A+ EE+++HF CG +NRVTIL +KF GHPKG+AY+EF + + V A+ ++ES+F
Sbjct: 696 NVDYEASPEEIQAHFTTCGPINRVTILLDKFTGHPKGYAYVEFTEPNLVAQALVLNESVF 755
Query: 158 RGRQIK 163
RGR +K
Sbjct: 756 RGRNLK 761
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 10/150 (6%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIE---------EK 86
E +L A+K R+++MEEEA ++K L + G+ +N + EK
Sbjct: 37 ERDLDALKRRLKDMEEEAARIKALAGVATDGAAAGTSGAANGAAAAAAAAVAAAAADVEK 96
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
E D RSIYVGNVDYG T EEL+ HF CG+VNRVTIL +KF G+PKG+AY+EF + D+V
Sbjct: 97 AEIDSRSIYVGNVDYGCTPEELQQHFAQCGTVNRVTILTDKF-GNPKGYAYVEFLEVDAV 155
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGIST 176
Q A+ +D S RGRQ+KV KRTN PG+
Sbjct: 156 QNAVLLDNSELRGRQLKVLQKRTNVPGLKV 185
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 89/129 (68%), Gaps = 13/129 (10%)
Query: 49 MEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEEL 108
M+EE K+K++QSE+++ +S + E ++E D RSIYVGNVDYG+ AEEL
Sbjct: 1 MQEEHAKIKEMQSEIERNLSTVA------------ENQEEIDSRSIYVGNVDYGSVAEEL 48
Query: 109 ESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
E+HF G + R+TI +K G+PKGFAYIEF DK SV+ A+ ++ S FR R++KV KR
Sbjct: 49 ENHFKQAGDIIRITIKSDKM-GNPKGFAYIEFKDKSSVENALQLNGSTFRNRELKVFAKR 107
Query: 169 TNRPGISTT 177
TN PG+STT
Sbjct: 108 TNIPGLSTT 116
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 103/179 (57%), Gaps = 30/179 (16%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+GDM+ A A+++E++E KLK++Q D +S
Sbjct: 15 EDGDMDGADVD---MAAAGDDAAKLQELDEMKRKLKEMQG-CDPSIS------------- 57
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K++ D RS+YVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 58 TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKF-GQPKGFAYVEFL 116
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
++++VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 117 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 163
>gi|308459095|ref|XP_003091873.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
gi|308254853|gb|EFO98805.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
Length = 182
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E++ EA LK++Q+ + ++M +G L + EE+K D +SI+VGNVDYGAT EE
Sbjct: 16 ELQAEARVLKEIQNRLSEKMEIGK-------LTPTEEEQKAIDAKSIFVGNVDYGATVEE 68
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
LE+HF GCG++ R TI +KF K FAYIEF SV+ A M+ S+FRGRQI V K
Sbjct: 69 LEAHFMGCGTIVRTTIPKDKFTKKQKNFAYIEFESVASVENATVMNASIFRGRQIVVTAK 128
Query: 168 RTNRPGI 174
RTN+PG+
Sbjct: 129 RTNKPGL 135
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 23/200 (11%)
Query: 11 EEENFENGDHIENGDMEAD--QSKCTDEA---ELAAMKARVREMEEEAEKLKQLQSEVDK 65
EE D GD++AD S D+ EL MK R++EMEEEA L+++Q++V+K
Sbjct: 4 EEHEVYGADIPVEGDLDADVDMSAADDDPAVKELDEMKKRLKEMEEEAAALREMQAKVEK 63
Query: 66 QM-SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTIL 124
+M ++ P ++ +L N K+E D RS + + A ++ + F CG VNRVTIL
Sbjct: 64 EMGAVQDPASAADLAN-----KEEVDARSFLLAMLIMLAPRKKSSNIFQSCGIVNRVTIL 118
Query: 125 CNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
+KF G PKGFAY+EF ++++VQ A+ ++ES GRQ+KV+PKRTN PG+ +
Sbjct: 119 TDKF-GQPKGFAYVEFVEQEAVQQALLLNESELHGRQLKVSPKRTNVPGLK-------QF 170
Query: 185 RGRGRVSRGAAMYGGYRPVR 204
RGR RG Y +RP R
Sbjct: 171 RGR----RGFNPYMPFRPRR 186
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEADLRS 93
+EA+L MK R++EME+EA LK++Q++V+K+M S+ P N++ S ++E D RS
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASA----SQINREEVDARS 69
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGNVDY T E+++ HF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++
Sbjct: 70 IFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFVEVEAVQEALLLN 128
Query: 154 ESLFRGRQIKV 164
ES GRQ+KV
Sbjct: 129 ESELHGRQLKV 139
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 16/129 (12%)
Query: 74 NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
NS+N + E K+E D RS++VGNVDY T EE++ HF+ CG+VNRVTIL +KF G PK
Sbjct: 105 NSSNPNATTSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPK 163
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG 193
GFAY+EF + ++VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 164 GFAYVEFVEVEAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG------- 211
Query: 194 AAMYGGYRP 202
+ YRP
Sbjct: 212 ---FNPYRP 217
>gi|146413939|ref|XP_001482940.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
gi|146392639|gb|EDK40797.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
Length = 220
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 107/178 (60%), Gaps = 16/178 (8%)
Query: 1 MSDQENSFIHEEE-NFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQL 59
MSD+ + + ++ E D + D E K EAE+ +K R+ EME EA KL++L
Sbjct: 21 MSDEISMEVQQQPVAVEIADSSTSVDKEMTSEKQM-EAEM--IKQRMEEMEREAAKLREL 77
Query: 60 QSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
+++ + + EE+++ D RSIY+GNVDYGAT EL+ HF G VN
Sbjct: 78 HAQLSEDKGGDTE-----------EERRDIDSRSIYIGNVDYGATPLELQQHFSSSGVVN 126
Query: 120 RVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM-DESLFRGRQIKVNPKRTNRPGIST 176
RVTIL NK G PKGFAY+EFAD D V A+A D S F GR++KV+ KRTN PG+++
Sbjct: 127 RVTILTNKHTGQPKGFAYLEFADVDGVNKAVATQDGSSFHGRELKVSAKRTNIPGVNS 184
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 103/179 (57%), Gaps = 30/179 (16%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNL 81
E+GDM+ A A+++E++E KLK+++ G P S
Sbjct: 15 EDGDMDGADVD---MAAAGDDAAKLQELDEMKRKLKEMEG--------GDPSIS------ 57
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ E K++ D RS+YVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 58 TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKF-GQPKGFAYVEFL 116
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
++++VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 117 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 163
>gi|325087930|gb|EGC41240.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 170
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 90/131 (68%), Gaps = 12/131 (9%)
Query: 26 MEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEE 85
+E + +E E+AAMK RV EME EA KL+++Q+ +D+Q S +L E+
Sbjct: 12 LETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQ--------SESLR----ED 59
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
K++ D RSI+VGNVDYGA+ EE+++HF CGS+NRVTIL +KF GHPKG+AY+EF +
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSL 119
Query: 146 VQTAMAMDESL 156
V A+ ++E +
Sbjct: 120 VAQALVLNERM 130
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
+ +KLK + + QM+ P+S+ + E++E + RSI+VGNVDY EEL+S
Sbjct: 32 DLQKLKMMNDGAEMQMNQTGAPDSHEM------EQEEINNRSIFVGNVDYSTQPEELQSL 85
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
F CG +NRVTIL NK GH KG+AYIEFAD SV+TA+++ ES F+ RQIKV KR N
Sbjct: 86 FSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESFFKKRQIKVCSKRRNI 145
Query: 172 PGISTTNRGGPRGR 185
PG + G RGR
Sbjct: 146 PGFNRPRMGAFRGR 159
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 29/222 (13%)
Query: 1 MSDQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQ 60
M+D+E+ +E + E+ DM A + EL MK R++EMEEEA L+++Q
Sbjct: 1 MADEEHEVYGQEIPLDG----EDVDMGAPGDEAAKMQELDEMKRRLKEMEEEANALREMQ 56
Query: 61 SEVDKQM---SMGSPPNSNNLLN--------LSIEEK-----KEADLRSIY----VGNVD 100
++V K+M ++ +S NL + +S + + LRS + VD
Sbjct: 57 TKVAKEMQGCNLLVLISSLNLADCVDVLQNVISFHQSVNPSTNDVSLRSWHRVMIAQRVD 116
Query: 101 YGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGR 160
Y T EE++ HF+ CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES GR
Sbjct: 117 YACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQEAVKLNESELHGR 175
Query: 161 QIKVNPKRTNRPGISTTNRGGPRGRGRGRVSR--GAAMYGGY 200
QIKV PKRTN PG+ RGG RG G R GA Y Y
Sbjct: 176 QIKVAPKRTNVPGMKQP-RGG-RGFGGHPYMRPYGAPFYNPY 215
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 11/135 (8%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMS---------MGSPPNSNNLLNLSIEEKKE 88
EL A+K ++ ME AE L + Q V ++ + + SP + +EK E
Sbjct: 83 ELEAIKLKLWAMEH-AETLPE-QPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKEKVE 140
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD RS+YVGNVDYG +A EL ++F CG ++RVTILC+KF GHPKG+AYIEFA ++SVQ
Sbjct: 141 ADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQA 200
Query: 149 AMAMDESLFRGRQIK 163
A+ +DES FRGR IK
Sbjct: 201 AVELDESTFRGRVIK 215
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
+ +KLK + + QM+ G +S+ +E++E + RSI+VGNVDY EEL+S
Sbjct: 37 DLQKLKMMNEGAEIQMNQGGNVDSHE------QEQEEINNRSIFVGNVDYSTQPEELQSL 90
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
F CG +NRVTIL NK GH KG+AYIEFAD SV+TA+++ ES F+ RQIKV KR N
Sbjct: 91 FSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNI 150
Query: 172 PGISTTNRGGPRGRGRGRV--SRGAAMYGGYRPVRRAR 207
PG + RGRG RG +RP R R
Sbjct: 151 PGFNRPKISPFRGRGMKSALGVRGRLRQPSFRPFYRGR 188
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 18/148 (12%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQL-----------------QSEVDKQMSMGSPPNSN- 76
D+ E+ M+ +V+EME + + + +E + S GS P +N
Sbjct: 15 DDREIEEMRRQVQEMERDLARENEAAELAALANHPSLAGPPNDTETAAKTSGGSTPGANA 74
Query: 77 NLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
+ +AD RSIYVGNVDYGAT EE+++HF CG++NRVTIL +KF GHPKG+A
Sbjct: 75 DASGADFSTDDDADARSIYVGNVDYGATPEEIQAHFASCGTINRVTILLDKFTGHPKGYA 134
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKV 164
Y+EFA V+ A+ ++ESLFRGR IKV
Sbjct: 135 YVEFAQPAHVEAALVLNESLFRGRLIKV 162
>gi|308459121|ref|XP_003091886.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
gi|308254866|gb|EFO98818.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
Length = 183
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 8/130 (6%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E+E EA LKQ+Q+++ ++M M +PP EE+K D +S+++GNV+YGAT EE
Sbjct: 17 ELEAEAVVLKQIQNKLSEKMGMMTPPTE--------EEQKAIDAKSVFIGNVEYGATIEE 68
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
LE HF GCG++ R TI +K K FAYIEF SV A+ M+ S+FR R+I V K
Sbjct: 69 LEQHFKGCGTIVRTTIPKDKVTKKQKNFAYIEFESSASVDNAIVMNGSIFRDRKIVVTSK 128
Query: 168 RTNRPGISTT 177
RTN+PG+ T
Sbjct: 129 RTNKPGMGAT 138
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 86/128 (67%), Gaps = 11/128 (8%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSM---GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGAT 104
E+EEE L+ +Q ++ ++++ SPP S EE+KE D RS++VGNVD+G+T
Sbjct: 14 EIEEERLVLQDMQKKMAEELNKSERASPP--------STEEQKEIDARSVFVGNVDFGST 65
Query: 105 AEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
EELE+HF GCG++ R TI +K+ K FAYIEF DKDSV+ A+ M E++FR R+I V
Sbjct: 66 IEELEAHFKGCGTITRTTIPKDKYTQRQKNFAYIEFEDKDSVEMALVMHETMFRDRRIVV 125
Query: 165 NPKRTNRP 172
KRTN P
Sbjct: 126 TAKRTNVP 133
>gi|443922030|gb|ELU41543.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 203
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 86/136 (63%), Gaps = 11/136 (8%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMGSPPNSNNLLNLSIEEKKE-ADLR 92
EL MKARVREME EAEKL+ Q Q +++N EE E D R
Sbjct: 19 ELEQMKARVREMEAEAEKLRTMTAQAQPGSGPGSVGSGGGDASNEFG---EESAEIVDAR 75
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI-EFADKDSVQTAMA 151
S+YVGNVDYGAT EEL++HF G++NR+TILC+KF GHPKGF +I F V+T A
Sbjct: 76 SVYVGNVDYGATPEELQAHFQAVGTINRITILCDKFTGHPKGFVWIFWFISGLDVETGTA 135
Query: 152 --MDESLFRGRQIKVN 165
+++SLFRGR IKV+
Sbjct: 136 EVLNDSLFRGRAIKVS 151
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 71/92 (77%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E ++E D RSIYVGNV+Y AT EE+++ F CG V R+ I+ +KF GHPKGF Y+EFA+
Sbjct: 3 ESREEVDARSIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAEP 62
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
++V AMA+DES+F GRQIKV KRTN PG++
Sbjct: 63 NAVPLAMALDESMFHGRQIKVKSKRTNLPGLA 94
>gi|334188311|ref|NP_001190512.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008657|gb|AED96040.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 142
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+S EK+E D RSIYVGNVDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF
Sbjct: 7 VSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 65
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
+ ++VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 66 VEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 107
>gi|303280321|ref|XP_003059453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459289|gb|EEH56585.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 92/129 (71%), Gaps = 13/129 (10%)
Query: 49 MEEEAEKLKQLQSEVDKQMSM---GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
ME+EA KL+ +Q++V+++M+ G+ N+N ++EAD RSI+VG VDY T
Sbjct: 1 MEDEANKLRDMQAKVEEEMNTIPGGAEANAN---------REEADSRSIHVGGVDYACTP 51
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
EEL+ HF CG+VNRVTIL +K++ +PKGFAY+EF + D+V A+ ++++ GR+IKV+
Sbjct: 52 EELQMHFQSCGTVNRVTILTDKYE-NPKGFAYVEFLEADAVANALLLNDTEVHGRKIKVS 110
Query: 166 PKRTNRPGI 174
KRTN PG+
Sbjct: 111 AKRTNVPGM 119
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
Query: 80 NLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
++ +EE ++ D RS+YVGNVDY +EL+ F G +NR+TI+ +K+ GHPKG+AYIE
Sbjct: 26 DVDMEENEDVDKRSVYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYIE 85
Query: 140 FADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 189
F+ +D+V A+ ++ESLF+ R IKV PKR N PG+ R P GR RGR
Sbjct: 86 FSSEDAVNNAVMLNESLFKERIIKVTPKRKNIPGLG---RKRPTGRSRGR 132
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 87/128 (67%), Gaps = 11/128 (8%)
Query: 48 EMEEEAEKLKQLQSEVDKQMS---MGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGAT 104
E+++E L+++Q ++ ++++ +PP S+EE+KE D RSI+VGNVD+G+T
Sbjct: 16 EIDQERLVLQEMQEKMAEELNRSGKATPP--------SLEEQKEIDARSIFVGNVDFGST 67
Query: 105 AEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
+ELE+HF GCG + R TI NKF K FAYIEF DK+SV+ A+ M ES+FR R+I V
Sbjct: 68 VDELEAHFKGCGVITRATIPKNKFSQRQKNFAYIEFEDKNSVEMALLMHESIFRDRKIVV 127
Query: 165 NPKRTNRP 172
KRTN P
Sbjct: 128 TAKRTNVP 135
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 17 NGDHIENGDMEADQSKCTDEAEL-AAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPP-- 73
+G G +E ++ EL A++ R +E+EE +L++L+ ++ PP
Sbjct: 17 SGHRARIGRIEEGETDHPSAVELRASLYTRDQEIEEMRRRLRELE-----KLEFEIPPAP 71
Query: 74 ----NSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
S + + +K E D+RSIYVGNVDY + EE++ HF CG++NRVTIL + F
Sbjct: 72 SHEEESETAVAATTVDKAEVDVRSIYVGNVDYACSPEEVQQHFQFCGTINRVTILTDSF- 130
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 189
G PKGFAY+EF + ++VQ A+ ++E+ GR +KV PKRTN PG+ + RGR
Sbjct: 131 GQPKGFAYVEFDEVEAVQNALLLNETELHGRPLKVCPKRTNIPGMK-------QSRGRHS 183
Query: 190 VSRGAAMYGGYRPVRR 205
V YG RR
Sbjct: 184 VYPFYPSYGKVPRFRR 199
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
+ +KLK + + QM+ +S+ + E++E + RSI+VGNVDY EEL+S
Sbjct: 37 DLQKLKMMNEGAEMQMNQSGALDSHEM------EQEEINNRSIFVGNVDYSTQPEELQSL 90
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
F CG +NRVTIL NK GH KG+AYIEFAD SV+TA+++ ES F+ RQIKV KR N
Sbjct: 91 FSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNI 150
Query: 172 PGISTTNRGGPRGRGRGRV--SRGAAMYGGYRPVRRAR 207
PG + RGR RG +RP R R
Sbjct: 151 PGFNRPKISPFRGRSMKATLGPRGRLRQPSFRPFYRGR 188
>gi|397625742|gb|EJK67902.1| hypothetical protein THAOC_10991, partial [Thalassiosira oceanica]
Length = 525
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGS-PPNSNNLLNLSIEEKKEADLRSIYV 96
+L ++A + MEEEA ++ Q +++K G+ S+ + + + D S+YV
Sbjct: 346 DLEKLQAEIARMEEEAARIAQETEDLEKSKDGGTDAAKSDESKTAAAADGTKKDGHSVYV 405
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
G VDY +T EEL +HF CG+V RVTI+C+KF G PKGFAY+EF ++ +V+ A+ +D S
Sbjct: 406 GQVDYSSTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEFQNESAVENAIKLDGST 465
Query: 157 FRGRQIKVNPKRTNRP 172
F+ RQ+KV PKR N P
Sbjct: 466 FKERQLKVTPKRVNDP 481
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 52 EAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
+ +KLK + D QM+ +S+ + E++E + RSI+VGNVDY EEL+S
Sbjct: 37 DLQKLKMMNEGADMQMNHSGGLDSHEM------EQEEINNRSIFVGNVDYSTQPEELQSL 90
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
F CG +NRVTIL NK GH KG+AYIEFAD SV+TA+++ ES F+ RQIKV KR N
Sbjct: 91 FSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNI 150
Query: 172 PGISTTNRGGPRGRG--RGRVSRGAAMYGGYRPVRRAR 207
PG + RGR RG +RP R R
Sbjct: 151 PGFNRPRISPFRGRSIKPSFAPRGRLRQPSFRPFYRGR 188
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 13/158 (8%)
Query: 30 QSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQ-------MSMGSPPNSNNLLNLS 82
Q + + + + + + E+E+E +L++L + +D Q + NS + +
Sbjct: 19 QPQSSTQEQSQPQELTIEELEQEKRRLQELDAVLDAQDHNTYTNPDLVDSSNSGDASGVP 78
Query: 83 IE-----EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
E++E+D RS+Y+GNVDY T EL+ HF G+VNRVTI+ NK G PKGFAY
Sbjct: 79 TAAQLDAERRESDARSVYIGNVDYPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKGFAY 138
Query: 138 IEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGI 174
+EF+D DS+ A+A +D S+FR R +KV PKRTN PG+
Sbjct: 139 LEFSDVDSMNKAVATLDGSIFRDRPLKVLPKRTNIPGV 176
>gi|255731418|ref|XP_002550633.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131642|gb|EER31201.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 203
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 88/132 (66%), Gaps = 12/132 (9%)
Query: 45 RVREMEEEAEKLK-QLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGA 103
++ ++E+EA KL+ QLQ+E +N + L+ E+K+++D RSIY+GNVDYG
Sbjct: 36 KMEQVEQEAAKLREQLQAE----------STNNGVSFLTDEQKRDSDSRSIYIGNVDYGT 85
Query: 104 TAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQI 162
EL+ HF G V+RVTI+ +K G KGFAY+EF D +SVQ A+ +D S FR RQ+
Sbjct: 86 LPIELQQHFSSAGVVSRVTIMTDKITGQAKGFAYLEFVDAESVQKAVDTLDGSTFRERQL 145
Query: 163 KVNPKRTNRPGI 174
KV+ KRTN PGI
Sbjct: 146 KVSAKRTNIPGI 157
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E K+E D R ++VGNVDY T EE++ HF+ CG VNRVTIL +KF G PKGFAY+EF +
Sbjct: 148 ENKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKF-GQPKGFAYVEFVEV 206
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 197
++VQ A+ ++ES GRQ+KV KRTN PG+ PRGRG + A +Y
Sbjct: 207 EAVQEAIKLNESELHGRQLKVALKRTNIPGMKQ-----PRGRGFNQYRPYAFLY 255
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E K+E D R ++VGNVDY T EE++ HF+ CG VNRVTIL +KF G PKGFAY+EF +
Sbjct: 193 ENKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKF-GQPKGFAYVEFVEV 251
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 197
++VQ A+ ++ES GRQ+KV KRTN PG+ PRGRG + A +Y
Sbjct: 252 EAVQEAIKLNESELHGRQLKVALKRTNIPGMKQ-----PRGRGFNQYRPYAFLY 300
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 88/127 (69%), Gaps = 11/127 (8%)
Query: 49 MEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEEL 108
+++E ++L++LQ+E ++ S +N+ + + D RS+YVGNV+Y AT + L
Sbjct: 9 LDDEFDELQRLQNE-----TLDSTDRTNDT------SQDDVDRRSVYVGNVEYSATPQNL 57
Query: 109 ESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
+ +F CG +NR+TI+ +K+ GHPKG+AYIEFA ++SV+ A+ ++E+LF+ R IKV KR
Sbjct: 58 QEYFKSCGQINRITIMVDKWTGHPKGYAYIEFAQEESVENALLLNETLFKERLIKVTSKR 117
Query: 169 TNRPGIS 175
N PG+S
Sbjct: 118 KNIPGMS 124
>gi|308459109|ref|XP_003091880.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
gi|308254860|gb|EFO98812.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
Length = 205
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGS--PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E+E EA+ L+ +Q+ + + M +G PP EE+K D RS++VGNVD+G+T
Sbjct: 38 EIEAEAKVLRDIQNRLSESMEIGKTVPPTE--------EEQKAIDARSVFVGNVDFGSTI 89
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
EELE+HF GCG + R+TI +K K FAY+EF SV+ AM M+ S FR RQI V
Sbjct: 90 EELEAHFKGCGEIVRITIPKDKLTKKQKNFAYVEFESSASVENAMVMNGSAFRERQIVVT 149
Query: 166 PKRTNRPGI 174
KRTN+PG+
Sbjct: 150 AKRTNKPGM 158
>gi|354544353|emb|CCE41076.1| hypothetical protein CPAR2_300650 [Candida parapsilosis]
Length = 217
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
EE++++D RSIY+GNVDY AT EL+ HF G VNRVTI+ NK G PKGFAY+EF+D
Sbjct: 86 EERRDSDARSIYIGNVDYQATPLELQEHFSPAGIVNRVTIMTNKITGQPKGFAYMEFSDV 145
Query: 144 DSVQTAMA-MDESLFRGRQIKVNPKRTNRPGIS 175
+ V A+ +D+S+FR R++KV PKRTN PGI+
Sbjct: 146 EGVNAAVKELDDSVFRDRRLKVLPKRTNIPGIN 178
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 88/138 (63%), Gaps = 6/138 (4%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
AEL MK R+ MEEEA+KLK + + M+ G + + + + RS++V
Sbjct: 32 AELEEMKKRLAAMEEEAQKLKDEANAIGDDMNTGDGASGAADADRAEADS-----RSVHV 86
Query: 97 GNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESL 156
G VDY T EEL HF CG+VNRVTIL +K+D +PKGFAY+EF + D+VQ A+ + ++
Sbjct: 87 GGVDYATTPEELAKHFEACGTVNRVTILTDKYD-NPKGFAYVEFLEADAVQNAIKLTDTE 145
Query: 157 FRGRQIKVNPKRTNRPGI 174
GR+++V+ KRTN PG+
Sbjct: 146 IHGRKLRVSAKRTNVPGM 163
>gi|308459099|ref|XP_003091875.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
gi|308254855|gb|EFO98807.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
Length = 188
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 10/121 (8%)
Query: 56 LKQLQSEVDKQMSMG--SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
LKQ+Q+ + ++M +G +PP EE+KE D RSI++GNV++GAT EELE HF
Sbjct: 25 LKQIQNRLAEKMEVGKTAPPTE--------EEQKEIDARSIFIGNVEFGATVEELEDHFK 76
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
GCG + R TI +K K +A+IEF DSV+ AM M+ S FR RQI V KRTN+PG
Sbjct: 77 GCGEIVRTTIPKDKLTKKQKNYAFIEFESSDSVENAMVMNGSTFRERQIVVTSKRTNKPG 136
Query: 174 I 174
+
Sbjct: 137 M 137
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 9/120 (7%)
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
++LKQLQ D QM NN ++ D RSIYVGNVDY +EL+ F
Sbjct: 13 DELKQLQGMTDCQMLTDDMDTDNN---------EDVDKRSIYVGNVDYSTKPQELQEFFK 63
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
G +NR+TI+ +K+ GHPKG+AY+EF+++D+V A+ ++ESLF+ R IKV PKR N PG
Sbjct: 64 SSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPKRKNIPG 123
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
E++E + RSI+VGNVDY EEL+S F CG +NRVTIL NK GH KG+AYIEFAD
Sbjct: 22 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 81
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR 185
SV+TA+++ ES F+ RQIKV KR N PG + RGR
Sbjct: 82 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFRGR 122
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D SIYVG VDY T EEL +HF CG+V RVTI+C+KF G PKGFAY+EF ++ SV+ A
Sbjct: 1 DNYSIYVGQVDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLEFENESSVENA 60
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGIS 175
+ +DES F+GRQ+K+ KR N+PG++
Sbjct: 61 LKLDESEFKGRQLKITHKRVNQPGMA 86
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQM--SMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E+++E L+++Q ++ +Q+ S +PP S ++E+KE D RSI+VGNVD+G+T
Sbjct: 14 EIDQERLVLQEMQEKMAEQLNRSGKAPPPS-------LDEQKEIDARSIFVGNVDFGSTV 66
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ELE+HF GCG + R TI +K+ K FAYIEF +K+SV+ A+ M E+ FR RQI V
Sbjct: 67 DELEAHFKGCGLITRTTIPKDKYSQRQKNFAYIEFEEKESVEMALIMHETTFRDRQIVVT 126
Query: 166 PKRTNRP 172
KRTN P
Sbjct: 127 AKRTNVP 133
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 26/169 (15%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM------------GSP-------- 72
C+ ++ A +R +EE+ +KL E+ K M GSP
Sbjct: 54 CSGGSDSALRADGMRALEEQVQKLDSDWDELQKLQYMTEEAAYSFVQGGGSPHAAGASGG 113
Query: 73 ------PNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
S L + E D RS+YVGNVDY +T EL+ HF CG++NR+TI+ +
Sbjct: 114 ADGTGSAGSQTLGGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVD 173
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
K+ GHPKG+AYIEF + +VQ A+ + +++F+ RQIKV KR N PG +
Sbjct: 174 KYTGHPKGYAYIEFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGFA 222
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 10/129 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMG--SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E++ EA LKQ+Q+++ + M G + P EE+K D +SI+VGNVD+GAT
Sbjct: 16 ELQAEARVLKQIQTKLSETMETGKKTLPTE--------EEQKSIDAKSIFVGNVDFGATV 67
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
ELE+HF+GCG + R I NK K FAYIEF D+ + AM M+ S FRGR I V
Sbjct: 68 AELEAHFYGCGQIVRTRIPKNKMTNRQKNFAYIEFECADNAENAMVMNGSTFRGRPIVVT 127
Query: 166 PKRTNRPGI 174
KRTN+PG+
Sbjct: 128 TKRTNKPGM 136
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 9/122 (7%)
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
++LKQLQ D QM ++ + ++ D RSIYVGNVDY +EL+ F
Sbjct: 13 DELKQLQGMTDCQMVTD---------DMDTDNHEDVDKRSIYVGNVDYSTKPQELQEFFK 63
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
G +NR+TI+ +K+ GHPKG+AY+EF+++D+V A+ ++ESLF+ R IKV PKR N PG
Sbjct: 64 SSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPKRKNIPG 123
Query: 174 IS 175
+
Sbjct: 124 FN 125
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 26/169 (15%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSM------------GSP-------- 72
C+ ++ A +R +EE+ +KL E+ K M GSP
Sbjct: 54 CSGGSDSALRADGMRALEEQVQKLDSDWDELQKLQYMTEEAAYSFVQGGGSPHAAGASGG 113
Query: 73 ------PNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN 126
S L + E D RS+YVGNVDY +T EL+ HF CG++NR+TI+ +
Sbjct: 114 ADGTGSAGSRTLGGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVD 173
Query: 127 KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
K+ GHPKG+AYIEF + +VQ A+ + +++F+ RQIKV KR N PG +
Sbjct: 174 KYTGHPKGYAYIEFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGFA 222
>gi|268536830|ref|XP_002633550.1| Hypothetical protein CBG05418 [Caenorhabditis briggsae]
Length = 181
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 7/125 (5%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E+E EA L+ +Q+++ ++M+ + P + EE+KE D RS++VGNVD+G+T E
Sbjct: 12 EIEAEAAVLRDIQNKMAEKMAAKTVPQTA-------EEQKEIDARSVFVGNVDFGSTIAE 64
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
++ HF GCG + R TI +KF K FAYIEF +S++ A+ M+ SLFR RQI V K
Sbjct: 65 IQDHFKGCGVIVRTTIPKDKFTKRQKNFAYIEFESSESIENALVMNGSLFRARQIVVTAK 124
Query: 168 RTNRP 172
RTN P
Sbjct: 125 RTNVP 129
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 84/139 (60%), Gaps = 10/139 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGS--PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E+E E+ L+Q+Q+++ K + + PP EE+K D +S+++GNVD+ +T
Sbjct: 17 EIEAESAILQQIQNKMAKHLESAAYVPPTE--------EEQKAIDAKSVFIGNVDFNSTI 68
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
EE+E HF GCG + + TI +KF K FAYIEF D S++ A+ M+ SLFR R I V
Sbjct: 69 EEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVT 128
Query: 166 PKRTNRPGISTTNRGGPRG 184
KRTN PG+ RG RG
Sbjct: 129 AKRTNIPGMGHGVRGSSRG 147
>gi|115402163|ref|XP_001217158.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
gi|114189004|gb|EAU30704.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
Length = 185
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 23/142 (16%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D RSI+VGN
Sbjct: 26 IAAMKRRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDARSIFVGN 73
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
VDYGA+ EE+++HF CGS+NRVTIL +KF G PKG ++Q+ + S +
Sbjct: 74 VDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGMP------TSNLQSPVWWPNSGVK 127
Query: 159 GR-----QIKVNPKRTNRPGIS 175
+ Q +V PKRTN PG+S
Sbjct: 128 RKCVPWSQSEVVPKRTNLPGMS 149
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 20/160 (12%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
EM ++LK+LQ + QM+ S EE E D RSIYVGNVDY +
Sbjct: 7 EMVILDDELKKLQGMTECQMADESADQ---------EENDEVDRRSIYVGNVDYSTKPHD 57
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
L+ F G +NR+TI+ +K+ G PKG+AYIEFA +D+V A+ +++ LF+ R IKV PK
Sbjct: 58 LQEFFKASGQINRITIMVDKWTGKPKGYAYIEFASEDAVNNAVMLNDCLFKERIIKVIPK 117
Query: 168 RTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVRRAR 207
R N PG + RGRGR G+RP+R R
Sbjct: 118 RKNIPGYNRKRAQPSRGRGR-----------GFRPMRGGR 146
>gi|17532829|ref|NP_495021.1| Protein EEED8.12 [Caenorhabditis elegans]
gi|2500592|sp|Q09301.1|YQOC_CAEEL RecName: Full=Putative RNA-binding protein EEED8.12
gi|351060993|emb|CCD68740.1| Protein EEED8.12 [Caenorhabditis elegans]
Length = 197
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 84/139 (60%), Gaps = 10/139 (7%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGS--PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E+E E+ L+Q+Q+++ K + + PP EE+K D +S+++GNVD+ +T
Sbjct: 23 EIEAESAILEQIQNKMAKNLESAAYVPPTE--------EEQKAIDAKSVFIGNVDFNSTI 74
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
EE+E HF GCG + R TI +KF K FAYIEF D S++ A+ M+ SLFR R I V
Sbjct: 75 EEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVT 134
Query: 166 PKRTNRPGISTTNRGGPRG 184
KRTN PG+ RG RG
Sbjct: 135 AKRTNIPGMGHGVRGSSRG 153
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
+++E D RSIYVGNVDY +T +++ ++F CG+VNR+TIL +K GHPKG Y+EF +K+
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKE 60
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
S+ AMA+++S+F RQIK+ PKRTN P N GG R
Sbjct: 61 SINNAMALNDSIFNDRQIKITPKRTNLP-YYMRNPGGTR 98
>gi|149234716|ref|XP_001523237.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453026|gb|EDK47282.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 334
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
Query: 69 MGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKF 128
+ P S++L+ S E K+E+D +SIY+GNVDYG+T EL+ HF CG + +VTIL NKF
Sbjct: 165 LAHPAASSHLI--SDEAKRESDAKSIYIGNVDYGSTPLELQQHFSLCGIIEKVTILNNKF 222
Query: 129 DGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGIS 175
G PKG AY+ F D++SV A+A +D S+FR R++KV KRTN PGI+
Sbjct: 223 TGRPKGVAYLAFQDQESVDKAIATLDGSIFRDRELKVMHKRTNIPGIT 270
>gi|396461545|ref|XP_003835384.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
gi|312211935|emb|CBX92019.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
Length = 186
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 33/141 (23%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
+E E++AM+ RV+EME+EA KL+++Q +D N + E K++ D RS+
Sbjct: 24 EEEEISAMRRRVQEMEDEAAKLREMQQSLD------------NERHEMRESKEDVDARSV 71
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDYGA+ EE+++HF GS+NRVTIL +KF GHPKG
Sbjct: 72 FVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKG-------------------- 111
Query: 155 SLFRGRQIKVNPKRTNRPGIS 175
FR R +KV PKRTN PG++
Sbjct: 112 -QFRDRNLKVVPKRTNLPGMT 131
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS++VGNVDY T EE++ HF CG+VNRVTI NK+ G PKG+AY+EF + ++
Sbjct: 50 REEVDSRSVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKY-GQPKGYAYVEFLETEA 108
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 109 VQEALLLNESELHGRQLKVSAKRTNVPGL 137
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS++VGNVDY T EE++ HF CG+VNRVTI NK+ G PKG+AY+EF + ++
Sbjct: 57 REEVDSRSVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKY-GQPKGYAYVEFLETEA 115
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 116 VQEALLLNESELHGRQLKVSAKRTNVPGL 144
>gi|345309223|ref|XP_003428805.1| PREDICTED: polyadenylate-binding protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 86
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 56 LKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGC 115
+ +L EV + +S PP S + +SIEEK EAD RSIYVGNVDYGATAEELE+HFHGC
Sbjct: 8 VAELVREVIQALSPTPPPPSAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGC 67
Query: 116 GSVNRVTILCNKFDGHPKG 134
GSVNRVTILC+KF GHPKG
Sbjct: 68 GSVNRVTILCDKFSGHPKG 86
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS++VGNVDY T EE++ HF CG+VNRVTI NK+ G PKG+AY+EF + ++
Sbjct: 51 REEVDSRSVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKY-GQPKGYAYVEFLETEA 109
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 110 VQEALLLNESELHGRQLKVSAKRTNVPGL 138
>gi|268536758|ref|XP_002633514.1| Hypothetical protein CBG05376 [Caenorhabditis briggsae]
Length = 182
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 60 QSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
Q+E+ ++M M + ++ + EE+KE D RS+++GNVD+G++ E++E HF GCG +
Sbjct: 26 QNEIAEKMEMPT-----KMIPPTAEEQKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEII 80
Query: 120 RVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
R TI +KF K FAYIEFA +S++ A+ M+ SLFR RQI V KRTN+P
Sbjct: 81 RTTIPKDKFTKKQKNFAYIEFASAESIENALVMNGSLFRSRQIVVTAKRTNKP 133
>gi|268536756|ref|XP_002633513.1| Hypothetical protein CBG05375 [Caenorhabditis briggsae]
Length = 180
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 11/116 (9%)
Query: 60 QSEVDKQMSMGS---PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCG 116
Q+E+ ++M M + PP + EE+KE D RS+++GNVD+G++ E++E HF GCG
Sbjct: 27 QNEIAEKMKMPTKMIPPTA--------EEQKEIDSRSVFIGNVDFGSSIEDIEEHFKGCG 78
Query: 117 SVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
+ R TI +KF K FAYIEFA +S++ A+ M+ SLFR RQI V KRTN+P
Sbjct: 79 EIIRTTIPKDKFTKKQKNFAYIEFASAESIENALVMNGSLFRSRQIVVTAKRTNKP 134
>gi|308459113|ref|XP_003091882.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
gi|308254862|gb|EFO98814.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
Length = 186
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E++ EA LKQ+Q+ + +M MG + + EE+K D +SI+VGNV+YGAT EE
Sbjct: 16 ELQAEAVVLKQIQNRLAAKMEMGK------VCLPTEEEQKVIDAKSIFVGNVEYGATTEE 69
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
LE HF GCG + R TI +K K FAY+EF SV+ A+ M+ S FRGR I V K
Sbjct: 70 LEDHFKGCGEIVRTTIPKDKMTNRQKNFAYVEFECAASVENAILMNGSTFRGRPIVVTAK 129
Query: 168 RTNRP 172
RTN+P
Sbjct: 130 RTNKP 134
>gi|308459125|ref|XP_003091888.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
gi|308254868|gb|EFO98820.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
Length = 185
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E++ EA LKQ+Q+ + +M +G + + EE+K D RS++VGNV++GAT EE
Sbjct: 16 ELQAEAVVLKQIQNSLAAKMEIGK------VCLPTEEEQKAIDSRSVFVGNVEFGATVEE 69
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
LE+HF GCG + R TI +K K FAYIEF SV+ A M+ S FRGR I V K
Sbjct: 70 LETHFKGCGEIVRTTIPKDKMTNRQKNFAYIEFECAASVEYAAVMNGSTFRGRPIVVTAK 129
Query: 168 RTNRPGISTTNRG----GPRGRG 186
RTN+PG+ G RGRG
Sbjct: 130 RTNKPGMGAARGRGGYEGFRGRG 152
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 51 EEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELES 110
EE E LKQ S K M+ P + EE+++ D RS+YVGNVD+ +T E+E
Sbjct: 17 EEMELLKQALSASKKYMA----PTA--------EEQEKTDARSVYVGNVDWKSTVSEIEE 64
Query: 111 HFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
HF CG V RVTI +KF G+ K FA++EF +SVQ A+ + ++FR R+I V KRTN
Sbjct: 65 HFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKIMVTLKRTN 124
Query: 171 RPGISTT 177
+PG+ T
Sbjct: 125 KPGMGRT 131
>gi|238605300|ref|XP_002396414.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
gi|215468958|gb|EEB97344.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
Length = 216
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 14/104 (13%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG--------- 134
E+K AD RSIYVGN E+++ HF CG++NRVTILC+KF GHPKG
Sbjct: 75 EDKTGADNRSIYVGNTTV-RHPEDIQGHFSACGTINRVTILCDKFTGHPKGNSITEMFSK 133
Query: 135 -FAYIEFADKDSVQTAMAMDESLFRGRQIKVNP---KRTNRPGI 174
+AY+EFA+ + V TA+ MD SLF GR IKV P KRTN PG
Sbjct: 134 RYAYVEFAEPEHVDTALTMDNSLFHGRLIKVQPVTAKRTNVPGF 177
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 21/157 (13%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDK-----------------QMSMGSPPNSNNLLN 80
E+ MK ++ EME EA L++ + +D Q G P + L
Sbjct: 7 EILKMKEKLAEMEREASSLREQEQGIDGKALDEEMAKHHHSDNNGQGQGGKPQKTPEELE 66
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
E++E D RS++VG VDYGA L HF CG+VNRVTIL +KF+ +PKGFAY+EF
Sbjct: 67 KEKAERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTDKFE-NPKGFAYVEF 125
Query: 141 ADKDSVQTAMAMDES---LFRGRQIKVNPKRTNRPGI 174
+KD+V A+ +D + F R++KV+ KRTN PG+
Sbjct: 126 LEKDAVDAAVLLDGTGLEEFPQRKLKVSAKRTNVPGM 162
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIY+GNVDYG EL+ F CGS+NR+TI+ +K G PKGFAY+EF + ++V+TA+
Sbjct: 111 RSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALK 170
Query: 152 MDESLFRGRQIKVNPKRTNRPG 173
D ++FRGRQIKV+ KR N PG
Sbjct: 171 FDGAMFRGRQIKVSTKRKNIPG 192
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIY+GNVDYG EL+ F CGS+NR+TI+ +K G PKGFAY+EF + ++V+TA+
Sbjct: 110 RSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALK 169
Query: 152 MDESLFRGRQIKVNPKRTNRPG 173
D ++FRGRQIKV+ KR N PG
Sbjct: 170 FDGAMFRGRQIKVSTKRKNIPG 191
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 9/122 (7%)
Query: 54 EKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFH 113
++LK+L+ D Q + ++ + ++ D RSIYVGNVDY +EL+ F
Sbjct: 13 DELKRLKGMTDSQYATE---------DMDTDTNEDVDRRSIYVGNVDYSTKPQELQEFFK 63
Query: 114 GCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
G +NR+TI+ +K+ GHPKG+AY+EF+ +D+V A+ +++SLF+ R IKV PKR N PG
Sbjct: 64 SSGQINRITIMVDKWTGHPKGYAYVEFSSEDAVGNAVMLNDSLFKERIIKVIPKRKNIPG 123
Query: 174 IS 175
+
Sbjct: 124 FN 125
>gi|326482748|gb|EGE06758.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 122
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKGF
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGFV 111
>gi|302659609|ref|XP_003021492.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
gi|291185395|gb|EFE40874.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
Length = 126
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKGF
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGFV 111
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
E K+ + S P ++ + +++ ++EAD RSIY+GNVDY +T E+LE+ F G+V RV
Sbjct: 23 EPAKETGLDSEPEKSS--DSTLQAQEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRV 80
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQIKVNPKRTNRPG 173
TIL +KF G PKG+AY+EF + +S Q A+ ++ S FRGR+++V KRTN PG
Sbjct: 81 TILFDKFSGFPKGYAYVEFEEYESAQKAIEELNGSPFRGRELRVMTKRTNIPG 133
>gi|302503907|ref|XP_003013913.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
gi|291177479|gb|EFE33273.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
Length = 303
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 26/144 (18%)
Query: 35 DEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
DE E+AAM+ R+ +ME EA KL ++Q+ +D+Q + NL E+K++ D RSI
Sbjct: 22 DEEEIAAMRERLTKMESEAAKLHEMQASLDQQ--------TENLR----EDKEDIDARSI 69
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
+VGNVDY A+ EE+++HF CGS+NRVTIL +KF GHPKG A+++S+
Sbjct: 70 FVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKG------AERESLPWEEYKGV 123
Query: 155 SLFRGRQ--------IKVNPKRTN 170
+ RQ +V PKRTN
Sbjct: 124 CYYSWRQKSADANKPSQVVPKRTN 147
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSIY+GNVDYG EL+ F CGS+NR+TI+ +K G PKGFAY+EF + ++V TA+
Sbjct: 66 RSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVDTALK 125
Query: 152 MDESLFRGRQIKVNPKRTNRPGIS 175
D ++FRGRQIKV KR N PG +
Sbjct: 126 FDGAMFRGRQIKVCSKRKNIPGFT 149
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++EAD RS+YVGNVDY AT E+LE F G ++RVTIL +K+ G PKG+AY+EF + +S
Sbjct: 29 QEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFENIES 88
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRP 172
V A+ + FRGR+I+V+PKRTN P
Sbjct: 89 VNKAVDLHGKEFRGREIRVSPKRTNIP 115
>gi|198426504|ref|XP_002123932.1| PREDICTED: similar to zinc finger CCCH-type containing 14 [Ciona
intestinalis]
Length = 842
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 16/171 (9%)
Query: 25 DMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSE----VDKQMSMGSPPNSNNLLN 80
D E D + +D+ EL M+ ++ +M+EEA+KLK LQ+E +++ +S+ + N +
Sbjct: 640 DQEPDNVESSDQ-ELMNMREKLLKMQEEAKKLKILQTEQLALLERTVSLKTAENKPSAT- 697
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+ +D +SI++ NV + +T ++L HF CG V R TIL + F GHPKGFAY++F
Sbjct: 698 -----AENSDEKSIHIANVHFSSTEKQLSEHFSICGKVVRATILKDAFTGHPKGFAYLQF 752
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 191
+ SV A+A D + F R IKV K++N I+ T P R R RVS
Sbjct: 753 EEASSVDMALAFDGTTFCSRAIKVT-KKSNE-AIAKT---APAARPRYRVS 798
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
IE +KE D RS+Y+GNVDY T EELE F G++NRVTIL ++F G PKG+AY+EF
Sbjct: 63 IEAQKETDSRSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFES 122
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
+ SV +A+ + F+ R I VN KRTN P
Sbjct: 123 QSSVDSAIGLSGQEFKDRIISVNIKRTNVP 152
>gi|47230518|emb|CAF99711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 38 ELAAMKARVREMEEEAE--KLKQLQ-SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSI 94
EL A+KARV+E+E E E +LK+ + E + M P N++ EE+ +AD RS+
Sbjct: 1 ELTAIKARVQELEMEEETERLKEDERCEAGELQLMTCSPRPGPFYNMTPEERIDADNRSV 60
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
YVGNVDYGATA+ELE HF+GCG VNRVTILC++F GHPKGF
Sbjct: 61 YVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFC 102
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 13/105 (12%)
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V VDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF ++++VQ A+ ++ES
Sbjct: 9 VLQVDYACTPEEVQQHFQACGTVNRVTILTDKF-GQPKGFAYVEFLEQEAVQEALNLNES 67
Query: 156 LFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
GRQIKV+PKRTN PG+ + R RG + Y Y
Sbjct: 68 ELHGRQIKVSPKRTNVPGM------------KQRPPRGFSPYHAY 100
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ +++E D RSIYVGNVDY +T E+LE FH G + RVTIL +K+ G PKG+AY+EF
Sbjct: 25 LAKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEK 84
Query: 143 KDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGI 174
+SV A+ + FRGR+++V PKRTN PG
Sbjct: 85 IESVNKAVEDLHGKEFRGREVRVTPKRTNLPGF 117
>gi|50307397|ref|XP_453677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642811|emb|CAH00773.1| KLLA0D13772p [Kluyveromyces lactis]
Length = 345
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 67/120 (55%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+E++ E D RSI+VGN+ ATAE LE HF CG V RVTIL NK G PKG+AYIEF
Sbjct: 94 LEKQIELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTILYNKLTGAPKGYAYIEFES 153
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
DS+ A+ + +S G I V KRTN PG + PR +G M Y P
Sbjct: 154 SDSIPKALELKDSELHGETINVAKKRTNVPGYNNNKNYYPRKEWVYPGWQGNVMRQWYYP 213
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS+YVGNVDY +T E+LE FHG G + RVTIL ++F G PKG+AYIEF +S
Sbjct: 22 QEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQTES 81
Query: 146 VQTAM-AMDESLFRGRQIKVNPKRTNRP 172
VQ A+ + FRGR+++V KRTN P
Sbjct: 82 VQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS+YVGNVDY +T E+LE FHG G + RVTIL ++F G PKG+AYIEF +S
Sbjct: 22 QEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQTES 81
Query: 146 VQTAM-AMDESLFRGRQIKVNPKRTNRP 172
VQ A+ + FRGR+++V KRTN P
Sbjct: 82 VQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 11/138 (7%)
Query: 46 VREMEEEAEKLKQLQSEVDK---QMSMGSPPNSNN--------LLNLSIEEKKEADLRSI 94
+ +M++E K +Q ++E+DK Q GS +++ L + ++ E D RSI
Sbjct: 34 LAQMQKELAKAEQQKAELDKLNKQQGSGSAGSADGKSGGEDSELSAAAAADQAERDSRSI 93
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
++GNVD+ A+ EE+++ F CG +N +TI +KF G KGFAY+EFADK SV AM +
Sbjct: 94 FIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMAMEKNN 153
Query: 155 SLFRGRQIKVNPKRTNRP 172
+L R R IKV KRTN P
Sbjct: 154 ALLRDRAIKVVNKRTNLP 171
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
PP L ++E D RS+Y+GNVDY A +L+ CG +NR+TIL +K G
Sbjct: 7 PPQQPRLAPNQPSNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGK 66
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
P+G+A++EF + Q A+AM+ + FRGR + V PKRTN PGI+ R
Sbjct: 67 PRGYAFVEFETHEGAQKAVAMNGTEFRGRTLTVTPKRTNYPGITNARR 114
>gi|344302535|gb|EGW32809.1| hypothetical protein SPAPADRAFT_60154 [Spathaspora passalidarum
NRRL Y-27907]
Length = 171
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RSIYVGNVDY +T E+LE FH G + RVTIL ++F G PKG+AYIEF S
Sbjct: 27 QEEIDSRSIYVGNVDYQSTPEQLEQFFHVVGIIERVTILFDRFSGLPKGYAYIEFEKSVS 86
Query: 146 VQTAM-AMDESLFRGRQIKVNPKRTNRPGI 174
VQ A+ ++ FRGR+++V KRTN PG
Sbjct: 87 VQQAIDELNGKEFRGRELRVTSKRTNLPGF 116
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ +++E D RS+YVGNVDY +T E+LE FHG G + RVTIL ++F G PKG+AYIEF
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 143 KDSVQTAM-AMDESLFRGRQIKVNPKRTNRP 172
+SVQ A+ + FRGR+++V KRTN P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|334187575|ref|NP_001190273.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004147|gb|AED91530.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 128
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
+VDY T EE++ HF CG+VNRVTIL +KF G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 6 HVDYACTPEEVQLHFQTCGTVNRVTILMDKF-GQPKGFAYVEFVEVEAVQEALQLNESEL 64
Query: 158 RGRQIKVNPKRTNRPGISTTNRG 180
GRQ+KV+PKRTN PG+ + G
Sbjct: 65 HGRQLKVSPKRTNVPGMKQYHPG 87
>gi|344228071|gb|EGV59957.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 242
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
+ V + + + P +S + ++E D RS+YVGNV++ +T +LE FH G + R
Sbjct: 31 TTVPESTPIPAEPTPQTTETISPKVQEEVDSRSVYVGNVNFTSTPVQLEEFFHSVGVIER 90
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGIS 175
+TIL ++F G PKG+AYIEF ++ Q A++ +D +FR R++KV KRTN PG+S
Sbjct: 91 ITILFDRFTGIPKGYAYIEFNSEEGAQKAISELDGKVFRNRELKVTAKRTNFPGMS 146
>gi|388627|gb|AAA28862.1| putative, partial [Drosophila melanogaster]
Length = 48
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 47/48 (97%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
S+YVGNVDYGA+AEELE+HFHGCG++NRVTILCNK DGHPKGFAYIEF
Sbjct: 1 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEF 48
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+E+++E D RS+YVGNVDY +T E+LE FH G + RVTIL ++F G PKG+AYIEF
Sbjct: 20 LEKQQEIDNRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIEFET 79
Query: 143 KDSVQTAM-AMDESLFRGRQIKVNPKRTNRPGI 174
++S A+ +D F+GR ++++ KRTN PG
Sbjct: 80 EESAVKAIEELDGKEFKGRALRISKKRTNLPGF 112
>gi|120537458|gb|AAI30002.1| LOC390748 protein [Homo sapiens]
Length = 255
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 38 ELAAMKARVREMEEEAEKLK----QLQSEVDKQMSMG---SPPNSNNLLNLSIEEKKEAD 90
EL A+K +V ME+ + Q Q+E ++ + G SP L+ + EEK EAD
Sbjct: 86 ELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEAD 145
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV-QTA 149
RS+YVGNVDYG +AEELE+HF CG V+RVTILC+KF GHPKG E S QTA
Sbjct: 146 HRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGCCRKEPTSLGSAPQTA 205
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 190
A +++ G P + +R GP +GR
Sbjct: 206 GAFEDTQAPG----------GHPSPTAASRAGPGSDHKGRT 236
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ +++E DLRS+YVGNVDY +T E++E FH G V RVTIL +KF G PKG+AY+EF
Sbjct: 57 LAKQEETDLRSVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVEFQT 116
Query: 143 KDSVQTAM-AMDESLFRGRQIKVNPKRTNRPGI 174
++ + A+ + FRGR+++V+ KRTN PG
Sbjct: 117 PENAKKAVEELHGESFRGRELRVSEKRTNLPGF 149
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS+YVGNVDY +T E+LES F G + R+TIL +K+ G PKG+AY+EF +S
Sbjct: 48 QEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEIPES 107
Query: 146 VQTAM-AMDESLFRGRQIKVNPKRTNRP 172
V+ A+ + FRGR ++V PKRTN P
Sbjct: 108 VEKAIEELHGKEFRGRDLRVTPKRTNLP 135
>gi|403357954|gb|EJY78612.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403360696|gb|EJY80032.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403365989|gb|EJY82785.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403375247|gb|EJY87595.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 183
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 16/130 (12%)
Query: 43 KARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYG 102
K + + E + E+L++L++EV++ S E++++AD RS++V NVDY
Sbjct: 30 KDDIADFESKQEELRKLENEVEE----------------SKEDQEDADERSVFVKNVDYS 73
Query: 103 ATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQI 162
A EL+ HF CG V RVTI +K PKG A+IEF ++ Q A + +SLF+GRQI
Sbjct: 74 AEPAELKDHFKECGEVKRVTIPVDKASQQPKGHAFIEFTTIEAAQKAKRLTDSLFKGRQI 133
Query: 163 KVNPKRTNRP 172
V PKR N P
Sbjct: 134 TVIPKRKNIP 143
>gi|126136038|ref|XP_001384543.1| hypothetical protein PICST_45495 [Scheffersomyces stipitis CBS
6054]
gi|126091741|gb|ABN66514.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
S P + + +++E D RSIYVGNVDY +T E+LE FH G + RVTIL +++ G
Sbjct: 13 SAPETEEERAARLAKQEEIDGRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRYSG 72
Query: 131 HPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRP 172
PKG+AY+EF +SV+ A+ + FRGR+I+V+ KRTN P
Sbjct: 73 LPKGYAYVEFEKTESVERAIEDLHGKEFRGREIRVSAKRTNLP 115
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
L+ EE++ RSI++ NVDY T +LE HF CG + R TI +K G P G AYIEF
Sbjct: 214 LTPEEEELTLARSIFIKNVDYKTTKNDLEDHFKECGQITRCTIATDKHSGQPLGHAYIEF 273
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
A + Q + ++ESLF+GRQI V PKR N+P
Sbjct: 274 ATLEGAQRSKLLNESLFKGRQITVQPKRKNKP 305
>gi|308456413|ref|XP_003090648.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
gi|308261959|gb|EFP05912.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
Length = 197
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 31/149 (20%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E+E EA LK++Q ++ + M +G + EE+K D +SI+VGNVD+GAT E
Sbjct: 17 EIEAEARVLKEIQMKLSETMDVGKVSSPTE------EEQKAIDAKSIFVGNVDFGATVAE 70
Query: 108 LESHFHGCGSVNRVT-------------------ILCNKFDGHPKGFAYIEFADKDSVQT 148
LE+HF GCG + R+T IL +++ +A+IEF SV
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILLSEY------YAFIEFESAGSVAN 124
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTT 177
A+ M+ S FR RQI V KRTN+PG+ T
Sbjct: 125 AIVMNGSTFRERQIVVTLKRTNKPGMGAT 153
>gi|432104867|gb|ELK31379.1| Embryonic polyadenylate-binding protein 2 [Myotis davidii]
Length = 161
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
VDYG A ELE++F+ CG V +VTILCNKF GHPKG+AYIEFA + S Q A+ +D+S+F
Sbjct: 32 QVDYGVIAGELEAYFNICGEVQQVTILCNKFSGHPKGYAYIEFATESSAQAAVGLDKSIF 91
Query: 158 RGRQIKV 164
+GR IKV
Sbjct: 92 QGRVIKV 98
>gi|296087007|emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
N+ +L + +K ++ + + VDY T EE++ HF CG+VNRVTIL +K+ G PKGF
Sbjct: 2 NDCCHLQVMWQKTLNVEKL-IHFVDYACTPEEVQQHFQSCGTVNRVTILTDKY-GQPKGF 59
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
AY+EF + ++VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 60 AYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGM 98
>gi|308448720|ref|XP_003087733.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
gi|308253205|gb|EFO97157.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
Length = 194
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
E+E EA LK++Q ++ + M +G + EE+K D +SI+VGNVD+GAT E
Sbjct: 17 EIEAEARVLKEIQMKLSETMDVGKVSSPTE------EEQKAIDAKSIFVGNVDFGATVAE 70
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGF----------AYIEFADKDSVQTAMAMDESLF 157
LE+HF GCG + R+TI +K K + A+IEF SV A+ M+ S F
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIEFECAASVANAIVMNGSTF 130
Query: 158 RGRQIKVNPKRTNRPGISTT 177
R RQI V KRTN+PG+ T
Sbjct: 131 RERQIVVTLKRTNKPGMGAT 150
>gi|2058693|gb|AAB53328.1| poly A binding protein [Rattus norvegicus]
Length = 85
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 22 ENGDMEADQSK-CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLN 80
E G +E D ++ EL A+KARVREMEEEA+KLK+LQ+EV KQM M PP + +
Sbjct: 2 EPGLVETDPGDGAIEDPELEAIKARVREMEEEADKLKELQNEVXKQMXMSPPPGNAGPVI 61
Query: 81 LSIEEKKEADLRSIYVGNVDYGAT 104
+S+EEK EAD RSIYVGNVDYGAT
Sbjct: 62 MSLEEKMEADARSIYVGNVDYGAT 85
>gi|359497541|ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 98 NVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLF 157
VDY T EE++ HF CG+VNRVTIL +K+ G PKGFAY+EF + ++VQ A+ ++ES
Sbjct: 8 QVDYACTPEEVQQHFQSCGTVNRVTILTDKY-GQPKGFAYVEFLEVEAVQEALLLNESEL 66
Query: 158 RGRQIKVNPKRTNRPGI 174
GRQ+KV KRTN PG+
Sbjct: 67 HGRQLKVLAKRTNVPGM 83
>gi|83032973|ref|XP_729274.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23486584|gb|EAA20839.1| RNA recognition motif [Plasmodium yoelii yoelii]
Length = 77
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R +Y GNVDY EEL+S F CG +NRVTIL NK GH KG+AYIEFAD SV+TA++
Sbjct: 3 RYLY-GNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALS 61
Query: 152 MDESLFRGRQIKV 164
+ ES F+ RQIKV
Sbjct: 62 LSESFFKKRQIKV 74
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 80 NLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
N I ++KE D RSI+V NV+Y T EEL F CG + ++TI + G KGFAYI+
Sbjct: 47 NDEIIQQKEEDKRSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTR-QGQGKGFAYIQ 105
Query: 140 FADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
F DK SV+ A A+ +S+ RGR IKV PKRTN+ G
Sbjct: 106 FVDKSSVELAKALSDSIHRGRAIKVLPKRTNQHGF 140
>gi|367017760|ref|XP_003683378.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
gi|359751042|emb|CCE94167.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
Length = 275
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Query: 59 LQSEVDKQMSMGSPPNSNNLLNLSIEEKK----EADLRSIYVGNVDYGATAEELESHFHG 114
LQ+ D +S+ PN+N L LS EE+ EAD RSI+VGN+ T E ++ HF
Sbjct: 42 LQAVAD--LSIDEKPNANGLPKLSREERYAAQVEADSRSIFVGNITPEITPEIIDEHFKD 99
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
CG + R+T+L +K G PKG+AY+EF + D+ + A+ + S +G +I V KRTN PG
Sbjct: 100 CGVIERITLLYDKNTGAPKGYAYVEFENADAQEKALEHNGSELKGGKISVYKKRTNLPG 158
>gi|168038419|ref|XP_001771698.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677005|gb|EDQ63481.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 746
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
MK R+R+++ + KL+ Q+EV K++ ++ +++ + RS++V NV +
Sbjct: 508 MKKRLRQVQLDMTKLRARQAEVSKEVQNSPAAGVRSIPFEPQPSQEDINDRSVFVTNVHF 567
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
AT L HF GCG VNRVT+L G PKG A++EF KD+V+ A+A++ES R
Sbjct: 568 AATQAALRVHFGGCGYVNRVTLLVEPATGKPKGSAFVEFTTKDAVENALALNESSLLSRN 627
Query: 162 IKVNPKRTN------RPGISTTNRGGPRGRGRGR 189
+KV K + P +S++ P RG R
Sbjct: 628 LKVMRKDSAIAEMNPDPSLSSSFIPPPFSRGHPR 661
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
++E D RS+YVGN+DY AT +L+ CG +NR+TIL N + G KGFAY+EF D +
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEG 135
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
+ A+ ++ + R + + KRTN PG+
Sbjct: 136 AKAAIELNGTELYSRALTIQQKRTNIPGM 164
>gi|254568026|ref|XP_002491123.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238030920|emb|CAY68843.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352350|emb|CCA38749.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 293
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGNV A EEL G VNRVTIL + + GHPKG+AY+EF ++ SV A
Sbjct: 127 DKRSVFVGNVHSSADPEELVQIMTKAGVVNRVTILLDHYTGHPKGYAYVEFEEEASVPKA 186
Query: 150 MAM-DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 188
+ + + +F+ +++ V PKRTN PG++ + PRG RG
Sbjct: 187 IELFHQYVFKEKELNVVPKRTNVPGLA---KRHPRGAHRG 223
>gi|326513590|dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 84/139 (60%), Gaps = 10/139 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ +K +++++E + KL+ Q++++ KQ ++ S P+SN +EE +AD R++
Sbjct: 463 EMLDVKLKLKQVELDMLKLRSKQAQINNGKQGALPSGPHSN------LEE--DADARTVL 514
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V NV + AT E L +HF CG+V ++ +L + GHPKG A++ FADK+S+ A+++ +
Sbjct: 515 VTNVHFAATKEALSTHFMKCGTVLKLNMLTDAITGHPKGAAFVTFADKESIGRALSLSGT 574
Query: 156 LFRGRQIKVNPKRTNRPGI 174
F R + V K PG
Sbjct: 575 SFYSRVLTVMRKAEAPPGF 593
>gi|308479279|ref|XP_003101849.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
gi|308262759|gb|EFP06712.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
Length = 169
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMG--SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
E+E EA+ LK++Q+++ ++M G +PP EE+K D +SI+V NV++GAT
Sbjct: 18 ELEAEAKVLKEIQTKMFEKMDTGKMTPPTE--------EEQKAIDAKSIFVSNVEFGATI 69
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRG 159
EEL+ HF GCG + R TI +K K +A+IEF SV+ A M+ S FRG
Sbjct: 70 EELKQHFKGCGEIVRTTIPKDKHTKKQKNYAFIEFDSASSVENAAVMNGSTFRG 123
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S E ++EAD RS++V NVDYG + +L+ F CG V R+TI G PKGFAY+EF
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITI-GRGPTGQPKGFAYVEFT 169
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
D+ +V+TA + + +GRQ+ V KRTN P
Sbjct: 170 DEAAVETAKGLTNQMLKGRQVTVLNKRTNVP 200
>gi|45187874|ref|NP_984097.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|27475785|gb|AAO16965.1|AF384990_2 Yib1 [Eremothecium gossypii]
gi|44982658|gb|AAS51921.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|374107313|gb|AEY96221.1| FADR001Cp [Ashbya gossypii FDAG1]
Length = 324
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
E D RS++V ++ ATAE LE HF G ++R+TIL NK G PKG+AYI+F SV+
Sbjct: 79 ELDSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESISSVE 138
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGI 174
A+ +D S F G I V KRTN PG
Sbjct: 139 KALQLDGSSFNGNTISVAKKRTNLPGF 165
>gi|115457640|ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|38347198|emb|CAD40523.2| OSJNBa0023J03.10 [Oryza sativa Japonica Group]
gi|113563991|dbj|BAF14334.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|116308926|emb|CAH66055.1| OSIGBa0125J07.4 [Oryza sativa Indica Group]
gi|116309108|emb|CAH66214.1| OSIGBa0096F13.9 [Oryza sativa Indica Group]
gi|215695292|dbj|BAG90483.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222628583|gb|EEE60715.1| hypothetical protein OsJ_14219 [Oryza sativa Japonica Group]
Length = 649
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ +K +++++E + KL+ Q++++ KQ + S P++N ++E +AD R++
Sbjct: 467 EMLDVKLKLKQVELDVLKLRSKQAQINNVKQGFLSSGPHAN------LDE--DADSRTVL 518
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V NV + AT E L HF CG+V ++ IL + GHPKG A++ F DK+SV+ A+++ S
Sbjct: 519 VTNVHFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGS 578
Query: 156 LFRGRQIKVNPKRTNRPGI 174
F R + V K PG
Sbjct: 579 SFFSRVLTVMRKAEAPPGF 597
>gi|223999207|ref|XP_002289276.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
gi|220974484|gb|EED92813.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 42 MKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDY 101
++A ++ MEEEA ++ Q +++K + EK D SIYVG VDY
Sbjct: 25 LQAEIKRMEEEAARIAQETEDLEKPAAAAGGGGEKKD---GAAEKASKDGHSIYVGQVDY 81
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
T EEL +HF CG+V RVTI+C+KF G PKGFAY+EF
Sbjct: 82 STTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEF 120
>gi|215765000|dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ +K +++++E + KL+ Q++++ KQ + S P++N ++E +AD R++
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINNVKQGFLSSGPHAN------LDE--DADSRTVL 235
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V NV + AT E L HF CG+V ++ IL + GHPKG A++ F DK+SV+ A+++ S
Sbjct: 236 VTNVHFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGS 295
Query: 156 LFRGRQIKVNPKRTNRPGI 174
F R + V K PG
Sbjct: 296 SFFSRVLTVMRKAEAPPGF 314
>gi|218194572|gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indica Group]
Length = 366
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ +K +++++E + KL+ Q++++ KQ + S P++N ++E +AD R++
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINNVKQGFLSSGPHAN------LDE--DADSRTVL 235
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V NV + AT E L HF CG+V ++ IL + GHPKG A++ F DK+SV+ A+++ S
Sbjct: 236 VTNVHFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGS 295
Query: 156 LFRGRQIKVNPKRTNRPGI 174
F R + V K PG
Sbjct: 296 SFFSRVLTVMRKAEAPPGF 314
>gi|357162450|ref|XP_003579415.1| PREDICTED: uncharacterized protein LOC100842396 [Brachypodium
distachyon]
Length = 641
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVD--KQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+ +K ++++ME + KL+ Q++++ KQ + S PNSN +E+ +AD R++
Sbjct: 460 EMLDVKLKLKQMELDMLKLRSKQAQINNGKQGAPPSGPNSN------LED--DADSRTVL 511
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
V NV + AT E L +HF CG V + +L + GHPKG A++ FADK+S+ A+++ +
Sbjct: 512 VTNVHFAATKEALSTHFMKCGRVLKNIVLTDANTGHPKGAAFVTFADKESIGRAISLSGT 571
Query: 156 LFRGRQIKVNPKRTNRPG--ISTTNRGGPRGRGRGRVSRGAA 195
F R + V K PG +S G P+ +GA+
Sbjct: 572 SFYSRVLTVVRKAEAPPGFLVSVQQTGMPQPWNSPPFQKGAS 613
>gi|390478033|ref|XP_002761311.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Callithrix jacchus]
Length = 212
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 88/178 (49%), Gaps = 43/178 (24%)
Query: 38 ELAAMKARVREMEEEAEKL-------KQLQSEVDKQM-SMGSPPNSNNLLNLSIEEKKEA 89
EL A+K +V ME+ AE L + L+ E D + SP + + + EEK EA
Sbjct: 54 ELEAIKMKVWAMEQ-AEGLPWPPGAQRLLREEEDAVAGQLLSPETTGYPIGGTPEEKVEA 112
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RSIYVGNVDYG +AEE E+HF CG V RVTIL +
Sbjct: 113 DHRSIYVGNVDYGGSAEEQEAHFSCCGKVYRVTILTTR---------------------- 150
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVRRAR 207
LF +V PKRTN PGIS+T+RGG RG SRGA + RP R R
Sbjct: 151 ---SRPLF-----QVLPKRTNFPGISSTDRGGLRGHPG---SRGAP-FPHSRPRFRPR 196
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 78 LLNLSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK 133
L L +EK E D RSI+V ++ TAE LE+HF G +NR+TIL NK G PK
Sbjct: 65 FLQLGKDEKHAKQVELDTRSIFVSSITPETTAETLETHFKDVGMINRITILHNKRTGEPK 124
Query: 134 GFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
G+AYIEF +SV A+ ++ S F + I V KRTN PG
Sbjct: 125 GYAYIEFEMVESVAKALELNGSEFNNKIITVAKKRTNLPGF 165
>gi|260951495|ref|XP_002620044.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
gi|238847616|gb|EEQ37080.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
Length = 219
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 21/188 (11%)
Query: 23 NGDMEA-DQSKCTDEAELA---AMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNL 78
NG ++A DQ + ++ + ++++ E+E EA L+ + S++D SN+
Sbjct: 36 NGSVQALDQQASSAHNQIGNEMSFESQLTELEREAAMLRDISSQLDDI--------SNST 87
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
+N + D RS+Y+GN+ TA EL F V RVTIL +K G P G+AY+
Sbjct: 88 MNKV--STSDVDSRSVYIGNLHRDVTALELALRFSSNEDVVRVTILSDKTTGLPNGYAYL 145
Query: 139 EFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 197
EF+ + AMA MD + RGR++KV KRTN G + RG GR+ RG
Sbjct: 146 EFSSVEGASQAMARMDGTPLRGRKLKVRWKRTNIFGYNILRRG-----RNGRLVRGVG-R 199
Query: 198 GGYRPVRR 205
GYR R
Sbjct: 200 SGYRSFGR 207
>gi|256274155|gb|EEU09065.1| Sgn1p [Saccharomyces cerevisiae JAY291]
gi|259147260|emb|CAY80513.1| Sgn1p [Saccharomyces cerevisiae EC1118]
gi|323348162|gb|EGA82416.1| Sgn1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 250
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 81 LSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
LS EEK EAD RSI+VGN+ T E++E HF CG + R+T+L ++ G PKG+
Sbjct: 49 LSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYG 108
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
YIEF + A+ ++ +G++I V+ KRTN PG +
Sbjct: 109 YIEFESPAYREKALQLNGGELKGKKIAVSRKRTNIPGFN 147
>gi|6322191|ref|NP_012266.1| Sgn1p [Saccharomyces cerevisiae S288c]
gi|731904|sp|P40561.1|SGN1_YEAST RecName: Full=RNA-binding protein SGN1
gi|557850|emb|CAA86203.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943159|gb|EDN61494.1| cytoplasmic RNA-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406222|gb|EDV09489.1| RNA-binding protein SGN1 [Saccharomyces cerevisiae RM11-1a]
gi|285812648|tpg|DAA08547.1| TPA: Sgn1p [Saccharomyces cerevisiae S288c]
gi|346228212|gb|AEO21089.1| SGN1 [synthetic construct]
gi|349578952|dbj|GAA24116.1| K7_Sgn1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298723|gb|EIW09819.1| Sgn1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 81 LSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
LS EEK EAD RSI+VGN+ T E++E HF CG + R+T+L ++ G PKG+
Sbjct: 49 LSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYG 108
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
YIEF + A+ ++ +G++I V+ KRTN PG +
Sbjct: 109 YIEFESPAYREKALQLNGGELKGKKIAVSRKRTNIPGFN 147
>gi|323333070|gb|EGA74471.1| Sgn1p [Saccharomyces cerevisiae AWRI796]
Length = 250
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 81 LSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
LS EEK EAD RSI+VGN+ T E++E HF CG + R+T+L ++ G PKG+
Sbjct: 49 LSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYG 108
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
YIEF + A+ ++ +G++I V+ KRTN PG +
Sbjct: 109 YIEFESPAYREKALQLNGGELKGKKIAVSRKRTNIPGFN 147
>gi|254581722|ref|XP_002496846.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
gi|238939738|emb|CAR27913.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
Length = 289
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Query: 63 VDKQMSMGSPPNSNNLLNLSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSV 118
++ + + PP LS EEK EAD RSI+VGN+ T E +E HF CG +
Sbjct: 55 IEDNIELKGPPK------LSREEKYTLQVEADARSIFVGNISPDVTPEIIEEHFAECGEI 108
Query: 119 NRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
R+T+L +K G PKG+AY++F + + A+ ++ + +G +I V KRTN PG
Sbjct: 109 KRITLLHDKHTGVPKGYAYVQFESSEVQENALKLNGTELKGNKINVYKKRTNLPG 163
>gi|401842846|gb|EJT44882.1| SGN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 250
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 81 LSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
LS EEK EAD RSI+VGN+ T E++E HF CG + R+T+L ++ G PKG+
Sbjct: 49 LSKEEKHAHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYG 108
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
YIEF + A+ ++ G++I V+ KRTN PG +
Sbjct: 109 YIEFESPAFREKALQLNGVELNGKKIAVSRKRTNIPGFN 147
>gi|365760126|gb|EHN01868.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 250
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 81 LSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFA 136
LS EEK EAD RSI+VGN+ T E++E HF CG + R+T+L ++ G PKG+
Sbjct: 49 LSKEEKHAHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYG 108
Query: 137 YIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 175
YIEF + A+ ++ G++I V+ KRTN PG +
Sbjct: 109 YIEFESPAFREKALQLNGVELNGKKIAVSRKRTNIPGFN 147
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ +++E D RSIYVGNV+Y +T +LE F G+V RVTIL +++ G KGFAYIEF
Sbjct: 30 LPKQEEIDQRSIYVGNVEYLSTPGQLEEFFSAVGTVERVTILFDRYSGLSKGFAYIEFDT 89
Query: 143 KDSVQTAM-AMDESLFRGRQIKVNPKRTNRPGI 174
++ + A+ + F R+++++PKR N PG
Sbjct: 90 TEAAERAIEELHGKKFNERELRISPKRINLPGF 122
>gi|123417547|ref|XP_001305136.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886636|gb|EAX92206.1| hypothetical protein TVAG_107400 [Trichomonas vaginalis G3]
Length = 144
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E +K D SI+VGN+D T E+LE+HF CG + ++TI K + H +AYIEF K
Sbjct: 45 EVEKPKDENSIWVGNLDASVTQEKLENHFSCCGKIKKLTI-PTKQNPHAPKYAYIEFDSK 103
Query: 144 DSVQTAM-AMDESLFRGRQIKVNPKRTNRPGISTTNR 179
++ Q A+ +++ LF GR + + PKR NRPG+ + R
Sbjct: 104 EAAQLAIDSLNNHLFSGRNLNIKPKRENRPGMRRSFR 140
>gi|410084060|ref|XP_003959607.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
gi|372466199|emb|CCF60472.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
Length = 141
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
+++AD +SI+V N+ T E +E HF CGS+ R+TILCNK G+AYIEF ++
Sbjct: 41 QRDADSKSIFVRNIHSDTTPEIIEEHFKECGSIKRITILCNKSTNKFNGYAYIEFDSREK 100
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 180
+ A+ +D + G +I V KRTNRP + ++G
Sbjct: 101 REQALLLDNTELNGCKISVLRKRTNRPTSNIYDKG 135
>gi|313239216|emb|CBY14172.1| unnamed protein product [Oikopleura dioica]
Length = 584
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Query: 48 EMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEE 107
++ +EA+K+KQLQ + Q +P S +N S++ + D R+++V +D T E
Sbjct: 419 DLIDEAQKIKQLQKKTLPQEMSVTPIISTMDINASLDSS-DTDKRTVFVSGLDVITTEPE 477
Query: 108 LESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
L+ HF CG++ RVTIL ++F KG AYI+FA D QTA D + G+ I+V K
Sbjct: 478 LKEHFQVCGTIVRVTILRDRFTRMSKGCAYIQFATLDQRQTADVFDNTEIHGKTIRVTQK 537
>gi|308466761|ref|XP_003095632.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
gi|308244631|gb|EFO88583.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
Length = 160
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF----------AYIEFAD 142
++VGNVD+GAT ELE+HF GCG + R+TI +K K + A+IEF
Sbjct: 22 CVFVGNVDFGATVAELEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIEFEC 81
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 177
SV A+ M+ S FR RQI V KRTN+PG+ T
Sbjct: 82 AASVANAIVMNGSTFRERQIVVTLKRTNKPGMGAT 116
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 32 KCTDEAELAAMKARVREME--EEAEKLKQLQSEVDK-QMSMGSPPNSNNLLNLSIEEKKE 88
K E+EL ++ V+ ME E + Q ++ Q PP S N +E
Sbjct: 473 KFLQESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEE 532
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K+S +
Sbjct: 533 ADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAEN 592
Query: 149 AMAMDESLFRGRQIKV 164
A+++D + F R +KV
Sbjct: 593 ALSLDGTSFMSRILKV 608
>gi|255544232|ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
gi|223547676|gb|EEF49169.1| poly-A binding protein, putative [Ricinus communis]
Length = 514
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
++AD R+I+V NV + AT + L HF+ G V +V I+ + G P G AYIEF K++
Sbjct: 334 EDADSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVVIMADAATGQPMGSAYIEFMRKEAA 393
Query: 147 QTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR------GRVSRGA---AMY 197
A+++D + F R +KV KR+ +T N PRG R GR SRG +
Sbjct: 394 DNALSLDGTSFMSRILKVV-KRSPANQEATANMIWPRGGTRGSPYTAGRFSRGPFPRGIS 452
Query: 198 GGYRP 202
G +RP
Sbjct: 453 GAFRP 457
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+A R+I+V NV +GAT + L HF+ CG V + TI+ + G P G AYIEF K++ +
Sbjct: 502 DASSRTIFVANVHFGATKDSLSRHFNKCGEVLKATIVTDPATGQPSGSAYIEFTRKEAAE 561
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
A+++D + F R +K+ + + ++ PRG GR +R + + G
Sbjct: 562 NALSLDGTSFMSRILKIVKGSNGQQQEAASSMTWPRG---GRFARAPSYFRG 610
>gi|449501608|ref|XP_004161415.1| PREDICTED: uncharacterized protein LOC101228197 [Cucumis sativus]
Length = 709
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 32 KCTDEAELAAMKARVREME--EEAEKLKQLQSEVDK-QMSMGSPPNSNNLLNLSIEEKKE 88
K E+EL ++ V+ ME E + Q ++ Q PP S N +E
Sbjct: 473 KFLQESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEE 532
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
AD R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K+S +
Sbjct: 533 ADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAEN 592
Query: 149 AMAMDESLFRGRQIK 163
A+++D + F R +K
Sbjct: 593 ALSLDGTSFMSRILK 607
>gi|154341861|ref|XP_001566882.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064207|emb|CAM40405.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 214
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 3 DQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSE 62
D I E+ F N DM+A EAEL MK +V ++E+ + LK LQ
Sbjct: 7 DHRGEMISAEDQF-------NFDMDA-------EAELEEMKRQVDSLQEDMQ-LKALQES 51
Query: 63 VDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVT 122
K G+ + S + + SI+VG++D T +L F CG++ RVT
Sbjct: 52 AAK--DEGTRKTAAAAGGSSGQARTNT---SIFVGDLDLRTTDADLRVFFASCGAITRVT 106
Query: 123 ILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST-TNRGG 181
+L ++ G+PKG AY+EF + Q A+ D G+ ++V KR N P RGG
Sbjct: 107 VLKDR-QGNPKGTAYVEFETEAQAQAAVLKDGQSLHGKPLRVAMKRDNIPAFQRGLPRGG 165
Query: 182 ---PRGRGRG 188
PRGRG G
Sbjct: 166 AYIPRGRGAG 175
>gi|294460473|gb|ADE75814.1| unknown [Picea sitchensis]
Length = 485
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
+N S+ ++AD R+++V NV + AT E + HF CG V +V +L + G PKG AYI
Sbjct: 286 VNTSVR-PEDADSRTVFVSNVHFAATKEAITKHFSRCGEVVKVIMLTDVATGQPKGSAYI 344
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKV 164
EF+ +++ + A+ ++E+ F R +KV
Sbjct: 345 EFSCRETAEIALTLNETSFMSRMLKV 370
>gi|115477168|ref|NP_001062180.1| Os08g0504600 [Oryza sativa Japonica Group]
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113624149|dbj|BAF24094.1| Os08g0504600 [Oryza sativa Japonica Group]
Length = 684
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 17 NGDHIENGDMEADQS-KCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNS 75
N +++E + E + ++ ++ M A V + ++L + + D Q S + +
Sbjct: 454 NANNLEPSNYETPKDVHVVEKTDITPMNATVTSLTSNIKELAHGEVQKDSQRSAIASSVT 513
Query: 76 NNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGF 135
++ E +AD R++YV NV +GAT + L HF+ G+V +V I+ N G P G
Sbjct: 514 SSYSTAHPTE--DADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGS 571
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR-------PG---ISTTNRGG---- 181
AY+EF K+S + A++++ + F R +KV + ++ PG S R G
Sbjct: 572 AYVEFLHKESAERALSLNGTSFMARILKVVRRSSHEAAHFYGWPGGGRTSMYARHGRMAY 631
Query: 182 PRGRGRGRVSRG-AAMYGGYRPVRRAR 207
PRG G RG A M G R ++ R
Sbjct: 632 PRGGLPGSTFRGRAPMIAGARSLQWKR 658
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+A M + + ++L + + D Q S S P S + + +++ AD R++YV N
Sbjct: 486 VAPMNSNATSVATNTKELGHAEVQKDSQRSAPSVPVSYSTSHPTVD----ADSRTLYVSN 541
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
V + AT + L HF+ G+V +V I+ N G P G AY+EF K+S + A++++ + F
Sbjct: 542 VHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFM 601
Query: 159 GRQIKVNPKRTNR-------PGISTTNRGGPRGR 185
R +KV + ++ PGI ++ G GR
Sbjct: 602 TRILKVVRRSSHEAAHFYGWPGIGRSSLYGRHGR 635
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
N DM+A EAEL MK +V ++E+ + LK LQ K G+ + S
Sbjct: 20 NVDMDA-------EAELEEMKRQVESLQEDMQ-LKALQESAAK--DEGTRKTAAAAAASS 69
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ K SI+VG++D T +L F CG++ RVT+L ++ G+PKG AY+EF
Sbjct: 70 GQTKTNT---SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFET 125
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST-TNRGGP---RGRGRG 188
+ A+ D G+ +KV KR N P +RGG RGRG G
Sbjct: 126 EGQAHAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISRGGAYALRGRGAG 175
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
N DM+A EAEL MK +V ++E+ + LK LQ K G+ + S
Sbjct: 20 NVDMDA-------EAELEEMKRQVESLQEDMQ-LKALQESAAK--DEGTRKTAAAAAASS 69
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ K SI+VG++D T +L F CG++ RVT+L ++ G+PKG AY+EF
Sbjct: 70 GQTKTNT---SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFET 125
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST-TNRGGP---RGRGRG 188
+ A+ D G+ +KV KR N P +RGG RGRG G
Sbjct: 126 EGQAHAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISRGGAYALRGRGAG 175
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+A M + + A++L + + D Q S S P S + + ++AD R++YV N
Sbjct: 487 VAPMNSNAASIATNAKELGHAEVQKDSQRSAPSVPVSYS----TAHPMEDADSRTLYVNN 542
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
V + AT + L HF+ G+V +V I+ N G P G AY+EF K+S + A++++ + F
Sbjct: 543 VHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFM 602
Query: 159 GRQIKV 164
R +KV
Sbjct: 603 TRILKV 608
>gi|50290735|ref|XP_447800.1| hypothetical protein [Candida glabrata CBS 138]
gi|38603385|dbj|BAD02472.1| hypothetical protein [Candida glabrata]
gi|49527111|emb|CAG60749.1| unnamed protein product [Candida glabrata]
Length = 144
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EAD SIY+GN+ T EE++ HF CG + R+T+L +K G G+AY+EF DS
Sbjct: 41 EADACSIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVEFDSIDSRD 100
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPG 173
A+ + + R I V KRTN P
Sbjct: 101 KALDFNGTNLRQHVISVERKRTNIPN 126
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 3 DQENSFIHEEENFENGDHIENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSE 62
D + I E+ F N DM+A EAEL MK +V ++E+ + LK LQ
Sbjct: 7 DHGSEMISAEDQF-------NVDMDA-------EAELEEMKRQVDSLQEDMQ-LKALQES 51
Query: 63 VDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVT 122
K G+ + S + K SI+VG++D T +L F CG++ RVT
Sbjct: 52 AAK--DEGTRKTAAAAAASSGQTKTNT---SIFVGDLDLRTTDADLRVFFASCGAITRVT 106
Query: 123 ILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGIST-TNRGG 181
+L ++ G+PKG AY+EF + A+ D G+ +KV KR N P +RGG
Sbjct: 107 VLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISRGG 165
Query: 182 P---RGRGRG 188
RGRG G
Sbjct: 166 AYALRGRGAG 175
>gi|168017441|ref|XP_001761256.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687596|gb|EDQ73978.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 731
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 25/163 (15%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
+G + D ++ MK ++R+++ + KL+ Q+EV K++ SP + L +S
Sbjct: 428 DGKVIGDAQTTIVNEDVLEMKKKLRQIQLDMTKLRARQAEVTKEV-QNSP--AAGLRTMS 484
Query: 83 IEEK---KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG----- 134
E + ++ + RSI+V NV + AT L +HF GCG +NRVT+L G PKG
Sbjct: 485 FESQPSQEDINSRSIFVTNVHFAATQAALRAHFGGCGIINRVTLLAEPATGKPKGDLKGC 544
Query: 135 --------------FAYIEFADKDSVQTAMAMDESLFRGRQIK 163
A++EFA KD+V+ A+ + ES R +K
Sbjct: 545 PNLHDAKTSLHVDRSAFVEFATKDAVEIALTLSESSLLSRNVK 587
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
EAEL MK +V ++E+ + LK LQ K G+ + S + K SI+
Sbjct: 26 EAELEEMKRQVDSLQEDMQ-LKALQESAAK--DEGTRKTAAAAAATSGQSKTNT---SIF 79
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VG++D T +L F CG++ RVT+L ++ G+PKG AY+EF + A+ D
Sbjct: 80 VGDLDLRTTDADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQ 138
Query: 156 LFRGRQIKVNPKRTNRPGIS-TTNRGGP---RGRGRG 188
G+ +KV KR N P +RGG RGRG G
Sbjct: 139 SLHGKPLKVAMKRDNIPAFQRGISRGGAYALRGRGAG 175
>gi|67983365|ref|XP_669046.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482726|emb|CAI00762.1| hypothetical protein PB300015.00.0 [Plasmodium berghei]
Length = 61
Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 107 ELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
EL S F CG +N TIL NK GH KG+AYIEFAD SV+TA+++ +S F+ RQIKV
Sbjct: 1 ELHSLFSQCGIINTFTILVNKNTGHSKGYAYIEFADPSSVRTAISLSKSFFKKRQIKV 58
>gi|218201413|gb|EEC83840.1| hypothetical protein OsI_29794 [Oryza sativa Indica Group]
gi|222640831|gb|EEE68963.1| hypothetical protein OsJ_27861 [Oryza sativa Japonica Group]
Length = 725
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+AD R++YV NV +GAT + L HF+ G+V +V I+ N G P G AY+EF K+S +
Sbjct: 565 DADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAE 624
Query: 148 TAMAMDESLFRGRQIKVNPKRTNR-------PG---ISTTNRGG----PRGRGRGRVSRG 193
A++++ + F R +KV + ++ PG S R G PRG G RG
Sbjct: 625 RALSLNGTSFMARILKVVRRSSHEAAHFYGWPGGGRTSMYARHGRMAYPRGGLPGSTFRG 684
Query: 194 -AAMYGGYRPVRRAR 207
A M G R ++ R
Sbjct: 685 RAPMIAGARSLQWKR 699
>gi|343471000|emb|CCD16472.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 212
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
+GD ++ EAELA M+ +V +++E+ +LK LQ + G ++ N +
Sbjct: 7 DGDNALFNTEVDPEAELAEMQRQVNDLQEDL-RLKALQETAAQ--DEGQRKSTGNTFS-- 61
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
K A S++VG +D T +L F GCG++ R+T+L +KF G KG AYIEF
Sbjct: 62 ----KNA---SVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDT 114
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAA 195
+ +A+ + G+ + V KR N P RGG G RG G A
Sbjct: 115 VEQATSAIVKNGQSLHGKPLTVAVKRDNVPAFQ-RGRGGAPGFPRGGYRGGGA 166
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 70 GSPPNSNNLLNLSIEEKK----EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILC 125
G+P S L S EEK EAD RSI+VGN+ T E++E HF CG + R+T+L
Sbjct: 41 GTPQVSQKL---SKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLY 97
Query: 126 NKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
++ G PKG+ YIEF + A+ ++ +G++I K+
Sbjct: 98 DRNTGTPKGYGYIEFESPAYXEKALQLNGGELKGKKISCLQKK 140
>gi|342181601|emb|CCC91081.1| putative RNA-binding protein RBP14 [Trypanosoma congolense IL3000]
Length = 274
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 23 NGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLS 82
+GD ++ EAELA M+ +V +++E+ +LK LQ + G ++ N +
Sbjct: 69 DGDNALFNTEVDPEAELAEMQRQVNDLQEDL-RLKALQETAAQ--DEGQRKSTGNTFS-- 123
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
K A S++VG +D T +L F GCG++ R+T+L +KF G KG AYIEF
Sbjct: 124 ----KNA---SVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDT 176
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAA 195
+ +A+ + G+ + V KR N P RGG G RG G A
Sbjct: 177 VEQATSAIVKNGQSLHGKPLTVAVKRDNIPAFQ-RGRGGAPGFPRGGYRGGGA 228
>gi|242082291|ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
gi|241942264|gb|EES15409.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
Length = 694
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 39 LAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGN 98
+ M + + A+++ +++ D Q S S P S + + + ++AD R++YV N
Sbjct: 486 VTPMNSNATTLATNAKEVGHAEAQKDSQRSAPSVPVSYSTAHPT----EDADSRTLYVSN 541
Query: 99 VDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFR 158
V + AT + L HF+ G+V +V I+ N G P G AY+EF K+S + A++++ + F
Sbjct: 542 VHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFM 601
Query: 159 GRQIKV 164
R +KV
Sbjct: 602 TRILKV 607
>gi|294924689|ref|XP_002778856.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
gi|239887665|gb|EER10651.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
Length = 94
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
+ +K+ GHPKGFAYIEF D+ +VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 1 MVDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 50
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+AD R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K++ +
Sbjct: 520 DADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAAE 579
Query: 148 TAMAMDESLFRGRQIKVNPKRTNR----PGISTTN--RGGPRGRGR-GRVSRGAAMYGGY 200
A+++D + F R +KV + + PG+S RG P R RV + G +
Sbjct: 580 HALSLDGTSFMSRILKVVKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIPGAF 639
Query: 201 R---PVR 204
R PV+
Sbjct: 640 RARLPVK 646
>gi|255711272|ref|XP_002551919.1| KLTH0B02992p [Lachancea thermotolerans]
gi|238933297|emb|CAR21481.1| KLTH0B02992p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGS-VNRVTILCNKFDGHPKGFAYIEFADKDS 145
+ AD RS+YVGN+D AE L+ F G S VNRV I NK G KGFA++EFA
Sbjct: 65 QSADARSVYVGNLDPSINAETLQEFFKGSVSRVNRVEIQINKLTGFAKGFAFVEFAQPRD 124
Query: 146 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS--TTNRGGPRGR 185
V A+ + + G+ +K+ PK RP + NRG R R
Sbjct: 125 VMDAIKLSNTKLGGKPLKIVPK---RPSFHQESPNRGSHRMR 163
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+AD R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K++ +
Sbjct: 526 DADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAAE 585
Query: 148 TAMAMDESLFRGRQIKVNPKRTNR----PGISTTN--RGGPRGRGR-GRVSRGAAMYGGY 200
A+++D + F R +KV + + PG+S RG P R RV + G +
Sbjct: 586 HALSLDGTSFMSRILKVVKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIPGAF 645
Query: 201 R---PVR 204
R PV+
Sbjct: 646 RARLPVK 652
>gi|444313531|ref|XP_004177423.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
gi|387510462|emb|CCH57904.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
Length = 145
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 76 NNLLNLS----IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
N+L++L+ E + EAD SI++GN+D T + +E HF G + R+T+ + H
Sbjct: 17 NSLISLNKISNFETQAEADKCSIFIGNIDPSVTPDVIEEHFKVSGQIKRITLFGDGHASH 76
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
KG+AY+EF + A+ ++ S+ ++I V KRTN P
Sbjct: 77 SKGYAYVEFISPSGQENALKLNGSVLNNKRIIVQKKRTNLP 117
>gi|302823293|ref|XP_002993300.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
gi|300138873|gb|EFJ05625.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
Length = 773
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSE---VDKQMSMGSPPNSNN----------- 77
K D ++ MK R+R++E E KL+ Q E V ++ S PP +
Sbjct: 477 KGQDLQDVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTS 536
Query: 78 -----LLNLSIEEKK--EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
L + + + D + I V NV + T E + +HF CG V +VT+L + G
Sbjct: 537 MQTAPLTSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSG 596
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
PKG AY+EF+ KD+ A++++ES R I+V K N
Sbjct: 597 KPKGSAYVEFSSKDAADRALSLNESSLLSRPIRVARKDAN 636
>gi|255716954|ref|XP_002554758.1| KLTH0F13090p [Lachancea thermotolerans]
gi|238936141|emb|CAR24321.1| KLTH0F13090p [Lachancea thermotolerans CBS 6340]
Length = 145
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
I E+++ D RSI++ N+ + LE HF G++NRVTI N+ G+AYIEF +
Sbjct: 46 ISEQRKTDARSIFLRNIPVDISINLLEDHFKLYGTINRVTIFTNR-KTFNLGYAYIEFEE 104
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGI 174
S A+ ++ S G +I+V KRTN PGI
Sbjct: 105 DCSADQALDLNNSELCGHKIEVTKKRTNLPGI 136
>gi|302772723|ref|XP_002969779.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
gi|300162290|gb|EFJ28903.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
Length = 771
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 32 KCTDEAELAAMKARVREMEEEAEKLKQLQSE---VDKQMSMGSPPNSNN----------- 77
K D ++ MK R+R++E E KL+ Q E V ++ S PP +
Sbjct: 475 KGQDLQDVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTS 534
Query: 78 -----LLNLSIEEKK--EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
L + + + D + I V NV + T E + +HF CG V +VT+L + G
Sbjct: 535 MQTAPLTSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSG 594
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTN 170
PKG AY+EF+ KD+ A++++ES R I+V K N
Sbjct: 595 KPKGSAYVEFSSKDAADRALSLNESSLLSRPIRVARKDAN 634
>gi|296081813|emb|CBI20818.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 31 SKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEAD 90
S+ T ++ +K R ++E E KL+ +++ + G P+ ++ +++ +
Sbjct: 399 SEATFAQKMLDLKVRFHQLEREMCKLRSKHTDLKR----GGKPDLSSSSGTLRHPEEDIE 454
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
R++YV NV + AT E L +HF CG V V IL ++ PK A+I FA +SV A+
Sbjct: 455 PRTVYVTNVHFAATKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESVNKAL 514
Query: 151 AMDESLFRGRQIKV 164
A+ + F R +KV
Sbjct: 515 ALSGTSFFSRTVKV 528
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 40 AAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK----EADLRSIY 95
A +K + ++ ++ +L V K G+P S L S EEK EAD RSI+
Sbjct: 11 ATLKTEISNNKKNDKQELELDELVGKLSIEGTPQVSQKL---SKEEKHAHQLEADSRSIF 67
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGN+ T E++E HF CG + R+T+L ++ G PKG+ YIEF + A+ ++
Sbjct: 68 VGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGG 127
Query: 156 LFRGRQ 161
+G++
Sbjct: 128 ELKGKK 133
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 40 AAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK----EADLRSIY 95
A +K + ++ ++ +L V K G+P S L S EEK EAD RSI+
Sbjct: 11 ATLKTEISNNKKNDKQELELDELVGKLSIEGTPQVSQKL---SKEEKHAHQLEADSRSIF 67
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VGN+ T E++E HF CG + R+T+L ++ G PKG+ YIEF + A+ ++
Sbjct: 68 VGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGG 127
Query: 156 LFRGRQ 161
+G++
Sbjct: 128 ELKGKK 133
>gi|145528476|ref|XP_001450032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417632|emb|CAK82635.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
K+ DL SI+V N+D T ++L+ +F CG++ +VT+ +K G ++YI+F D+ SV
Sbjct: 35 KDIDLTSIFVRNLDENTTEDDLKEYFKDCGNIVKVTLRSDKNTGTL--YSYIQFQDQSSV 92
Query: 147 QTAMAMDESLFRGRQIKVNPKRTN 170
+ A+ + E + RG++I V KRTN
Sbjct: 93 EDALVLSEGIIRGKKILVFQKRTN 116
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 64 DKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTI 123
D Q PP+S + L ++AD R+I+V NV + AT + L HF+ G V +V +
Sbjct: 482 DIQQEPQKPPSSASGRPL-----EDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVL 536
Query: 124 LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+ + G P G AY+EF K++ A+++D + F R +KV + S++N+
Sbjct: 537 VTDAATGQPTGSAYVEFMRKEAADNALSLDGTSFMSRIVKVMKR-------SSSNQEASP 589
Query: 184 GRGRGRVSRGAAMYGG 199
R+SRG++ G
Sbjct: 590 VMTWPRISRGSSYAAG 605
>gi|452845187|gb|EME47120.1| hypothetical protein DOTSEDRAFT_145507 [Dothistroma septosporum
NZE10]
Length = 571
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+DY T+ ++E GC SV V I+ +K D PKGF Y+EFA+ + + A++
Sbjct: 106 TAHLGNLDYNVTSVDIEGFLEGC-SVTTVRIMEDKIDRKPKGFGYVEFANPEGLTKALSK 164
Query: 153 DESLFRGRQIKV---NPKRTNR 171
ES F GR IK+ +P + +R
Sbjct: 165 SESSFMGRNIKISVADPPKNDR 186
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ S+YVGN + T EEL + F G +N V I+C++ G P+GFA+IEFA++ S Q A+
Sbjct: 4 IFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Query: 151 -AMDESLFRGRQIKVN 165
M+ + F GR ++VN
Sbjct: 64 EQMNGAEFNGRPLRVN 79
>gi|297821731|ref|XP_002878748.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324587|gb|EFH55007.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
+E+ +K +++E+E + KQL+ + +++ SP + + + E R I+V
Sbjct: 393 SEIKNVKEKMQELELRIIQSKQLKKQKIEELK-PSPQSGESQYQQDVTES-----RIIHV 446
Query: 97 GNVDYGATAEELESHFHG-CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
NV+Y A E + F CG+V VTI+ + HPKG A++ FA K+SV A+A+ +
Sbjct: 447 TNVNYAAKKEAISMFFSSKCGAVENVTIVTDPVTRHPKGSAFVTFATKESVNQAIALSGT 506
Query: 156 LFRGRQIKV 164
+F R IKV
Sbjct: 507 MFYSRPIKV 515
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIY+GN+ Y T E+L+ F G VNRV + ++ G P+GFA++E + +D A+ A
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEA 61
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGR 185
+D + + GR +KVN P+ RP +RGG R R
Sbjct: 62 LDGAEWMGRDLKVNKAKPREDRRP----ASRGGGRSR 94
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R+++V NV + AT + L HF+ G+V + I+ + G P G AYIEF K+S + A
Sbjct: 510 DSRTVFVNNVHFAATKDALSRHFNKFGAVLKTLIVTDGVTGQPTGSAYIEFLQKESAEQA 569
Query: 150 MAMDESLFRGRQIKVNPKRT----NRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
+ ++ + F R +KV + + PG S +RG P R + M+ G
Sbjct: 570 LTLNGTSFMSRILKVVRRSSVEVPQLPGWSRASRGSPFASRLIRTAYPRPMFPG 623
>gi|167392444|ref|XP_001740157.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165895835|gb|EDR23424.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 135
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E +KE D RSI+V NV+Y T ++LE F CG + V I N F P G+A IEF +
Sbjct: 31 EIEKELDSRSIHVSNVEYSTTKDDLEDLFEKCGIILNVNIPINYFTQTPMGYANIEFKNS 90
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRT 169
++++ A+ + + GR I+V+ K T
Sbjct: 91 NAIEKALKLSGTYLNGRYIEVSKKIT 116
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
++VGN+ + + EEL SHF CG + + I+ +K G KGF Y+ F + D V + +
Sbjct: 206 LFVGNLPFSLSDEELRSHFKDCGWIEDIRIIRDKATGLGKGFGYVRFKNSDGVMLGLKLH 265
Query: 154 ESLFRGRQIKV-------NPKRTNRP---GISTTNR 179
ES F+GR+++V KR ++P G+ TT++
Sbjct: 266 ESDFKGRKLRVFRSRNENQEKRKSKPSFRGVRTTSK 301
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+ D R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K++
Sbjct: 317 DVDSRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAATGQPKGAAYVEFMRKEAAD 376
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA 194
A+++D + F R +KV K +TT P R+ RG+
Sbjct: 377 NALSLDNTSFMSRILKVIKKS------ATTQESAP-AMAWPRIVRGS 416
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VGN+ + T E L HF CG ++ V I+ ++ +G KGF Y+ F DSV+ A+ +D
Sbjct: 251 IFVGNLTFDVTDEALWLHFGECGKISDVRIIRDRVNGMGKGFGYVNFESADSVELALKLD 310
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVR 204
+SL R I+V+ + N T + + R G+ S G Y+ ++
Sbjct: 311 QSLLNDRPIRVSRCKKNPKPFKTEEKKPGKEREDGKES------GAYKRIK 355
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 280 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 339
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 340 LKLNNSELMGRKLRV 354
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 280 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 339
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 340 LKLNNSELMGRKLRV 354
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+ D R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K++
Sbjct: 302 DVDSRTIFVSNVHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAAD 361
Query: 148 TAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
A+++D + F R +KV K++ P S PR
Sbjct: 362 NALSLDNTSFMSRILKVI-KKSATPQESAPAMAWPR 396
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 1355 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 1414
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 1415 LKLNNSELMGRKLRV 1429
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 15/122 (12%)
Query: 58 QLQSEVDKQMSMGS---------------PPNSNNLLNLSIEEKKEADLRSIYVGNVDYG 102
+L EV K +S+G+ PP+S + + ++AD R+I+V NV +
Sbjct: 497 KLMKEVSKPVSVGNGNAKPAGGIQQEPQKPPSSASGPYTAGCPLEDADSRTIFVSNVHFA 556
Query: 103 ATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQI 162
AT + L HF+ G V +V I+ + G P G AY+EF K++ A+++D + F R +
Sbjct: 557 ATKDSLSRHFNKFGEVLKVVIVTDAATGQPTGSAYVEFMHKEAADNALSLDGTSFMSRIL 616
Query: 163 KV 164
KV
Sbjct: 617 KV 618
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
++N +I + +E + +IYVGN+ Y T E+L + F G V+ ++ +KF KGF +
Sbjct: 4 MINGTIFDLQEHFIVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGF 63
Query: 138 IEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 188
+E A K+ +TA+ M +S +GRQI VN RP + N G R G G
Sbjct: 64 VEMASKEDAETAIKEMHDSDIKGRQIVVNEA---RPRNESNNGGFRRNDGFG 112
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 70 GSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD 129
GSP N+ S EK++ R+IYVGNV+ T+E+L F CG + + + +
Sbjct: 159 GSPANAQ-----SYHEKQDEIARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGD--E 211
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
HP FA+IEFA K++ Q AM ++ ++ R +KVN
Sbjct: 212 SHPSRFAFIEFATKEAAQAAMMLNGTMLLDRAVKVN 247
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGSV V I+ ++ G KGF Y+ F + DSV A
Sbjct: 1672 DKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 1731
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG 193
+ ++ S GR+++V + N+ + N PR + G+ +G
Sbjct: 1732 LKLNNSELMGRKLRVM-RSVNKEKLKQQN-SNPRLKNIGKPKQG 1773
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ SI+V +D+ T E+L+S F G VNRVTI ++ G P+GFA++E AD+ A+
Sbjct: 1 MTSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAI 60
Query: 151 -AMDESLFRGRQIKVNPKRTNRPGISTT---NRGGPRGRGRGRVSRG 193
A+D+S GR I V G + NR G R R R RG
Sbjct: 61 EALDDSSVNGRNIAVKKADDRASGGKPSGDNNRSGDRPAFRPREDRG 107
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 314 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 373
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 374 LKLNNSELMGRKLRV 388
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+ D R+I+V NV + AT + L HF+ G V +V I+ + G PKG AY+EF K++
Sbjct: 507 DVDSRTIFVSNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAAYVEFMLKEAAD 566
Query: 148 TAMAMDESLFRGRQIKV 164
A+++D + F R +KV
Sbjct: 567 NALSLDGTSFMSRILKV 583
>gi|340054247|emb|CCC48543.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 213
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIY 95
EAEL M+ +V +++E+ +LK LQ S+ + N SI+
Sbjct: 20 EAELQEMQRQVNDLQEDL-RLKTLQETAAHDEGQRKGTGSSTIKN-----------TSIF 67
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VG +D T +L F GCG++ R+T+L +KF G KG +YIEF + A+ +
Sbjct: 68 VGGLDPRTTESDLRVFFSGCGAIKRLTMLRDKFTGQLKGTSYIEFETVEQANIALVKNGQ 127
Query: 156 LFRGRQIKVNPKRTNRP 172
GR + V KR N P
Sbjct: 128 SLHGRPLVVAVKRDNVP 144
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGSV V I+ ++ G KGF Y+ F + DSV A
Sbjct: 285 DKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 344
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRG 193
+ ++ S GR+++V + N+ + N PR + G+ +G
Sbjct: 345 LKLNNSELMGRKLRVM-RSVNKEKLKQQN-SNPRLKNIGKPKQG 386
>gi|145495181|ref|XP_001433584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400702|emb|CAK66187.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
K+ DL SI+V N+D T ++L+ +F CG++ +VT+ +K G ++Y++F ++ SV
Sbjct: 35 KDIDLSSIFVRNLDENTTEDDLKEYFKDCGTIVKVTLRSDKNTGTL--YSYVQFQEQGSV 92
Query: 147 QTAMAMDESLFRGRQIKVNPKRTN 170
+ A+ + E + RG++I V KRTN
Sbjct: 93 EDALVLSEGIIRGKKILVFQKRTN 116
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 314 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 373
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 374 LKLNNSELMGRKLRV 388
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSILAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|384494771|gb|EIE85262.1| hypothetical protein RO3G_09972 [Rhizopus delemar RA 99-880]
Length = 218
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 87 KEADLRSI-YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
+++D+R I ++GN+ + T EEL+ HF ++ + +L +K G PKGFA++EF +
Sbjct: 89 QQSDVRYIVFIGNLPFTTTKEELQKHFSTVENIKSLRLLTDKATGKPKGFAFMEFTNSKD 148
Query: 146 VQTAMAMDESLFRGRQIKV 164
+ A++ + F+ RQI V
Sbjct: 149 LNKALSFHHTFFKRRQINV 167
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ +K G KGF Y+ F + DSV A
Sbjct: 1670 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 1729
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 1730 LKLNNSELMGRKLRV 1744
>gi|440302481|gb|ELP94788.1| RNA-binding protein SGN1, putative [Entamoeba invadens IP1]
Length = 191
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
I+ +KE D RSI V N+DY T E+LE F G V VTI +K G PK +AYIE
Sbjct: 54 IDLQKERDNRSICVRNLDYSITKEQLEQLFSTVGDVKTVTIPVDKA-GKPKAYAYIELDS 112
Query: 143 KDSVQTAM-AMDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
+S + A+ ++ S R+I V KRTN+ G++ + G
Sbjct: 113 VESRERAVTSLTGSKLNDREITVEKKRTNKMGLAKKSNSG 152
>gi|407416749|gb|EKF37788.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 212
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDK----QMSMGSPPNSNNLLNLSIEEKKEADL 91
EAEL M+ +V +++E+ +LK LQ + + S GS N
Sbjct: 21 EAELQEMQRQVSDLQEDL-RLKTLQETAAQDEGHRKSTGSVATKNT-------------- 65
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
SI+VG +D T EL F CG++ R+T+L +KF G KG AYIEF + +
Sbjct: 66 -SIFVGGMDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGIL 124
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D G+ + V KR N P RGRG
Sbjct: 125 KDGQSLHGKPLNVAMKRDNIPAFQ-------RGRG 152
>gi|171685940|ref|XP_001907911.1| hypothetical protein [Podospora anserina S mat+]
gi|170942931|emb|CAP68584.1| unnamed protein product [Podospora anserina S mat+]
Length = 543
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + FH C VN V I+ ++ PKGFAY EFAD + ++TA+
Sbjct: 80 TAHLGNLSYDATVESVTDFFHDCNCVN-VRIIEDREQNRPKGFAYAEFADLEGLKTALTR 138
Query: 153 DESLFRGRQIKV 164
D F GR I++
Sbjct: 139 DGQSFEGRNIRI 150
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
+ N ++ E +E + +IYVGN+ Y T E+L + F G V+ ++ +KF KGF +
Sbjct: 4 MTNGTVFEFQEYFIVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGF 63
Query: 138 IEFADKDSVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+E A K+ + A+ M +S +GRQ+ VN RP ++N GG R
Sbjct: 64 VEMASKEDAEAAIKEMHDSDIKGRQVVVNEA---RPRNESSNNGGFR 107
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y T EEL + F G V+ ++ +KF KGF ++E A ++ +TA+
Sbjct: 2 NIYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKE 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR 185
M++S +GRQI VN R G + G R R
Sbjct: 62 MNDSDLKGRQIVVNQARPRNEGFRRSEGFGDRQR 95
>gi|357514871|ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355521746|gb|AET02200.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 815
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+AD R+I+ NV + AT + + HF+ G V + I+ + G PKG AY+EF K++
Sbjct: 634 DADSRTIFASNVHFAATKDAICRHFNKFGEVLKAVIVTDSITGKPKGAAYVEFMYKEAAD 693
Query: 148 TAMAMDESLFRGRQIKVNPKRTNR-----PGISTTN--RGGPRGRGRG-RVSRGAAMYGG 199
A+++D + F R +KV K T + P + + RG P R + A G
Sbjct: 694 NALSLDGTSFMSRILKVVRKSTAQQEDYAPAVPWPSGVRGSPYPSARFLKAPIPAGTAGA 753
Query: 200 YRP 202
+RP
Sbjct: 754 FRP 756
>gi|344342838|ref|ZP_08773708.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343805390|gb|EGV23286.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T EEL++ F G ++ V ++ +KF G KGF ++E + TA+ A
Sbjct: 2 NIYVGNLAYGVTQEELQAVFAAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADTAIKA 61
Query: 152 MDESLFRGRQIKVN 165
++++ +GR +KVN
Sbjct: 62 LNDTPLKGRNMKVN 75
>gi|428183384|gb|EKX52242.1| hypothetical protein GUITHDRAFT_102145 [Guillardia theta CCMP2712]
Length = 533
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 60 QSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
QSEV K S P+ + L +EK+ +++G + + TA++++ HF C +
Sbjct: 329 QSEVCKDKKEASEPSRD----LPAKEKEGFVKHILFLGQLPFDVTADDIKQHFASCAPHD 384
Query: 120 RVTI--LCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
+++I L ++ G P+G A++EF D + + A+++D S+ RGR+I+V
Sbjct: 385 QMSIRVLTDRVTGKPRGIAFLEFKDSTAAEAALSLDHSIMRGRRIRV 431
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query: 55 KLKQLQSEV---DKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESH 111
+L +L++++ D Q+ + + N + L+L + L ++ VGN Y T +EL +
Sbjct: 222 QLFELETDILVLDLQLWLKNLNNMSESLHLVLT------LLNVSVGNAAYQTTEQELGDY 275
Query: 112 FHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQIKVN 165
F G V V I+C++ G P+GFA++EFAD+ S Q A ++ + F GRQ++VN
Sbjct: 276 FSSVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQLNGADFNGRQLRVN 330
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+A R+I+V NV +GAT + L HF+ G V + I+ + G P G AYIEF K++ +
Sbjct: 476 DASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAE 535
Query: 148 TAMAMDESLFRGRQIKV 164
A+++D + F R +K+
Sbjct: 536 NALSLDGTSFMSRILKI 552
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+A R+I+V NV +GAT + L HF+ G V + I+ + G P G AYIEF K++ +
Sbjct: 500 DASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAE 559
Query: 148 TAMAMDESLFRGRQIKV 164
A+++D + F R +K+
Sbjct: 560 NALSLDGTSFMSRILKI 576
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+A R+I+V NV +GAT + L HF+ G V + I+ + G P G AYIEF K++ +
Sbjct: 512 DASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAE 571
Query: 148 TAMAMDESLFRGRQIKV 164
A+++D + F R +K+
Sbjct: 572 NALSLDGTSFMSRILKI 588
>gi|294882178|ref|XP_002769641.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873203|gb|EER02359.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 88
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 131 HPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
HPKGFAYIEF D+ +VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 2 HPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 44
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG++ V I+ ++ G KGF Y+ F +KDSV A
Sbjct: 284 DKRSVFVGNLPYKVEETAVEEHFLDCGNIVAVRIVRDQITGIGKGFGYVLFENKDSVHLA 343
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|398407175|ref|XP_003855053.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
gi|339474937|gb|EGP90029.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
Length = 566
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+DY T+ ++E C SV V I+ +K D PKGF Y+EF + ++ A+
Sbjct: 102 TAHLGNLDYNVTSVDIEEFLSDC-SVTTVRIMEDKVDRKPKGFGYVEFGSPEGLRQALTK 160
Query: 153 DESLFRGRQIKV---NPKRTNRP 172
ES F GR IK+ +P + +RP
Sbjct: 161 SESSFMGRNIKISVADPPKNDRP 183
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN Y T +EL +F G V V I+C++ G P+GFA++EFAD+ Q A
Sbjct: 7 SVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQ 66
Query: 152 MDESLFRGRQIKVN 165
++ F GRQ++VN
Sbjct: 67 LNGVDFNGRQLRVN 80
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+A R+I+V NV +GAT + L HF+ G V + I+ + G P G AYIEF K++ +
Sbjct: 158 DASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAE 217
Query: 148 TAMAMDESLFRGRQIKV 164
A+++D + F R +K+
Sbjct: 218 NALSLDGTSFMSRILKI 234
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y LE HF CGS+ V I+ N G +GF Y+ F + D+V A
Sbjct: 283 DKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 342
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 343 LKLNNSELMGRKLRV 357
>gi|238489901|ref|XP_002376188.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220698576|gb|EED54916.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 92
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 12/77 (15%)
Query: 33 CTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLR 92
DE E+AAMK RV EME EA KL+++Q+ +D+Q S NL E+K+E D R
Sbjct: 20 VDDEEEIAAMKRRVAEMESEAAKLREMQATLDQQ--------SENLR----EDKEEIDAR 67
Query: 93 SIYVGNVDYGATAEELE 109
SI+VGNVDYGA+ EE++
Sbjct: 68 SIFVGNVDYGASPEEIQ 84
>gi|384245524|gb|EIE19017.1| hypothetical protein COCSUDRAFT_67932 [Coccomyxa subellipsoidea
C-169]
Length = 596
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 30 QSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSP-------PNSNNLLNLS 82
Q K D LA MK ++ E++E+ L+ Q +M +P P + L
Sbjct: 377 QGKADD---LAQMKRKMLELQEQVRLLEAQQRTGALAGTMAAPGAIGAVGPAAAPLSLPP 433
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
+ D RS++V V A E + +HF GCG V VTI G +GFA++EF++
Sbjct: 434 V------DPRSVHVQGVSPLAVPEVIAAHFSGCGRVINVTI-GRDMQGMSRGFAHVEFSN 486
Query: 143 KDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
+ A+ + S+ + I V PK NRP S T GRGR G A + G
Sbjct: 487 ELEAHNALLLSGSILLQQPITVTPK-MNRPPPSLTPH-----YGRGRGGFGPAAFPG 537
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G KGF Y+ F + DSV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|336470007|gb|EGO58169.1| hypothetical protein NEUTE1DRAFT_82438 [Neurospora tetrasperma FGSC
2508]
gi|350290304|gb|EGZ71518.1| hypothetical protein NEUTE2DRAFT_88791 [Neurospora tetrasperma FGSC
2509]
Length = 562
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y ATAE + F GC VN V I+ ++ PKGFAY EF D + ++TA+
Sbjct: 82 TAHLGNLSYNATAESVTEFFEGCDVVN-VRIIEDRETQRPKGFAYAEFKDVEGLKTALTR 140
Query: 153 DESLFRGRQIKV 164
D F GR I++
Sbjct: 141 DGETFDGRSIRI 152
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S++VGN+ + T E L F CGS+ R + ++ G+P+GFAYI+F +DS + A +
Sbjct: 402 SVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKATKL 461
Query: 153 DESLFRGRQIKVN 165
+ GRQI+VN
Sbjct: 462 SGTDLEGRQIRVN 474
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+S++VGN+ + T E LE F CG + RV++ + G KGFA+++FAD+DS + A+
Sbjct: 294 KSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAVG 353
Query: 152 MDESLFRGRQIKVN---PKRTN 170
+ GR ++VN PK N
Sbjct: 354 KNGEDCEGRDLRVNYSFPKNDN 375
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 83 IEEKK-EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
IE+KK A+ +++VG +++ ATAEE+ +HF CG V+ V + + +GFA+I+F
Sbjct: 71 IEKKKFGAEGTTVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFT 130
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+ Q AMA+D + F GR I+V+ + + G ST GP+
Sbjct: 131 SAEGKQAAMALDGTEFMGRTIRVDDAQPAQ-GRSTDTNYGPK 171
>gi|85081737|ref|XP_956776.1| hypothetical protein NCU00457 [Neurospora crassa OR74A]
gi|28917853|gb|EAA27540.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 559
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y ATAE + F GC VN V I+ ++ PKGFAY EF D + ++TA+
Sbjct: 82 TAHLGNLSYNATAESVTEFFEGCDVVN-VRIIEDRETQRPKGFAYAEFKDVEGLKTALTR 140
Query: 153 DESLFRGRQIKV 164
D F GR I++
Sbjct: 141 DGETFDGRSIRI 152
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y LE HF CGS+ V IL N G +GF Y+ F + D+V A
Sbjct: 283 DKRSVFVGNLPYKVEEAALEEHFLDCGSIVAVRILRNPQTGVGRGFGYVLFENTDAVHLA 342
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 343 LKLNNSELMGRKLRV 357
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E +KE + RS++V NV+Y T EELE F CG V +V I N+F G+A IEF +
Sbjct: 31 EIEKELNSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEFKNS 90
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRT 169
++V+ A+ + + GR I+V+ K T
Sbjct: 91 NAVEKAIKLTGTNLNGRYIEVSKKIT 116
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN Y + +E+ S F G V V I+C++ G P+GFA++EFAD+ Q A+
Sbjct: 7 SVYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNE 66
Query: 152 MDESLFRGRQIKVN 165
++ + F GRQ++VN
Sbjct: 67 LNGADFNGRQLRVN 80
>gi|336268208|ref|XP_003348869.1| hypothetical protein SMAC_01892 [Sordaria macrospora k-hell]
gi|380094128|emb|CCC08345.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 584
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y ATAE + F GC VN V I+ ++ PKGFAY EF D + ++TA+
Sbjct: 104 TAHLGNLSYNATAETVTEFFEGCDVVN-VRIIEDRETQRPKGFAYAEFKDVEGLKTALTR 162
Query: 153 DESLFRGRQIKV 164
D F GR I++
Sbjct: 163 DGETFDGRSIRI 174
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 135
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E +KE D RS++V NV+Y T EELE F CG V +V I N+ G+A IEF +
Sbjct: 31 EIEKELDSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQLTQKTMGYANIEFKNS 90
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRT 169
++V+ A+ + + GR I+V+ K T
Sbjct: 91 NAVEKAIKLTGTNLNGRYIEVSKKIT 116
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++SIYVGN+ + A+ +EL F G+V+ V ++ ++ G P+GF ++ +D D+
Sbjct: 1 MKSIYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDTDAASAIE 60
Query: 151 AMDESLFRGRQIKVN--PKRTNRPGISTTNRGGPR 183
A+D F GR ++VN +R RP GGPR
Sbjct: 61 ALDGKDFGGRNLRVNEAQERKERPS------GGPR 89
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGSV V I+ + G +GF Y+ F + D+V A
Sbjct: 281 DKRSVFVGNLPYKVEESAVEKHFLDCGSVVAVRIVRDPVTGVGRGFGYVLFENTDAVHLA 340
Query: 150 MAMDESLFRGRQIKV-------NPKRTNRPGISTTNR 179
+ ++ S GR+++V K+ + PG+ N+
Sbjct: 341 LKLNNSELMGRKLRVMRSIHKEKLKQNSNPGLKNVNK 377
>gi|406866939|gb|EKD19978.1| translation initiation factor eIF4B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 575
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 22/136 (16%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++++GN+ + AT ++ F GC N V I+ +K + PKGF Y EFA +D ++ A+ +
Sbjct: 78 TVHLGNLSFEATVGDVTDFFAGCECTN-VRIIEDKMEMKPKGFGYAEFASRDGLKQALTL 136
Query: 153 DESLFRGRQIKVN----PK-RTNRP---GISTTNRGGP------RGRGRGRVSRG----- 193
+ S F+GR I+++ PK R +RP I+ +R GP RG RG RG
Sbjct: 137 NGSSFQGRNIRISVADPPKDRGDRPEAREITDWSRKGPLPDLPGRGNDRGGDRRGPERGV 196
Query: 194 --AAMYGGYRPVRRAR 207
A +GG R RR R
Sbjct: 197 GFGADFGGDRGERRER 212
>gi|156840954|ref|XP_001643854.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114481|gb|EDO15996.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 119
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPK-GFAYIEFADK 143
++K++D +SI+V N+ T E ++ F CG + R+TIL +K K G AY+EF
Sbjct: 16 KRKDSDQKSIFVSNISLEITPEVIDELFRNCGDIQRITILYDKNTHSNKGGHAYVEFDSV 75
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 178
S + A+ ++ + GR++ + PKRTN P N
Sbjct: 76 RSKENALELNGIIHEGRKLIIRPKRTNIPRFQRVN 110
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T +EL F G ++ V+++ +KF G KGF ++E + A+ A
Sbjct: 2 NIYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIKA 61
Query: 152 MDESLFRGRQIKVNPKR 168
++E+ +GR I+VN R
Sbjct: 62 LNETPLKGRNIRVNEAR 78
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y ++ HF CG V V I+ + G KGF Y+ FA+ D+VQ A
Sbjct: 273 DKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLA 332
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 333 LKLNNSELMGRKLRV 347
>gi|326520627|dbj|BAK07572.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R+++V NV +GAT + L HF+ G+V + I+ + G P G AYIEF +K+S + A
Sbjct: 322 DSRTVFVSNVHFGATKDGLSCHFNKFGAVLKTLIVSDGATGQPTGSAYIEFLEKESAEKA 381
Query: 150 MAMDESLFRGRQIKV 164
+ ++ + F R +KV
Sbjct: 382 LTLNGTSFMSRILKV 396
>gi|336453846|ref|YP_004608312.1| Rna-binding protein [Helicobacter bizzozeronii CIII-1]
gi|421882064|ref|ZP_16313357.1| RNA-binding protein [Helicobacter bizzozeronii CCUG 35545]
gi|335333873|emb|CCB80600.1| Rna-binding protein [Helicobacter bizzozeronii CIII-1]
gi|375315779|emb|CCF81353.1| RNA-binding protein [Helicobacter bizzozeronii CCUG 35545]
Length = 85
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
E DL++IYVGN+ Y AT +E+E F G+V+ V ++ ++ PKGF ++E D+ +++
Sbjct: 2 ERDLKNIYVGNLVYSATNKEVEDLFSQFGAVSSVKLIQDRETKRPKGFGFVEMEDEGALK 61
Query: 148 TAMAMDESLFRGRQIKV---NPKR 168
++D + F GR I+V NP++
Sbjct: 62 AISSLDNTDFMGRTIRVTEANPRK 85
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y LE HF CGS+ V I+ N G +GF Y+ F + D+V A
Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 349 LKLNNSELMGRKLRV 363
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y LE HF CGS+ V I+ N G +GF Y+ F + D+V A
Sbjct: 279 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 338
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 339 LKLNNSELMGRKLRV 353
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y LE HF CGS+ V I+ N G +GF Y+ F + D+V A
Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 349 LKLNNSELMGRKLRV 363
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G KGF Y+ F + DSV A
Sbjct: 76 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 135
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 136 LKLNNSELMGRKLRV 150
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L F G+V RV + ++ G P+GF ++E + ++ Q A+ A
Sbjct: 2 SIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDA 61
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRGR 187
+D + + GR IKVN P+ +P +NR P GR
Sbjct: 62 LDSAEWMGRDIKVNKAKPREERKP----SNRRDPGAGGR 96
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
D R++++ NV + AT + L HF+ G+V + T++ G P G AYIEF K+S +
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLK-TLIVTDIAGQPTGSAYIEFLHKESAEQ 570
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
A+ +D + F R +KV R N +S + G PRG
Sbjct: 571 ALTLDNTSFMSRMLKV--VRKNSLEVSQQS-GWPRG 603
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
D R++++ NV + AT + L HF+ G+V + T++ G P G AYIEF K+S +
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLK-TLIVTDIAGQPTGSAYIEFLHKESAEQ 570
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
A+ +D + F R +KV R N +S + G PRG
Sbjct: 571 ALTLDNTSFMSRMLKV--VRKNSLEVSQQS-GWPRG 603
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 51 EEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELES 110
E+A K+ SE + P + + S +E E +S+++GN+ + T E LE
Sbjct: 472 EQAPTGKRAASEATTEEDEAPAPKRAKMNDGSAQESVERS-KSVFIGNLPFSMTKEWLEQ 530
Query: 111 HFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN---PK 167
F CG + RV+I + G KGFA+++FAD+DS + A+ + GR +++N PK
Sbjct: 531 IFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRINYSFPK 590
Query: 168 RTN 170
N
Sbjct: 591 NDN 593
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S++VGN+ + T + L F CGS+ R + ++ G+P+GFAYI+F +DS + A +
Sbjct: 618 SVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENATKL 677
Query: 153 DESLFRGRQIKVN 165
+ GRQI+VN
Sbjct: 678 SGTDLEGRQIRVN 690
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 51 EEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELES 110
E+A K+ SE + P + + S +E E +S+++GN+ + T E LE
Sbjct: 56 EQAPTGKRAASEATTEEDEAPAPKRAKMNDGSAQESVERS-KSVFIGNLPFSMTKEWLEQ 114
Query: 111 HFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN---PK 167
F CG + RV+I + G KGFA+++FAD+DS + A+ + GR +++N PK
Sbjct: 115 IFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRINYSFPK 174
Query: 168 RTN 170
N
Sbjct: 175 NDN 177
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+LE F G+VNRV + ++ G P+GFA++E + TA+ A
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GR +KVN
Sbjct: 62 LDGAQWMGRDLKVN 75
>gi|71654126|ref|XP_815688.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70880762|gb|EAN93837.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDK----QMSMGSPPNSNNLLNLSIEEKKEADL 91
EAEL M+ +V +++E+ +LK LQ + + S G N
Sbjct: 40 EAELQEMQRQVSDLQEDL-RLKTLQETAAQDEGHRKSTGFVATKNT-------------- 84
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
SI+VG +D T EL F CG++ R+T+L +KF G KG AYIEF + +
Sbjct: 85 -SIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGIL 143
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D G+ + V KR N P RGRG
Sbjct: 144 KDGQSLHGKPLNVAMKRDNIPAFQ-------RGRG 171
>gi|71408239|ref|XP_806536.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870310|gb|EAN84685.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDK----QMSMGSPPNSNNLLNLSIEEKKEADL 91
EAEL M+ +V +++E+ +LK LQ + + S G N
Sbjct: 40 EAELQEMQRQVSDLQEDL-RLKTLQETAAQDEGHRKSTGFVATKNT-------------- 84
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
SI+VG +D T EL F CG++ R+T+L +KF G KG AYIEF + +
Sbjct: 85 -SIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGIL 143
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D G+ + V KR N P RGRG
Sbjct: 144 KDGQSLHGKPLNVAMKRDNIPAFQ-------RGRG 171
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 82 SIEEKKEADLRS--IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
++E+KK+ L S ++V N+ Y T EELE HF G+V+ V ++ +K KG AYI
Sbjct: 279 TLEDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIH 338
Query: 140 FADKDSVQTAM-AMDESLFRGRQIKVNP---KRTNRPGIST 176
+ +S + A+ +D S+F+GR + V P K T G+S+
Sbjct: 339 YTLPESAKRALEELDNSIFQGRLLHVMPAELKNTRETGVSS 379
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
KE + V NV + AT ++L F G + + L KF H +GFA++EF K
Sbjct: 701 KEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLR-LPMKFGKH-RGFAFVEFVTKQEA 758
Query: 147 QTAM-AMDESLFRGRQI 162
Q A A+ + GR +
Sbjct: 759 QNAFQALSNTHLYGRHL 775
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R+ +VGN+ + EEL SHF G+V RV I+ + KGF ++EF +KD + A++
Sbjct: 249 RAAFVGNLPFSIRDEELRSHFESAGTVKRVRIVRDSATFMGKGFGFVEFENKDDLLGALS 308
Query: 152 MDESLFRGRQIKV 164
+ ES +GRQI+V
Sbjct: 309 LHESELQGRQIRV 321
>gi|268530138|ref|XP_002630195.1| Hypothetical protein CBG00602 [Caenorhabditis briggsae]
Length = 191
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
L L+ +E+KE D R+++VGN+D TA E+E HF CGSV +V + ++ G K ++
Sbjct: 51 LPLTDQEQKELDSRTVFVGNIDVNTTAREIERHFDVCGSV-KVRFVIDRSTGFQKNHCFV 109
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
E + V+ A ++ + R I V PK++ +
Sbjct: 110 EIENALFVEFAFDLNGTTLNHRYITVRPKKSQK 142
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y A E+LE F G+V R+T+ ++ G P+GFA++E + + + A+ A
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEA 61
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
+D + + GR+++VN + P
Sbjct: 62 LDGAEWMGRELRVNKAKPREP 82
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 89 ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
D R++++ NV + AT + L HF+ G+V + T++ G P G AYIEF K+S +
Sbjct: 316 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLK-TLIVTDIAGQPTGSAYIEFLHKESAEQ 374
Query: 149 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
A+ +D + F R +KV R N +S + G PRG
Sbjct: 375 ALTLDNTSFMSRMLKV--VRKNSLEVSQQS-GWPRG 407
>gi|313143724|ref|ZP_07805917.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
gi|313128755|gb|EFR46372.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
Length = 91
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
L+++YVGN+ Y T +EL F G V V ++ ++ G PKGF ++E D +++
Sbjct: 11 LKTLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVEMEDNAALKAIE 70
Query: 151 AMDESLFRGRQIKVNPKR 168
A++E FRGR ++VN R
Sbjct: 71 ALNEKDFRGRNLRVNEAR 88
>gi|310789593|gb|EFQ25126.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 570
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC V+ V I+ ++ PKGFAY EF D + ++ A+ +
Sbjct: 92 TAHLGNLSYDATEETVNEFFEGCDIVS-VRIIEDREQQRPKGFAYAEFKDLEGLKQALTL 150
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
D F+GR I++ I+ RGG RG
Sbjct: 151 DGQTFQGRAIRIK--------IADPPRGGDRG 174
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
S+YVGN + T E++ F G VN V I+ ++ G P+GFA++EFAD+ + Q A+
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 152 MDESLFRGRQIKVN 165
++ + F GRQ++VN
Sbjct: 66 LNGADFNGRQLRVN 79
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R++++ NV + AT + L HF+ G+V + T++ G P G AYIEF K+S + A
Sbjct: 252 DSRTVFLSNVHFAATKDALSRHFNKFGAVLK-TLIVTDIAGQPTGSAYIEFLHKESAEQA 310
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
+ +D + F R +KV R N +S + G PRG
Sbjct: 311 LTLDNTSFMSRMLKV--VRKNSLEVSQQS-GWPRG 342
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
++VGN+ + AT EE+ HF G + V I +K P+GFAY+E ++ + Q A+++
Sbjct: 341 VFVGNLPFDATKEEIVEHFSKAGDIRHVRIPTDKHSNKPRGFAYVELENEVAYQKALSLH 400
Query: 154 ESLFRGRQIKV 164
+ +GR+I V
Sbjct: 401 HTQIKGRRINV 411
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+DYG T E+L F G V+ I+ +KF G KGF ++E + D A+ +
Sbjct: 2 NIYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIES 61
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
++++ GR IKVN R RP
Sbjct: 62 LNDTDLNGRTIKVNEAKPRAERP 84
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T +EL++ F G ++ V ++ +KF G KGF ++E + A+
Sbjct: 2 NIYVGNLAYGVTQDELKTAFSAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADAAIKG 61
Query: 152 MDESLFRGRQIKVN 165
++E+ +GR +KVN
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|367027658|ref|XP_003663113.1| hypothetical protein MYCTH_2080003 [Myceliophthora thermophila ATCC
42464]
gi|347010382|gb|AEO57868.1| hypothetical protein MYCTH_2080003 [Myceliophthora thermophila ATCC
42464]
Length = 555
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT E + F C VN V I+ ++ PKGFAY EFAD + ++TA+
Sbjct: 82 TAHLGNLSFDATVETVTDFFADCKVVN-VRIIEDRDQNRPKGFAYAEFADLEGLKTALTR 140
Query: 153 DESLFRGRQIKV 164
D +F+GR I+V
Sbjct: 141 DGQIFQGRTIRV 152
>gi|386761306|ref|YP_006234941.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|385146322|dbj|BAM11830.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|396078441|dbj|BAM31817.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi ATCC BAA-847]
Length = 81
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++++YVGN+ Y T +EL F G V V ++ ++ G PKGF ++E D +++
Sbjct: 1 MKTLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVEMEDNAALKAIE 60
Query: 151 AMDESLFRGRQIKVNPKR 168
A++E FRGR ++VN R
Sbjct: 61 ALNEKDFRGRNLRVNEAR 78
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS +VGN+ Y E + HF CG V V I+ ++ G KGF Y+ F D+VQ A+
Sbjct: 273 RSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALK 332
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNR 179
++ S GR+I+V T +TN+
Sbjct: 333 LNNSQLSGRRIRVKRSVTAEAAQKSTNK 360
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ + HF CGSV V ++ ++ G KGF YI F D+VQ A+
Sbjct: 250 RSVFVGNLSFDINELAFRHHFEDCGSVEAVRLVRDQNSGLGKGFGYILFKSADAVQLALK 309
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR-GRG 188
+D S +GR+I+V R + + G +GR G+G
Sbjct: 310 LDGSKLQGRRIRV------RRSLKESENKGAKGRFGKG 341
>gi|381160580|ref|ZP_09869812.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
gi|380878644|gb|EIC20736.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
Length = 94
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T +EL F G V ++ +KF G KGF ++E + TA+ A
Sbjct: 2 NIYVGNLAYGVTQDELRDTFAAYGQVESANLITDKFTGDSKGFGFVEMPNNSEADTAIKA 61
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
++E+ +GR ++VN R++RP
Sbjct: 62 LNETPLKGRPLRVNQAKPRSDRP 84
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGSV V I+ ++ G KGF Y+ F + D+V A
Sbjct: 288 DKRSVFVGNLPYKIEESMVEKHFLDCGSVVAVRIVRDQVTGVGKGFGYVLFENTDAVHLA 347
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 348 LKLNNSELMGRKLRV 362
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD- 142
EE AD ++V N+ Y AT EL++ F G G V+ V ++ ++ KGFA ++FAD
Sbjct: 10 EEAHIADTGRLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGFALVQFADP 69
Query: 143 KDSVQTAMAMDESLFRGRQIKVNP 166
+D+V+ +D S+F+GR I + P
Sbjct: 70 QDAVKAHAELDASIFQGRLIHILP 93
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D + V NV + AT +++ F G VN L KFDG +GFA+++FA K + A
Sbjct: 466 DTCKVVVRNVAFEATRKDIMGLFTPFGHVNSCR-LPRKFDGTHRGFAFVDFATKQEARNA 524
Query: 150 M-AMDESLFRGRQI 162
M A+ + GR++
Sbjct: 525 MEAVQGAHLYGRRL 538
>gi|407851931|gb|EKG05622.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 36 EAELAAMKARVREMEEEAEKLKQLQSEVDK----QMSMGSPPNSNNLLNLSIEEKKEADL 91
EAEL M+ +V +++E+ +LK LQ + + S G N
Sbjct: 40 EAELQEMQRQVSDLQEDL-RLKTLQETAAQDEGHRKSTGFVATKNA-------------- 84
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
SI+VG +D T EL F CG++ R+T+L +KF G KG AYIEF + +
Sbjct: 85 -SIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGIL 143
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D G+ + V KR N P RGRG
Sbjct: 144 KDGQSLHGKPLNVAMKRDNIPAFQ-------RGRG 171
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ Y ++ HF CGSV V I+ NK G KG Y+ F + D+VQ A+
Sbjct: 275 RSVFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALR 334
Query: 152 MDESLFRGRQIKV 164
++ S GR+++V
Sbjct: 335 LNNSELMGRKLRV 347
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 79 LNLSIEEKKEADL-RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
L ++ E K DL RSI+VGN+ + A+ EEL F CG+V V I+ +K KGFAY
Sbjct: 208 LRVTRAETKTFDLHRSIFVGNLPFDASEEELHGAFDSCGTVEGVRIVRDKKYAIGKGFAY 267
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 197
+ F +SV A+ M E RGR ++V+ R + R + +G G R A
Sbjct: 268 VLFELAESVGLAL-MKECQVRGRTLRVSRCRDA----NVIQRQKLKAQGSGAQRRLAGKP 322
Query: 198 GGYRPV 203
G RPV
Sbjct: 323 GAKRPV 328
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ + HF CG+V V ++ +K G KGF Y+ F DSVQ A+
Sbjct: 263 RSVFVGNLSFDINELTFRRHFEECGTVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALK 322
Query: 152 MDESLFRGRQIKV 164
+D S GR I+V
Sbjct: 323 LDGSKLEGRSIRV 335
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G +GF Y+ F + D+V A
Sbjct: 287 DKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 346
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 347 LKLNNSELMGRKLRV 361
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+S F G+V RV+I ++ G P+GFA++E ++ A+ A
Sbjct: 2 SIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR +KVN R
Sbjct: 62 LDGAEWMGRDLKVNKAR 78
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG+V V I+ ++ G +GF Y+ F + D+V A
Sbjct: 284 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 343
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG+V V I+ ++ G +GF Y+ F + D+V A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y TAE+L + F G+V RV + ++ G P+GF ++E D A+ A
Sbjct: 2 SIYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIEA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
+D + + GR +KVN R NRGG R G
Sbjct: 62 LDGAEWMGRNMKVNKARPRE------NRGGNRKNG 90
>gi|315453133|ref|YP_004073403.1| RNA binding protein [Helicobacter felis ATCC 49179]
gi|315132185|emb|CBY82813.1| RNA binding protein [Helicobacter felis ATCC 49179]
Length = 81
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+++IYVGN+ Y AT +E+E + G+V+ V ++ ++ PKGF ++E D D+ +
Sbjct: 1 MKNIYVGNLVYSATEQEVEGLYSQFGAVHSVKLIQDRETKRPKGFGFVEMEDADASKAIS 60
Query: 151 AMDESLFRGRQIKV---NPKR 168
A+D + F GR I+V NP+R
Sbjct: 61 ALDNTDFMGRTIRVTEANPRR 81
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G +GF Y+ F + D+V A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|367050156|ref|XP_003655457.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
gi|347002721|gb|AEO69121.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
Length = 566
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT + + F GC +V V I+ ++ PKGFAY EFAD + +++A+
Sbjct: 79 TAHLGNLSYDATVDTITEFFEGC-NVLSVRIIEDREQNRPKGFAYAEFADLEGLKSALTR 137
Query: 153 DESLFRGRQIKV 164
D +F+GR I++
Sbjct: 138 DGQIFQGRSIRI 149
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ Y ++ HF CGSV V ++ NK G KG Y+ F + D+VQ A+
Sbjct: 294 RSVFVGNLPYKIEETAIQEHFSDCGSVLAVKLVRNKVTGIGKGCGYVLFENTDAVQLALK 353
Query: 152 MDESLFRGRQIKV 164
++ S GR+++V
Sbjct: 354 LNNSELMGRKLRV 366
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G +GF Y+ F + D+V A
Sbjct: 284 DKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 343
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|403216662|emb|CCK71158.1| hypothetical protein KNAG_0G01000 [Kazachstania naganishii CBS
8797]
Length = 131
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKD 144
++ EAD RSI+V + E +E HF CG ++R+T+ K + G+AYIEF
Sbjct: 34 QRAEADTRSIFVRGLSPETGPEVIEDHFKACGPISRITLFSQKRKRNTIGYAYIEFEAVQ 93
Query: 145 SVQTAMAMDESLFRGRQIKVNPKRTN 170
A+ ++ S+ G I V KRTN
Sbjct: 94 GRANALDLNNSILNGYSITVKKKRTN 119
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ ++ G +GF Y+ F + D+V A
Sbjct: 255 DKRSVFVGNLPYKIEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 314
Query: 150 MAMDESLFRGRQIKV-------NPKRTNRPGISTTNRGGPRG 184
+ ++ S GR+++V K + PG+ ++ +G
Sbjct: 315 LKLNNSELMGRKLRVMRSVNKEKLKSNSNPGLKNVSKPNKQG 356
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGNV Y T EE+ ++F G VN V I+ ++ G P+GFA++EF+++ Q A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 152 MDESLFRGRQIKVN 165
++ F GR ++VN
Sbjct: 67 LNGVAFNGRNLRVN 80
>gi|213404256|ref|XP_002172900.1| RNA-binding protein rnp24 [Schizosaccharomyces japonicus yFS275]
gi|212000947|gb|EEB06607.1| RNA-binding protein rnp24 [Schizosaccharomyces japonicus yFS275]
Length = 414
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + AT E L +F G + RV ++ + G KGF +++F D ++ Q AMAM
Sbjct: 267 TLFVGNLPFDATKETLSEYFGDAGRIRRVRLMTFEDTGKCKGFGFVDFFDVETAQRAMAM 326
Query: 153 DESLFR-----GRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY-RPVRRA 206
+R R +V P R R TN G G G G A Y RPV+R+
Sbjct: 327 SHDTWRLEYGQDRSKRVRPARAAR-----TNNSGDYGDGADETGSGEA--DSYERPVKRS 379
Query: 207 R 207
R
Sbjct: 380 R 380
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ + + HF CG+V V ++ +K G KGF Y+ F DSVQ A+
Sbjct: 264 RSVFVGNLPFDIHEQAFRKHFETCGTVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALE 323
Query: 152 MDESLFRGRQIKV 164
++ S GR I+V
Sbjct: 324 LNASKLEGRSIRV 336
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS +VGN+ Y E + HF CG V V I+ ++ G KGF Y+ F D+VQ A+
Sbjct: 273 RSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALK 332
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNR 179
++ S GR+I+V T +TN+
Sbjct: 333 LNNSQLSGRRIRVKRSVTAEAVQKSTNK 360
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS ++GN+ Y E + HF CG V V I+ ++ G KGF Y+ F D+VQ A+
Sbjct: 271 RSAFIGNLPYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALK 330
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNR 179
++ S GR+I+V T +TN+
Sbjct: 331 LNNSELSGRKIRVKRSLTAEAAQKSTNK 358
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS+++GN+ +E+ HF CG V V ++ ++ G KGF ++ F D +V A
Sbjct: 408 DKRSVFLGNLPLEVQEDEVRLHFQECGEVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLA 467
Query: 150 MAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA 194
+ M E +FRGR+++V P G +++ G +G + + +G
Sbjct: 468 LKMHEEVFRGRKLRVMPS-----GDKQSDKKGAKGNFKLKYEKGV 507
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 25/121 (20%)
Query: 76 NNLLNLSIEEKK-----EADLRSIYVGNVDYGATAEELESHFHGCGSV------------ 118
+ ++ +S KK EAD R++++GN+ A +++ F GCGS+
Sbjct: 285 DEVIKVSTRPKKRKRDPEADKRTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSN 344
Query: 119 ----NRVTILCNKFDGHPKGF-AYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPG 173
R ++ F F AYI F +++S A+ ++ F ++V+ + PG
Sbjct: 345 PKLPKRAALITKDFHESMASFNAYIVFKEQESATKALKLNGEKFLNFHLRVD---SLHPG 401
Query: 174 I 174
+
Sbjct: 402 V 402
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS ++GN+ Y E + HF CG V V I+ ++ G KGF Y+ F D+VQ A+
Sbjct: 271 RSAFIGNLPYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALK 330
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNR 179
++ S GR+I+V T +TN+
Sbjct: 331 LNNSELSGRKIRVKRSLTAEAAQKSTNK 358
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
S+YVGNV Y T E++ ++F G VN V I+ ++ G P+GFA++E+ D+ Q A+
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
Query: 152 MDESLFRGRQIKVN 165
++ + F GR ++VN
Sbjct: 67 LNGTSFNGRNLRVN 80
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+ Y AT ++L++ F G+V RV + ++ G +GFA++E D+ ++A++
Sbjct: 2 TIYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAISQ 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+D + + GRQ++VN R NRGG R
Sbjct: 62 LDGAEWMGRQLRVNKARPR-----DNNRGGSR 88
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS+++GN+ Y +E HF CGS+ V I+ + G KGF Y+ F + D+V A
Sbjct: 283 DKRSVFIGNLPYKVEETAVEEHFLDCGSIVAVRIVRDPVTGVGKGFGYVLFENTDAVHLA 342
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 343 LKLNNSELMGRKLRV 357
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
++VGN+ Y AT ++L HF G G V V I+C++ G +GFA++ F+ + A+ +
Sbjct: 6 VFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENL 65
Query: 153 DESLFRGRQIKVNPKRTNR 171
+ES RGR + V ++ R
Sbjct: 66 NESDVRGRNVSVRQAQSKR 84
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGNV Y + EE+ F G VN V I+ ++ G P+GFA++EF D+ Q A+
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQ 66
Query: 152 MDESLFRGRQIKVN 165
++ + F GR ++VN
Sbjct: 67 LNGASFNGRNLRVN 80
>gi|261855638|ref|YP_003262921.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
gi|261836107|gb|ACX95874.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
Length = 98
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y + ++ S F G V ++ + G KGFA++E ADK + TA+
Sbjct: 3 NIYVGNLSYQSGDADVRSAFEAFGEVKSAKVIQDMATGRSKGFAFVEMADKAAGMTAIEQ 62
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 189
+D + GR I+VN RP T +RGG RG R R
Sbjct: 63 LDNTDLNGRNIRVNEA---RPRERTNDRGGDRGEFRSR 97
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y AT E++ + F G+V RV + ++ G P+GFA++E + +D +A+ A
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR ++VN R
Sbjct: 62 LDGAEWMGRDLRVNKAR 78
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS+++GN+ Y + + HF CG V V I+ ++ G KGF Y+ F + D+V A+
Sbjct: 257 RSVFLGNLAYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALK 316
Query: 152 MDESLFRGRQIKVN--PKRTNRPGISTTNRG-GPRGRGR 187
++ S GR+++V ++ P STT+R GP+ R +
Sbjct: 317 LNNSDLMGRKLRVKRCSEKGKAPQKSTTSRSHGPKARAQ 355
>gi|427419443|ref|ZP_18909626.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425762156|gb|EKV03009.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 86
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF-ADKDSVQTAMA 151
SIYVGN+ Y + E+++ F G+V RVT+ ++ G P+GFA++E AD + A
Sbjct: 2 SIYVGNIAYTVSQEDIQEVFADYGTVKRVTVPMDRETGRPRGFAFVEMSADAEEDAAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR+I+VN R
Sbjct: 62 LDGAEWLGREIRVNKAR 78
>gi|320589761|gb|EFX02217.1| translation initiation factor 4b [Grosmannia clavigera kw1407]
Length = 593
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
++GN+DY E++ GC V V ++ ++ PKGF Y EFA+ D ++ A+A+D
Sbjct: 82 HLGNLDYEIMDEDIRLFLEGC-EVTSVRLIEDRETKRPKGFGYAEFANVDGLKKALALDG 140
Query: 155 SLFRGRQIKV 164
S FRGR IKV
Sbjct: 141 SSFRGRSIKV 150
>gi|270159743|ref|ZP_06188399.1| RNA binding protein [Legionella longbeachae D-4968]
gi|289165486|ref|YP_003455624.1| hypothetical protein LLO_2158 [Legionella longbeachae NSW150]
gi|269988082|gb|EEZ94337.1| RNA binding protein [Legionella longbeachae D-4968]
gi|288858659|emb|CBJ12554.1| putative N-terminal part of eukaryotic RNA-binding protein
precursor [Legionella longbeachae NSW150]
Length = 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVGN+ +G T L++ F G V + ++ ++F GH KGF +I F+ + ++++ M+
Sbjct: 6 IYVGNLPFGITEAALQAEFSKYGKVEELLLIKDRFTGHVKGFGFITFSTQQEAESSLKMN 65
Query: 154 ESLFRGRQIKVNPKRTN 170
L GR +KV + N
Sbjct: 66 GQLLVGRALKVTMAQVN 82
>gi|159128731|gb|EDP53845.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
A1163]
Length = 1303
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I++ N+D+ A ++L+ F G++ V I K DG KGF YI F+ K+ +TA+A
Sbjct: 1001 REIHISNIDWKANEDDLKEVFQKYGTIETVRI-PRKVDGGSKGFGYIVFSTKEEAETALA 1059
Query: 152 MDESLFRGRQIKV---NPKRTNRPGISTTNR 179
M E FR R ++V P+ R + NR
Sbjct: 1060 MHEQEFRSRPLQVRISTPQGAKRTATTIVNR 1090
>gi|390949102|ref|YP_006412861.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
gi|390425671|gb|AFL72736.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
Length = 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T EEL F G ++ V ++ +KF G KGF ++E + A+
Sbjct: 2 NIYVGNLAYGVTQEELRDAFGAYGEISSVNLITDKFTGDSKGFGFVEMPNNAEADAAIKG 61
Query: 152 MDESLFRGRQIKVN 165
++E+ +GR +KVN
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 82 SIEEKKEADLRS--IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
++E+KK+ L S ++V N+ Y T EELE HF G+V+ V ++ +K KG AYI
Sbjct: 279 TLEDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIH 338
Query: 140 FADKDSVQTAM-AMDESLFRGRQIKVNP 166
+ +S + A+ +D S+F+GR + V P
Sbjct: 339 YTLPESAKRALEELDNSIFQGRLLHVMP 366
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
KE + V NV + AT ++L F G + + L KF H +GFA++EF K
Sbjct: 698 KEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLR-LPMKFGKH-RGFAFVEFVTKQEA 755
Query: 147 QTAM-AMDESLFRGRQI 162
Q A A+ + GR +
Sbjct: 756 QNAFQALSNTHLYGRHL 772
>gi|30682379|ref|NP_180012.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737785|dbj|BAF00831.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|190016014|gb|ACE62895.1| At2g24350 [Arabidopsis thaliana]
gi|330252471|gb|AEC07565.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 537
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 37 AELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYV 96
+E+ +K +++E+E + KQL+ + ++ SP + + + E R I+V
Sbjct: 395 SEIKNVKEKMQELELRIIQSKQLKKQKVEERK-PSPQSGESQYQEDVSES-----RVIHV 448
Query: 97 GNVDYGATAEELESHFHG-CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
NV Y A E + F CG+V V ++ + HPKG A++ FA K+SV A+A+ +
Sbjct: 449 TNVYYAAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGT 508
Query: 156 LFRGRQIKV 164
+F R IKV
Sbjct: 509 MFYSRPIKV 517
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN Y T +E+ F G+V V I+ ++ G P+GFA++EF+++ S + A+
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 152 MDESLFRGRQIKVN 165
++ + F GRQ++VN
Sbjct: 67 LNGADFNGRQLRVN 80
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+S F G+V++V + ++ G P+GF ++E +++ A+ A
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDA 61
Query: 152 MDESLFRGRQIKVNPKR 168
++ F+GRQ+KVN R
Sbjct: 62 LNGKEFKGRQLKVNKAR 78
>gi|70988933|ref|XP_749317.1| pre-mRNA splicing factor (Prp24) [Aspergillus fumigatus Af293]
gi|66846948|gb|EAL87279.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
Af293]
Length = 1303
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I++ N+D+ A ++L+ F G++ V I K DG KGF YI F+ K+ +TA+A
Sbjct: 1001 REIHISNIDWKANEDDLKEVFQKYGTIETVRI-PRKVDGGSKGFGYIVFSTKEEAETALA 1059
Query: 152 MDESLFRGRQIKV---NPKRTNRPGISTTNR 179
M E FR R ++V P+ R + NR
Sbjct: 1060 MHEQEFRSRPLQVRISTPQGAKRTATTIVNR 1090
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ Y AT ++L F G V V I+ +K G +G A++E A+KD A+
Sbjct: 2 NIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDG 61
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
++ + RGR+IKVN +P
Sbjct: 62 LNGTQIRGREIKVNEALPKKP 82
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG++ V I+ ++ G KGF Y+ F + D+V A
Sbjct: 265 DKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGYVLFENTDAVHLA 324
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 325 LKLNNSELMGRKLRV 339
>gi|304311883|ref|YP_003811481.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
gi|301797616|emb|CBL45837.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
Length = 92
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG + EEL+ F G V V+++ +KF G KGF ++E + A+
Sbjct: 2 NIYVGNLAYGVSEEELKEAFGAFGEVASVSLIKDKFTGQSKGFGFVEMPNNSEADAAIKG 61
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
M++ +GR IKVN R +RP
Sbjct: 62 MNDKPLKGRPIKVNQAKPREDRP 84
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM- 150
+ IYVGN++Y E L+ F G VN V I+ +++ G KGF ++E + D+ + A+
Sbjct: 3 KKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAIS 62
Query: 151 AMDESLFRGRQIKVN--PKRTNRP 172
A+D + GR+++VN +R RP
Sbjct: 63 ALDGTSLDGRELRVNEAKERERRP 86
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-- 150
SIYVGN+ Y T E+L+ F G+VNRV + ++ G P+GFA++E + D+ +TA
Sbjct: 2 SIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEM-ETDAQETAAIE 60
Query: 151 AMDESLFRGRQIKVN 165
A+D + + GR +KVN
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 53/84 (63%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
+ ++KK +SI++GN+ + + E L S F CG + V ++ ++ KGF Y++FA
Sbjct: 270 TTQQKKYDHKKSIFIGNLLFDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFA 329
Query: 142 DKDSVQTAMAMDESLFRGRQIKVN 165
++ SV A+ ++++ +GRQ++++
Sbjct: 330 ERSSVSLALKLNDTDLQGRQVRIS 353
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+S F G+V RV+I ++ G P+GFA++E + A+ A
Sbjct: 2 SIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIEA 61
Query: 152 MDESLFRGRQIKVNPK--RTNRPGISTTNRGGPRGRGR 187
+D + + GR +KVN R N+ GG R RGR
Sbjct: 62 LDGAEWMGRDLKVNKAKPRENKGSFG----GGNRQRGR 95
>gi|381157372|ref|ZP_09866606.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
gi|380881235|gb|EIC23325.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
Length = 94
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T +EL F G V ++ +KF G KGF ++E + A+ A
Sbjct: 2 NIYVGNLAYGVTQDELRDAFAAYGDVESANLITDKFTGQSKGFGFVEMPNNSEADAAIKA 61
Query: 152 MDESLFRGRQIKVN 165
++E+ +GR I+VN
Sbjct: 62 LNETPLKGRPIRVN 75
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
++LS + K R++++GN+ + T +E+ HF CG + V I+ ++ G +G Y+
Sbjct: 421 VDLSTKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYV 480
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKV 164
F ++DSV A+ ++ + + R+I+V
Sbjct: 481 NFENQDSVTLALELNGTNLKNREIRV 506
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN----------------RVTIL 124
LS EE+ D R+IYVGNV T + ++ F G ++ +V +
Sbjct: 321 LSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVATI 380
Query: 125 CNKFDGHPK---GFAYIEFADKDSVQTAMAMD 153
K HPK + Y+ F ++ S + A+ ++
Sbjct: 381 TKKM--HPKVSTVYVYVAFKEEQSAKDALKLN 410
>gi|189500331|ref|YP_001959801.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189495772|gb|ACE04320.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 89
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA-DKDSVQTAMA 151
+IY+GN+DYG + E+L F G V+ I+ +KF G KGF ++E D ++ Q A
Sbjct: 2 NIYIGNLDYGVSEEDLREAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDA 61
Query: 152 MDESLFRGRQIKVNPKR 168
++++ GR IKVN R
Sbjct: 62 LNDTDLNGRSIKVNQAR 78
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM- 150
R +++GN+ YG + E + F CG V ++ +K G PKGF ++E++D DS Q+A+
Sbjct: 9 RVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIR 68
Query: 151 AMDESLFRGRQIKVNPKRTNR 171
++E GR ++V+ NR
Sbjct: 69 NLNEYELNGRTLRVDFSNDNR 89
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R +Y GN+ Y T EE+ F CGS+ RV++L + KG A+I F ++ ++A
Sbjct: 505 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 558
Query: 150 MAMDESLFRGRQIKVN 165
+ +++ ++GR +++N
Sbjct: 559 IQWNQTEYKGRMLRIN 574
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S+ V N+ + + E ++S F+GCG V RV+I G +GFA +EF + + +Q A+ +
Sbjct: 593 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 652
Query: 153 DESLFRGRQIKV 164
+ GR++ +
Sbjct: 653 SGTSMNGREVTI 664
>gi|322704001|gb|EFY95601.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 555
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC V+ V I+ ++ PKGF Y+EFAD + ++ A+ +
Sbjct: 84 TAHLGNLAYDATNESVTEFFEGCEVVS-VRIIEDREMQRPKGFGYVEFADIEGLKKALTL 142
Query: 153 DESLFRGRQIKV---NPKR--TNRPG-----ISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
D F GR IK+ +P R +R G +S R GP GR R + +GG R
Sbjct: 143 DGESFNGRMIKIKIADPPRGGDSRGGESSRDLSDWTRKGPLPDLPGRGGRAGSDFGGDRE 202
Query: 203 VRRAR 207
R R
Sbjct: 203 RRPPR 207
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CGS+ V I+ + G +GF Y+ F + D+V A
Sbjct: 290 DKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLFENTDAVHLA 349
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 350 LKLNNSELMGRKLRV 364
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R +Y GN+ Y T EE+ F CGS+ RV++L + KG A+I F ++ ++A
Sbjct: 541 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 594
Query: 150 MAMDESLFRGRQIKVN 165
+ +++ ++GR +++N
Sbjct: 595 IQWNQTEYKGRMLRIN 610
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S+ V N+ + + E ++S F+GCG V RV+I G +GFA +EF + + +Q A+ +
Sbjct: 629 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 688
Query: 153 DESLFRGRQIKV 164
+ GR++ +
Sbjct: 689 SGTSMNGREVTI 700
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+ F G+VNRV + ++ G P+GFA++E Q A+ A
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVEMETDVQEQAAIDA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GR +KVN
Sbjct: 62 LDGAEWMGRDLKVN 75
>gi|452986085|gb|EME85841.1| hypothetical protein MYCFIDRAFT_202293 [Pseudocercospora fijiensis
CIRAD86]
Length = 547
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+DY T+ ++E C V V I+ +K D PKGF Y+EF D ++ A+
Sbjct: 112 TAHLGNLDYNVTSADIEDFLADC-EVTTVRIMEDKVDRKPKGFGYVEFGSADGLRKALDK 170
Query: 153 DESLFRGRQIKVN 165
E+ F GR IK++
Sbjct: 171 TEASFMGRNIKIS 183
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+ F G+V+RV + ++ G P+GFA++E Q A+ A
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRG 180
+D + + GR +KVN K R S++ RG
Sbjct: 62 LDGAEWMGRDLKVN-KAKPREDRSSSPRG 89
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L SHF CG + V I+ + KGFAYI+F D SV A+
Sbjct: 295 RSIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNKALL 354
Query: 152 MDESLF----RGRQIKV----NPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYG 198
+++ F R+++V N K+ + ++ N+ + ++ R + G
Sbjct: 355 LNDKKFDNTKTTRKLRVSRCKNIKKPSSSSATSNNKQKLNESQKTKIGRAKRILG 409
>gi|354568213|ref|ZP_08987379.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353541178|gb|EHC10648.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 103
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y AT E+L++ F G V RV + ++ G +GFA++E + + A+
Sbjct: 13 TIYVGNLSYSATEEDLKAVFAEYGQVKRVVLPTDRDTGRLRGFAFVEMNEDTQEEAAITE 72
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNR 179
+D + + GRQ+KVN P+ NR G S R
Sbjct: 73 LDGAEWMGRQLKVNKARPREDNRRGSSWAKR 103
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
S+YVGN + + EE+ + F G+V V I+ ++ G P+GFA++EFAD+ Q A+
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 152 MDESLFRGRQIKVN 165
++ + F GRQ++VN
Sbjct: 67 LNGAEFNGRQLRVN 80
>gi|405960659|gb|EKC26560.1| hypothetical protein CGI_10004059 [Crassostrea gigas]
Length = 219
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
++VGN+ Y T E+LE HF G V V I K G KGFAY+EF ++ S A+ +
Sbjct: 115 LFVGNLPYSVTKEQLEEHFRKTGGVKAVRIPKEKGTGKSKGFAYVEFKNRISHGIALRLH 174
Query: 154 ESLFRGRQIKV 164
+ GR+I V
Sbjct: 175 HTTLGGRKINV 185
>gi|402086166|gb|EJT81064.1| translation initiation factor 4B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F C V+ V I+ ++ G PKGF Y+EFA D ++ A+ +
Sbjct: 52 TAHLGNLSYDATQEIVSDFFAECEIVS-VRIVEDREQGRPKGFGYVEFASADGLKQALTL 110
Query: 153 DESLFRGRQIKV 164
D + F+GR I+V
Sbjct: 111 DGASFQGRSIRV 122
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
EA R+++V N+D+ + L+ F CG++ + L K G KGFAYIEF +K S+
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIR-LVRKPSGQSKGFAYIEFEEKSSLA 744
Query: 148 TAMAMDESLFRGRQIKVNP 166
A++ D GR + V+P
Sbjct: 745 FALSKDRQFMNGRPVLVDP 763
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF-ADKDSVQT 148
D R+++V +D+ T +++ + F G+V V ++ G P+GFAY+EF A +D+
Sbjct: 781 DPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMVTT-LAGKPRGFAYVEFEASRDAATA 839
Query: 149 AMAMDESLFRGRQIKV---NPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
M +D++ F+GRQ++V NP G RG P+ RG+ + A GG +P
Sbjct: 840 IMNLDKAEFKGRQLQVALSNPPSKGHAG--EGERGPPQRDHRGQGA--ATAMGGMQP 892
>gi|440640712|gb|ELR10631.1| hypothetical protein GMDG_04900 [Geomyces destructans 20631-21]
Length = 561
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 75 SNNLLNLSIEEK---KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
S NL S+ E+ + ++++GN+ + AT ++ F C N V I+ +K +
Sbjct: 57 SGNLAGYSVREELPLPDKPPYTVHLGNLSFDATVGDVTDFFADCECTN-VRIIEDKLEMK 115
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN----PKRTNRPGI 174
PKGF Y EF ++ + A+A+ S F+GR I+V+ PK +RP +
Sbjct: 116 PKGFGYAEFGSREGLIKALALSGSQFQGRNIRVSVADPPKDRDRPDV 162
>gi|453087479|gb|EMF15520.1| hypothetical protein SEPMUDRAFT_147385 [Mycosphaerella populorum
SO2202]
Length = 600
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+DY T+ +LE C +V V ++ +K D PKGF Y EF + +Q A+
Sbjct: 112 TAHLGNLDYNVTSVDLEGFLADC-NVTVVRLMEDKVDRKPKGFGYAEFGSPEGLQKALDR 170
Query: 153 DESLFRGRQIKV---NPKRTNR 171
ES F GR IK+ +P R +R
Sbjct: 171 SESNFMGRNIKISVADPPRNDR 192
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
+YVGN+ Y + ++ + +F G V I+ ++F G KGF ++EFADK++ + A+ +
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 153 DESLFRGRQIKVNPKRT--NRPGISTTNRG 180
+ S F GR I VN + +RP + RG
Sbjct: 63 NGSNFEGRSIVVNEAKPMEDRPPRRSKTRG 92
>gi|322380256|ref|ZP_08054477.1| RNA-binding protein [Helicobacter suis HS5]
gi|321147334|gb|EFX42013.1| RNA-binding protein [Helicobacter suis HS5]
Length = 82
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
L++IYVGN+ Y AT +++E F G+VN V ++ ++ PKGF ++E D+ + +
Sbjct: 2 LKNIYVGNLVYSATNQDVEELFSQFGAVNSVKLIQDRETKRPKGFGFVEMEDEGAQKAIS 61
Query: 151 AMDESLFRGRQIKV---NPKR 168
++D + F GR I+V NP++
Sbjct: 62 SLDNTDFMGRTIRVTEANPRK 82
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN+ Y AT E+L++ F G+V RV + ++ G P+GFA++E +D A+
Sbjct: 2 SVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEG 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D S GR +KVN R
Sbjct: 62 LDGSELMGRILKVNKAR 78
>gi|340503205|gb|EGR29817.1| RNA binding motif protein 34, putative [Ichthyophthirius
multifiliis]
Length = 330
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 26 MEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEE 85
+ ++SK +A A M +V+ +++ ++ +V ++ S N +NL +
Sbjct: 98 IPVEKSKIGKKA--AIMLKQVKYDQQQNQQF--FIKKVQRRQSWIKNSKKNIYINLFLNL 153
Query: 86 KKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDS 145
KK ++I++GN+ + T E L +HF CG++ + I+ + + + KGF YI F D S
Sbjct: 154 KKLDYTKTIFIGNLPFQITEEALRNHFIDCGNIQNLRIIRDPYTHNGKGFGYIYFEDILS 213
Query: 146 VQTAMAMDESLFRGRQIKV 164
+ A+ + SL R I+V
Sbjct: 214 FKNALLKNGSLLEKRSIRV 232
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+++++GNV +G ++L +HF CG V+ V I+ ++ G KG A++ F + + A+
Sbjct: 229 KTVFIGNVPFGTQEDDLCAHFEKCGDVDFVRIVRDRATGIGKGIAFVAFKETAVIPIALK 288
Query: 152 MDESLFRGRQIKVN 165
MD S F GRQ++V
Sbjct: 289 MDGSDFGGRQLRVT 302
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R +Y GN+ Y T EE+ F CGS+ RV++L + KG A+I F ++ ++A
Sbjct: 269 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 322
Query: 150 MAMDESLFRGRQIKVN 165
+ +++ ++GR +++N
Sbjct: 323 IQWNQTEYKGRMLRIN 338
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S+ V N+ + + E ++S F+GCG V RV+I G +GFA +EF + + +Q A+ +
Sbjct: 357 SVIVRNIPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 416
Query: 153 DESLFRGRQIKV 164
+ GR++ +
Sbjct: 417 SGTSMNGREVTI 428
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+ Y + L++HF CG++ V ++ ++ G KGF Y+ F DSV A+
Sbjct: 252 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 311
Query: 152 MDESLFRGRQIKV 164
++ S + R+I+V
Sbjct: 312 LNGSTLQQRKIRV 324
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+ Y + L++HF CG++ V ++ ++ G KGF Y+ F DSV A+
Sbjct: 251 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 310
Query: 152 MDESLFRGRQIKV 164
++ S + R+I+V
Sbjct: 311 LNGSTLQQRKIRV 323
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y T E+L F G+V RV + ++ G P+GF ++E +D+ + A++
Sbjct: 2 SIYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISE 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTN 178
+D + + GR +KVN + G S T+
Sbjct: 62 LDGARWMGRVLKVNKAKPREEGGSRTS 88
>gi|443477394|ref|ZP_21067245.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017490|gb|ELS31918.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 95
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y A ++L S F G+V RV + ++ G +GFA+++ D + A+ A
Sbjct: 2 TIYVGNLSYQAAKDDLTSVFSDYGTVKRVQLPTDQETGRVRGFAFVDMEDDAQEEAAIAA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
++E+ + GR ++VN +P TN PRGRG
Sbjct: 62 LNEAEWMGRTLRVNKA---KPRGERTNNDRPRGRG 93
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG++ V I+ + G +GF Y+ F + D+V A
Sbjct: 269 DKRSVFVGNLPYKVGESAVEHHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLA 328
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 329 LKLNNSELMGRKLRV 343
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S++VG +D T +L F CG++ R+T+L +KF G KG AYIEF + A+
Sbjct: 65 SVFVGGMDPRTTESDLRVFFSACGTIKRLTMLRDKFTGQQKGTAYIEFETVEQAAAAIVK 124
Query: 153 DESLFRGRQIKVNPKRTNRPGI 174
+ G+ + V KR N P
Sbjct: 125 NGQSLHGKPLTVAMKRDNIPAF 146
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG + V I+ ++ G +GF Y+ F + D+V A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEEHFLDCGHIVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 344
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|365989592|ref|XP_003671626.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
gi|343770399|emb|CCD26383.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
Length = 128
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 85 EKKEADLRSIYVGNVDYGATAEELESHFHGCGS-VNRVTILCNKFDGHPKGFAYIEFADK 143
E+ +AD RSI+V N+ T E++ESHF G+ + R+T+ D H KG AYIEF +
Sbjct: 27 EQLDADSRSIFVNNISIDMTPEQIESHFKEFGNHIVRITLFT---DRHSKGCAYIEFDNV 83
Query: 144 DSVQTAMAMDESLFRGRQIKVNPKRTNRP 172
+ + A+ + + F G I V KRTN P
Sbjct: 84 EVRELALNSNGTPFNGSVIGVFRKRTNLP 112
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ A+ ++L+ F G V V I K DG KGF YI F+ K+ A+A
Sbjct: 1006 REIHVSNIDWKASEDDLKDLFSKYGRVETVRI-PRKVDGGSKGFGYIVFSTKEEANAALA 1064
Query: 152 MDESLFRGRQIKV---NPKRTNRPGISTTNRGG 181
M E FR R ++V P+ R + NR G
Sbjct: 1065 MHEQEFRSRPLQVRLSTPQGAKRSATTIVNRVG 1097
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S+ +++ + ++ V N+ G T + F CG+VN V +L D A IEF
Sbjct: 829 SVALRRDREHSTVVVKNLPRGITEHRVRQFFRHCGTVNSVKMLPG--DDKNSETAIIEFE 886
Query: 142 DKDSVQTAMAMDESLFRGRQIKVN 165
+D A D+ L I+V+
Sbjct: 887 TRDEALVAQTRDQKLIDDNAIEVH 910
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y AT E+L + F G+V RV + ++ G +GFA++E ++ +A++
Sbjct: 2 TIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFVEMTEETQEDSAISE 61
Query: 152 MDESLFRGRQIKVN---PKRTNR 171
+D + + GRQ++VN PK NR
Sbjct: 62 LDGAEWMGRQLRVNKARPKEDNR 84
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 79 LNLSIEEKKEADL-RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAY 137
L L I E A S+YVGNV Y T EE+ ++F G VN V I+ ++ G P+GFA+
Sbjct: 58 LFLKISETTMASQGFSVYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAF 117
Query: 138 IEFADKDSVQTAM-AMDESLFRGRQIKVN 165
+E++++ Q A+ ++ + F GR ++VN
Sbjct: 118 VEYSEEAGAQRAVEELNGAAFNGRNLRVN 146
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+D+ + E L HF CG + V I+ + KGFAY++FAD SV A+
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 152 MDE---SLFRGRQIKVN 165
+++ ++ +GR+++V
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+++IYVGN+ + +T +E+ F G V V ++ ++ G P+GF ++E D + +
Sbjct: 1 MKNIYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEMEDGGADKAIE 60
Query: 151 AMDESLFRGRQIKVNPKRTNRP 172
A+D + F GR ++VN R +P
Sbjct: 61 ALDGTTFGGRSLRVNEARERKP 82
>gi|66576254|gb|AAY51685.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+DY T +L F G+V++ ++ +KF G KGF ++E D A++
Sbjct: 2 NIYIGNLDYNVTEADLSGAFGEFGTVSKANVIIDKFTGRSKGFGFVEMPDDAEANEAISQ 61
Query: 152 MDESLFRGRQIKVN 165
++ES GR+I+VN
Sbjct: 62 LNESSLNGRKIRVN 75
>gi|428178044|gb|EKX46921.1| hypothetical protein GUITHDRAFT_162845 [Guillardia theta CCMP2712]
Length = 824
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S+ E+++ D R +YV + + E ++ HF V V ++ ++ DG+ +GF Y+EF
Sbjct: 645 SLNEQRDVDQRVLYVSGLSKNVSKESIKDHFSTVAEVLEVRLMRDR-DGNLRGFCYVEFK 703
Query: 142 DKDSVQTAMAMDESLFRGRQIKV---NPKRTNRPGISTTNRGG 181
D+ + ++ MD+++F+G++++V +P R N G
Sbjct: 704 DRAGAELSLQMDQTVFQGKKLRVAFSDPSRGRAASSKAANSGS 746
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+D+ + E L HF CG + V I+ + KGFAY++FAD SV A+
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 152 MDE---SLFRGRQIKVN 165
+++ ++ +GR+++V
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T ++L+ F G V+RV + ++ G +GFA++E +D A+ A
Sbjct: 2 SIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTT-NRGGPRGR 185
+D + + GR +KVN + P S N GG GR
Sbjct: 62 LDGAEWMGRDLKVNKAKPREPRTSPRGNWGGSAGR 96
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 57 KQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCG 116
KQ+ +D Q+S + P+ L + K + R+I+VGN+D +T E+L F G
Sbjct: 132 KQMIQTIDPQLSAMNLPSYPLLPGGTDPSKVDEIRRTIFVGNLDSISTPEQLLQFFTQAG 191
Query: 117 SVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
V V + + + P FA++EF ++ S+ A+ ++ SLF GR ++VN
Sbjct: 192 EVKYVRMAGD--ETLPTRFAFVEFTEQASLLKALVLNGSLFSGRPVRVN 238
>gi|322692273|gb|EFY84203.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 552
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC V+ V I+ ++ PKGF Y+EFAD + ++ A+ +
Sbjct: 80 TAHLGNLAYDATNETVTEFFEGCEIVS-VRIIEDREMQRPKGFGYVEFADIEGLKKALTL 138
Query: 153 DESLFRGRQIKV---NPKR--TNRPG-----ISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
D F GR IK+ +P R +R G +S R GP GR R + +GG R
Sbjct: 139 DGESFNGRMIKIKIADPPRGGDSRGGESSRDLSDWTRKGPLPDLPGRGGRTGSDFGGDRE 198
Query: 203 VRRAR 207
R R
Sbjct: 199 RRPPR 203
>gi|380477345|emb|CCF44211.1| translation initiation factor 4B [Colletotrichum higginsianum]
Length = 350
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC V+ V I+ ++ PKGFAY EF D + ++ A+ +
Sbjct: 102 TAHLGNLSYDATEETVNEFFEGCDIVS-VRIIEDREQQRPKGFAYAEFKDLEGLKQALTL 160
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
D F+GR I++ I+ R G RG
Sbjct: 161 DGQTFQGRAIRIK--------IADPPRSGDRG 184
>gi|399108266|gb|AFP20557.1| RNA-binding protein [uncultured bacterium]
Length = 114
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
+YVGN++Y + ELE F G+V V ++ ++ G KGF ++E Q AM A+
Sbjct: 5 LYVGNLNYRTNSAELEQLFAAYGTVKSVQVISDRHTGQSKGFGFVEMGSAQEAQAAMNAL 64
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGG 181
+ F GR + VN RP NRGG
Sbjct: 65 NGKDFNGRNLTVNEA---RPQTENQNRGG 90
>gi|32265818|ref|NP_859850.1| hypothetical protein HH0319 [Helicobacter hepaticus ATCC 51449]
gi|32261867|gb|AAP76916.1| hypothetical protein HH_0319 [Helicobacter hepaticus ATCC 51449]
Length = 83
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++++YVGN+ Y T +E++ F G V V ++ ++ G PKGF ++E D+ + +
Sbjct: 1 MKTLYVGNLVYAVTRDEVQDLFSQFGEVFSVKLINDRESGKPKGFGFVEMDDEAAPKAID 60
Query: 151 AMDESLFRGRQIKVNPKR 168
A++E FRGR ++VN R
Sbjct: 61 ALNEKDFRGRNLRVNEAR 78
>gi|347837372|emb|CCD51944.1| similar to translation initiation factor eIF4B [Botryotinia
fuckeliana]
Length = 575
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++++GN+ + AT ++ F GC +N V I+ +K + PKGF Y EF + +++A+ +
Sbjct: 81 TVHLGNLSFDATVGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 139
Query: 153 DESLFRGRQIKVN----PK-RTNRPGI 174
+++ F+GR I+++ PK R +RP +
Sbjct: 140 NQTQFQGRNIRISVADPPKDRGDRPDV 166
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + E L + F CG+V I+ +K G KGF Y+ F D++ AMA+
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAMAL 243
Query: 153 DESLFRGRQIKVN------PKRTNRPG 173
+ GR+I+V+ P+ NR G
Sbjct: 244 TGTELDGREIRVDVSTPKPPRDGNRQG 270
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 62 EVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV 121
E+ +S PP N E + A ++++GN+ + T +E+ F G + V
Sbjct: 252 EIRVDVSTPKPPRDGNRQGRK-EAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSV 310
Query: 122 TILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++ G KGF Y+E+ D ++ Q A+
Sbjct: 311 RFPTDRDTGAFKGFGYVEYGDVETAQKAV 339
>gi|451995479|gb|EMD87947.1| hypothetical protein COCHEDRAFT_1159154 [Cochliobolus
heterostrophus C5]
Length = 523
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT ++ F GC V V I+ +K D PKGF Y+EF D ++ A+ +
Sbjct: 74 TAHLGNLSFDATEGDVTDFFAGC-EVTNVRIVEDKLDRKPKGFGYVEFGSVDGLKKALDL 132
Query: 153 DESLFRGRQIKVN----PKRTNRP---GISTTNRGGP 182
+ F+GR I+V+ PK +RP IS R GP
Sbjct: 133 SGTSFQGRNIRVSVAEPPK--DRPEARDISDWTRKGP 167
>gi|154309388|ref|XP_001554028.1| hypothetical protein BC1G_07588 [Botryotinia fuckeliana B05.10]
Length = 574
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++++GN+ + AT ++ F GC +N V I+ +K + PKGF Y EF + +++A+ +
Sbjct: 80 TVHLGNLSFDATVGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 138
Query: 153 DESLFRGRQIKVN----PK-RTNRPGI 174
+++ F+GR I+++ PK R +RP +
Sbjct: 139 NQTQFQGRNIRISVADPPKDRGDRPDV 165
>gi|401402664|ref|XP_003881304.1| hypothetical protein NCLIV_043390 [Neospora caninum Liverpool]
gi|325115716|emb|CBZ51271.1| hypothetical protein NCLIV_043390 [Neospora caninum Liverpool]
Length = 2053
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 63 VDKQMSMGSPPNSNNLLNLSIEEKKEA--DLRSIYVGNVDYGATAEELESHFHG-CGSVN 119
+ K + +PPN + E +KEA D +I+V N+ + E+L +HF C
Sbjct: 1811 MKKHRWILAPPNKETV-KREQEVRKEAPVDATTIFVKNLAFSVVEEDLANHFATLCNVTP 1869
Query: 120 RVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 179
T++C +G +GFA+++F + AM ++S GR + V+ R+ R + N
Sbjct: 1870 SQTVVCRDVNGKSRGFAFLKFDSEGDAMAAMLANDSTLNGRPMTVS--RSTRSITTPKNP 1927
Query: 180 GGPRGRGR 187
PRG GR
Sbjct: 1928 ARPRGAGR 1935
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
+EEK+ ++++ N+D T +L HF C V ++ + F KGFAY +F
Sbjct: 1617 VEEKQ-----TVWISNLDESVTEHDLLLHFQACPGFTGVRLVLD-FRRRSKGFAYADF 1668
>gi|67465896|ref|XP_649106.1| enhancer binding protein-2 [Entamoeba histolytica HM-1:IMSS]
gi|56465462|gb|EAL43716.1| enhancer binding protein-2, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704892|gb|EMD45051.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 229
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +Y+GN+ Y T E L++HF G + ++ F G+ +GFA++E+ ++ + A+
Sbjct: 1 MTKLYIGNLSYKTTEENLKTHFESFGKIKEAKLMI--FRGYSRGFAFVEYETEEDAKKAV 58
Query: 151 AMDESLFRGRQIKVN----PK-RTNRPGISTTNRGGPRG 184
A + F GR++KV PK R P GPRG
Sbjct: 59 AANGVEFEGRKLKVEIARPPKERKEVPEGEKKTTAGPRG 97
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y T E+L F G V RV I ++ G +GFA++E D + A++
Sbjct: 2 SIYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAIST 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 189
+D + + GR +KVN + P RG G GRGR
Sbjct: 62 LDGAEWMGRTLKVNKAKEREP------RGSFNGGGRGR 93
>gi|413918640|gb|AFW58572.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 390
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 46 VREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
V M ++++ L Q S + Q + G+ + N + + + D R+++V NV +G++
Sbjct: 176 VSMMTDKSKDLIQPSSMLQAQKASGAAGS-----NTTGQPEGGPDSRTVFVSNVHFGSSK 230
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
+ L HF+ G+V + I+ + G G AYIEF K+S + A+ ++ + F R +KV
Sbjct: 231 DALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKV 289
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y AT E+LE+ F GSV +V + ++ G +GF ++E + + A+A
Sbjct: 2 SIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIAD 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNR 179
+D + + GRQ+KVN R + NR
Sbjct: 62 LDGAEWMGRQLKVNKARPREAMGGSNNR 89
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y AT EEL S F G V V I+ ++ G +GFA++E D + Q A+A
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAE 61
Query: 152 MDESLFRGRQIKVNPKR 168
M+ +GR + VN R
Sbjct: 62 MNGKDLKGRNLVVNEAR 78
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ Y AT ++L F G V V I+ +K G +G A++E A+K+ A+
Sbjct: 2 NIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDG 61
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
++ + RGR+IKVN +P
Sbjct: 62 LNGTQIRGREIKVNEALPKKP 82
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVGN+ + T EEL F+GC + + +K G +G+A+++F+D S++TA+A+D
Sbjct: 263 IYVGNLSWDITEEELRKFFNGC-EITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALD 321
Query: 154 ESLFRGRQIKVN 165
+++ GR ++++
Sbjct: 322 QNVLFGRPVRIS 333
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVG + Y +T +++ S+F CG++ V + G +G A I F + + + A+A+D
Sbjct: 169 YVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDG 228
Query: 155 SLFRGRQIKVNPKRTNR 171
+ G +K+ P + R
Sbjct: 229 ADMGGLFLKIQPYKATR 245
>gi|50543140|ref|XP_499736.1| YALI0A03773p [Yarrowia lipolytica]
gi|49645601|emb|CAG83659.1| YALI0A03773p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 88 EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQ 147
+ D R ++VGN+ + AT E L+ HF CG + RV ++ + G KGF++++F D D+ +
Sbjct: 161 DTDSRVLFVGNLPFNATEEMLQDHFKSCGDIRRVRMMSFEDTGKSKGFSFVDFYDADATR 220
Query: 148 TAM 150
A+
Sbjct: 221 KAL 223
>gi|322378910|ref|ZP_08053326.1| putative RNA binding protein [Helicobacter suis HS1]
gi|321148652|gb|EFX43136.1| putative RNA binding protein [Helicobacter suis HS1]
Length = 82
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
L++IYVGN+ Y AT +++E F G VN V ++ ++ PKGF ++E D+ + +
Sbjct: 2 LKNIYVGNLVYSATNQDVEELFSQFGVVNSVKLIQDRETKRPKGFGFVEMEDEGAQKAIS 61
Query: 151 AMDESLFRGRQIKV---NPKR 168
++D + F GR I+V NP++
Sbjct: 62 SLDNTDFMGRTIRVTEANPRK 82
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 21 IENGDMEADQSKCTDEAELAAMKARVREMEEEAEKLKQLQSEVDKQM-SMGSPPNSNNLL 79
I N AD+S +++ ++K ++ ME E +L+++ K++ + +
Sbjct: 156 INNTAKPADKS-----SDINSLKKKLAMMERETSRLREMHKLRLKKLETKQRAQEERSKR 210
Query: 80 NLSIEEKK-EADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFD-GHPKGFAY 137
+ I+ ++ E D R+IYV N++ T ++L HF G++ R+ + + G +GF +
Sbjct: 211 DAEIQRRQDEEDARTIYVRNLNPKTTEQQLRDHFSVFGAIKRIVLPQDAHAIGSNRGFTF 270
Query: 138 IEFADKDSVQTAMAMDESLFRGRQIKVNPK 167
I FA K+ V+ A ++D +L R IKV PK
Sbjct: 271 ITFAGKEPVEVACSLDGTLLHERSIKVVPK 300
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y A +E HF CGSV V I+ + G +GF ++ F + D+V A
Sbjct: 305 DKRSVFVGNLPYKAEEPAVEEHFLDCGSVVAVRIVRDPRTGVGRGFGFVLFENTDAVHLA 364
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 365 LKLNNSELMGRKLRV 379
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK-DSVQTAMA 151
SIYVGN+ Y T E++E F G VNRV++ ++ G P+GFA++E A K D + A
Sbjct: 2 SIYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRPRGFAFVEMAAKEDEAKAIEA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + R ++VN
Sbjct: 62 LDGAEWMDRVMRVN 75
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + T + + R + RVSR M G
Sbjct: 339 LNE----------KPMKSQKQEDENTKKPTKKAR-KLRVSRCKNMKKG 375
>gi|413918635|gb|AFW58567.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 46 VREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
V M ++++ L Q S + Q + G+ + N + + + D R+++V NV +G++
Sbjct: 492 VSMMTDKSKDLIQPSSMLQAQKASGAAGS-----NTTGQPEGGPDSRTVFVSNVHFGSSK 546
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ L HF+ G+V + I+ + G G AYIEF K+S + A+ ++ + F R +KV
Sbjct: 547 DALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVV 606
Query: 166 PKR----TNRPGISTTNRGGP---------------RGRGRGRVS-RGAA 195
K T P + + G P G RGR+S RGAA
Sbjct: 607 RKSSTEVTQLPVLPRASWGSPFASRLIRTAYPRPNYPGAIRGRLSLRGAA 656
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
+YVGN+ Y AT E++ F G G V+ V ++ ++ G PKGFA++E +K+ A++ +
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISEL 62
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
++ +GR IKV+ R T GPR
Sbjct: 63 NDVDVKGRSIKVSVARP-----KTAQSSGPR 88
>gi|226494638|ref|NP_001148871.1| RNA recognition motif family protein [Zea mays]
gi|195622800|gb|ACG33230.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 46 VREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
V M ++++ L Q S + Q + G+ + N + + + D R+++V NV +G++
Sbjct: 492 VSMMTDKSKDLIQPSSMLQAQKASGAAGS-----NTTGQPEGGPDSRTVFVSNVHFGSSK 546
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ L HF+ G+V + I+ + G G AYIEF K+S + A+ ++ + F R +KV
Sbjct: 547 DALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVV 606
Query: 166 PKR----TNRPGISTTNRGGP---------------RGRGRGRVS-RGAA 195
K T P + + G P G RGR+S RGAA
Sbjct: 607 RKSSTEVTQLPVLPRASWGSPFASRLIRTAYPRPNYPGAIRGRLSLRGAA 656
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 84 EEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADK 143
E+ D R +++G + + AT ++++ F CG++ + + N D P GF ++ F D
Sbjct: 17 EDGAAGDKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNA-DSRPAGFGFLTFKDA 75
Query: 144 DSVQTAMAMDESLFRGRQIKV 164
DSV A+AMD GR +KV
Sbjct: 76 DSVAKAVAMDGQELMGRWVKV 96
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+I++GN+ + + + S F CG V V ++ G KGF +++FA+ + A+A
Sbjct: 126 TIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK 185
Query: 153 DESLFRGRQIKVNPKRTNRP 172
GR I+V+ +P
Sbjct: 186 GGEFVAGRAIRVDFAEDRKP 205
>gi|341894331|gb|EGT50266.1| hypothetical protein CAEBREN_14285 [Caenorhabditis brenneri]
Length = 144
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF 140
S E+ E D R+I V N+D AT ++L F G + V ++ + PKGFA++EF
Sbjct: 11 FSKEQIDEMDTRTIVVTNLDTTATEDDLRKLFDFAGPIKNVEVVFDTRTLMPKGFAFVEF 70
Query: 141 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
SV+ A+ ++++F+ R+I V K+ ++
Sbjct: 71 EILLSVEVALIYNQTVFKNRRIGVKEKKASK 101
>gi|242279034|ref|YP_002991163.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242121928|gb|ACS79624.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
++IYVGN+ + AT E++ + F G V V ++ ++ G P+GF ++E D ++ A
Sbjct: 3 KNIYVGNLPWSATEEDVRASFEAYGEVVSVKLIEDRETGRPRGFGFVEMDDNGAIDAIEA 62
Query: 152 MDESLFRGRQIKVNPKR 168
+D F GR +KVN R
Sbjct: 63 LDGKDFGGRNLKVNEAR 79
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 290 RSIFVGNLDFEEIEESLWKHFESCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 349
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + + + + R + RVSR M G
Sbjct: 350 LNE----------KPMKSQKQEAEDSKKPAKKAR-KLRVSRCKNMKKG 386
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + T + + R + RVSR M G
Sbjct: 339 LNE----------KPMKSQKQEDENTKKPTKKAR-KLRVSRCKNMKKG 375
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + T + + R + RVSR M G
Sbjct: 339 LNE----------KPMKSQKQEDENTKKPTKKAR-KLRVSRCKNMKKG 375
>gi|407923317|gb|EKG16390.1| hypothetical protein MPH_06359 [Macrophomina phaseolina MS6]
Length = 509
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K D PKGF Y+EF D ++ A+A+
Sbjct: 82 TAHLGNLSFDATEGDIQDFFMEC-EVTNVRIVEDKLDHKPKGFGYVEFGSVDGLKKALAL 140
Query: 153 DESLFRGRQIKVN 165
+ F+GR I+V+
Sbjct: 141 SGTQFQGRNIRVS 153
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + T + + R + RVSR M G
Sbjct: 339 LNE----------KPMKSQKQEDENTKKPTKKAR-KLRVSRCKNMKKG 375
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS+++GN+ Y + + + HF CG V V I+ ++ G KGF Y+ F + D+V A+
Sbjct: 104 RSVFLGNLSYDISNDAVREHFAVCGEVVAVRIVRDRKTGLGKGFGYVLFENTDAVHLALK 163
Query: 152 MDESLFRGRQIKV 164
+++S+ GR+I+V
Sbjct: 164 LNDSVLLGRKIRV 176
>gi|406608094|emb|CCH40528.1| Nucleolar protein 12 [Wickerhamomyces ciferrii]
Length = 458
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R+I+VGN+D+ EEL + F CG + V I+ + KGF Y++F D SV A+
Sbjct: 277 RTIFVGNLDFEEKEEELWNIFSECGEIESVRIVRDSTTNMGKGFGYVQFKDFTSVSKALL 336
Query: 152 MDESLFRGRQIKVNPKRTNR----PGISTTNRGGP 182
M+E ++ K+ R+ R P RGGP
Sbjct: 337 MNEKKLGEKKRKLRISRSKRVKPTPQQGQNGRGGP 371
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 199
++E P ++ + T + + R + RVSR M G
Sbjct: 339 LNE----------KPMKSQKQEDENTKKPTKKAR-KLRVSRCKNMKKG 375
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
IYVGN+ Y T E+L + F G ++ +++ +KF G+ KGF ++E ++ A+ +
Sbjct: 3 IYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFVEMSNNAEADAAIKGL 62
Query: 153 DESLFRGRQIKVNPKRTNRP 172
+E+ +GR +KVN + P
Sbjct: 63 NETPLKGRNMKVNEAKPRSP 82
>gi|357129961|ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 38 ELAAMKARVREMEEEAEKLKQLQSEVDKQMS--MGSPPNSNNLLNLSIEEKKEADLRSIY 95
E+AA V E E+ + +++ + +K S G S+N + + E +E ++ +Y
Sbjct: 139 EVAAADPAVSEDSEQILNITKVEGDENKNKSEVTGQGVGSDNPI---VSEDREQSIKKVY 195
Query: 96 VGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDES 155
VG + Y ++ +++ S F GCGS+ + + G +G A + F + Q A+A+D +
Sbjct: 196 VGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDAAAQRALALDGA 255
Query: 156 LFRGRQIKVNPKRTNR 171
G +KV P + NR
Sbjct: 256 DMGGFFLKVQPYKANR 271
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVGN+ + T +L F C ++ + +K G KGFA+++F+D S+ AM +D
Sbjct: 294 IYVGNLAWDITEVDLRKFFSDC-KISSIRFGTDKETGDFKGFAHVDFSDGTSLAVAMKLD 352
Query: 154 ESLFRGRQIKV 164
+++ +GR +++
Sbjct: 353 QNVIKGRPVRI 363
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYI 138
++++ KK RS++VGN+ + E + +HF G+V V ++ +K G KGF Y+
Sbjct: 241 VDIAGNNKKHDMKRSLFVGNLAFNIDDEAVRNHFEEFGTVEGVRLIRDKATGVGKGFGYV 300
Query: 139 EFADKDSVQTAMAMDESLFRGRQIKV 164
F D SVQ A+ MD + GR ++V
Sbjct: 301 LFEDSSSVQFALKMDGTKLNGRPLRV 326
>gi|361124588|gb|EHK96669.1| putative RNA-binding protein sce3 [Glarea lozoyensis 74030]
Length = 549
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++++GN+ + AT ++ F GC +N V I+ +K + PKGF Y EF + +++A+ +
Sbjct: 58 TVHLGNLSFDATVGDVTDFFTGCECIN-VRIIEDKMEMKPKGFGYAEFQTLEGLKSALTL 116
Query: 153 DESLFRGRQIKVN 165
+++ F+GR I+++
Sbjct: 117 NQTQFQGRNIRIS 129
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 81 LSIEEKKEADLRS-IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIE 139
LS EE+++AD+ I++G + + T + L++HF G++N V ++ NK G P+GF +++
Sbjct: 49 LSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQ 108
Query: 140 FADKDSVQTAMAMDESLFRGRQIKV 164
F + S A+ +E + GR I V
Sbjct: 109 FQESTSADAAL-KEEHVIDGRTIDV 132
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
I+VG +D + +F G V ++ +K G +GF +I + D V+ M+
Sbjct: 177 IFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGG 236
Query: 154 ESLFRGRQIKVNPKRTNRPGISTTNRGGPR 183
+G+ ++V +T P R GPR
Sbjct: 237 THELKGKSVEV---KTAAP------RDGPR 257
>gi|413918637|gb|AFW58569.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 588
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 46 VREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
V M ++++ L Q S + Q + G+ + N + + + D R+++V NV +G++
Sbjct: 374 VSMMTDKSKDLIQPSSMLQAQKASGAAGS-----NTTGQPEGGPDSRTVFVSNVHFGSSK 428
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ L HF+ G+V + I+ + G G AYIEF K+S + A+ ++ + F R +KV
Sbjct: 429 DALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVV 488
Query: 166 PKR----TNRPGISTTNRGGP---------------RGRGRGRVS-RGAA 195
K T P + + G P G RGR+S RGAA
Sbjct: 489 RKSSTEVTQLPVLPRASWGSPFASRLIRTAYPRPNYPGAIRGRLSLRGAA 538
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D +SV A+
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 152 MDESLFRGRQ 161
++E + ++
Sbjct: 340 LNEKPMKSQK 349
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S++VGNV +GA E+L F CG ++ + I+ + G KGFAY++F D SV A
Sbjct: 87 SVFVGNVPFGADEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACKK 146
Query: 153 DESL-FRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
+E + GR+++V R+++ T G + +V R + ++P
Sbjct: 147 NERIEVEGRKLRVFRCRSDKSKFQTKF-----GGAKSQVGRNKKLLKSFQP 192
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D +SV A+
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 152 MDESLFRGRQ 161
++E + ++
Sbjct: 340 LNEKPMKSQK 349
>gi|333977917|ref|YP_004515862.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821398|gb|AEG14061.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 85
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+R++YVGN+ + AE+LE F G + ++ ++ G +GF ++E ADKD+
Sbjct: 2 VRTLYVGNLPWATRAEDLEEAFSRYGEIISARVITDRQTGRSRGFGFVEVADKDADAIIA 61
Query: 151 AMDESLFRGRQIKVNPKR 168
A++ + F GR I VN R
Sbjct: 62 ALNGTEFNGRVITVNEAR 79
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA-DKDSVQTAMA 151
SIY+GN+ Y T ++L F G+V RV I ++ P+GFA++E + D++ + A
Sbjct: 2 SIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GRQ+KVN R
Sbjct: 62 LDGADWMGRQLKVNKAR 78
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T ++L F G+V RV + ++ G P+GF ++E + ++ Q A+ A
Sbjct: 2 SIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GR IKVN
Sbjct: 62 LDGAEWMGRDIKVN 75
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T ++L S F G+V RV + ++ G P+GFA++E +D A+ A
Sbjct: 2 SIYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GR +KVN
Sbjct: 62 LDGAEWMGRDLKVN 75
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
SI+VGN+ + + + HF CG V V I+ + G KGF Y+ F D SV A+ +
Sbjct: 389 SIFVGNLPFDVEDDSVYEHFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRL 448
Query: 153 DESLFRGRQIKV 164
+E F GR+I+V
Sbjct: 449 NEKTFSGRKIRV 460
>gi|46111387|ref|XP_382751.1| hypothetical protein FG02575.1 [Gibberella zeae PH-1]
Length = 554
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y T + + GCG VN V ++ ++ PKGF Y+EF D ++ A+A+
Sbjct: 85 TAHLGNLAYDVTNDAVADFLTGCGVVN-VRLIEDRELQRPKGFGYVEFETLDGLKQALAL 143
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D F GR IK+ ++ RGG GRG
Sbjct: 144 DGESFGGRMIKIK--------VADPPRGGDPGRG 169
>gi|408391819|gb|EKJ71187.1| hypothetical protein FPSE_08693 [Fusarium pseudograminearum CS3096]
Length = 558
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y T + + GCG VN V ++ ++ PKGF Y+EF D ++ A+A+
Sbjct: 83 TAHLGNLAYDVTNDAVADFLTGCGVVN-VRLIEDRELQRPKGFGYVEFETLDGLKQALAL 141
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 186
D F GR IK+ ++ RGG GRG
Sbjct: 142 DGESFGGRMIKIK--------VADPPRGGDPGRG 167
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T +LE F G+V RV +L ++ G P+GF ++E + ++A+ A
Sbjct: 2 SIYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR ++VN R
Sbjct: 62 LDGAEWMGRALRVNKAR 78
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L+S F G+V++V + +K G P+GF +++ + + A+ A
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDA 61
Query: 152 MDESLFRGRQIKVNPKR 168
++ + + GRQ+KVN R
Sbjct: 62 LNGAEWMGRQLKVNKAR 78
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 61 SEVDKQMSMGSPPNSNNLLNLSIEEKKEADL--------RS---IYVGNVDYGATAEELE 109
S + ++S +P +++ EE++E D+ RS ++V N+ Y + E+LE
Sbjct: 264 SRAETRLSTPAPEPRSSIPTPPAEEEREDDVPDKDIEAVRSTMRLFVRNLSYDVSYEDLE 323
Query: 110 SHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVNPKR 168
+ F G++ ++ I +K G KGFAY+++ D DS + A+ D F+GR I + P
Sbjct: 324 AEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAEKALVDRDGRTFQGRLIHILPAT 383
Query: 169 TNR 171
R
Sbjct: 384 AKR 386
>gi|440297375|gb|ELP90069.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 283
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +YV N+ Y +LE F G++ ++ ++ G+ KGF ++E+ +D + A+
Sbjct: 1 MSKLYVCNLSYSTKESDLEKFFASFGNIKSCKLMISR--GYSKGFGFVEYETEDDAKKAL 58
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAA--MYGGYR 201
A +E+ F GR+++++ R R + +G G R R A YGGYR
Sbjct: 59 AANETEFMGRKLRIDIARPPRERHESAQQGSQEGDNERRDERSGAPRRYGGYR 111
>gi|19115130|ref|NP_594218.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe
972h-]
gi|17367899|sp|O13741.1|NOP12_SCHPO RecName: Full=Nucleolar protein 12
gi|2462671|emb|CAB11047.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe]
Length = 438
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R ++VGN+ + A E L +F CGS++ V I+ + KGFAYI+F D V A+
Sbjct: 270 RCVFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALL 329
Query: 152 MDE-SLFRGRQIKVNPKRTNRP-GISTTNRGGPRGR---GRGRVSRGAA 195
++E + GR +++ ++ +P I+ + RG + R GR R G A
Sbjct: 330 LNEKKMPEGRTLRIMRAKSTKPKSITRSKRGDEKTRTLQGRARKLIGKA 378
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-- 150
SIYVGN+ Y T ++L S F G+V RV + ++ G P+GF ++E D D+ +TA
Sbjct: 2 SIYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEM-DTDAEETAAIE 60
Query: 151 AMDESLFRGRQIKVN---PKRTNR 171
A+D + + GR +KVN P+ N+
Sbjct: 61 ALDGAEWMGRDLKVNKAKPREDNK 84
>gi|386749770|ref|YP_006222977.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
gi|384556013|gb|AFI04347.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
Length = 82
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+++IYVGN+ Y AT EE++ F G V V ++C++ PKGF ++E + Q
Sbjct: 1 MKNIYVGNLVYSATNEEVKELFSKFGEVFSVKLICDRETKRPKGFGFVEMQGDSANQAIS 60
Query: 151 AMDESLFRGRQIKV---NPKRT 169
+D + F GR I+V NP+++
Sbjct: 61 ELDNTDFMGRTIRVTEANPRKS 82
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
IY+GN+DY T +L F G V+ +++ +KF G KGF ++E A+ +A+A +
Sbjct: 3 IYIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADL 62
Query: 153 DESLFRGRQIKVN--PKRTNRPG 173
++S GR IKVN R RP
Sbjct: 63 NDSDLNGRTIKVNEAKPREERPA 85
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS+++GN+ Y + + HF CG V V I+ ++ G KGF Y+ F + D+V A+
Sbjct: 265 RSVFLGNLAYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALK 324
Query: 152 MDESLFRGRQIKVN--PKRTNRPGISTTNRGGPRG 184
++ S GR+++V ++ P +TT R PRG
Sbjct: 325 LNNSDLMGRKLRVKRCVEKGRAPQRNTTTR--PRG 357
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
++VGN+ Y AT ++L HF G G V V I+C++ G +GFA++ F+ + A+ +
Sbjct: 6 VFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENL 65
Query: 153 DESLFRGRQIKVNPKRTNR 171
+ES GR + V ++ R
Sbjct: 66 NESDVAGRNVSVRQAQSKR 84
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
++IYVGN+ + AT E++ + F G V V ++ ++ G P+GF ++E D+ ++ +
Sbjct: 3 KNIYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEMDDQGALAAIES 62
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
+D S F GR +KVN R RP
Sbjct: 63 LDGSDFGGRNLKVNEARP-RP 82
>gi|340056502|emb|CCC50835.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 429
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 93 SIYVGNVDYGATAEELESHF--HGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
S+++GN+DYG E + + F G V RV ++ ++ G KGF Y+EF SV A+
Sbjct: 248 SVFIGNIDYGTNEESVRNFFVEKGLDDVRRVRLIRDRETGVCKGFGYVEFGSSSSVPKAV 307
Query: 151 AMDESLFRGRQIKV 164
+ S+F GR+I++
Sbjct: 308 GLRGSIFSGREIRI 321
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
++V N+ Y AT +ELE F G+V++V ++ NK KG AY+ F +S A+ +
Sbjct: 231 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 290
Query: 153 DESLFRGRQIKVNPKRTNRPG 173
D S+F+GR + V P R +P
Sbjct: 291 DNSIFQGRLLHVMPAREKKPS 311
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
+ V NV + AT ++L F G + + L KF H +GFA++EF K Q A+ A+
Sbjct: 648 LIVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKFGSH-RGFAFVEFVTKQEAQNALQAL 705
Query: 153 DESLFRGRQI 162
+ GR +
Sbjct: 706 SSTHLYGRHL 715
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA-DKDSVQTAMA 151
SIYVGN+ Y T ++L++ F G + RV + ++ G P+GFA++E +K+ +A
Sbjct: 2 SIYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVA 61
Query: 152 MDESLFRGRQIKVN 165
+DE+ + GR +KVN
Sbjct: 62 LDEAEWMGRALKVN 75
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D RS++VGN+ Y +E HF CG++ V I+ + G +GF Y+ F + D+V A
Sbjct: 1600 DKRSVFVGNLPYKIEDAVVEDHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLA 1659
Query: 150 MAMDESLFRGRQIKV 164
+ ++ S GR+++V
Sbjct: 1660 LKLNNSELMGRKLRV 1674
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN + +T +E+ F G+V V I+ ++ G P+GFA++E++D+ S Q A+
Sbjct: 6 SVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNE 65
Query: 152 MDESLFRGRQIKVN 165
++ + F GRQ++VN
Sbjct: 66 LNGADFNGRQLRVN 79
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+S+++GN+ + + + +HF CG + V I+ + G KGF Y+ F +D+V A+
Sbjct: 445 KSVFIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE 504
Query: 152 MDESLFRGRQIKVNP 166
+D + R+I+V P
Sbjct: 505 LDGTTILNREIRVKP 519
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 22/103 (21%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN----------------RVTILC 125
S+E+ KE + R+I+VGN+ T ++L+ F G ++ RV +
Sbjct: 333 SLEDFKENE-RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAIT 391
Query: 126 NKFDGHPK---GFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
N+ HPK +AYI F ++S + A++++ F G I+V+
Sbjct: 392 NEL--HPKMKSVYAYIRFESEESTKKALSVNGRKFEGNYIRVD 432
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ AT ++L F G V I K +G KGF ++ F K+S + ++A
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARI-PRKANGASKGFGFVVFQTKESAEASLA 1019
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRGRG 188
M+E LFR R + V+ P R + +R G GR +
Sbjct: 1020 MNEQLFRSRPLHVHISTPTVAKRQAATIISRVGAGGRSKS 1059
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS++VGN+ Y + + HF CG + V ++ ++ G KGF Y+ F + D+V A+
Sbjct: 276 RSVFVGNLSYDIRDDAVREHFQVCGDIVGVRVVRDRRTGLGKGFGYVLFENTDAVHLALK 335
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRG 186
++ S+ GR+I+V KR + + ++ P+GRG
Sbjct: 336 LNNSVLMGRKIRVQHIEDKRKEQKSLGQSH--APKGRG 371
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVGN+ + T E+LE+ F GSV+ +L ++ G +GF ++ D+D+ + A+D
Sbjct: 3 MYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFVTMGDEDAKKAIDALD 62
Query: 154 ESLFRGRQIKVNPKRTNRP 172
S F GR ++VN + P
Sbjct: 63 GSDFEGRPLRVNEAQERAP 81
>gi|443324398|ref|ZP_21053165.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442795980|gb|ELS05312.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 90
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+DY E+LE F G V RV + ++ G +GFA++E + KD A+ A
Sbjct: 2 SIYVGNLDYSLEKEDLEEVFSEYGKVTRVHLPTDRESGRKRGFAFVEMSSKDEENAAISA 61
Query: 152 MDESLFRGRQIKVN--PKRTNRPG 173
+D + + R +KVN R NR G
Sbjct: 62 LDGAEWMERTLKVNEAKPRENRSG 85
>gi|240274320|gb|EER37837.1| pre-mRNA splicing factor [Ajellomyces capsulatus H143]
Length = 1334
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ AT ++L F G V I K +G KGF ++ F K+S + ++A
Sbjct: 986 REIHVSNLDWKATEDDLVELFAAYGQVEAARI-PRKANGASKGFGFVVFQTKESAEASLA 1044
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRGRG 188
M+E LFR R + V+ P R + +R G GR +
Sbjct: 1045 MNEQLFRSRPLHVHISTPTVAKRQAATIISRVGAGGRSKS 1084
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN+ Y T E+L S F G+V +V+I ++ G P+GFA++E Q A+
Sbjct: 2 SVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIEK 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
+D + + GR +KVN R S+ +GG
Sbjct: 62 LDGAEWMGRDLKVNKARPREDRGSSFGQGG 91
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ AT ++L F G V I K +G KGF ++ F K+S + ++A
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARI-PRKANGASKGFGFVVFQTKESAEASLA 1019
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRGRG 188
M+E LFR R + V+ P R + +R G GR +
Sbjct: 1020 MNEQLFRSRPLHVHISTPTVAKRQAATIISRVGAGGRSKS 1059
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+YVGN+ Y T + + +HF G V V I+ ++ G PKGF + EF+D+ Q A+
Sbjct: 19 SVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNT 78
Query: 152 MDESLFRGRQIKVNPKRTN 170
++ + F GR ++VN N
Sbjct: 79 LNGTDFNGRSLRVNWANKN 97
>gi|288940038|ref|YP_003442278.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288895410|gb|ADC61246.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 91
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y T +EL F G ++ V ++ +KF G KGF ++E + A+
Sbjct: 2 NIYVGNLAYSVTQDELRDAFGAYGEISSVNLITDKFTGSSKGFGFVEMPNNSEADAAIKG 61
Query: 152 MDESLFRGRQIKVN 165
++E+ +GR +KVN
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM- 150
RSI+VGN+ Y A E++ F GSV V I+ ++ G P+GF + EF +D+ + A+
Sbjct: 3 RSIFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAVG 62
Query: 151 AMDESLFRGRQIKVN 165
+M+ + F GRQI+V+
Sbjct: 63 SMNNADFMGRQIRVD 77
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-M 152
IYVGN+ Y T EEL+ F G ++ V ++ +K+ G KGFA++E + +TA+ +
Sbjct: 3 IYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKEL 62
Query: 153 DESLFRGRQIKVNPKR 168
+ +G IKVN R
Sbjct: 63 NGKTIKGMSIKVNQAR 78
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
S+YVGN + T ++L ++F G+V+ V I+C++ G P+GFA++EF ++ + Q A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 153 DESL-FRGRQIKVN 165
+ F GR ++VN
Sbjct: 65 FNGVDFNGRALRVN 78
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+ Y AT +L+S F G V RV + ++ G +GFA++E + A++
Sbjct: 2 TIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAISE 61
Query: 152 MDESLFRGRQIKVN---PKRTNRP 172
+D + + GRQ++VN PK NRP
Sbjct: 62 LDGAEWMGRQLRVNKAKPKEENRP 85
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
++IYVGN+ + AT +E+ + F G V V ++ ++ G P+GF ++E D +++
Sbjct: 3 KNIYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDAGALEAIEN 62
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
+D F GR IKVN R RP
Sbjct: 63 LDGKDFGGRNIKVNEAKPRAERP 85
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 77 NLLNL-SIEEKKEADLRS-IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
NLL + S K++ + R+ ++VGN+ Y + EL +HF G+V+ V I+ + G+ KG
Sbjct: 213 NLLRVDSCCAKRKYNCRTTVFVGNLPYDVSENELIAHFEMSGNVSFVRIVRDSRTGNSKG 272
Query: 135 FAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNR 171
FA++ F D +V A+ +D S+F+ R P RT R
Sbjct: 273 FAFVAFKDSAAVPLALQLDGSIFKRR-----PLRTKR 304
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+DY T ++L F G+V RV + ++ G +GF ++E A + A++
Sbjct: 2 SIYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISE 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR++KVNP R
Sbjct: 62 LDGAEWMGRELKVNPAR 78
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y E+LE F GSV RV I ++ G +GFA++E D Q A++
Sbjct: 2 SIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAIST 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
+D + + GR +KVN + P RG G GR
Sbjct: 62 LDGAEWMGRTLKVNKAKEREP------RGSFNGGGR 91
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 22 ENGDMEADQSKCTDEAELAAMKARVREMEEEAEKL---KQLQSEVDKQMSMGSPPNSNNL 78
ENG + S L+ +RV + +++L K ++ VD + S+G P
Sbjct: 72 ENGTPSEESSFAISSGSLSGDSSRVNATQTTSDELDSAKATETPVDSR-SVGQP------ 124
Query: 79 LNLSIEEKKE----ADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKG 134
SI K A +IYVGN+ + TA +L++ F CG V V +L + + G KG
Sbjct: 125 -RFSIRRPKPDGYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSKG 182
Query: 135 FAYIEFADKDSVQTAMA-MDESLFRGRQIKVN 165
F Y++F D ++ + A+A M LF GR + VN
Sbjct: 183 FGYVKFHDVETAEKAVALMHGQLFEGRHLAVN 214
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R++Y+GN+ + T +L F ++ V + ++ G +GF + +F D +S + A
Sbjct: 234 RTLYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFT 293
Query: 152 -MDESLFRGRQIKVNPKRTN 170
+ GR ++++ +N
Sbjct: 294 LLSTKTPYGRPLRIDYSHSN 313
>gi|326531612|dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 740
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 46 VREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATA 105
V ++E EAEK+K + + K G S+N + + + E ++ +YVG + Y ++
Sbjct: 231 VTKVEGEAEKIKSEEVKEIKLEEAGQAGVSDNPI---VPQDSEQSMKKVYVGGIPYYSSE 287
Query: 106 EELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+++ S F GCGS+ + + G +G A + F + + A+A+D + G +KV
Sbjct: 288 DDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFKTDAAAKRALALDGADMGGFLLKVQ 347
Query: 166 PKRTNR 171
P + NR
Sbjct: 348 PYKANR 353
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 95 YVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDE 154
YVGN+ + T ++L F C ++ + +K G KGFA+++F+D S+ A+ +D+
Sbjct: 377 YVGNLAWDVTEDDLRKFFSDC-KISSIRFGKDKETGEFKGFAHVDFSDSTSLAIALKLDQ 435
Query: 155 SLFRGRQIKVN---PKRTNR 171
++ +GR ++ PK+ N+
Sbjct: 436 NVIKGRPARIRCAVPKKENQ 455
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
++V N+ Y AT +ELE F G+V++V ++ NK KG AY+ F +S A+ +
Sbjct: 447 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 506
Query: 153 DESLFRGRQIKVNPKRTNRP 172
D S+F+GR + V P R +P
Sbjct: 507 DNSIFQGRLLHVMPAREKKP 526
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
+ V NV + AT ++L F G + + L KF H +GFA++EF K Q A+ A+
Sbjct: 864 LIVRNVAFEATEKDLRQLFSPFGQIKSLR-LPMKFGSH-RGFAFVEFVTKQEAQNALQAL 921
Query: 153 DESLFRGRQI 162
+ GR +
Sbjct: 922 SSTHLYGRHL 931
>gi|358399302|gb|EHK48645.1| hypothetical protein TRIATDRAFT_281461 [Trichoderma atroviride IMI
206040]
Length = 580
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT+E + F GC V+ V I+ ++ PKGF Y+EF + + ++ A+ +
Sbjct: 80 TAHLGNLSYDATSESVSGFFEGCDVVS-VRIIEDRELQRPKGFGYVEFGNVEGLKKALDL 138
Query: 153 DESLFRGRQIKV 164
D F GR IK+
Sbjct: 139 DGESFEGRMIKI 150
>gi|167376798|ref|XP_001734154.1| 29 kDa ribonucleoprotein B, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165904519|gb|EDR29735.1| 29 kDa ribonucleoprotein B, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 229
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +Y+GN+ Y T E L++HF G + ++ F G+ +GFA++E+ ++ + A+
Sbjct: 1 MTKLYIGNLSYKTTEENLKTHFESFGKIKEAKLMV--FRGYSRGFAFVEYETEEDAKKAV 58
Query: 151 AMDESLFRGRQIKVNPKRTNRPGISTT-----NRGGPRG 184
A + F GR++KV R + + T GPRG
Sbjct: 59 AANGVEFEGRKLKVEIARPPKERKAVTEGEKKTTTGPRG 97
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-- 150
S+Y+GN+ Y + E+L+S F G+V RV I ++ G P+GFA++E D DS + A
Sbjct: 2 SVYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEM-DSDSEEEAAIE 60
Query: 151 AMDESLFRGRQIKVN 165
A+D + + GR +KVN
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|390331853|ref|XP_785806.3| PREDICTED: uncharacterized RNA-binding protein C365.04c-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
++VG + Y AT E++ HF G + V + +K G +GF YIEF + S +AM
Sbjct: 72 LFVGQIPYSATTEDVTKHFSTAGELKSVRLATHKDTGKSRGFGYIEFKNNKSYMRGLAMH 131
Query: 154 ESLFRGRQIKV 164
S+ GR I V
Sbjct: 132 LSMLHGRPINV 142
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF-ADKDSVQTAMA 151
SIYVGN+ Y T E+LE F G V+RV++ ++ G P+GFA+++ A+ + + A
Sbjct: 2 SIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIEA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR ++VN R
Sbjct: 62 LDGAEWMGRDMRVNKAR 78
>gi|429856471|gb|ELA31378.1| RNA recognition motif containing protein, partial [Colletotrichum
gloeosporioides Nara gc5]
Length = 153
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC VN V I+ ++ PKGFAY EF D + ++ A+ +
Sbjct: 78 TAHLGNLSYDATVETVTEFFEGCNIVN-VRIIEDREQQRPKGFAYAEFQDLEGLKQALTL 136
Query: 153 DESLFRGRQIKV 164
D F+GR I++
Sbjct: 137 DGQSFQGRVIRI 148
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y E+LE F GSV RV I ++ G +GFA++E D Q A++
Sbjct: 2 SIYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAIST 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 187
+D + + GR +KVN + P RG G GR
Sbjct: 62 LDGAEWMGRTLKVNKAKEREP------RGSFNGGGR 91
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ YG T EEL F G V ++ ++ G KGFA++E ++ A+
Sbjct: 2 NIYVGNLAYGVTEEELREAFSSFGEVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAIKG 61
Query: 152 MDESLFRGRQIKVNPKR 168
++++ +GR IKVN +
Sbjct: 62 LNDTALKGRNIKVNQAK 78
>gi|119482153|ref|XP_001261105.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
gi|119409259|gb|EAW19208.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
Length = 512
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ +VGN+ + AT+ ++ F GCG N V I+ +K PKGF Y+EF D ++ A+ +
Sbjct: 87 TAHVGNLSFEATSADINDLFAGCGVTN-VRIVEDKLTRTPKGFGYVEFETVDGLKKALDL 145
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 146 SGTTLQGRAIRVS 158
>gi|344345229|ref|ZP_08776084.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343803180|gb|EGV21091.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
IYVGN+ Y T +EL F G G + ++ +KF G KGF +++ + TA+ A+
Sbjct: 3 IYVGNLPYSVTDDELRDIFSGFGELASAEVIKDKFSGQSKGFGFVDMPNNSEADTAIKAL 62
Query: 153 DESLFRGRQIKVNP--KRTNRPGISTTNRGGPR 183
+ES +GR++ VN R RP RGG R
Sbjct: 63 NESDMKGRKLTVNEARPRAERP------RGGGR 89
>gi|428218969|ref|YP_007103434.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427990751|gb|AFY71006.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 88
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+ Y AT +++E F+ GSV RV ++ ++ G +GF +++ +D+D A+
Sbjct: 2 TIYIGNLSYQATQQDVEEIFNDYGSVKRVQLITDRETGRMRGFGFVDMSDEDEEDNAIEN 61
Query: 152 MDESLFRGRQIKVNPK--RTNRPGI 174
++ + + GR +KVN R NR G
Sbjct: 62 LNGATWMGRALKVNKARPRENRSGF 86
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ +VGN+ + AT+ ++ F GCG N V I+ +K PKGF Y+EF D ++ A+ +
Sbjct: 72 TAHVGNLSFEATSADINDLFAGCGVTN-VRIVEDKLTRSPKGFGYVEFETVDGLRRALDL 130
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 131 SGTTLQGRAIRVS 143
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-- 150
SIYVGN+ Y T E+L+ F G V+RV + ++ G P+GFA++E + +S +TA
Sbjct: 2 SIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEM-ETESQETAAIE 60
Query: 151 AMDESLFRGRQIKVN 165
A+D + + GR +KVN
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y T ++L F G ++ V I+ ++ G KGF ++E +D + A+
Sbjct: 2 NIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQK 61
Query: 152 MDESLFRGRQIKVN--------PKRTNRP 172
++ES +GR +KVN PKR RP
Sbjct: 62 LNESNLKGRNMKVNEARPREEKPKRNFRP 90
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM- 150
RS+Y+GN+ Y T EL F +V V + ++ G+P+GFA+ +F D S Q A+
Sbjct: 201 RSLYIGNLAYDLTDRELNELFKSVRNVIEVRVAVDRQTGNPRGFAHADFLDTPSAQAALE 260
Query: 151 AMDESLFRGRQIKV----NPKRTNR 171
+ GR++KV NPKRT R
Sbjct: 261 ILSSKAPHGRRLKVDFSQNPKRTQR 285
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ + TAE+L+S G V + I+ + G KGF Y+ F ++ Q A+
Sbjct: 111 TIYIGNLFFDITAEDLKSKMESFGVVEKAAIISDA-RGLSKGFGYVTFDSVEAAQRAIEE 169
Query: 152 MDESLFRGRQIKVN-----PKRTNRP 172
M++ ++ GR++ V P+ RP
Sbjct: 170 MNQQVYEGRRVLVQFSAAGPREKFRP 195
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
PP + N+ I+E + R+IYVGN+ A+++ + F CG + V + + +
Sbjct: 95 PPITGNVDPSKIDEIR----RTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGD--ETQ 148
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
P FA++EFA+ +SVQ A+ + ++F R IKVN
Sbjct: 149 PTRFAFVEFANPESVQVALQYNGAMFGDRPIKVN 182
>gi|307190796|gb|EFN74665.1| RNA-binding protein 34 [Camponotus floridanus]
Length = 433
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+++++ N+ YG + HF CG + V ++ +K G KGF YI F D+++V A+
Sbjct: 256 KAVFIANLRYGTDNNTIWKHFGICGDIESVHLVRDKETGQTKGFGYINFIDENAVLCALE 315
Query: 152 MDESLFRGRQIKVNPKRTN 170
+D + R ++V P + N
Sbjct: 316 LDGTEIMNRPVRVEPYKIN 334
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 33/124 (26%)
Query: 72 PPNSNNL------------LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN 119
PPNS ++ L++E +++ D ++I++ N+ E++ F G +N
Sbjct: 119 PPNSKDIRKGQKQVKEEIKYQLTVERQEDIDKKTIFIDNIPKDTKEAEIKKVFSKFGPIN 178
Query: 120 ----------------RVTILCNKFDGHPKG---FAYIEFADKDSVQTAMAMDESLFRGR 160
+V + + HPK YI + K+S Q A++M+ +F+G
Sbjct: 179 NLRFRNIVPQNLKMSKKVAAITKQI--HPKVTTVVVYINYKSKESAQKALSMNGKIFQGN 236
Query: 161 QIKV 164
I V
Sbjct: 237 YIHV 240
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 152 MDESLFRGRQIK 163
++E + ++ +
Sbjct: 339 LNEKPMKSQKTR 350
>gi|154270706|ref|XP_001536207.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409781|gb|EDN05221.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1384
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ AT ++L F G V I K +G KGF ++ F K+S + ++A
Sbjct: 1036 REIHVSNLDWKATEDDLVELFAAYGQVEAARI-PRKANGASKGFGFVVFQAKESAEASLA 1094
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPRGRGRG 188
M+E LFR R + V+ P R + +R G GR +
Sbjct: 1095 MNEQLFRSRPLHVHISTPTAAKRQAATILSRVGAGGRSKS 1134
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++Y+GN+ Y AT +L F G++ R+ + ++ G +GFA++E AD+ Q A+A+
Sbjct: 2 TLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADE--TQEAVAI 59
Query: 153 DE---SLFRGRQIKVNPKRTNRPG 173
D+ + + GR +KVN + +PG
Sbjct: 60 DDLDGATWLGRVLKVNKAKPKQPG 83
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++++V V Y AT ++L+ F G V RV ++ K G P+G+A++EF K+ ++TA
Sbjct: 152 FKTLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAY 211
Query: 151 AM-DESLFRGRQIKVN 165
M D GR++ V+
Sbjct: 212 KMADGRKIEGRRVVVD 227
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V NV++ A+ ++L+ F G+V V L K DG KGF Y+ F+ K+ A+A
Sbjct: 996 REIHVSNVNWSASEDDLKELFSRFGTVELVR-LPRKVDGGSKGFGYVVFSSKEEATAALA 1054
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGG 181
M E FRGR + V P+ R + R G
Sbjct: 1055 MHEQEFRGRPLHVKVSAPQGAKRIAATVVTRVG 1087
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++ V N+ G T ++ F CG++N V ++ + DG + A IEF +D A
Sbjct: 830 TVVVKNLPQGTTEHKVRQFFRDCGAINGVKMMPGE-DGKSE-VAMIEFNTRDDAAAAQTR 887
Query: 153 DESLFRGRQIKVN 165
D+ F G I+V+
Sbjct: 888 DQKTFDGNTIQVH 900
>gi|21672973|ref|NP_661038.1| RNA-binding protein [Chlorobium tepidum TLS]
gi|21646033|gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ Y T E+L F G V+ I+ +KF G KGF +++ ++ + A+ A
Sbjct: 2 NIYIGNLPYSVTDEDLRDKFSEFGQVHSANIITDKFSGRSKGFGFVDMPNESEAREAIDA 61
Query: 152 MDESLFRGRQIKVN 165
M++ F+GR IKVN
Sbjct: 62 MNDKDFKGRTIKVN 75
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 87 KEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSV 146
+E LRS++VGN+ Y AT E+L+ F G V ++ ++ G PKG+ + EF DK++
Sbjct: 8 RERSLRSVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETA 67
Query: 147 QTAM 150
+AM
Sbjct: 68 LSAM 71
>gi|413918641|gb|AFW58573.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D R+++V NV +G++ + L HF+ G+V + I+ + G G AYIEF K+S + A
Sbjct: 24 DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQA 83
Query: 150 MAMDESLFRGRQIKV 164
+ ++ + F R +KV
Sbjct: 84 LTLNGTSFMSRILKV 98
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
PP + N+ I+E + R+IYVGN+ A+++ + F CG + V + + +
Sbjct: 27 PPITGNVDPSKIDEIR----RTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGD--ETQ 80
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
P FA++EFA+ +SVQ A+ + ++F R IKVN
Sbjct: 81 PTRFAFVEFANPESVQVALQYNGAMFGDRPIKVN 114
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 47 REMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAE 106
++M E+ ++ LQ E D Q S N+ ++ +++++ + R I+VG + +
Sbjct: 21 QQMSEQCKQANVLQGE-DTQPS-------NDGVSAPAKKREKNEERKIFVGGISWDTNEN 72
Query: 107 ELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNP 166
+L +HF+ G V V + + + G +GFA++EFA ++ + A+A ++ +G++ +V P
Sbjct: 73 DLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEACKKALAKKDAELKGKKCEVKP 132
Query: 167 KRT 169
++
Sbjct: 133 AKS 135
>gi|407044727|gb|EKE42787.1| enhancer binding protein-2, putative [Entamoeba nuttalli P19]
Length = 229
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +Y+GN+ Y T E L++HF G + ++ F G+ +GFA++E+ ++ + A+
Sbjct: 1 MTKLYIGNLSYKTTEENLKTHFESFGKIKEAKLMI--FRGYSRGFAFVEYETEEDAKKAV 58
Query: 151 AMDESLFRGRQIKV---NPKRTNRPGISTTNR--GGPRG 184
A + F GR++KV P + + G + GPRG
Sbjct: 59 AANGVEFEGRKLKVEIARPPKERKEGSEGEKKTTAGPRG 97
>gi|169613703|ref|XP_001800268.1| hypothetical protein SNOG_09984 [Phaeosphaeria nodorum SN15]
gi|160707211|gb|EAT82319.2| hypothetical protein SNOG_09984 [Phaeosphaeria nodorum SN15]
Length = 498
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT ++ F C V V I+ +K D PKGF Y+EF D ++ A+A+
Sbjct: 74 TAHLGNLSFDATEGDVNDFFADC-EVTNVRIVEDKLDRKPKGFGYVEFGSVDGLKKALAL 132
Query: 153 DESLFRGRQIKVNP 166
+ F+GR +++ P
Sbjct: 133 SGTQFQGRNVRIFP 146
>gi|119497981|ref|XP_001265748.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
gi|119413912|gb|EAW23851.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
Length = 1281
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I++ N+D+ A +L+ F G++ V I K DG KGF YI F+ K+ + A+A
Sbjct: 979 REIHISNIDWKANEGDLKEVFQKYGTIETVRI-PRKVDGGSKGFGYIVFSTKEEAEAALA 1037
Query: 152 MDESLFRGRQIKV---NPKRTNRPGISTTNR 179
M E FR R ++V P+ R + NR
Sbjct: 1038 MHEQEFRSRPLQVRISTPQGAKRTATTIVNR 1068
>gi|209364023|ref|YP_001424629.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
gi|207081956|gb|ABS78255.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
Length = 112
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVG++ Y TA+EL+S F G + ++ ++ G KGFA+I + +D+ Q A++
Sbjct: 11 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 70
Query: 154 ESL-FRGRQIKVNPKRTN 170
+ +GR+I+VN R N
Sbjct: 71 NGIDLQGRKIRVNIAREN 88
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
SIYVGN+ Y AT E+LE+ F GSV +V + ++ G +GF ++E + A+A
Sbjct: 2 SIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFVEMSTDAEEDAAIAE 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GRQ+KVN R
Sbjct: 62 LDGAEWMGRQLKVNKAR 78
>gi|261824468|pdb|2KI2|A Chain A, Solution Structure Of Ss-Dna Binding Protein 12rnp2
Precursor, Hp0827(O25501_helpy) Form Helicobacter Pylori
Length = 90
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+R+IYVGN+ Y AT+E+++ F G V V ++ ++ PKGF ++E + +SV A+
Sbjct: 1 MRNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQE-ESVSEAI 59
Query: 151 A-MDESLFRGRQIKV---NPKRT 169
A +D + F GR I+V NPK++
Sbjct: 60 AKLDNTDFMGRTIRVTEANPKKS 82
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 51 EEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKKE----ADLRSIYVGNVDYGATAE 106
+E + K ++ VD + S+G P SI K A +IYVGN+ + TA
Sbjct: 104 DELDSAKATETPVDSR-SVGHP-------RFSIRRPKPDGYIAPKSTIYVGNLFFDVTAG 155
Query: 107 ELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKVN 165
+L++ F CG V V +L + + G KGF Y++F D ++ + A+A M LF GR + VN
Sbjct: 156 DLKNEFSKCGPVEGVRLLYD-YRGVSKGFGYVKFHDVETAEKAVALMHGQLFEGRHLAVN 214
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R++Y+GN+ + T +L F ++ V + ++ G +GF + +F D +S + A
Sbjct: 234 RTLYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFT 293
Query: 152 -MDESLFRGRQIKVNPKRTN 170
+ GR ++++ +N
Sbjct: 294 LLSTKTPYGRPLRIDYSHSN 313
>gi|452851689|ref|YP_007493373.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451895343|emb|CCH48222.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 87
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
++IYVGN+ + AT +E+ + F G V V ++ ++ G P+GF ++E ++ + A
Sbjct: 3 KNIYVGNLPWSATEDEVRAAFAAYGEVTSVKLIEDRETGRPRGFGFVEMSEDGYLDAIEA 62
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
+D F GR IKVN R RP
Sbjct: 63 LDGKDFGGRNIKVNEAKPRVERP 85
>gi|359486200|ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Vitis vinifera]
Length = 838
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S E+ K D + ++ N+D A E L F G V + IL +KF G +G AY++F+
Sbjct: 643 SHEKNKYLDQCTAFISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRGLAYVDFS 702
Query: 142 DKDSVQTAMAMDESLFRGRQIKV---NPKRTNRPG 173
D + A+A ++ + RG+++ + +PK+ + G
Sbjct: 703 DDAHLAAAVAKNKKMLRGKRLSIARSDPKQKGKKG 737
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+SI++GN+ Y + HF CG + V ++ + G KGF Y+ F ++D+V A+
Sbjct: 461 KSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLALE 520
Query: 152 MDESLFRGRQIKVNP 166
+D + R+++V P
Sbjct: 521 LDGTTISNREVRVKP 535
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 22/106 (20%)
Query: 79 LNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN----------------RVT 122
++ S+EE KE D ++I+VGN+ T ++L+ F G ++ RV
Sbjct: 346 MDTSLEEIKE-DEKTIFVGNLPKDVTKKKLKKIFKQFGKIDTIRLRGKIAKSANVSKRVA 404
Query: 123 ILCNKFDGHPK---GFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ N+ HPK +AYI+F K+SV+ +++M+ + F G ++VN
Sbjct: 405 AIKNEL--HPKLKSVYAYIKFVSKESVKESLSMNGTEFEGNYLRVN 448
>gi|440293229|gb|ELP86372.1| 28 kDa ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 315
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +YVGN+ Y T + L++HF G + ++ F G+ KGFA++E+ + D + A+
Sbjct: 1 MTKLYVGNLSYSTTEDSLKTHFESFGKIKECHLIT--FRGYSKGFAFVEYENTDDAKKAI 58
Query: 151 AMDESLFRGRQIKV-------NPKRTNR-PGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 202
+ + F GR+++V KR R P R R +G +R GYRP
Sbjct: 59 SSNGVEFDGRKLRVEFVKEKTEEKREPRAPRAYREQRPQREQRPQGEENRAR----GYRP 114
Query: 203 VRRA 206
RRA
Sbjct: 115 HRRA 118
>gi|302497047|ref|XP_003010524.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
gi|291174067|gb|EFE29884.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K G PKGF Y+EFA D ++ A+
Sbjct: 8 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 66
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 67 QGTSLQGRNIRVS 79
>gi|37522099|ref|NP_925476.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35213098|dbj|BAC90471.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 123
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + T +++ F G+V V I ++ G P+GFA++E AD++ + ++
Sbjct: 2 TVFVGNLPFSVTEQDITEAFSEYGTVKSVKIPTDRETGRPRGFAFVEMADEEEAKVIESL 61
Query: 153 DESLFRGRQIKVN 165
D + + RQI+VN
Sbjct: 62 DGATWDNRQIRVN 74
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+S+++GN+ + + + +HF CG + V I+ + G KGF Y+ F +D+V A+
Sbjct: 445 KSVFIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE 504
Query: 152 MDESLFRGRQIKVNP 166
+D + R+++V P
Sbjct: 505 LDGTTILNREVRVKP 519
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 22/103 (21%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN----------------RVTILC 125
S+E+ KE + R+I+VGN+ T ++L+ F G ++ RV +
Sbjct: 333 SLEDFKENE-RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAIT 391
Query: 126 NKFDGHPK---GFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
N D HPK +AYI F ++S + A++++ + F G ++V+
Sbjct: 392 N--DLHPKMKSVYAYIRFESEESTKKALSINGTKFEGNYVRVD 432
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 267 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 326
Query: 152 MDE 154
++E
Sbjct: 327 LNE 329
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V NV++ A+ ++L+ F G+V V L K DG KGF Y+ F+ K+ A+A
Sbjct: 995 REIHVSNVNWSASEDDLKELFSRFGTVELVR-LPRKVDGGSKGFGYVVFSSKEEATAALA 1053
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGG 181
M E FRGR + V P+ R + R G
Sbjct: 1054 MHEQEFRGRPLHVKVSAPQGAKRIAATVVTRVG 1086
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++ V N+ G T ++ F CG++N V ++ + DG + A IEF +D A
Sbjct: 829 TVVVKNLPQGTTEHKVRQFFRDCGAINGVKMMPGE-DGKSE-VAMIEFNTRDDAAAAQTR 886
Query: 153 DESLFRGRQIKVN 165
D+ F G I+V+
Sbjct: 887 DQKTFDGNTIQVH 899
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGH 131
PP + N+ I+E + R+IYVGN+ A+++ + F CG + V + ++
Sbjct: 160 PPITGNVDPSKIDEIR----RTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEM--Q 213
Query: 132 PKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
P FA++EFA+ +SVQ A+ + ++F R IKVN
Sbjct: 214 PTRFAFVEFANPESVQVALQYNGAMFGDRPIKVN 247
>gi|195612410|gb|ACG28035.1| RNA-binding protein-like [Zea mays]
Length = 480
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSV--NRVTILCNKFD 129
PP S+N N++I+E E D +IYV N+ AT +LE F G++ N + + NK
Sbjct: 294 PPFSSNPENINIQEP-EVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQ 352
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
G GF +EF D SVQ+A+ GRQ V KR
Sbjct: 353 GFCYGF--VEFEDSTSVQSAIEASPVAIGGRQCYVEEKR 389
>gi|156058226|ref|XP_001595036.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980]
gi|154700912|gb|EDO00651.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 577
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
++++GN+ + AT ++ F GC +N V I+ +K + PKGF Y EF + +++A+ +
Sbjct: 80 TVHLGNLSFDATIGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 138
Query: 153 DESLFRGRQIKVN----PK-RTNRPGI 174
+ + F+GR I+++ PK R +RP +
Sbjct: 139 NGTQFQGRNIRISVADPPKDRGDRPDV 165
>gi|219363493|ref|NP_001136675.1| uncharacterized protein LOC100216804 [Zea mays]
gi|194696592|gb|ACF82380.1| unknown [Zea mays]
gi|223948065|gb|ACN28116.1| unknown [Zea mays]
gi|238015228|gb|ACR38649.1| unknown [Zea mays]
gi|413936937|gb|AFW71488.1| RNA-binding protein-like protein [Zea mays]
Length = 480
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSV--NRVTILCNKFD 129
PP S+N N++I+E E D +IYV N+ AT +LE F G++ N + + NK
Sbjct: 294 PPFSSNPENINIQEP-EVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQ 352
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKR 168
G GF +EF D SVQ+A+ GRQ V KR
Sbjct: 353 GFCYGF--VEFEDSTSVQSAIEASPVAIGGRQCYVEEKR 389
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEF-ADKDSVQTAMA 151
SIYVGN+ Y T E++ F G+VN VT+ ++ G +GFA++E D++ A
Sbjct: 2 SIYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEA 61
Query: 152 MDESLFRGRQIKVN---PKRTNRP 172
+D + + GR +KVN P+ N+P
Sbjct: 62 LDGAEWMGRNLKVNKAKPREDNKP 85
>gi|340959676|gb|EGS20857.1| translation initiation factor 4B-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 526
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT++ + F C V+ V I+ + PKGFAY EFAD + ++TA+
Sbjct: 76 TAHLGNLSYEATSDAITEFFKDCKVVS-VRIITDHEHNRPKGFAYAEFADVEGLKTALTR 134
Query: 153 DESLFRGRQIKV 164
D + GR I+V
Sbjct: 135 DGMVLEGRPIRV 146
>gi|15645446|ref|NP_207620.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|410024053|ref|YP_006893306.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif1]
gi|410501820|ref|YP_006936347.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif2]
gi|410682339|ref|YP_006934741.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|419417638|ref|ZP_13958055.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|2313961|gb|AAD07877.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|384372572|gb|EIE28156.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|409893980|gb|AFV42038.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|409895710|gb|AFV43632.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif1]
gi|409897371|gb|AFV45225.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif2]
Length = 82
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+R+IYVGN+ Y AT+E+++ F G V V ++ ++ PKGF ++E + +SV A+
Sbjct: 1 MRNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQE-ESVSEAI 59
Query: 151 A-MDESLFRGRQIKV---NPKRT 169
A +D + F GR I+V NPK++
Sbjct: 60 AKLDNTDFMGRTIRVTEANPKKS 82
>gi|153208628|ref|ZP_01946885.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
gi|120575889|gb|EAX32513.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
Length = 103
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVG++ Y TA+EL+S F G + ++ ++ G KGFA+I + +D+ Q A++
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 154 ESL-FRGRQIKVNPKRTN 170
+ +GR+I+VN R N
Sbjct: 66 NGIDLQGRKIRVNIAREN 83
>gi|165919016|ref|ZP_02219102.1| RNA-binding protein [Coxiella burnetii Q321]
gi|165917271|gb|EDR35875.1| RNA-binding protein [Coxiella burnetii Q321]
Length = 107
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVG++ Y TA+EL+S F G + ++ ++ G KGFA+I + +D+ Q A++
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 154 ESL-FRGRQIKVNPKRTN 170
+ +GR+I+VN R N
Sbjct: 66 NGIDLQGRKIRVNIAREN 83
>gi|161830439|ref|YP_001597044.1| RNA-binding protein [Coxiella burnetii RSA 331]
gi|161762306|gb|ABX77948.1| RNA-binding protein [Coxiella burnetii RSA 331]
Length = 107
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
IYVG++ Y TA+EL+S F G + ++ ++ G KGFA+I + +D+ Q A++
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 154 ESL-FRGRQIKVNPKRTN 170
+ +GR+I+VN R N
Sbjct: 66 NGIDLQGRKIRVNIAREN 83
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + T + LE HF CG + V + DG KGFA++EF +S Q A+ M
Sbjct: 345 TLFVGNISFQTTQDSLERHFSKCGPIKAVRVAMGD-DGRVKGFAHVEFESPESAQKALEM 403
Query: 153 DESLFRGRQIKVN 165
+ + GR+++++
Sbjct: 404 NGAPCDGRELRLD 416
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D + ++VGN+ + T + L F G+V V + DG PKGFA++EFA Q A
Sbjct: 238 DKKELFVGNLSFHTTEDSLGQAFGEYGTVTNVKLPQQ--DGRPKGFAFVEFATHKEAQAA 295
Query: 150 M-AMDESLFRGRQIKVN 165
+ A + F GR +++N
Sbjct: 296 LDAYNGQDFEGRALRIN 312
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L HF CG + V I+ + KGFAY++F D SV A+
Sbjct: 299 RSIFVGNLDFEEDEENLWKHFLSCGDIEYVRIVRDSKTNLGKGFAYVQFKDLQSVNKALL 358
Query: 152 MDESLF------RGRQIKV 164
+ + + +GR+++V
Sbjct: 359 LADKVMIKKDGKKGRKLRV 377
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 67 MSMG-SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILC 125
MS G PP + +++L ++ N+ Y T E+L F CG V + I
Sbjct: 1 MSYGRPPPRIDGMVSLKVD-------------NLTYRTTPEDLRRVFERCGEVGDIYIPR 47
Query: 126 NKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQIKVNPKRTNRP 172
++F +GFA++ F DK + A+ AMD L GR+++V R RP
Sbjct: 48 DRFTRESRGFAFVRFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRP 95
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 67 MSMG-SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILC 125
MS G PP + +++L ++ N+ Y T E+L F CG V + I
Sbjct: 1 MSYGRPPPRIDGMVSLKVD-------------NLTYRTTPEDLRRVFERCGEVGDIYIPR 47
Query: 126 NKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQIKVNPKRTNRP 172
++F +GFA++ F DK + A+ AMD L GR+++V R RP
Sbjct: 48 DRFTRESRGFAFVRFYDKRDAEDALDAMDGRLLDGRELRVQMARYGRP 95
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T ++L + F G+V R I ++ G +GF ++E + +D + A+ A
Sbjct: 2 SIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIDA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
+D + ++GR +KVN RP + RGG
Sbjct: 62 LDGAEWKGRSLKVNKA---RPRDNNRQRGG 88
>gi|452821170|gb|EME28204.1| nucleolar RNA-binding protein-like protein [Galdieria sulphuraria]
Length = 687
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 43 KARVREMEEEAEKLKQLQSEVDKQMSMGSPPNSNNLLNLSIEEKK-EADLRSIYVGNVDY 101
K + E+ K K+++++ D + + N+L + SI ++K DL +I+V N+
Sbjct: 496 KPSFSQKEDYRSKPKRMKTKKDDSEHQNNMLSLNSLQSTSIGDRKWHKDLHTIFVSNLPK 555
Query: 102 GATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 161
T E+ +S F ++ ++ +G PKGF Y+EF + V+ A+ D+S+F G++
Sbjct: 556 TTTEEDFQSLFQSVDGFLEARLVKDR-EGIPKGFGYVEFQNNIGVREALKADQSMFLGQK 614
Query: 162 IKVNPKRTNRPGISTT 177
I V + R +S+T
Sbjct: 615 IIVKRSKPPRFQMSST 630
>gi|449016079|dbj|BAM79481.1| similar to cleavage stimulation factor subunit 2 [Cyanidioschyzon
merolae strain 10D]
Length = 300
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
++++GN+ YG T + L G V + IL +K G PKG+ + E+ D ++ ++A+
Sbjct: 7 TVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETAESAVRN 66
Query: 152 MDESL-FRGRQIKVNPKRTNR----------PGISTTNRGGPRGRGRGRVSRGAAMYGGY 200
++E + F GR +++ P R PG GG G G G AA +G Y
Sbjct: 67 LNERIEFGGRMLRIAPSSQTRNQASAGGSTAPGAGAAPEGGRSGPGLGP-GASAASWGAY 125
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T ++L + F G+V R I ++ G +GF ++E + +D + A+ A
Sbjct: 2 SIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAINA 61
Query: 152 MDESLFRGRQIKVNPKRTNRPGISTTNRGG 181
+D + ++GR +KVN RP + RGG
Sbjct: 62 LDGAEWKGRSLKVNKA---RPRDNNRQRGG 88
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R IYV N+ Y T +L F G V V I K +G +GFA++ FA KD A+A
Sbjct: 967 REIYVCNLPYKTTEGDLVELFTAYGDVESVRI-PTKVNGETRGFAFVTFATKDQSNAALA 1025
Query: 152 MDESLFRGRQIKV 164
M+E F+GR++ V
Sbjct: 1026 MNEKTFKGRELNV 1038
>gi|372269331|ref|ZP_09505379.1| RNA-binding region RNP-1 (RNA recognition motif) [Alteromonas sp.
S89]
Length = 89
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ YG T++EL F G ++R T++ ++ G KGF ++E + D + A+
Sbjct: 2 NIYIGNLAYGVTSDELHEAFGAFGEISRATVITDRETGRSKGFGFVEMPNDDEARKAIEE 61
Query: 152 MDESLFRGRQIKVN 165
M++ GR I+VN
Sbjct: 62 MNDQPLSGRNIRVN 75
>gi|332710459|ref|ZP_08430406.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332350790|gb|EGJ30383.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y AT ++L++ F G+V RV + ++ G +GFA++E + D +A+ +
Sbjct: 2 TIYVGNLSYQATEDDLKTVFGDYGTVKRVVMPTDRETGKMRGFAFVEMTESDQEDSAIES 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR+I+VN R
Sbjct: 62 LDGAEWMGRRIRVNKAR 78
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
++IYVGN+ + +T E++ + F G V V ++ ++ G P+GF ++E D+ +++
Sbjct: 3 KNIYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMEDQGALEAIEN 62
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
+D F GR +KVN R RP
Sbjct: 63 LDGKDFGGRNLKVNEARP-RP 82
>gi|326472886|gb|EGD96895.1| translation initiation factor 4B [Trichophyton tonsurans CBS
112818]
Length = 540
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K G PKGF Y+EFA D ++ A+
Sbjct: 96 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 154
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 155 QGTSLQGRNIRVS 167
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 90 DLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTA 149
D +I+V N+ Y A+++ F CG V V ++ N + KGFAYI+F D SV A
Sbjct: 91 DCLTIFVKNLSYDLNADQIGDSFRPCGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKA 150
Query: 150 MAMDESLFRGRQIKVN 165
+ M+ GRQ++V+
Sbjct: 151 LQMNGKKVHGRQVQVD 166
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 43/82 (52%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ +++ + Y A+ +++S F CG + + + + G+ +I F+D +++Q A+
Sbjct: 1 MYQVFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKAL 60
Query: 151 AMDESLFRGRQIKVNPKRTNRP 172
A++ + GR I V + +P
Sbjct: 61 ALNGTQLGGRYIDVKEAKGTQP 82
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+SI++GN+ Y + HF CG + V ++ + G KGF Y+ F ++D+V A+
Sbjct: 451 KSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKNEDAVTLALE 510
Query: 152 MDESLFRGRQIKVNP 166
+D + R+++V P
Sbjct: 511 LDGTTISNREVRVKP 525
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 22/107 (20%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVN----------------RV 121
+++ S+EE KE D R+I+VGN+ T ++L F G ++ RV
Sbjct: 335 IMDTSLEEIKE-DERTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRV 393
Query: 122 TILCNKFDGHPK---GFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
+ N+ HPK +AYI+F K+SV+ +++++ + F G ++VN
Sbjct: 394 AAIKNEL--HPKLKSVYAYIKFVSKESVKESLSINGTEFEGNYLRVN 438
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
S+ V N+ Y T E+L F CG V + I ++F +GFA++ F DK + A+ A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
MD L GR+++V R RP
Sbjct: 75 MDGRLLDGRELRVQMARYGRP 95
>gi|401429538|ref|XP_003879251.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495501|emb|CBZ30806.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 455
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHF--HGCGSVNRVTILCNKFDGHPKGF 135
+ + +E + SI++GNV Y T E++ S F HG V RV ++ ++ G KGF
Sbjct: 256 VTTMDVESRAYPPETSIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGF 315
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIK-VNPKRTNRPGISTTNRGGPRGRGRGRVSRGA 194
Y+EF SVQ A+ GR+++ V+ ++ ++T NR R RG RG
Sbjct: 316 GYVEFMHASSVQPAIETRGDKLNGRELRIVHVNKSKEVKVATKNRREKR-RGEHAGGRGG 374
Query: 195 A 195
A
Sbjct: 375 A 375
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCN----------- 126
+L ++ +E D R+++VGN+ ++E F CGS+ V I C
Sbjct: 147 VLRHALHSNEEEDARTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQN 206
Query: 127 ------------KFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN 165
K D AY+ F S+ +A+ + +F R + V
Sbjct: 207 MGRAVRVLRGEIKKDAKYSATAYVLFDSAKSIASALEKNGLVFHSRHLVVT 257
>gi|358379936|gb|EHK17615.1| hypothetical protein TRIVIDRAFT_80616 [Trichoderma virens Gv29-8]
Length = 556
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT+E + F C V+ V I+ ++ PKGF Y+EF + D ++ A+ +
Sbjct: 78 TAHLGNLSYDATSESVTDFFADCDVVS-VRIIEDRELQRPKGFGYVEFGNLDGLKKALTL 136
Query: 153 DESLFRGRQIKV 164
D F GR IK+
Sbjct: 137 DGQSFEGRMIKI 148
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|121534066|ref|ZP_01665891.1| RNP-1 like RNA-binding protein [Thermosinus carboxydivorans Nor1]
gi|121307169|gb|EAX48086.1| RNP-1 like RNA-binding protein [Thermosinus carboxydivorans Nor1]
Length = 83
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+++YVGN+ +G T L F G+V I+ +K G +GF ++E AD+D+ + A
Sbjct: 3 KTLYVGNLPWGTTEAALADAFRPYGTVYSSRIIMDKETGRSRGFGFVEVADEDAEKMVTA 62
Query: 152 MDESLFRGRQIKVN 165
M+ S GRQI VN
Sbjct: 63 MNGSELGGRQIVVN 76
>gi|327300000|ref|XP_003234693.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
gi|326463587|gb|EGD89040.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
Length = 547
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K G PKGF Y+EFA D ++ A+
Sbjct: 84 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 142
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 143 QGTSLQGRNIRVS 155
>gi|428207498|ref|YP_007091851.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009419|gb|AFY87982.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 98
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-- 150
SIYVGN+ Y T E+L + F GSV RV + ++ G +GFA++E D D+ +TA
Sbjct: 2 SIYVGNLSYEVTQEDLSAAFAEYGSVKRVQLPTDRETGRMRGFAFVEM-DTDTEETAAID 60
Query: 151 AMDESLFRGRQIKVNPK--RTNRPGISTTNRG 180
A+D + + GR +KVN R +R RG
Sbjct: 61 ALDGAEWMGRNLKVNKAKPREDRSSFGGNRRG 92
>gi|326480206|gb|EGE04216.1| translation initiation factor 4B [Trichophyton equinum CBS 127.97]
Length = 551
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K G PKGF Y+EFA D ++ A+
Sbjct: 84 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 142
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 143 QGTSLQGRNIRVS 155
>gi|320165688|gb|EFW42587.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 316
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+++GN+ Y ATA+++ S CG + V +L NK G +G A++E++++ S+Q A+
Sbjct: 189 VFIGNLPYTATADDVRSFLSPCGETDAVRMLTNKATGESRGCAFVEYSNQKSLQKALRYH 248
Query: 154 ESLFRGRQIKV 164
F R+++V
Sbjct: 249 GMAFGDREVRV 259
>gi|288942469|ref|YP_003444709.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288897841|gb|ADC63677.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 94
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
IYVGN+ Y T ++L F G+V ++ +KF G KGFA++E A+ +
Sbjct: 3 IYVGNLAYSVTQDDLREAFGAYGNVESANLITDKFTGDSKGFAFVEMPSNSEADAAIKGL 62
Query: 153 DESLFRGRQIKVN--PKRTNRPGISTTNRGGPR 183
+E+ +GR ++VN R++RP S + GG R
Sbjct: 63 NETPLKGRPLRVNQAKPRSDRP--SRSGGGGSR 93
>gi|396476405|ref|XP_003840015.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
gi|312216586|emb|CBX96536.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
Length = 594
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT ++ F GC V V I+ +K D PKGF Y+EF + ++ A+ +
Sbjct: 138 TAHLGNLSFDATEGDVNDFFSGC-EVTNVRIVEDKLDRKPKGFGYVEFGSVEGLKKALDL 196
Query: 153 DESLFRGRQIKVN 165
S F+GR ++V+
Sbjct: 197 SGSQFQGRNVRVS 209
>gi|451851719|gb|EMD65017.1| hypothetical protein COCSADRAFT_88594 [Cochliobolus sativus ND90Pr]
Length = 523
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT ++ F C V V I+ +K D PKGF Y+EF D ++ A+ +
Sbjct: 74 TAHLGNLSFDATEGDVTDFFADC-EVTNVRIVEDKLDRKPKGFGYVEFGSVDGLKKALDL 132
Query: 153 DESLFRGRQIKVN----PKRTNRP---GISTTNRGGP 182
+ F+GR I+V+ PK +RP IS R GP
Sbjct: 133 SGTSFQGRNIRVSVAEPPK--DRPEARDISDWTRKGP 167
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 73 PNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHP 132
P + +L ++E D ++I+VGN+ + E L+ F CG V I + DG
Sbjct: 340 PKTERPAHLPVDE----DSKTIFVGNLSFRTDKETLKKFFASCGKVADARIA--EADGKS 393
Query: 133 KGFAYIEFADKDSVQTAMAMDESLFRGRQIKVN--PKRTNRPGISTT------NRGGPRG 184
+GF ++EF ++ V+ A+ GR IKV+ R R G + + NRGGPRG
Sbjct: 394 RGFGHVEFEERSGVENALKKVGEQIDGRPIKVDVAASRGKREGFNRSQGNFNNNRGGPRG 453
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 115 CGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQI---KVNPKRTNR 171
CGSV RV +L N+ G KG A++ F ++ A+ M S F GR + K PK T R
Sbjct: 287 CGSVARVNLLKNE-QGRSKGIAFVSFETEEGCNKAVEMSNSEFMGRYLIIEKTKPK-TER 344
Query: 172 P 172
P
Sbjct: 345 P 345
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
++++YVGN+ Y T +EL+ F G V+ I+ ++ G +GF ++E +D D+ +
Sbjct: 2 VKTLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMSDDDAQKAID 61
Query: 151 AMDESLFRGRQIKVNPKRTNRP 172
+++ F GR +KVN R +P
Sbjct: 62 SLNGVNFGGRNLKVNEARERKP 83
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
Length = 1329
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R IYV N+ Y T +L F G V V I K +G +GFA++ FA KD A+A
Sbjct: 1012 REIYVCNIPYKTTEGDLVELFTAYGDVESVRI-PTKVNGETRGFAFVSFATKDQSTAALA 1070
Query: 152 MDESLFRGRQIKV 164
++E F+GR++ V
Sbjct: 1071 LNEKTFKGRELNV 1083
>gi|297739447|emb|CBI29629.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 82 SIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA 141
S E+ K D + ++ N+D A E L F G V + IL +KF G +G AY++F+
Sbjct: 643 SHEKNKYLDQCTAFISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRGLAYVDFS 702
Query: 142 DKDSVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 188
D + A+A ++ + RG+++ + R P+ +G+G
Sbjct: 703 DDAHLAAAVAKNKKMLRGKRLSI-------------ARSDPKQKGKG 736
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+ I++GN+ Y +E+ +F CG+++ V I+ + G KGF Y++F K+SV+ AM
Sbjct: 281 KGIFIGNLPYSIQEDEIWDYFKDCGTISAVRIVRDNATGVSKGFGYVDFETKESVELAMQ 340
Query: 152 MDESLFRGRQIKV 164
+ + R+I+V
Sbjct: 341 IKGKKVQNREIRV 353
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L F GSV RV + ++ G +GF ++E +D +A+ A
Sbjct: 2 SIYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQA 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR +KVN R
Sbjct: 62 LDGAEWMGRAMKVNKAR 78
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L +HF CG + V I+ + KGFAY++F+D SV A+
Sbjct: 269 RSIFVGNLDFEEDEESLWNHFSKCGEIEYVRIIRDSKTNLGKGFAYVQFSDLSSVNKALL 328
Query: 152 MD 153
++
Sbjct: 329 LN 330
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y + ++L F G V I+ +KF G KGF ++E +D D+ + A+ A
Sbjct: 2 NIYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEA 61
Query: 152 MDESLFRGRQIKVN 165
M F GR I VN
Sbjct: 62 MHNKDFMGRSIMVN 75
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 98
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y AT +L + F G V RV + ++ G +GFA+++ +++ A++
Sbjct: 2 TIYVGNLSYRATEADLRAVFTDYGEVTRVVLPTDRETGRMRGFAFVDLSEESQEDEAISE 61
Query: 152 MDESLFRGRQIKVN---PKRTNRP 172
+D + + GRQI+VN PK +RP
Sbjct: 62 LDGAEWMGRQIRVNKAKPKEDSRP 85
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|158335180|ref|YP_001516352.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359460290|ref|ZP_09248853.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158305421|gb|ABW27038.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 82
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+ Y AT ++ F+ G+V RV + ++ G +GFA++E + + +TA+A
Sbjct: 2 TIYIGNLSYQATENDVREVFNEYGTVKRVVLPVDRETGRMRGFAFVEMTEDNDEETAIAD 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GRQ+KVN
Sbjct: 62 LDGAEWMGRQLKVN 75
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
+YVG++D+ T +++S F CG V VT+ N+ +G KG+A+++FAD + + AM ++
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTL--NRDNGKSKGYAFVQFADAGAAKLAMELN 414
Query: 154 ESLFRGRQIKVN 165
GR +KVN
Sbjct: 415 GVEVAGRPLKVN 426
>gi|134076092|emb|CAK39451.1| unnamed protein product [Aspergillus niger]
Length = 1132
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R I+V N+D+ A+ +++E F G+V V I K DG KGF Y+ F+ K+ + ++
Sbjct: 832 REIHVSNLDWKASEQDVEELFLRFGTVELVRI-PRKVDGGSKGFCYVVFSSKEEAEASLV 890
Query: 152 MDESLFRGRQIKV---NPKRTNRPGISTTNRGGPR 183
M E FR R + V P+ R + +R G R
Sbjct: 891 MHEQQFRSRPLHVKLSTPQGAKRSATTILSRVGTR 925
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 90 DLR-SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQT 148
DL+ +IY+GN+ Y + ++L F G V+ I+ +KF G KGF +++ + ++ +
Sbjct: 7 DLKMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRA 66
Query: 149 AM-AMDESLFRGRQIKVN 165
A+ AM+E F+GR IKVN
Sbjct: 67 AIEAMNEQEFKGRTIKVN 84
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|296815986|ref|XP_002848330.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
gi|238841355|gb|EEQ31017.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
Length = 545
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ + AT +++ F C V V I+ +K G PKGF Y+EFA D ++ A+
Sbjct: 93 TAHIGNLSFEATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 151
Query: 153 DESLFRGRQIKVN 165
+ +GR I+V+
Sbjct: 152 QGTSLQGRNIRVS 164
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
++V N+ + AT EE+ +HF G++ V ++ ++ KG AYI +A ++ TAM M
Sbjct: 380 LFVRNLPFTATEEEVAAHFAKHGALTAVHVIVDRTTRASKGLAYITYALPENATTAMREM 439
Query: 153 DESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 184
D S+F+GR I + P + GI+ + G RG
Sbjct: 440 DGSIFQGRLIHLLPAKH---GIAGADGAGSRG 468
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AM 152
I V NV + AT +++ F+ G++ L KFDG+ +GFA++E + K +A+ A+
Sbjct: 814 IVVRNVAFEATKRDIQKLFNPFGALKSCR-LPKKFDGNHRGFAFVELSTKREATSALEAL 872
Query: 153 DESLFRGRQIKV 164
+ GR++ +
Sbjct: 873 RGTHLYGRKLVI 884
>gi|218888048|ref|YP_002437369.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759002|gb|ACL09901.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 88
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+SIYVGN+ + AT +E+ S F+ G+V V ++ ++ G +GF ++E D + A
Sbjct: 3 KSIYVGNLPWSATEDEVRSLFNTYGTVLSVKLVTDRETGRARGFGFVEMDDAAAAAAIEA 62
Query: 152 MDESLFRGRQIKVNPKRTNRP 172
+D + F GR ++VN + P
Sbjct: 63 LDNTPFGGRNLRVNEAQPKAP 83
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI++GN+ + A E+L S+F CG + V I+ + KGFAY++F D++S+ A+
Sbjct: 221 RSIFIGNLSFDAQEEQLWSYFAHCGEIEFVRIVRDNKTNLGKGFAYVQFKDRESIDQALL 280
Query: 152 M-DESLFRGRQIKV 164
+ D+ GR+++V
Sbjct: 281 LHDKEGLCGRKLRV 294
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 26 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 85
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 86 RNLNGREFSGRALRVD 101
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RS+++GN+ Y E + HF CG+V V ++ + G KGF Y+ F D SV+ A+
Sbjct: 283 RSVFIGNLPYKIDEEIVRQHFMQCGNVISVRLVRDGKTGIGKGFGYVLFKDISSVEFALK 342
Query: 152 MDESLFRGRQIKVN---PKRTNRPGISTTNRGGPR 183
++ GR++++ K N+PG T GG R
Sbjct: 343 FNDKPLFGRKVRIKRSFEKEKNKPGNIT---GGKR 374
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|194332974|ref|YP_002014834.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194310792|gb|ACF45187.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFA-DKDSVQTAMA 151
+IY+GN+ Y T ++L F+ G V+ I+ +KF G KGF ++E D+D+ + +
Sbjct: 2 NIYIGNLPYNITEDDLREAFNEFGQVDSANIIIDKFSGRSKGFGFVEMPNDEDAEKAIDS 61
Query: 152 MDESLFRGRQIKVN 165
++++ F GR IKVN
Sbjct: 62 LNDTDFNGRTIKVN 75
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ S+ V N+ Y + E L F G V V I +++ +GFA++ F DK + AM
Sbjct: 13 MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAM 72
Query: 151 -AMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
AMD +L GR+++V R RP S +R GP
Sbjct: 73 DAMDGALLDGRELRVQMARYGRPPDSMYSRRGP 105
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 94 IYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAMD 153
++VGN+ A +++ F CG + V + +K KGFA+++F D SV+ A+ D
Sbjct: 138 VFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKD 197
Query: 154 ESLFRGRQIKVNPKRTNR 171
S F+G I+VN +++ R
Sbjct: 198 GSEFKGVSIRVNEEKSTR 215
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 5 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 64
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 65 RNLNGREFSGRALRVD 80
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 27 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 86
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 87 RNLNGREFSGRALRVD 102
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+ S+ V N+ Y + E L F G V V I +++ +GFA++ F DK + AM
Sbjct: 13 MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAM 72
Query: 151 -AMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 182
AMD +L GR+++V R RP S +R GP
Sbjct: 73 DAMDGALLDGRELRVQMARYGRPPDSMYSRRGP 105
>gi|317152544|ref|YP_004120592.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942795|gb|ADU61846.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+ +YVGN+ + +T +++ + F G V V ++ ++ G P+GF ++E D + + A
Sbjct: 3 KKLYVGNLSWSSTEDDVRAAFEAYGEVTSVNLIEDRETGRPRGFGFVEMDDAGAREAIAA 62
Query: 152 MDESLFRGRQIKVN--PKRTNRP 172
+D F GR IKVN R RP
Sbjct: 63 LDGKEFGGRNIKVNEAKAREERP 85
>gi|434386342|ref|YP_007096953.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428017332|gb|AFY93426.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 95
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IY+GN+ Y AT E+L++ F G+V RV + ++ G +GFA++E +D + A+
Sbjct: 2 TIYIGNLSYQATEEDLKTVFEDYGTVKRVVLPTDRETGRMRGFAFVEMSDDANEDNAITN 61
Query: 152 MDESLFRGRQIKVNPKR 168
+D + + GR +KVN R
Sbjct: 62 LDGAEWMGRSLKVNKAR 78
>gi|189499100|ref|YP_001958570.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189494541|gb|ACE03089.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 90
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IY+GN+ Y + EEL F G V+R I+ +K G KGF ++E + D Q A+ +
Sbjct: 2 NIYIGNLPYSLSEEELSDAFAQFGQVDRANIIMDKETGRSKGFGFVEMPNDDEAQNAIDS 61
Query: 152 MDESLFRGRQIKVN 165
+ +S GR IKVN
Sbjct: 62 LHDSDLNGRSIKVN 75
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA- 151
+IYVGN+ Y ATA++L F G+V RV++ ++ G +GFA++E + TA++
Sbjct: 2 TIYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVELEEDAHEDTAISE 61
Query: 152 MDESLFRGRQIKVN---PKRTNR 171
+D + + GRQ+KVN P+ R
Sbjct: 62 LDGAEWMGRQLKVNKAKPREATR 84
>gi|340518400|gb|EGR48641.1| predicted protein [Trichoderma reesei QM6a]
Length = 572
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+ ++GN+ Y AT E + F GC V+ V I+ ++ PKGF Y+EF + + ++ A+ +
Sbjct: 80 TAHLGNLSYDATTESVTDFFTGCDVVS-VRIIEDREMQRPKGFGYVEFGNLEGLKKALTL 138
Query: 153 DESLFRGRQIKV 164
D F GR I++
Sbjct: 139 DGQSFEGRMIRI 150
>gi|242065156|ref|XP_002453867.1| hypothetical protein SORBIDRAFT_04g020120 [Sorghum bicolor]
gi|241933698|gb|EES06843.1| hypothetical protein SORBIDRAFT_04g020120 [Sorghum bicolor]
Length = 481
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSV--NRVTILCNKFD 129
PP S+N N +I+E E D +IYV N+ AT +LE F G++ N + + NK
Sbjct: 295 PPFSSNPDNSNIQEP-EVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQ 353
Query: 130 GHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRT 169
G GF +EF D SVQ+A+ GRQ V KRT
Sbjct: 354 GFCYGF--VEFEDSTSVQSAIEASPVTIGGRQCYVEEKRT 391
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 64 DKQMSMGSPPNSNNLLNLS----IEEKKEAD-LRS---IYVGNVDYGATAEELESHFHGC 115
D S+ SPP + L ++ + D +RS ++V N+ Y AT E+LE+ F
Sbjct: 264 DPANSLPSPPADSQTLGTETTRILDSASDVDAVRSSMRLFVRNLPYSATKEDLEAEFEPF 323
Query: 116 GSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-AMDESLFRGRQIKVNPKRTNR 171
G++ V + +K G KGFA+I+++D D+ + A+ D F+GR + + P + R
Sbjct: 324 GNLAAVHVSMSKKTGSAKGFAFIQYSDADAAERALREKDGQTFQGRLLHILPGKAKR 380
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
RSI+VGN+D+ E L +HF CG + V I+ + KGFAY++F + SV A+
Sbjct: 299 RSIFVGNLDFEEAEESLWNHFKSCGEIEYVRIIRDAKTNMGKGFAYVQFKELQSVNKALL 358
Query: 152 MDESLFRGRQIKVNPKRTNR 171
+++ + + + K+ R
Sbjct: 359 LNDKVMMKSNVDKDSKKKGR 378
>gi|46580835|ref|YP_011643.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601851|ref|YP_966251.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387154093|ref|YP_005703029.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450255|gb|AAS96903.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562080|gb|ABM27824.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234537|gb|ADP87391.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 88
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
+SIYVGN+ + AT E+++ F G V V ++ ++ G +GF ++E D ++V A
Sbjct: 3 KSIYVGNLPWSATEEQVQDLFSPFGPVLSVKLVSDRDTGRARGFGFVEMDDAEAVAAIEA 62
Query: 152 MDESLFRGRQIKVN 165
+D + F GR ++VN
Sbjct: 63 LDNASFGGRTLRVN 76
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 49 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 108
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 109 RNLNGREFSGRALRVD 124
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y T E+L F G+V RV++ ++ G P+GF ++E + D A+
Sbjct: 2 TIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEE 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GRQ++VN
Sbjct: 62 LDGAEWLGRQMRVN 75
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
SIYVGN+ Y T E+L + F GSV RV + ++ G P+GFA++E + A+ A
Sbjct: 2 SIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEA 61
Query: 152 MDESLFRGRQIKVN 165
+D + + GR +KVN
Sbjct: 62 LDGAEWMGRDMKVN 75
>gi|425765515|gb|EKV04192.1| hypothetical protein PDIG_90560 [Penicillium digitatum PHI26]
gi|425783471|gb|EKV21319.1| hypothetical protein PDIP_07480 [Penicillium digitatum Pd1]
Length = 325
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 92 RSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMA 151
R IYV NV + A+ ++L+ F G + + ++ K +G KGF ++ FA K++ + A+A
Sbjct: 45 REIYVSNVAWDASEKDLKELFSKFGDIEKA-LIERKINGGSKGFGFVTFATKEAAKDAVA 103
Query: 152 MDESLFRGRQIKV 164
M+E +FR R ++V
Sbjct: 104 MNEYVFRSRPLRV 116
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM-A 151
+IYVGN+ Y AT E+L++ F G V +I+ ++ G KGF ++E + + + A+ A
Sbjct: 2 NIYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQA 61
Query: 152 MDESLFRGRQIKVNPKR 168
++E+ GR IKVN R
Sbjct: 62 LNETDMNGRNIKVNQAR 78
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|71745848|ref|XP_827554.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831719|gb|EAN77224.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 429
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHF--HGCGSVNRVTILCNKFDGHPKGF 135
+ L E ++ A S++VGNV Y + E L + F G V RV ++ ++ G KGF
Sbjct: 235 VTTLDPEGREYAPETSVFVGNVAYDSNEEALWNFFVEKGIRDVKRVRLVRDRESGMCKGF 294
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKV 164
Y+EF K SV A+A+ +LF R+I++
Sbjct: 295 GYVEFQSKGSVAAAIALRGTLFMDREIRI 323
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + AT ++L + F GCG + + + + G KGF Y+ F+D DS + + M
Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEM 426
Query: 153 DESLFRGRQIKVN 165
+ GR +++
Sbjct: 427 NGHFIAGRPCRLD 439
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|420450495|ref|ZP_14949355.1| RNA binding protein [Helicobacter pylori Hp H-45]
gi|393067028|gb|EJB67842.1| RNA binding protein [Helicobacter pylori Hp H-45]
Length = 82
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
+++IYVGN+ Y AT+E+++ F G V V ++ ++ PKGF ++E + +SV+ A+
Sbjct: 1 MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQE-ESVREAI 59
Query: 151 A-MDESLFRGRQIKV---NPKRT 169
A +D + F GR I+V NPK++
Sbjct: 60 AKLDNTDFMGRTIRVTEANPKKS 82
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 93 SIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAMAM 152
+++VGN+ + AT ++L + F GCG + + + + G KGF Y+ F+D DS + + M
Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEM 426
Query: 153 DESLFRGRQIKVN 165
+ GR +++
Sbjct: 427 NGHFIAGRPCRLD 439
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 83 IEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAD 142
++E E RS++VGN+ Y A+ ++L+ F G V ++ ++ G PKG+ + E+ D
Sbjct: 17 MKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKD 76
Query: 143 KDSVQTAMA-MDESLFRGRQIKVN 165
++ Q+AM ++ + GRQ++V+
Sbjct: 77 SETAQSAMRNLNGTEIHGRQLRVD 100
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 71 SPPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG 130
+PP SN + S EE+ + RS++VGN+ Y A+ E+L+ F G V ++ ++ G
Sbjct: 7 TPPPSNTSPSAS-EERAQ---RSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETG 62
Query: 131 HPKGFAYIEFADKDSVQTAMA-MDESLFRGRQIKV 164
PKG+ + E+ D ++ Q+AM ++ + GR ++V
Sbjct: 63 KPKGYGFCEYQDVETAQSAMRNLNNYDYNGRPLRV 97
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 91 LRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDGHPKGFAYIEFADKDSVQTAM 150
LRS++VGN+ Y AT E+L+ F GSV ++ ++ G PKG+ + E+ D+++ +AM
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
Query: 151 A-MDESLFRGRQIKVN 165
++ F GR ++V+
Sbjct: 75 RNLNGREFSGRALRVD 90
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 65 KQMSMGSPPNSNNLLNLSIEEK----KEADLRSIYVGNVDYGATAEELESHFHGCGSVNR 120
K +SM N +N+ I K K +SI++GN+ +G ++ +F CG +
Sbjct: 340 KALSMNGKKFEGNYVNVKIVAKLGQEKHNIKKSIFIGNLKFGMNTNDIWENFSKCGEIES 399
Query: 121 VTILCNKFDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
V ++ +K G +GF Y+ F +D+V A+ +D R ++V
Sbjct: 400 VRLIRDKKTGQTRGFGYVNFKSEDAVTLALKLDGVEINNRPVRV 443
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 81 LSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRV--------------TILCN 126
LS EE++E D ++I++ N+ L+ F G ++ + +
Sbjct: 256 LSPEEQEEVDRKTIFIDNIPKETKITTLKKVFGQYGPIDNLRFRNIVPKNPKISKKVAAI 315
Query: 127 KFDGHPK---GFAYIEFADKDSVQTAMAMDESLFRGRQIKV 164
K D HPK AYI++ ++S + A++M+ F G + V
Sbjct: 316 KQDIHPKIVTVVAYIKYKSEESAKKALSMNGKKFEGNYVNV 356
>gi|261331756|emb|CBH14750.1| DRBD9 [Trypanosoma brucei gambiense DAL972]
Length = 429
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 78 LLNLSIEEKKEADLRSIYVGNVDYGATAEELESHF--HGCGSVNRVTILCNKFDGHPKGF 135
+ L E ++ A S++VGNV Y + E L + F G V RV ++ ++ G KGF
Sbjct: 235 VTTLDPEGREYAPETSVFVGNVAYDSNEEALWNFFVEKGIRDVKRVRLVRDRESGMCKGF 294
Query: 136 AYIEFADKDSVQTAMAMDESLFRGRQIKV 164
Y+EF K SV A+A+ +LF R+I++
Sbjct: 295 GYVEFQSKGSVAAAIALRGTLFMDREIRI 323
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 31/125 (24%)
Query: 72 PPNSNNLLNLSIEEKKEADLRSIYVGNVDYGATAEELESHFHGCGSVNRVTILCNKFDG- 130
P L ++ + +E D R+++VGN+ LE F CG + V I +G
Sbjct: 112 PHGRKKQLRHALHQNEEEDSRTVFVGNLVNDVKRRVLEKVFKTCGPIESVRIRAQALEGE 171
Query: 131 ----------HPKG--------------------FAYIEFADKDSVQTAMAMDESLFRGR 160
PKG AY+ F DK S++ A+ + + GR
Sbjct: 172 KDLNGGEATVQPKGVGRAIRVLRGDVKKGEQYSAVAYVLFKDKSSIKEALDKNGVVVEGR 231
Query: 161 QIKVN 165
I V
Sbjct: 232 HIVVT 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,318,826,909
Number of Sequences: 23463169
Number of extensions: 136771779
Number of successful extensions: 583754
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7489
Number of HSP's successfully gapped in prelim test: 7689
Number of HSP's that attempted gapping in prelim test: 563387
Number of HSP's gapped (non-prelim): 23666
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)