BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1354
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|194890272|ref|XP_001977279.1| GG18336 [Drosophila erecta]
gi|190648928|gb|EDV46206.1| GG18336 [Drosophila erecta]
Length = 1100
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV LLK+L LD D+E NTVDQ+QGRDKS+I+YS + T
Sbjct: 959 LKSGFEASRIGVIAPYRAQVELLKKLASKLDTDLECNTVDQFQGRDKSLIIYSCSKTGGG 1018
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD+Q +
Sbjct: 1019 FTDMERSREAEILEDQRRLTVAITRAKNKLILLGDIQCL 1057
>gi|307188367|gb|EFN73136.1| DNA2-like helicase [Camponotus floridanus]
Length = 1167
Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 71/87 (81%), Gaps = 5/87 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSST----CTSKSK 60
+G+ +IGVIA Y Q++LLK++LDK++E+NTVDQYQGRDK +ILYS T C +K K
Sbjct: 1030 AGVCGRNIGVIAPYNAQINLLKKILDKEVEVNTVDQYQGRDKDVILYSCTKSTECNTK-K 1088
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E +IL+D++RLTVAI+RA+HKL+I+ D
Sbjct: 1089 EFEILDDQRRLTVAITRARHKLVIISD 1115
>gi|156545481|ref|XP_001606961.1| PREDICTED: DNA2-like helicase-like [Nasonia vitripennis]
Length = 1191
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCT----SKSKE 61
GI T IGVIA YR QV LL++++ DIE+NTVDQYQGRDKS+I+YS + + +K +E
Sbjct: 1063 GIETQTIGVIAPYRVQVHLLRKVVPNDIEVNTVDQYQGRDKSVIIYSCSKSISKDTKIQE 1122
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
IL D++RLTVA++RAKHKLII+GD+ +
Sbjct: 1123 FDILEDQQRLTVAVTRAKHKLIIIGDVNTL 1152
>gi|195446960|ref|XP_002071002.1| GK25369 [Drosophila willistoni]
gi|194167087|gb|EDW81988.1| GK25369 [Drosophila willistoni]
Length = 1107
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 14/103 (13%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L G + +GVIA YR QV LL++L LD++IE NTVDQYQGRDK +I+YS T
Sbjct: 962 LAIGYDANRLGVIAPYRAQVELLRKLGNALDQNIEFNTVDQYQGRDKDLIIYSCAKTGAI 1021
Query: 57 --------SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ES+IL D++RLTVAI+RAKHKLIILGD++ +
Sbjct: 1022 PLDGNEQMERSRESEILEDQRRLTVAITRAKHKLIILGDVKCL 1064
>gi|195481811|ref|XP_002101789.1| GE17824 [Drosophila yakuba]
gi|194189313|gb|EDX02897.1| GE17824 [Drosophila yakuba]
Length = 1098
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV LLK+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 957 LKSGFEAARIGVIAPYRAQVELLKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1016
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1017 FSNMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1055
>gi|332029552|gb|EGI69441.1| DNA2-like helicase [Acromyrmex echinatior]
Length = 1030
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKS---KE 61
+G+ +IG+IA Y ++LLK+++DK++E+NTVDQYQGRDK +ILYS T + +S KE
Sbjct: 895 AGVCARNIGIIAPYNAHINLLKKVIDKEVEVNTVDQYQGRDKDVILYSCTKSVESDTKKE 954
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
+IL+D++RLTVAI+RA+HKLII+ D
Sbjct: 955 FEILDDQRRLTVAITRARHKLIIIAD 980
>gi|195350587|ref|XP_002041821.1| GM11399 [Drosophila sechellia]
gi|194123626|gb|EDW45669.1| GM11399 [Drosophila sechellia]
Length = 1100
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 959 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1018
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1019 FSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1057
>gi|24640932|ref|NP_727386.1| CG2990, isoform B [Drosophila melanogaster]
gi|22833065|gb|AAN09623.1| CG2990, isoform B [Drosophila melanogaster]
gi|242118022|gb|ACS78060.1| FI06813p [Drosophila melanogaster]
Length = 1100
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 959 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1018
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1019 FSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1057
>gi|195566007|ref|XP_002106584.1| GD16967 [Drosophila simulans]
gi|194203965|gb|EDX17541.1| GD16967 [Drosophila simulans]
Length = 1100
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 959 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1018
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1019 FSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1057
>gi|161077698|ref|NP_001096933.1| CG2990, isoform C [Drosophila melanogaster]
gi|158031772|gb|AAF46543.2| CG2990, isoform C [Drosophila melanogaster]
Length = 1099
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 958 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1017
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1018 FSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1056
>gi|195116221|ref|XP_002002654.1| GI17500 [Drosophila mojavensis]
gi|193913229|gb|EDW12096.1| GI17500 [Drosophila mojavensis]
Length = 1113
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 11/100 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCT---- 56
L +G IGVIA YR QV LL++L + +E NTVDQYQGRDK +I+YS T T
Sbjct: 970 LQAGYDASRIGVIAPYRAQVELLRKLGEHLSGVEFNTVDQYQGRDKDLIIYSCTKTGSTA 1029
Query: 57 -----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ES+IL D++RLTVAI+RAKHKLI+LGD++ +
Sbjct: 1030 ADQGMERSRESEILEDQRRLTVAITRAKHKLILLGDIKCL 1069
>gi|322800176|gb|EFZ21261.1| hypothetical protein SINV_05223 [Solenopsis invicta]
Length = 1235
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKS---KE 61
+G+ +IG+IA Y N +LL++++DK++E+NTVDQYQGRDK +ILYS T + + KE
Sbjct: 1090 AGVCARNIGIIAPYNNHKNLLRKIIDKEVEVNTVDQYQGRDKDVILYSCTKSVEDNTKKE 1149
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
+IL+D++RLTVAI+RA+HKLII+ D
Sbjct: 1150 FEILDDQRRLTVAITRARHKLIIIAD 1175
>gi|323301218|gb|ADX35951.1| RE16268p [Drosophila melanogaster]
Length = 1099
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 958 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1017
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+R K+KLI+LGD++ +
Sbjct: 1018 FSDMERSREAEILEDQRRLTVAITRGKNKLILLGDIKCL 1056
>gi|195030502|ref|XP_001988107.1| GH10987 [Drosophila grimshawi]
gi|193904107|gb|EDW02974.1| GH10987 [Drosophila grimshawi]
Length = 1110
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 11/99 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCT--- 56
L +G IGVIA YR QV LL R L KD +E NTVDQYQGRDK++I+YS T T
Sbjct: 969 LAAGYDARRIGVIAPYRAQVELL-RQLGKDLNGVEFNTVDQYQGRDKNLIIYSCTKTGSS 1027
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+E++IL D++RLTVAI+RAKHKLI+LGD+ +
Sbjct: 1028 TDSAERSREAEILEDQRRLTVAITRAKHKLILLGDVSCL 1066
>gi|194746818|ref|XP_001955851.1| GF24887 [Drosophila ananassae]
gi|190623133|gb|EDV38657.1| GF24887 [Drosophila ananassae]
Length = 1092
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L+K+L LD +E NTVDQYQGRDK +I+YS + T
Sbjct: 954 LKSGFDASQIGVIAPYRAQVELVKKLVSKLDPILECNTVDQYQGRDKDLIIYSCSKTGSR 1013
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ES+IL D++RLTVAI+RAK KLI++GD++ +
Sbjct: 1014 VLDMERSRESEILEDQRRLTVAITRAKCKLILMGDIKCL 1052
>gi|357631656|gb|EHJ79125.1| hypothetical protein KGM_15469 [Danaus plexippus]
Length = 1157
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 9/94 (9%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKS---- 59
+GI IGVIA YR+QV+LLKR+LD +E +TVDQ+QGRDKS+I+YS CT K
Sbjct: 1034 AGISASDIGVIAPYRDQVTLLKRVLDGTQVEASTVDQFQGRDKSVIIYS--CTRKDDNLR 1091
Query: 60 --KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K++++LND++RL V+++RAKHK I++G+++ +
Sbjct: 1092 KVKDNEVLNDKRRLAVSVTRAKHKFIVIGNIRAL 1125
>gi|195385250|ref|XP_002051319.1| GJ15173 [Drosophila virilis]
gi|194147776|gb|EDW63474.1| GJ15173 [Drosophila virilis]
Length = 1115
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 11/91 (12%)
Query: 12 IGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCT---------SKSK 60
IGVIA YR QV LL++L + +E NTVDQYQGRDK++I+YS T T +S+
Sbjct: 981 IGVIAPYRAQVELLRKLGEHMTGVEFNTVDQYQGRDKNLIIYSCTKTGGTAAELSMERSR 1040
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E++IL D++RLTVAI+RAKHKLI+LGD+ +
Sbjct: 1041 EAEILEDQRRLTVAITRAKHKLILLGDVNCL 1071
>gi|30089668|gb|AAP20828.1| LD18775p [Drosophila melanogaster]
Length = 1054
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 10/94 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCT--- 56
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+YS + T
Sbjct: 959 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1018
Query: 57 ----SKSKESKILNDRKRLTVAISRAKHKLIILG 86
+S+E++IL D++RLTVAI+RAK+KLI+LG
Sbjct: 1019 FSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1052
>gi|195164399|ref|XP_002023035.1| GL16389 [Drosophila persimilis]
gi|194105097|gb|EDW27140.1| GL16389 [Drosophila persimilis]
Length = 930
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 10/90 (11%)
Query: 12 IGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCTSKS-------KE 61
+GVIA YR QV LL+RL LD +E NTVDQYQGRDK+II+YS T T + +
Sbjct: 795 VGVIAPYRAQVELLRRLGGRLDSRVEFNTVDQYQGRDKNIIIYSCTKTGRDPTEKKRCRA 854
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++IL D++RLTVAI+RAK KLIILGD+ +
Sbjct: 855 AEILEDKRRLTVAITRAKQKLIILGDVTCL 884
>gi|125980785|ref|XP_001354415.1| GA15562 [Drosophila pseudoobscura pseudoobscura]
gi|54642723|gb|EAL31468.1| GA15562 [Drosophila pseudoobscura pseudoobscura]
Length = 1113
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 10/90 (11%)
Query: 12 IGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCTSKS-------KE 61
+GVIA YR QV LL+RL LD +E NTVDQYQGRDK+II+YS T T + +
Sbjct: 978 VGVIAPYRAQVELLRRLGGRLDSRVEFNTVDQYQGRDKNIIIYSCTKTGRDPTEKKRCRA 1037
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++IL D++RLTVAI+RAK KLIILGD+ +
Sbjct: 1038 AEILEDKRRLTVAITRAKQKLIILGDVTCL 1067
>gi|328720400|ref|XP_001944621.2| PREDICTED: DNA2-like helicase-like isoform 1 [Acyrthosiphon pisum]
Length = 1116
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKR---LLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+ IGVIA YR QV+LLK + IE+NTVDQYQGRDK +I+YS T + SK+
Sbjct: 1006 GLSAKSIGVIAPYRAQVALLKNEMACVHSQIEVNTVDQYQGRDKEVIIYSCTKNTVSKDV 1065
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
IL+D++R+TVAI+RAKHKLI++GD+ +
Sbjct: 1066 GILSDKRRITVAITRAKHKLIMIGDVTTM 1094
>gi|157117716|ref|XP_001658902.1| DNA replication helicase dna2 [Aedes aegypti]
gi|108884569|gb|EAT48794.1| AAEL000201-PA, partial [Aedes aegypti]
Length = 1097
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 66/104 (63%), Gaps = 15/104 (14%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL-----DKDIEINTVDQYQGRDKSIILYSST--- 54
L GI IGVIA +R QV LL+ L D DIEINTVDQYQG+DK IILYS T
Sbjct: 950 LQCGIDGSSIGVIAPFRAQVDLLRYYLTLIEKDLDIEINTVDQYQGKDKDIILYSCTKSN 1009
Query: 55 -------CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
TS E +IL D++RLTVAI+RAK KLII+GD Q +
Sbjct: 1010 NPDNADAQTSTPSEYEILEDQRRLTVAITRAKKKLIIVGDTQCL 1053
>gi|350411710|ref|XP_003489429.1| PREDICTED: DNA2-like helicase-like [Bombus impatiens]
Length = 1256
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSS----TCTSKSKES-KI 64
++IG+IA +R VSLLK+++ +DIEINTVDQYQGRDK II+YS T S +E ++
Sbjct: 1133 ENIGIIAPFRAHVSLLKKVVAEDIEINTVDQYQGRDKEIIIYSCAKSITNFSDIREDLEV 1192
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RLTVAI+RAKHKLI++ D + I
Sbjct: 1193 LGDHRRLTVAITRAKHKLIVVADKRTI 1219
>gi|340729548|ref|XP_003403062.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Bombus
terrestris]
Length = 1223
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSS----TCTSKSKES-KI 64
++IGVIA +R V+LLK+++ +DIEINTVDQYQGRDK II+YS T S +E ++
Sbjct: 1100 ENIGVIAPFRAHVNLLKKVVAEDIEINTVDQYQGRDKDIIIYSCAKSITNFSDIREDLEV 1159
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RLTVAI+RAKHKLI++ D + I
Sbjct: 1160 LGDHRRLTVAITRAKHKLIVIADKRTI 1186
>gi|270003111|gb|EEZ99558.1| hypothetical protein TcasGA2_TC000140 [Tribolium castaneum]
Length = 1146
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 10/98 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
++ G+ + IGVIATYR QVS + LL+K ++++TVDQ+QGRDKS+I+YS CT S +
Sbjct: 1022 ILGGVASSDIGVIATYRAQVSQITDLLEKYQVDVSTVDQFQGRDKSVIIYS--CTKSSAQ 1079
Query: 62 -------SKILNDRKRLTVAISRAKHKLIILGDLQVII 92
++L D++RLTVA++RAK KL+I+GD ++
Sbjct: 1080 VATNTLKYELLEDKRRLTVAVTRAKRKLLIVGDSSTLV 1117
>gi|383859278|ref|XP_003705122.1| PREDICTED: DNA2-like helicase-like [Megachile rotundata]
Length = 1155
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSK-----SKESKI 64
++IG+I YR QV+L K+++ +++EINTVDQYQGRDK II YS T +S ++ ++
Sbjct: 1032 NNIGIITPYRAQVNLAKKIIQENVEINTVDQYQGRDKEIIFYSCTRSSVKNNNIKEDLEV 1091
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L D +RLTVA++RAK KLII+ D
Sbjct: 1092 LGDHRRLTVAVTRAKCKLIIIAD 1114
>gi|402585359|gb|EJW79299.1| hypothetical protein WUBG_09793, partial [Wuchereria bancrofti]
Length = 217
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCT--SKSKESK 63
G+ + +GV++ YR V L+R++ IE+NTVDQYQGRDKSII+ S T +++++S+
Sbjct: 129 GLSENDLGVVSIYRYHVEQLRRIVQAGIEVNTVDQYQGRDKSIIILSFVWTDEAENRKSE 188
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VAI+RAKHKLI++G
Sbjct: 189 LLADCRRINVAITRAKHKLILVG 211
>gi|170577034|ref|XP_001893856.1| hypothetical protein Bm1_11930 [Brugia malayi]
gi|158599881|gb|EDP37309.1| hypothetical protein Bm1_11930 [Brugia malayi]
Length = 1038
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCT--SKSKESK 63
G+ +GVI+ YR V L+R++ IE+NTVDQYQGRDKSII+ S T +++++S+
Sbjct: 928 GLSESDLGVISIYRYHVEQLRRIVQAGIEVNTVDQYQGRDKSIIILSFVWTGEAENRKSE 987
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VAI+RAKHKLI++G
Sbjct: 988 LLADCRRINVAITRAKHKLIMVG 1010
>gi|170028839|ref|XP_001842302.1| DNA replication helicase dna2 [Culex quinquefasciatus]
gi|167877987|gb|EDS41370.1| DNA replication helicase dna2 [Culex quinquefasciatus]
Length = 1087
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 24/108 (22%)
Query: 6 GIPTDHIGVIATYRNQVSLLKR---LLDK-------------DIEINTVDQYQGRDKSII 49
G+ + IG+IA +R QV LL+R LL K ++EINTVDQ+QGRDK +I
Sbjct: 932 GVDSSSIGIIAPFRAQVELLRRQFQLLKKFYESQKDTKDQAVNVEINTVDQFQGRDKDVI 991
Query: 50 LYSSTCT--------SKSKESKILNDRKRLTVAISRAKHKLIILGDLQ 89
YS T + K+ E ++L D KRLTVA++RAK KLII+GD +
Sbjct: 992 FYSCTKSVDPDQPEDKKASEYEVLEDHKRLTVAMTRAKQKLIIVGDTK 1039
>gi|324502018|gb|ADY40891.1| DNA2 helicase [Ascaris suum]
Length = 1123
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKS--KESKIL 65
P + IGVI+ YR +L++ ++K IE+NTVDQYQGRDK I++ S T + S++L
Sbjct: 975 PLEDIGVISVYRYHADMLRKTINKRIEVNTVDQYQGRDKRIVIVSLVWTKLDGVRRSELL 1034
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVIIA 93
+D +R+ VAI+RAKHKLI++G Q +++
Sbjct: 1035 SDARRINVAITRAKHKLILVGCRQSMMS 1062
>gi|240976860|ref|XP_002402497.1| DNA replication helicase DNA2, putative [Ixodes scapularis]
gi|215491194|gb|EEC00835.1| DNA replication helicase DNA2, putative [Ixodes scapularis]
Length = 207
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK-- 63
G+P +GV+A +R QV+LL+ L +E+ TVDQ+QG++++ +L S T + ++
Sbjct: 84 GLPEGEVGVVAPFRRQVALLRALCPLAVEVGTVDQFQGKERAAMLLSCTVARATTSAQDF 143
Query: 64 ---ILNDRKRLTVAISRAKHKLIILG 86
IL+D +RL+VA+SRA+HKL+++G
Sbjct: 144 GGSILDDERRLSVALSRARHKLVLVG 169
>gi|312080275|ref|XP_003142530.1| hypothetical protein LOAG_06948 [Loa loa]
Length = 1032
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCT--SKSKESK 63
G+P +G+I YR V L+ ++ +E+NTVDQYQGRDKS+I+ S +++++S+
Sbjct: 922 GLPKSDLGIICVYRYHVEQLRHIVQAGVEVNTVDQYQGRDKSVIVLSFVWAGEAENRKSE 981
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA++RAKHKLI++G
Sbjct: 982 LLADCRRINVAVTRAKHKLILVG 1004
>gi|393905454|gb|EFO21539.2| hypothetical protein LOAG_06948 [Loa loa]
Length = 1039
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCT--SKSKESK 63
G+P +G+I YR V L+ ++ +E+NTVDQYQGRDKS+I+ S +++++S+
Sbjct: 929 GLPKSDLGIICVYRYHVEQLRHIVQAGVEVNTVDQYQGRDKSVIVLSFVWAGEAENRKSE 988
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA++RAKHKLI++G
Sbjct: 989 LLADCRRINVAVTRAKHKLILVG 1011
>gi|410975287|ref|XP_003994064.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2
[Felis catus]
Length = 1107
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
PTD IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL + ++K
Sbjct: 934 PTD-IGIIAPYRQQLKIINDLLSHSSIGMVEVNTVDKYQGRDKSIILVTFVRSNKDGPLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 993 ELLRDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 1030
>gi|406603293|emb|CCH45172.1| DNA-binding protein SMUBP-2 [Wickerhamomyces ciferrii]
Length = 681
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L SG+ +HIG+I+ Y QVS LK+L+ D +EI+TVD +QGR+K +I+ + ++ +
Sbjct: 561 LKSGVKEEHIGIISPYNAQVSFLKKLIHNDWPRVEISTVDGFQGREKEVIILTLVRSNLN 620
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K+ L D KRL VAI+R K +L I+GD++ I
Sbjct: 621 KDVGFLKDEKRLNVAITRPKRQLCIVGDMETI 652
>gi|355684215|gb|AER97329.1| DNA replication helicase 2-like protein [Mustela putorius furo]
Length = 167
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 62 PSD-IGIIAPYRQQLKIINDLLFLSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPLG 120
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 121 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 158
>gi|150866204|ref|XP_001385714.2| hypothetical protein PICST_61353 [Scheffersomyces stipitis CBS
6054]
gi|149387460|gb|ABN67685.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 716
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L SG+ +HIGVI+ Y QVS+LK+++ K IEI+TVD +QGR+K +I+ S ++ +
Sbjct: 591 LESGVAPEHIGVISPYNAQVSVLKKIIQKGGSRIEISTVDGFQGREKEVIIISLVRSNDN 650
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+E L D++RL VA++R K +L ++GDL+++
Sbjct: 651 REIGFLKDKRRLNVAMTRPKRQLCVIGDLELM 682
>gi|301755892|ref|XP_002913804.1| PREDICTED: DNA2-like helicase-like, partial [Ailuropoda melanoleuca]
Length = 1069
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 942 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPLG 1000
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 1001 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 1038
>gi|119574681|gb|EAW54296.1| hCG32858 [Homo sapiens]
Length = 1068
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 992
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLG 1015
>gi|1531548|dbj|BAA07647.1| KIAA0083 [Homo sapiens]
Length = 1077
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 951 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 1009
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 1010 LLKDWRRLNVAITRAKHKLILLG 1032
>gi|345798967|ref|XP_546133.3| PREDICTED: DNA2-like helicase [Canis lupus familiaris]
Length = 1026
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 899 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 957
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 958 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 995
>gi|397520478|ref|XP_003830344.1| PREDICTED: DNA2-like helicase [Pan paniscus]
Length = 1060
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 992
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLG 1015
>gi|410222484|gb|JAA08461.1| DNA replication helicase 2 homolog [Pan troglodytes]
gi|410344145|gb|JAA40614.1| DNA replication helicase 2 homolog [Pan troglodytes]
Length = 1061
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 935 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 993
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLG 1016
>gi|332834188|ref|XP_001163213.2| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Pan
troglodytes]
gi|410263616|gb|JAA19774.1| DNA replication helicase 2 homolog [Pan troglodytes]
Length = 1061
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 935 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 993
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLG 1016
>gi|320461728|ref|NP_001073918.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Homo sapiens]
gi|119370373|sp|P51530.3|DNA2_HUMAN RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
Short=hDNA2; AltName: Full=DNA replication ATP-dependent
helicase-like homolog; Includes: RecName: Full=DNA
replication nuclease DNA2; Includes: RecName: Full=DNA
replication ATP-dependent helicase DNA2
gi|168274352|dbj|BAG09596.1| DNA2-like helicase [synthetic construct]
Length = 1060
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 992
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLG 1015
>gi|17533985|ref|NP_496515.1| Protein DNA-2, isoform a [Caenorhabditis elegans]
gi|3877086|emb|CAA90399.1| Protein DNA-2, isoform a [Caenorhabditis elegans]
Length = 1105
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKS-K 60
++SG+ IGV++ YR QV ++ +L+ D +E+NT+D YQGR+K +I++S T T+ S K
Sbjct: 992 VMSGVKPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTK 1051
Query: 61 ESKILNDRKRLTVAISRAKHKLIILG 86
+S++L D +R+ VA++RA+ KL+++G
Sbjct: 1052 KSELLKDERRVNVALTRARQKLVVVG 1077
>gi|281346967|gb|EFB22551.1| hypothetical protein PANDA_001621 [Ailuropoda melanoleuca]
Length = 1016
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 910 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPLG 968
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 969 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 1006
>gi|39793966|gb|AAH63664.1| DNA2 protein [Homo sapiens]
Length = 829
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 703 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 761
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 762 LLKDWRRLNVAITRAKHKLILLG 784
>gi|17533987|ref|NP_496516.1| Protein DNA-2, isoform b [Caenorhabditis elegans]
gi|5824500|emb|CAB54253.1| Protein DNA-2, isoform b [Caenorhabditis elegans]
Length = 1069
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKS-K 60
++SG+ IGV++ YR QV ++ +L+ D +E+NT+D YQGR+K +I++S T T+ S K
Sbjct: 956 VMSGVKPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTK 1015
Query: 61 ESKILNDRKRLTVAISRAKHKLIILG 86
+S++L D +R+ VA++RA+ KL+++G
Sbjct: 1016 KSELLKDERRVNVALTRARQKLVVVG 1041
>gi|284161290|ref|YP_003399913.1| DNA helicase [Archaeoglobus profundus DSM 5631]
gi|284011287|gb|ADB57240.1| DNA helicase [Archaeoglobus profundus DSM 5631]
Length = 636
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVI Y +QV LL+R++D +E+NTVD YQGR+K +I+ S +++ E
Sbjct: 529 AGVKREWIGVITPYEDQVDLLRRMID--VEVNTVDGYQGREKEVIIISFVRSNRRGEIGF 586
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RAK KLI++GD + +
Sbjct: 587 LEDLRRLNVALTRAKRKLIMVGDSKTL 613
>gi|268532354|ref|XP_002631305.1| C. briggsae CBR-DNA-2 protein [Caenorhabditis briggsae]
Length = 1071
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKS-KES 62
SG+ + IGV++ YR QV ++ ++ ++D+E+NT+D YQGR+K +I++S T T S K+S
Sbjct: 962 SGVKPNEIGVMSAYRKQVDHIRNVVKNEDLEVNTIDSYQGREKRVIIWSLTWTDNSDKKS 1021
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA++RA+ KL+++G
Sbjct: 1022 ELLRDERRINVALTRARQKLVVVG 1045
>gi|297301267|ref|XP_002808547.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Macaca
mulatta]
Length = 975
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 848 PSD-IGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 906
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 907 ELLKDWRRLNVAITRAKHKLILLG 930
>gi|341881179|gb|EGT37114.1| hypothetical protein CAEBREN_08313 [Caenorhabditis brenneri]
Length = 1044
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDI-EINTVDQYQGRDKSIILYSSTCTSKS-KES 62
SG+ IGV++ YR QV LK ++ D+ E+NT+D YQGR+K +I++S T T S K+S
Sbjct: 935 SGVKPHEIGVMSAYRRQVDQLKSFINNDLLEVNTIDSYQGREKRVIVWSLTYTETSTKKS 994
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA++RA+ KL+++G
Sbjct: 995 ELLRDERRINVALTRARQKLVVVG 1018
>gi|444725172|gb|ELW65750.1| DNA2-like helicase [Tupaia chinensis]
Length = 1693
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 11/103 (10%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ L+ + +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 890 PSD-IGIIAPYRQQLKIISDLMAQSSVGTVEVNTVDKYQGRDKSIILVSFVRSNKDGTLG 948
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQ-----VIIAIVNCPNT 100
++L D +RL VAI+RAKHKLI+LG + I V C N+
Sbjct: 949 ELLKDWRRLNVAITRAKHKLILLGVMSPLAGATFIIWVRCENS 991
>gi|402880646|ref|XP_003903909.1| PREDICTED: DNA2-like helicase [Papio anubis]
Length = 1061
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLARSSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
>gi|149625513|ref|XP_001520571.1| PREDICTED: DNA2-like helicase [Ornithorhynchus anatinus]
Length = 597
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
L +G + IG+IA YR Q+ ++ LL D +E+NTVD+YQGRDKSIIL S +K
Sbjct: 468 LKAGCKSSDIGIIAPYRQQLKIITDLLMCSSDVMVEVNTVDKYQGRDKSIILVSFVRNNK 527
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 528 DGTLGDLLKDWRRLNVAITRAKHKLILLG 556
>gi|351702489|gb|EHB05408.1| DNA2-like helicase [Heterocephalus glaber]
Length = 1000
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDK IIL S ++K+
Sbjct: 874 PSD-IGIIAPYRQQLKIISDLLTRSSFGMVEVNTVDKYQGRDKRIILVSFVRSNKNGTLG 932
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 933 ELLKDWRRLNVAITRAKHKLILLG 956
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 59/86 (68%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IG+I Y +QV L++ L+ ++IE++TVD YQGR+K +I+ S ++K E L
Sbjct: 543 GVKEEWIGIITPYDDQVDLIRSLVGEEIEVHTVDGYQGREKEVIVLSFVRSNKEDELGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
D +RL VA++RAK KLI +GD + +
Sbjct: 603 TDLRRLNVALTRAKRKLIAIGDSETL 628
>gi|34783461|gb|AAH41115.1| DNA2 protein [Homo sapiens]
Length = 435
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 309 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 367
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 368 LLKDWRRLNVAITRAKHKLILLG 390
>gi|20380180|gb|AAH28188.1| DNA2 protein [Homo sapiens]
Length = 378
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++ +
Sbjct: 259 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNNDGTVGE 317
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 318 LLKDWRRLNVAITRAKHKLILLG 340
>gi|390343708|ref|XP_796771.3| PREDICTED: DNA2-like helicase-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 882
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD------KDIEINTVDQYQGRDKSIILYS-STCTS 57
+G IGVI+ YR Q LL L K +E+NTVD+YQGRDK +I+ S S +
Sbjct: 757 AGCTAAQIGVISPYRRQCQLLTSTLADLGSKVKSLEVNTVDKYQGRDKDVIVMSFSHSQT 816
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S+ ILND +RL VA++RAKHKL+++G L+ +
Sbjct: 817 DSQGGSILNDLRRLNVAMTRAKHKLLLIGSLKCL 850
>gi|390343706|ref|XP_003725947.1| PREDICTED: DNA2-like helicase-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 769
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD------KDIEINTVDQYQGRDKSIILYS-STCTS 57
+G IGVI+ YR Q LL L K +E+NTVD+YQGRDK +I+ S S +
Sbjct: 644 AGCTAAQIGVISPYRRQCQLLTSTLADLGSKVKSLEVNTVDKYQGRDKDVIVMSFSHSQT 703
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S+ ILND +RL VA++RAKHKL+++G L+ +
Sbjct: 704 DSQGGSILNDLRRLNVAMTRAKHKLLLIGSLKCL 737
>gi|341895577|gb|EGT51512.1| hypothetical protein CAEBREN_07745 [Caenorhabditis brenneri]
Length = 1069
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDI-EINTVDQYQGRDKSIILYSSTCTSKS-KES 62
SG+ IGV++ YR QV LK + D+ E+NT+D YQGR+K +I++S T T S K+S
Sbjct: 960 SGVKPHEIGVMSAYRRQVDQLKSFIKNDLLEVNTIDSYQGREKRVIVWSLTYTETSTKKS 1019
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA++RA+ KL+++G
Sbjct: 1020 ELLRDERRINVALTRARQKLVVVG 1043
>gi|432106707|gb|ELK32359.1| DNA2-like helicase [Myotis davidii]
Length = 1054
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIILVSFVRSNKDGTLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
>gi|334313841|ref|XP_001369134.2| PREDICTED: DNA2-like helicase [Monodelphis domestica]
Length = 1038
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P D IG+IA YR Q+ ++ LL+ +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 925 PLD-IGIIAPYRQQLKIITHLLNHSSVNTVEVNTVDKYQGRDKSIILVSFVRSNKDGNLG 983
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL++LG
Sbjct: 984 ELLKDWRRLNVAITRAKHKLVLLG 1007
>gi|31657176|gb|AAH53574.1| DNA2 protein [Homo sapiens]
Length = 494
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE-SK 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L S ++K +
Sbjct: 368 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 426
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 427 LLKDWRRLNVAITRAKHKLILLG 449
>gi|308510272|ref|XP_003117319.1| CRE-DNA-2 protein [Caenorhabditis remanei]
gi|308242233|gb|EFO86185.1| CRE-DNA-2 protein [Caenorhabditis remanei]
Length = 1084
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCT-SKSKES 62
SG+ + IGV++ YR QV +K ++ D +E+NT+D YQGR+K +I++S T T + SK+S
Sbjct: 975 SGVKSSEIGVMSAYRKQVDHIKTVVQNDSLEVNTIDSYQGREKRVIIWSLTWTDNSSKKS 1034
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA++RA+ K++++G
Sbjct: 1035 ELLRDERRINVALTRARQKIVVVG 1058
>gi|395501406|ref|XP_003755086.1| PREDICTED: DNA2-like helicase [Sarcophilus harrisii]
Length = 1054
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 932 PSD-IGVIAPYRQQLKIITDLLTHFSVSTVEVNTVDKYQGRDKSIILVSFVRSNKDGTLG 990
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL++LG
Sbjct: 991 ELLKDWRRLNVAITRAKHKLVLLG 1014
>gi|327277984|ref|XP_003223743.1| PREDICTED: DNA2-like helicase-like [Anolis carolinensis]
Length = 1099
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSST-CTSKSKES 62
P+D IGVI+ YR+Q+ ++ L+ +E+NTVD+YQGRDKSII+ S S K
Sbjct: 949 PSD-IGVISPYRHQLKVITDLMTSSQISKVEVNTVDKYQGRDKSIIIVSFVRSNSDGKPG 1007
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL++LG
Sbjct: 1008 ELLKDWRRLNVAITRAKHKLVMLG 1031
>gi|329112570|ref|NP_001179731.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Bos taurus]
Length = 1061
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI++ S +++
Sbjct: 934 PSD-IGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLSRYPPLGKL 1030
>gi|390472695|ref|XP_002807491.2| PREDICTED: DNA2-like helicase [Callithrix jacchus]
Length = 1088
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 961 PSD-IGIIAPYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 1019
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 1020 ELLKDWRRLNVAITRAKHKLILLG 1043
>gi|383416283|gb|AFH31355.1| DNA2-like helicase [Macaca mulatta]
Length = 1061
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
>gi|426255660|ref|XP_004021466.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Ovis
aries]
Length = 1062
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 15/107 (14%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSII+ S +++
Sbjct: 935 PSD-IGIIAPYRQQLKVINDLLAHSSVGMVEVNTVDRYQGRDKSIIIVSFVRSNEDGTLG 993
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
++L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 994 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLSRYPPLGKL 1031
>gi|338716826|ref|XP_001502648.3| PREDICTED: DNA2-like helicase [Equus caballus]
Length = 1062
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G +G+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 931 AGCNPSAVGIIAPYRQQLKIINDLLARSSVGPVEVNTVDKYQGRDKSIILVSFVRSNKDG 990
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 991 TVGELLKDWRRLNVAITRAKHKLILLG 1017
>gi|395741723|ref|XP_002820937.2| PREDICTED: DNA2-like helicase-like, partial [Pongo abelii]
Length = 512
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 10/95 (10%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 385 PSD-IGIIAPYRQQLKIINDLLARSSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 443
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNC 97
++L D +RL VAI+RAKHKLI+LG + +NC
Sbjct: 444 ELLKDWRRLNVAITRAKHKLILLG----CVPSLNC 474
>gi|448511934|ref|XP_003866635.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
gi|380350973|emb|CCG21196.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
Length = 669
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
SG+P IG+IA Y QV LLK+ L D IE++TVD +QGR+K +I+ + ++ ++
Sbjct: 540 SGVPPQDIGIIAPYAAQVQLLKKQLGPDSLIEVSTVDGFQGREKEVIILTLVRSNDERDV 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L++ +RL VAI+R K +L ++GDLQ++
Sbjct: 600 GFLSEERRLNVAITRPKRQLCVIGDLQLM 628
>gi|37359766|dbj|BAC97861.1| mKIAA0083 protein [Mus musculus]
Length = 1078
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 951 PSD-IGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 1009
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VA++RAKHKLI+LG +
Sbjct: 1010 ELLKDWRRLNVALTRAKHKLILLGSV 1035
>gi|148700123|gb|EDL32070.1| DNA2 DNA replication helicase 2-like (yeast) [Mus musculus]
Length = 998
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 871 PSD-IGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 929
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VA++RAKHKLI+LG +
Sbjct: 930 ELLKDWRRLNVALTRAKHKLILLGSV 955
>gi|26390571|dbj|BAC25919.1| unnamed protein product [Mus musculus]
Length = 1062
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 935 PSD-IGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 993
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VA++RAKHKLI+LG +
Sbjct: 994 ELLKDWRRLNVALTRAKHKLILLGSV 1019
>gi|283837769|ref|NP_796346.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Mus musculus]
gi|119368660|sp|Q6ZQJ5.2|DNA2_MOUSE RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1062
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 935 PSD-IGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 993
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VA++RAKHKLI+LG +
Sbjct: 994 ELLKDWRRLNVALTRAKHKLILLGSV 1019
>gi|403274109|ref|XP_003928831.1| PREDICTED: DNA2-like helicase [Saimiri boliviensis boliviensis]
Length = 911
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 10/95 (10%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 784 PSD-IGIIAPYRQQLKIISDLLAHSSVGMVEVNTVDKYQGRDKSIILVSFVRSNKDGTVG 842
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNC 97
++L D +RL VAI+RAKHKLI+LG + +NC
Sbjct: 843 ELLKDWRRLNVAITRAKHKLILLG----CVPSLNC 873
>gi|344274563|ref|XP_003409084.1| PREDICTED: DNA2-like helicase [Loxodonta africana]
Length = 1062
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKSIIL S ++K +
Sbjct: 935 PSD-IGIIAPYRQQLKTINDLLARSSVGLVEVNTVDKYQGRDKSIILVSFVRSNKDGDLG 993
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL++LG
Sbjct: 994 ELLKDWRRLNVAITRAKHKLVLLG 1017
>gi|355562558|gb|EHH19152.1| hypothetical protein EGK_19800, partial [Macaca mulatta]
gi|355782889|gb|EHH64810.1| hypothetical protein EGM_18123, partial [Macaca fascicularis]
Length = 318
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSI+L S ++K
Sbjct: 198 PSD-IGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVG 256
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 257 ELLKDWRRLNVAITRAKHKLILLG 280
>gi|149043918|gb|EDL97369.1| rCG60675 [Rattus norvegicus]
Length = 991
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 867 PSD-IGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 925
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 926 ELLKDWRRLNVAITRAKHKLILLGSV 951
>gi|354477694|ref|XP_003501054.1| PREDICTED: DNA2-like helicase [Cricetulus griseus]
Length = 1080
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G +IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKS++L S ++K
Sbjct: 949 AGCSPSNIGIIAPYRQQLRIINDLLACSSVGMVEVNTVDKYQGRDKSLVLVSFVRSNKDG 1008
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 1009 TLGELLKDWRRLNVAITRAKHKLILLGSV 1037
>gi|350592782|ref|XP_003483536.1| PREDICTED: DNA2-like helicase [Sus scrofa]
Length = 841
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 11 HIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-SKIL 65
+IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S +++ ++L
Sbjct: 716 NIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSFVRSNRDGTLGELL 775
Query: 66 NDRKRLTVAISRAKHKLIILG 86
D +RL VAI+RAKHKLI+LG
Sbjct: 776 KDWRRLNVAITRAKHKLILLG 796
>gi|392338371|ref|XP_002725876.2| PREDICTED: DNA2-like helicase [Rattus norvegicus]
Length = 1059
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 932 PSD-IGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 990
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 991 ELLKDWRRLNVAITRAKHKLILLGSV 1016
>gi|408407614|sp|D3ZG52.1|DNA2_RAT RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1059
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 932 PSD-IGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 990
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 991 ELLKDWRRLNVAITRAKHKLILLGSV 1016
>gi|392355327|ref|XP_241671.6| PREDICTED: DNA2-like helicase [Rattus norvegicus]
Length = 1059
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 932 PSD-IGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 990
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 991 ELLKDWRRLNVAITRAKHKLILLGSV 1016
>gi|408360056|sp|Q5ZKG3.2|DNA2_CHICK RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent
helicase-like homolog; Includes: RecName: Full=DNA
replication nuclease DNA2; Includes: RecName: Full=DNA
replication ATP-dependent helicase DNA2
Length = 992
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+I+ YR+Q+ L+ RL + +E+NT+D+YQGRDKSII+ S S +
Sbjct: 869 PSD-IGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIIIVSFVRNSNDENLG 927
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI++G
Sbjct: 928 ALLKDWRRLNVAITRAKHKLIMVG 951
>gi|57529868|ref|NP_001006497.1| DNA replication ATP-dependent helicase/nuclease DNA2 [Gallus
gallus]
gi|53130966|emb|CAG31780.1| hypothetical protein RCJMB04_11a16 [Gallus gallus]
Length = 992
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+I+ YR+Q+ L+ RL + +E+NT+D+YQGRDKSII+ S S +
Sbjct: 869 PSD-IGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIIIVSFVRNSNDENLG 927
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI++G
Sbjct: 928 ALLEDWRRLNVAITRAKHKLIMVG 951
>gi|19483918|gb|AAH25182.1| Dna2 protein [Mus musculus]
Length = 800
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL S +++
Sbjct: 673 PSD-IGVIAPYRQQLRIISDLLAQSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 731
Query: 63 KILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VA++RAKHKLI+LG +
Sbjct: 732 ELLKDWRRLNVALTRAKHKLILLGSV 757
>gi|296472072|tpg|DAA14187.1| TPA: DNA replication helicase 2 homolog [Bos taurus]
Length = 1137
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI++ S +++
Sbjct: 1010 PSD-IGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 1068
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 1069 ELLKDWRRLNVAITRAKHKLILLG 1092
>gi|344304991|gb|EGW35223.1| hypothetical protein SPAPADRAFT_53535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 685
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+ IGVIA Y QV LLK+ + + +IEI+TVD +QGR+K +I+ + +++S+
Sbjct: 555 LSDGVQPKDIGVIAPYAAQVQLLKKQMGPETEIEISTVDGFQGREKEVIILTLVRSNESR 614
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L+D++RL VAI+R K +L ++GDL+++
Sbjct: 615 EIGFLSDQRRLNVAITRPKRQLCVIGDLELM 645
>gi|158284526|ref|XP_001687806.1| AGAP004685-PB [Anopheles gambiae str. PEST]
gi|157021006|gb|EDO64843.1| AGAP004685-PB [Anopheles gambiae str. PEST]
Length = 951
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 46/131 (35%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK------------------------------- 31
L +G+ + IG+IA +R QV L+++L+ K
Sbjct: 775 LQAGVEPESIGIIAPFRAQVELIRKLMKKLFEKQKYTRHSSSSNHNVIYTKENVEQLNHT 834
Query: 32 -DIEINTVDQYQGRDKSIILYSSTCTS---------KSKES-----KILNDRKRLTVAIS 76
+IE+NT+DQ+QG+DK IIL+S T +S K KE +IL+D+ RLTVAI+
Sbjct: 835 CNIEVNTIDQFQGKDKKIILFSCTKSSNLSDDIWINKGKERSSHGYEILSDKSRLTVAIT 894
Query: 77 RAKHKLIILGD 87
RAK KLII+GD
Sbjct: 895 RAKEKLIIIGD 905
>gi|158284524|ref|XP_307265.4| AGAP004685-PA [Anopheles gambiae str. PEST]
gi|157021005|gb|EAA03204.4| AGAP004685-PA [Anopheles gambiae str. PEST]
Length = 1130
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 46/131 (35%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK------------------------------- 31
L +G+ + IG+IA +R QV L+++L+ K
Sbjct: 954 LQAGVEPESIGIIAPFRAQVELIRKLMKKLFEKQKYTRHSSSSNHNVIYTKENVEQLNHT 1013
Query: 32 -DIEINTVDQYQGRDKSIILYSSTCTS---------KSKES-----KILNDRKRLTVAIS 76
+IE+NT+DQ+QG+DK IIL+S T +S K KE +IL+D+ RLTVAI+
Sbjct: 1014 CNIEVNTIDQFQGKDKKIILFSCTKSSNLSDDIWINKGKERSSHGYEILSDKSRLTVAIT 1073
Query: 77 RAKHKLIILGD 87
RAK KLII+GD
Sbjct: 1074 RAKEKLIIIGD 1084
>gi|431904169|gb|ELK09591.1| DNA2-like helicase [Pteropus alecto]
Length = 1094
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL S ++K
Sbjct: 932 PLD-IGIIAPYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIILVSFVRSNKDGTLG 990
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 991 ELLKDWRRLNVAITRAKHKLILLG 1014
>gi|344247613|gb|EGW03717.1| DNA2-like helicase [Cricetulus griseus]
Length = 767
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G +IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKS++L S ++K
Sbjct: 636 AGCSPSNIGIIAPYRQQLRIINDLLACSSVGMVEVNTVDKYQGRDKSLVLVSFVRSNKDG 695
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDL 88
++L D +RL VAI+RAKHKLI+LG +
Sbjct: 696 TLGELLKDWRRLNVAITRAKHKLILLGSV 724
>gi|408407704|sp|E1BMP7.3|DNA2_BOVIN RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1061
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI++ S +++
Sbjct: 934 PSD-IGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
>gi|292620199|ref|XP_687974.4| PREDICTED: si:ch211-1n9.7 [Danio rerio]
Length = 1397
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 12 IGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSST-CTSKSKESKILN 66
IGVIA YR Q+ ++ LL D +E+NTVD+YQGRDKS+I+ S ++ ++L
Sbjct: 1255 IGVIAPYRQQLKVISSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQ 1314
Query: 67 DRKRLTVAISRAKHKLIILG 86
D +RL VAI+RAKHKL++LG
Sbjct: 1315 DWRRLNVAITRAKHKLLMLG 1334
>gi|255727572|ref|XP_002548712.1| hypothetical protein CTRG_03009 [Candida tropicalis MYA-3404]
gi|240134636|gb|EER34191.1| hypothetical protein CTRG_03009 [Candida tropicalis MYA-3404]
Length = 1420
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+ IGV++ YR+QV LLKR L KDIE+ T DQ+QGRDK I+ S ++++
Sbjct: 1262 AGVEESQIGVMSVYRSQVLLLKRNLSLRKDIEVLTADQFQGRDKECIIISLVKSNENNNP 1321
Query: 63 -KILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAK KLIILG
Sbjct: 1322 GELLKDWRRLNVAITRAKSKLIILG 1346
>gi|348575708|ref|XP_003473630.1| PREDICTED: DNA2-like helicase-like [Cavia porcellus]
Length = 1061
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+IA YR Q+ +++ LL +E+NTVD+YQGRDK IIL S ++K
Sbjct: 934 PSD-IGIIAPYRQQLKIIRDLLPHSSLGTVEVNTVDKYQGRDKRIILVSFVRSNKDGTLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++ D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELWKDWRRLNVAITRAKHKLILLG 1016
>gi|326923414|ref|XP_003207931.1| PREDICTED: DNA2-like helicase-like [Meleagris gallopavo]
Length = 798
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+I+ YR+Q+ L+ RL + +E+NT+D+YQGRDKSII+ S S +
Sbjct: 675 PSD-IGIISPYRHQLKVITDLMARLKESRVEVNTIDKYQGRDKSIIIVSFVRNSNDENLG 733
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI++G
Sbjct: 734 ALLKDWRRLNVAITRAKHKLIMVG 757
>gi|242399980|ref|YP_002995405.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
gi|242266374|gb|ACS91056.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
Length = 716
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
GI + IG+I Y +QV ++ ++ D +IEI+TVD YQGR+K II+ S ++K E
Sbjct: 602 GIKKEWIGIITPYDDQVDSIRSIIQDDEIEIHTVDGYQGREKEIIILSLVRSNKKGELGF 661
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVII 92
L D +RL V+I+RAK KL+++GD + ++
Sbjct: 662 LMDLRRLNVSITRAKRKLVVIGDSETLV 689
>gi|156839982|ref|XP_001643676.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114297|gb|EDO15818.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 679
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S +P D IGVI+ Y Q SLLK L+ + IEI+TVD +QGR+K +I+ S ++ E
Sbjct: 560 SNVPQDAIGVISPYSAQTSLLKSLIQEQYPLIEISTVDGFQGREKEVIVLSLVRSNDKME 619
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VAISR K +L ++G+++V+
Sbjct: 620 VGFLRDDRRLNVAISRPKKQLCVIGNMEVL 649
>gi|298704766|emb|CBJ28362.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 679
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSST-CTSKS 59
++G +GVI+ YR+QV LL+ L +E+NT+D+YQGRDK +I+ S ++
Sbjct: 435 VAGFDLGGVGVISPYRSQVQLLQAELKPSFPALEVNTIDKYQGRDKKVIVVSFVRSNAEG 494
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +RL VA+SRAKHKL+++G L+ +
Sbjct: 495 TVGHLLRDWRRLNVALSRAKHKLLLVGSLRTL 526
>gi|222099668|ref|YP_002534236.1| DNA helicase [Thermotoga neapolitana DSM 4359]
gi|221572058|gb|ACM22870.1| DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 650
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 3 LIS-GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
LIS G+ + IGVI Y +QV L++ LL++ +E+++VD +QGR+K +I+ S ++K+ E
Sbjct: 539 LISMGVKEEWIGVITPYDDQVDLVRTLLEEKVEVHSVDGFQGREKEVIIISFVRSNKNGE 598
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI +GD
Sbjct: 599 IGFLEDLRRLNVSLTRAKRKLIAIGD 624
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IGVI Y +Q L+ ++ +DIE+ TVD YQGR+K II+ S +++ E L
Sbjct: 549 GVKPDWIGVITPYDDQRDLISSMVGEDIEVKTVDGYQGREKEIIVLSFVRSNRRGELGFL 608
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI +GD
Sbjct: 609 TDLRRLNVSLTRAKRKLIAVGD 630
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 56/82 (68%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI+ Y +Q L+ LL ++IE+ TVD YQGR+K +I+ S +++ E L
Sbjct: 548 GVKPEWIGVISPYDDQRDLISSLLPEEIEVKTVDGYQGREKEVIVLSFVRSNRKGELGFL 607
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI++GD
Sbjct: 608 KDLRRLNVSLTRAKRKLILIGD 629
>gi|403253185|ref|ZP_10919488.1| DNA helicase [Thermotoga sp. EMP]
gi|402811449|gb|EJX25935.1| DNA helicase [Thermotoga sp. EMP]
Length = 650
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E
Sbjct: 540 LSMGVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI GD
Sbjct: 600 GFLEDLRRLNVSLTRAKRKLIATGD 624
>gi|170288736|ref|YP_001738974.1| DNA helicase [Thermotoga sp. RQ2]
gi|170176239|gb|ACB09291.1| DNA helicase [Thermotoga sp. RQ2]
Length = 650
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E
Sbjct: 540 LSMGVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI GD
Sbjct: 600 GFLEDLRRLNVSLTRAKRKLIATGD 624
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ ++HIGVI+ Y +QV+ L+ LL D ++E+ TVD +QGR+K +I+ S +++ E
Sbjct: 422 GLRSEHIGVISPYEDQVNFLEELLKDFEVEVKTVDGFQGREKEVIIISFVRSNEKGEIGF 481
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L D +RL VA++RA+ KLI LG+
Sbjct: 482 LKDYRRLNVALTRARRKLITLGN 504
>gi|358367030|dbj|GAA83650.1| DNA replication helicase Dna2 [Aspergillus kawachii IFO 4308]
Length = 1659
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
SGIP IGVIA YR+Q+SLLK+ L + D+E++T D++QGRDK +I+ S ++ K
Sbjct: 1457 SGIPARSIGVIALYRSQLSLLKQNLSRYLPDLEMHTADKFQGRDKEVIILSCVRSNADKN 1516
Query: 62 -SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1517 VGDLLRDWRRVNVAFTRARTKLLVVG 1542
>gi|15644163|ref|NP_229212.1| helicase-related protein [Thermotoga maritima MSB8]
gi|418045468|ref|ZP_12683563.1| hypothetical protein ThemaDRAFT_0939 [Thermotoga maritima MSB8]
gi|4981975|gb|AAD36482.1|AE001793_12 helicase-related protein [Thermotoga maritima MSB8]
gi|351676353|gb|EHA59506.1| hypothetical protein ThemaDRAFT_0939 [Thermotoga maritima MSB8]
Length = 245
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E L
Sbjct: 138 GVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFL 197
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI GD
Sbjct: 198 EDLRRLNVSLTRAKRKLIATGD 219
>gi|15642780|ref|NP_227821.1| DNA helicase [Thermotoga maritima MSB8]
gi|4980488|gb|AAD35099.1|AE001689_5 DNA helicase, putative [Thermotoga maritima MSB8]
Length = 650
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E L
Sbjct: 543 GVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI GD
Sbjct: 603 EDLRRLNVSLTRAKRKLIATGD 624
>gi|418045943|ref|ZP_12684037.1| DNA helicase, partial [Thermotoga maritima MSB8]
gi|351675496|gb|EHA58656.1| DNA helicase, partial [Thermotoga maritima MSB8]
Length = 642
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E L
Sbjct: 543 GVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI GD
Sbjct: 603 EDLRRLNVSLTRAKRKLIATGD 624
>gi|148270052|ref|YP_001244512.1| putative DNA helicase [Thermotoga petrophila RKU-1]
gi|147735596|gb|ABQ46936.1| putative DNA helicase [Thermotoga petrophila RKU-1]
Length = 650
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IG+I Y +QV+L++ L++ +E+++VD +QGR+K +I+ S ++K+ E L
Sbjct: 543 GVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI GD
Sbjct: 603 EDLRRLNVSLTRAKRKLIATGD 624
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ ++ IGVI Y +Q L+ LL +++E+ TVD YQGR+K +I+ S ++K E L
Sbjct: 548 GVRSEWIGVITPYDDQRDLISSLLPEEVEVKTVDGYQGREKEVIVLSFVRSNKRGELGFL 607
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVIIA 93
D +RL V+++RAK KLI++GD + A
Sbjct: 608 KDLRRLNVSLTRAKRKLILIGDSSTLSA 635
>gi|380018808|ref|XP_003693313.1| PREDICTED: DNA2-like helicase-like [Apis florea]
Length = 1112
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES- 62
I D IG+IA YR V+LLK+++ KDIEINTVDQYQGRDK II+YS S +K E
Sbjct: 986 IELDEIGIIAPYRAHVNLLKKIIIKDIEINTVDQYQGRDKQIIIYSCAKSLLNNKDIEED 1045
Query: 63 -KILNDRKRLTVAISRAKHKLIILGD 87
++L D +RLTVAI+RAK KLII+ D
Sbjct: 1046 IEVLGDCRRLTVAITRAKCKLIIIAD 1071
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
GI + +GVI Y +Q L+ LL ++IE+ TVD YQGR+K +I+ S +++ E L
Sbjct: 548 GIKPEWVGVITPYDDQRDLISSLLPEEIEVKTVDGYQGREKEVIVLSFVRSNRKGELGFL 607
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI++GD
Sbjct: 608 KDLRRLNVSLTRAKRKLILIGD 629
>gi|432852842|ref|XP_004067412.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Oryzias latipes]
Length = 1318
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYS--STCTSKSKE 61
P+D +GVIA YR Q+ ++ LL +E+NTVD+YQGRDKS+I+ S + T +
Sbjct: 1177 PSD-VGVIAPYRQQLKTIQALLQSPTFSGVEVNTVDKYQGRDKSLIVLSFVRSNTEEGHL 1235
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL+++G
Sbjct: 1236 GELLKDWRRLNVAITRAKHKLLMVG 1260
>gi|312137189|ref|YP_004004526.1| DNA helicase [Methanothermus fervidus DSM 2088]
gi|311224908|gb|ADP77764.1| DNA helicase [Methanothermus fervidus DSM 2088]
Length = 666
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
SG+ TD IG+I Y +QV L ++ +E+NTVD YQGR+K II+ S ++K +
Sbjct: 550 SGVSTDDIGIITPYDDQVDYLSKI--AKVEVNTVDGYQGREKEIIIISMVRSNKKGKIGF 607
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL V+++RAK KL+I+GD + +
Sbjct: 608 LEDLRRLNVSLTRAKRKLVIIGDSETL 634
>gi|288930858|ref|YP_003434918.1| ATPase AAA [Ferroglobus placidus DSM 10642]
gi|288893106|gb|ADC64643.1| AAA ATPase [Ferroglobus placidus DSM 10642]
Length = 621
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P I I+ YR QV LLK ++ + +EI TVD +QGR+K +++++ T T + +
Sbjct: 496 AGVPEQEIACISPYRAQVELLKEVMGRSVEIGTVDAFQGREKDVVIFTVTAT---RNFRF 552
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
D RL VA +RA+ KLI++G+ + I
Sbjct: 553 AADPNRLNVAFTRARKKLIVVGNWRRI 579
>gi|150020793|ref|YP_001306147.1| putative DNA helicase [Thermosipho melanesiensis BI429]
gi|149793314|gb|ABR30762.1| putative DNA helicase [Thermosipho melanesiensis BI429]
Length = 643
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G + IGVI+ Y +QV L+ R D I++NTVD +QGR+K IIL S ++K+ E
Sbjct: 529 EGAKREWIGVISPYDDQVELI-RSFDLKIDVNTVDGFQGREKEIILISFVRSNKNGELGF 587
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVII 92
LND +RL V+++RAK KLI++G+ +I
Sbjct: 588 LNDLRRLNVSLTRAKRKLILIGNSNTLI 615
>gi|255729912|ref|XP_002549881.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
gi|240132950|gb|EER32507.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
Length = 705
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 61/89 (68%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ IG+I+ Y QV LLK+ + ++E++TVD +QGR+K +I+ S ++ +E
Sbjct: 577 LDSGVRPQDIGIISPYAAQVQLLKKKVVPEVEVHTVDGFQGREKEVIILSLVRSNDDREI 636
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L++++RL VAI+R K L I+GDL+++
Sbjct: 637 GFLSEQRRLNVAITRPKRHLCIVGDLELL 665
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +Q L+ L+ ++IE+ TVD YQGR+K +I+ S +++ E L
Sbjct: 544 GVKPEWIGVITPYDDQRDLISSLVPEEIEVRTVDGYQGREKEVIILSFVRSNERGEVGFL 603
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
D +RL V+++RAK KLI++GD + +
Sbjct: 604 KDLRRLNVSLTRAKRKLIVVGDSETL 629
>gi|391328044|ref|XP_003738503.1| PREDICTED: DNA2-like helicase-like [Metaseiulus occidentalis]
Length = 1204
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSS--TCTSKSKESK 63
G+ IGVI++Y +QV+ LK +L + +E +T+D+YQG++K +++ S T T + E++
Sbjct: 1092 GLSKADIGVISSYTDQVTCLKGILPEGVESSTIDRYQGKEKEVMIMSCVRTGTDATFENE 1151
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
I+ND KR+ VAISRA+ KLI++G
Sbjct: 1152 IMNDLKRINVAISRARSKLILVG 1174
>gi|152990986|ref|YP_001356708.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
gi|151422847|dbj|BAF70351.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
Length = 726
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L G+ T+ IG+I+ Y QV +K+L++ D IE+ TVD +QGR+K +I+ S ++++
Sbjct: 603 LSMGLKTEDIGIISPYAAQVKRIKKLVETDERIIEVKTVDGFQGREKEVIIISFVRSNEN 662
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVII 92
+ L D +RL VAI+RAK KLI +GD +I
Sbjct: 663 GKIGFLKDLRRLNVAITRAKRKLICIGDASTLI 695
>gi|344228571|gb|EGV60457.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 250
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
P D IGVI+ Y QVSLLKR+++ +EI+TVD +QGR+K +I+ S ++ S E L
Sbjct: 140 PQD-IGVISPYNAQVSLLKRIINNPAVEISTVDGFQGREKEVIIISLVRSNSSNEIGFLK 198
Query: 67 DRKRLTVAISRAKHKLIILGDLQVI 91
+R+R+ VA++R K +L ++GDL+++
Sbjct: 199 ERRRMNVAMTRPKRQLYVVGDLELL 223
>gi|281412067|ref|YP_003346146.1| DNA helicase [Thermotoga naphthophila RKU-10]
gi|281373170|gb|ADA66732.1| DNA helicase [Thermotoga naphthophila RKU-10]
Length = 650
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 59/85 (69%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L G+ + IG+I Y +QV+L++ L+++ +E+++VD +QGR+K +I+ S ++K+ E
Sbjct: 540 LSMGVKENWIGIITPYDDQVNLIRELIEEKVEVHSVDGFQGREKEVIIISFVRSNKNGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI GD
Sbjct: 600 GFLEDLRRLNVSLTRAKRKLIATGD 624
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +Q L++ LL +++E+ TVD YQGR+K +I+ S +++ E L
Sbjct: 546 GLNPEWIGVITPYDDQRDLIRSLLPEEVEVKTVDGYQGREKEVIVLSFVRSNRKGELGFL 605
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI++GD
Sbjct: 606 KDLRRLNVSLTRAKRKLILIGD 627
>gi|242018331|ref|XP_002429631.1| DNA replication helicase DNA2, putative [Pediculus humanus corporis]
gi|212514610|gb|EEB16893.1| DNA replication helicase DNA2, putative [Pediculus humanus corporis]
Length = 1157
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 18/106 (16%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTS 57
SL G +GVIA + +Q++LLK+ L ++E+NTVDQYQGRDK +I +S C
Sbjct: 1014 SLEFGTSETDVGVIAPFADQIALLKKKLRGSNLNNVELNTVDQYQGRDKEMIFFS--CGK 1071
Query: 58 KSK------------ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ +S++LND KR+TV ++RAK KL+++GD + +
Sbjct: 1072 ENRWNGSSSSSSEISKSELLNDLKRVTVTVTRAKRKLVVVGDRKTV 1117
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ HIG+I Y +QV LLK ++ ++D+EI +VD +QGR+K +I+ S + E
Sbjct: 538 GLKEKHIGIITPYDDQVDLLKSIIPNEDLEIKSVDGFQGREKEVIVISFVRANDRGELGF 597
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIA 93
L D +RL VAI+RAK KLII+G+ + + A
Sbjct: 598 LTDLRRLNVAITRAKRKLIIVGNSKTLRA 626
>gi|449504703|ref|XP_004176294.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication ATP-dependent
helicase/nuclease DNA2 [Taeniopygia guttata]
Length = 1059
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
P+D IG+I+ YR+Q+ + L+ K +E+NTVD+YQGRDKSII+ S S +
Sbjct: 936 PSD-IGIISPYRHQLKTITDLMAKWKENRVEVNTVDKYQGRDKSIIIVSFVRNSIDENLG 994
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKL+++G
Sbjct: 995 SLLKDWRRLNVAITRAKHKLVMVG 1018
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
GI + IGVI Y +Q L+ L++ D IE+ TVD YQGR+K +I+ S ++K E
Sbjct: 543 GIRPESIGVITPYDDQRDLISSLIENDEIEVKTVDGYQGREKEVIILSFVRSNKKGELGF 602
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIA 93
L D +RL V+++RAK KLI +GD + + A
Sbjct: 603 LTDLRRLNVSLTRAKRKLIAIGDSETLGA 631
>gi|406859104|gb|EKD12175.1| DNA replication factor Dna2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1710
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLK--RLLDKDIEINTVDQYQGRDKSIILYSSTCTSK 58
SL+S G+P IG++ YR+Q+SLLK L DIE++T D++QGRDK +I+ S +++
Sbjct: 1458 SLLSVGVPAASIGIMTHYRSQLSLLKDSMRLHPDIEMHTADRFQGRDKEVIVLSLVRSNE 1517
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+K ++L D +R+ VA +RAK KL+++G + ++
Sbjct: 1518 AKSIGELLKDWRRINVAFTRAKTKLLVIGSKETLMG 1553
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ HIG+I Y +QV LL+ +++ DIEI +VD +QGR+K +I+ S ++ + L
Sbjct: 545 GLKEKHIGIITPYDDQVDLLRSMIE-DIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFL 603
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+D +RL VAI+RAK KLI+LG+ + +
Sbjct: 604 DDLRRLNVAITRAKRKLIMLGNAKTL 629
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ HIG+I Y +QV LL+ +++ DIEI +VD +QGR+K +I+ S ++ + L
Sbjct: 545 GLKEKHIGIITPYDDQVDLLRSMIE-DIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFL 603
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+D +RL VAI+RAK KLI+LG+ + +
Sbjct: 604 DDLRRLNVAITRAKRKLIMLGNAKTL 629
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
GI IG+I Y QV LL+RLL++ D+E+ +VD +QGR+K +IL S ++ ++
Sbjct: 610 GIAPAQIGIITPYLAQVKLLRRLLEEFPDVEVKSVDGFQGREKEVILISFVRSNLAQSVG 669
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
++D +RL VA++RA+ KL+++GD
Sbjct: 670 FVSDPRRLNVAMTRARSKLLMIGD 693
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+L G+ HI VI Y++QV LL L +++EINTVD +QGR+K +++ S ++K +
Sbjct: 642 ALKLGLEQRHIAVITPYKDQVDLLNHLSRFENLEINTVDGFQGREKEVVMISLVRSNKHR 701
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VAI+R K KLII+GD I
Sbjct: 702 NIGFLRDLRRLNVAITRPKRKLIIIGDSNTI 732
>gi|410912104|ref|XP_003969530.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Takifugu rubripes]
Length = 1123
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYS--STCTSKSKE 61
P+D IGVIA YR Q+ + LL + E+NTVD+YQGRDKS+I+ S + T++
Sbjct: 975 PSD-IGVIAPYRQQLRTISGLLQSSVFTGVEVNTVDRYQGRDKSLIILSFVRSTTAEGTL 1033
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAK+KL+++G
Sbjct: 1034 GELLKDWRRLNVAITRAKNKLLMVG 1058
>gi|300709148|ref|XP_002996741.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
gi|239606064|gb|EEQ83070.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
Length = 618
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
IG+I Y +Q LLK L D+++EINTVD +QGR+K I+ S +++S + L+D KRL
Sbjct: 506 IGIITPYSSQAILLKSLFDENVEINTVDGFQGREKDFIILSLVRSNESGDYGFLDDYKRL 565
Query: 72 TVAISRAKHKLIILGDLQ 89
VAI+R+K L+++G+ Q
Sbjct: 566 NVAITRSKRGLVVVGNSQ 583
>gi|320580709|gb|EFW94931.1| Hexameric DNA polymerase alpha-associated DNA helicase A [Ogataea
parapolymorpha DL-1]
Length = 712
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTCTSKS 59
+ + IG+I+ Y QVS L++LL + DIEI+TVD +QGR+K +I+ S ++ S
Sbjct: 592 VKQEDIGIISPYSAQVSSLRKLLREETEHPFPDIEISTVDGFQGREKEVIILSLVRSNDS 651
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ LND +R+ V+ISRAK +L ++GD++ I
Sbjct: 652 HDVGFLNDYRRMNVSISRAKRQLCVVGDMETI 683
>gi|170030088|ref|XP_001842922.1| potentail helicase MOV-10 [Culex quinquefasciatus]
gi|167865928|gb|EDS29311.1| potentail helicase MOV-10 [Culex quinquefasciatus]
Length = 760
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
Query: 12 IGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I+ Y +QV LL+ LL+K DIE+ + +QYQGR+K I+L S T ++SK ++ LN+
Sbjct: 597 IGIISPYASQVRLLRNLLNKRHWSDIEVGSTEQYQGREKPIMLMS-TVRARSKSAEFLNN 655
Query: 68 RKRLTVAISRAKHKLIILGD 87
KR+ V+++RA+ +I++GD
Sbjct: 656 AKRINVSLTRAQALMIVVGD 675
>gi|148227244|ref|NP_001079231.1| DNA replication ATP-dependent helicase/nuclease DNA2 [Xenopus laevis]
gi|82105075|sp|Q8QHA5.1|DNA2_XENLA RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
gi|18845092|gb|AAL79550.1|AF474372_1 helicase [Xenopus laevis]
Length = 1053
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTS-KSKES 62
P+D IG+IA YR Q+ ++ + +E+NTVD+YQGRDKS+I+ S ++ K
Sbjct: 934 PSD-IGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA++RAKHKLI+LG
Sbjct: 993 DLLKDWRRLNVALTRAKHKLIMLG 1016
>gi|198433360|ref|XP_002125539.1| PREDICTED: similar to DNA2 DNA replication helicase 2-like (yeast)
[Ciona intestinalis]
Length = 1322
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSK 58
+G IG+IA +R Q+ ++ ++ +EINTVD+YQGRDKS+IL S + K
Sbjct: 1207 AGCSPSKIGIIAPFRKQLRAIEEKMNSIEENTTLVEINTVDKYQGRDKSVILLSFVRSKK 1266
Query: 59 SK-ESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNC 97
+ ++LND +RL V I+RAKHKL+++G + ++ C
Sbjct: 1267 EPLKGELLNDWRRLNVGITRAKHKLVMVGCTRSLLEYEPC 1306
>gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
gi|32397018|emb|CAD72321.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
Length = 763
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ D I VIA Y QV L+ LD D IEI+TVD +QGR+K ++L + T ++ E
Sbjct: 649 GVTGDQIAVIAPYAAQVRNLRMRLDLDGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 708
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+D++R VA++RAK KLI++GD
Sbjct: 709 LSDQRRSNVALTRAKRKLIVVGD 731
>gi|440713093|ref|ZP_20893698.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
gi|436442112|gb|ELP35280.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
Length = 735
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ D I VIA Y QV L+ LD D IEI+TVD +QGR+K ++L + T ++ E
Sbjct: 621 GVTGDQIAVIAPYAAQVRNLRMRLDLDGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 680
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+D++R VA++RAK KLI++GD
Sbjct: 681 LSDQRRSNVALTRAKRKLIVVGD 703
>gi|417303798|ref|ZP_12090840.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
gi|327539896|gb|EGF26498.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
Length = 735
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ D I VIA Y QV L+ LD D IEI+TVD +QGR+K ++L + T ++ E
Sbjct: 621 GVTGDQIAVIAPYAAQVRNLRMRLDLDGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 680
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+D++R VA++RAK KLI++GD
Sbjct: 681 LSDQRRSNVALTRAKRKLIVVGD 703
>gi|348534058|ref|XP_003454520.1| PREDICTED: DNA2-like helicase-like [Oreochromis niloticus]
Length = 1413
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYS--STCTSKSKE 61
P+D IGVIA YR Q+ + LL +E+NTVD+YQGRDKS+I+ S + +
Sbjct: 1283 PSD-IGVIAPYRQQLKTILALLQSPAFTGVEVNTVDRYQGRDKSLIILSFVRSTAEEGNL 1341
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAKHKL+++G
Sbjct: 1342 GELLKDWRRLNVAITRAKHKLLMVG 1366
>gi|327355031|gb|EGE83888.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1653
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 8/91 (8%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
S IS GIP IGV+ YR+Q+SLLK+ L D+E++T D++QGRDK II+ S C
Sbjct: 1428 SFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADRFQGRDKEIIIMS--CVRS 1485
Query: 59 SKE---SKILNDRKRLTVAISRAKHKLIILG 86
+ E ++L D +R+ VA +RA+ KL+I+G
Sbjct: 1486 NSERNVGELLRDWRRVNVAFTRARTKLLIVG 1516
>gi|429241027|ref|NP_596499.2| DNA replication endonuclease-helicase Dna2 [Schizosaccharomyces pombe
972h-]
gi|408360057|sp|Q9URU2.2|DNA2_SCHPO RecName: Full=DNA replication ATP-dependent helicase/nuclease dna2;
Includes: RecName: Full=DNA replication nuclease dna2;
Includes: RecName: Full=DNA replication ATP-dependent
helicase dna2
gi|5052396|gb|AAD38528.1|AF144384_1 Dna2p [Schizosaccharomyces pombe]
gi|347834381|emb|CAB38508.2| DNA replication endonuclease-helicase Dna2 [Schizosaccharomyces
pombe]
Length = 1397
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSST-CTSKSKES 62
G+ IG+I+ Y++QV LL + L +IEINTVD+YQGRDK IIL S SK+
Sbjct: 1232 GVKQSSIGIISIYKSQVELLSKNLKSFTEIEINTVDRYQGRDKDIILISFVRSNSKNLVG 1291
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L D RL VA+SRAK K I+ G L +
Sbjct: 1292 ELLRDWHRLNVALSRAKVKCIMFGSLSTL 1320
>gi|68487366|ref|XP_712454.1| hypothetical protein CaO19.8783 [Candida albicans SC5314]
gi|68487658|ref|XP_712310.1| hypothetical protein CaO19.1192 [Candida albicans SC5314]
gi|46433687|gb|EAK93119.1| hypothetical protein CaO19.1192 [Candida albicans SC5314]
gi|46433842|gb|EAK93270.1| hypothetical protein CaO19.8783 [Candida albicans SC5314]
Length = 1426
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKES- 62
G+ D IGV++ YR Q+S+LK+ L+ KD+EI T DQYQGRDK I+ S +++ K +
Sbjct: 1271 GVKEDEIGVMSFYRAQLSVLKKNLNNLKDLEILTADQYQGRDKECIIISLVRSNERKFAG 1330
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++ + +RL VA +RAK KLIILG
Sbjct: 1331 DLMKEYRRLNVATTRAKTKLIILG 1354
>gi|449131912|ref|ZP_21768086.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
gi|448888721|gb|EMB19023.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
Length = 734
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ D I VIA Y QV L+ LD D IEI+TVD +QGR+K ++L + T ++ E
Sbjct: 620 GVTGDQIAVIAPYAAQVRNLRMRLDLDGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 679
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+D++R VA++RAK KLI++GD
Sbjct: 680 LSDQRRSNVALTRAKRKLIVVGD 702
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDK---------DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+RL+ K I +NTVD +QG+++ IIL S ++ +
Sbjct: 541 VGVISPYRAQVQYLRRLIRKRESFKPYRHSISVNTVDGFQGQERDIILISLVRSNDQGQI 600
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 601 GFLNDLRRMNVAITRARMKLIILGD 625
>gi|327402000|ref|YP_004342839.1| DNA helicase [Archaeoglobus veneficus SNP6]
gi|327317508|gb|AEA48124.1| DNA helicase [Archaeoglobus veneficus SNP6]
Length = 664
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+ IGVI Y +QV L+KR + ++IE+ TVD YQGR+K +I+ S +++ E
Sbjct: 541 GVKAGQIGVITPYDDQVDLIKRYIKGIEEIEVKTVDGYQGREKDVIIISFVRSNERGEVG 600
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +RL V+++RA+ KLI +GD + +
Sbjct: 601 FLDDLRRLNVSLTRARRKLIAIGDTETL 628
>gi|421612070|ref|ZP_16053189.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
gi|408497130|gb|EKK01670.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
Length = 734
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+ D I VIA Y QV L+ LD D IEI+TVD +QGR+K ++L + T ++ E
Sbjct: 620 GVTGDQIAVIAPYAAQVRNLRMRLDLDGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 679
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+D++R VA++RAK KLI++GD
Sbjct: 680 LSDQRRSNVALTRAKRKLIVVGD 702
>gi|354546507|emb|CCE43239.1| hypothetical protein CPAR2_208840 [Candida parapsilosis]
Length = 672
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
SG+ IGVIA Y QV LLK+ L + IE++TVD +QGR+K +I+ + ++ ++
Sbjct: 544 SGVLPQDIGVIAPYAAQVQLLKKQLGPESLIEVSTVDGFQGREKEVIILTLVRSNDERDV 603
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L++ +RL VAI+R K +L ++GDLQ++
Sbjct: 604 GFLSEERRLNVAITRPKRQLCVIGDLQLM 632
>gi|50302599|ref|XP_451235.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640366|emb|CAH02823.1| KLLA0A05324p [Kluyveromyces lactis]
Length = 1445
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
L GI D IGV++ Y+ Q+SLLK L D DI++ T DQ+QGRDK I+ S ++ +
Sbjct: 1333 LAHGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRSNPDQA 1392
Query: 62 SKI-LNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
S + L D +R+ VA+SRAK KLII+ + I I
Sbjct: 1393 SGVLLRDLRRINVAVSRAKKKLIIICSWKCISKI 1426
>gi|294881038|ref|XP_002769213.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239872491|gb|EER01931.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 2247
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 10 DHIGVIATYRNQVSLLKR------LLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
D +GVI+ Y+ QV+LLKR L D+ +E+ TVD +QGR+K +I+ S+ +S S
Sbjct: 1951 DGLGVISPYKQQVALLKRNLSYGSLSDEWLEVGTVDSFQGREKDVIVVSTVRSSASSGIG 2010
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQ 89
+ D +RL V+I+RAK L I+GD Q
Sbjct: 2011 FVADMRRLNVSITRAKRALWIVGDSQ 2036
>gi|354543212|emb|CCE39930.1| hypothetical protein CPAR2_603480 [Candida parapsilosis]
Length = 1453
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ +G+ IGV++ YR+Q+ LLKR L D+EI T DQYQGRDK I+ S ++K
Sbjct: 1296 VTAGVDESQIGVMSFYRSQLELLKRNLSSRTDLEILTADQYQGRDKQCIIISLVRSNKEN 1355
Query: 61 ES-KILNDRKRLTVAISRAKHKLIILG 86
+ +L + +RL VA++RAK KL+ILG
Sbjct: 1356 NAGDLLKEWRRLNVAVTRAKSKLVILG 1382
>gi|448534407|ref|XP_003870797.1| Dna2 protein [Candida orthopsilosis Co 90-125]
gi|380355152|emb|CCG24669.1| Dna2 protein [Candida orthopsilosis]
Length = 1438
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+ IGV++ YR+Q+ LLKR L D+EI T DQYQGRDK I+ S ++ K +
Sbjct: 1283 AGVDESQIGVMSFYRSQLELLKRNLSSRTDLEILTADQYQGRDKQCIIISLVRSNNEKNA 1342
Query: 63 -KILNDRKRLTVAISRAKHKLIILG 86
+L + +RL VA++RAK KL+ILG
Sbjct: 1343 GDLLKEWRRLNVAVTRAKSKLVILG 1367
>gi|50309513|ref|XP_454766.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643901|emb|CAG99853.1| KLLA0E18085p [Kluyveromyces lactis]
Length = 681
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ + IGVI+ Y +QVSLLK+L+ + IEI+TVD +QGR+K I+ S ++++ E
Sbjct: 558 AGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFE 617
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++R K +L ++G+++++
Sbjct: 618 VGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
>gi|325185515|emb|CCA19997.1| DNA2like helicase putative [Albugo laibachii Nc14]
gi|325188759|emb|CCA23290.1| DNA2like helicase putative [Albugo laibachii Nc14]
Length = 1254
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSST-CTSKSK 60
G+ + I +++ +R QVS L++L+ +E+ T+D+YQGRD+ ++ S C + +
Sbjct: 1079 GVQCEEIAIVSPFRAQVSRLEKLVWGRGFTQVEVCTIDRYQGRDRGVVFISFVRCNASGR 1138
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L+DR+RL VA++RAK +L+++G +Q +
Sbjct: 1139 VGELLSDRRRLNVALTRAKQRLVLVGSMQTL 1169
>gi|328783814|ref|XP_001121355.2| PREDICTED: DNA2-like helicase-like [Apis mellifera]
Length = 1221
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES- 62
I + IG+IA YR V+LLK+++ KDIEINTVDQYQGRDK II+YS S ++ E
Sbjct: 1094 IELNEIGIIAPYRAHVNLLKKIIIKDIEINTVDQYQGRDKQIIIYSCAKSLLNNRDIEED 1153
Query: 63 -KILNDRKRLTVAISRAKHKLIILGD 87
++L D +RLTVAI+RAK KLI++ D
Sbjct: 1154 IEVLGDYRRLTVAITRAKCKLIVIAD 1179
>gi|365764642|gb|EHN06164.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 683
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VAI+R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAITRPRRQLVVVGNIEVL 653
>gi|190409806|gb|EDV13071.1| DNA helicase A [Saccharomyces cerevisiae RM11-1a]
gi|207343464|gb|EDZ70918.1| YKL017Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147817|emb|CAY81067.1| Hcs1p [Saccharomyces cerevisiae EC1118]
gi|323332808|gb|EGA74213.1| Hcs1p [Saccharomyces cerevisiae AWRI796]
Length = 683
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VAI+R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAITRPRRQLVVVGNIEVL 653
>gi|134055283|emb|CAK96173.1| unnamed protein product [Aspergillus niger]
Length = 1085
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GIP IGVIA YR+Q+SLLK+ L + ++E++T D++QGRDK +I+ S ++ K
Sbjct: 884 GIPARSIGVIALYRSQLSLLKQNLSRYLPELEMHTADKFQGRDKEVIILSCVRSNTDKNV 943
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 944 GDLLRDWRRVNVAFTRARTKLLVVG 968
>gi|367007328|ref|XP_003688394.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
gi|357526702|emb|CCE65960.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
Length = 677
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L S +P IGVI+ YR Q+S +K+L+ + IEI+TVD +QGR+K +I+ S ++
Sbjct: 556 LESNVPQSAIGVISPYRAQISFIKKLIRAEYPGIEISTVDGFQGREKEVIILSLVRSNDD 615
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ L D +RL VAI+R+K +L ++G+++ +
Sbjct: 616 YKVGFLKDSRRLNVAITRSKKQLCVIGNMETL 647
>gi|448666614|ref|ZP_21685259.1| DNA helicase [Haloarcula amylolytica JCM 13557]
gi|445771745|gb|EMA22801.1| DNA helicase [Haloarcula amylolytica JCM 13557]
Length = 930
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P D IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 831 AGVPADDIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPI 888
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 889 FEDYRRINVALTRAKKALVLVGD 911
>gi|241956218|ref|XP_002420829.1| DNA replication ATP-dependent helicase, putative [Candida
dubliniensis CD36]
gi|223644172|emb|CAX40981.1| DNA replication ATP-dependent helicase, putative [Candida
dubliniensis CD36]
Length = 1420
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
++ G+ D IGV++ YR Q+S+LK+ L KD+EI T DQYQGRDK I+ S +++ K
Sbjct: 1263 VLGGVKEDQIGVMSFYRAQLSVLKKNLCNLKDLEILTADQYQGRDKECIIISLVRSNERK 1322
Query: 61 ES-KILNDRKRLTVAISRAKHKLIILG 86
+ ++ + +RL VA +RAK KLIILG
Sbjct: 1323 FAGNLMTEYRRLNVAATRAKSKLIILG 1349
>gi|336397671|ref|ZP_08578471.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
gi|336067407|gb|EGN56041.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
Length = 642
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ IIL S +++ E
Sbjct: 531 VGVISPYRAQVQYLRSLVRKREFFKPYRRLITVNTVDGFQGQERDIILISMVRANENGEI 590
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +R+ VAI+RA+ KLIILGD+Q +
Sbjct: 591 GFLHDLRRMNVAITRARMKLIILGDVQTL 619
>gi|254580966|ref|XP_002496468.1| ZYRO0D00770p [Zygosaccharomyces rouxii]
gi|238939360|emb|CAR27535.1| ZYRO0D00770p [Zygosaccharomyces rouxii]
Length = 655
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S +P D IGVI+ Y QV ++K+L+ + +EI+TVD +QGR+K +I+ S ++ + E
Sbjct: 536 SNVPQDAIGVISPYSAQVGIIKKLIHEKYPQVEISTVDGFQGREKEVIILSLVRSNDTFE 595
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VAI+R K +L I+G+++ +
Sbjct: 596 VGFLKDDRRLNVAITRPKKQLCIVGNMETL 625
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ T+ IGVI Y++ LK+++ D+E+ TVD +QGR+K +I+ S ++ +E L
Sbjct: 541 GVLTEDIGVITPYKDHEDYLKKII-PDVEVKTVDGFQGREKEVIVISLVRSNPEEEIGFL 599
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+D +RL VA++RAK K+II+GD + +
Sbjct: 600 DDLRRLNVALTRAKRKVIIIGDSKTL 625
>gi|301613021|ref|XP_002936016.1| PREDICTED: DNA2-like helicase [Xenopus (Silurana) tropicalis]
Length = 927
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTS-KSKES 62
P+D IG+IA YR Q+ ++ + +E+NTVD+YQGRDKS+I+ S ++ K
Sbjct: 808 PSD-IGIIAPYRQQLKVISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 866
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA++RAKHKLI+LG
Sbjct: 867 DLLKDWRRLNVALTRAKHKLIMLG 890
>gi|295669542|ref|XP_002795319.1| DNA replication ATP-dependent helicase dna2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285253|gb|EEH40819.1| DNA replication ATP-dependent helicase dna2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1492
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD---KDIEINTVDQYQGRDKSIILYSSTCTS 57
S IS GIP IGVI YR+Q++LLK+ L D+E++T D++QGRDK II+ S C
Sbjct: 1264 SFISVGIPARDIGVITLYRSQLALLKQNLRHYLPDLEMHTADRFQGRDKEIIIMS--CVR 1321
Query: 58 KSKE---SKILNDRKRLTVAISRAKHKLIILG 86
+ E ++ D +R+ VA +RAK KL+I+G
Sbjct: 1322 SNSERNVGELFRDWRRVNVAFTRAKTKLLIIG 1353
>gi|378729525|gb|EHY55984.1| DNA replication ATP-dependent helicase Dna2 [Exophiala dermatitidis
NIH/UT8656]
Length = 1190
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 10/92 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKR---------LLDKDIEINTVDQYQGRDKSIILYSSTC 55
SG+P IGVI YR+Q++LLK + D+E++T D+YQGRDK +++ S
Sbjct: 926 SGVPPRSIGVITFYRSQLALLKSDVKSLVRSAAVAADVEMHTADKYQGRDKEVVILSCVR 985
Query: 56 TSKSKE-SKILNDRKRLTVAISRAKHKLIILG 86
++ +K +L D +R+ VA++RA+ KL+ILG
Sbjct: 986 SNANKHVGDLLKDWRRVNVAVTRARSKLLILG 1017
>gi|448688270|ref|ZP_21694103.1| DNA helicase [Haloarcula japonica DSM 6131]
gi|445779331|gb|EMA30261.1| DNA helicase [Haloarcula japonica DSM 6131]
Length = 895
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P D IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 796 AGVPADDIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPI 853
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 854 FEDYRRINVALTRAKKALVLVGD 876
>gi|47218708|emb|CAG05680.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1043
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYS--STCTSKSKE 61
P D IGVIA YR Q+ + LL +E+NTVD+YQGRDKS+IL S + +
Sbjct: 934 PGD-IGVIAPYRQQLRTISGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPL 992
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
++L D +RL VAI+RAK KL++LG
Sbjct: 993 GELLKDWRRLNVAITRAKSKLLMLG 1017
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +Q L+ + +D+E+ TVD YQGR+K +I+ S ++K E L
Sbjct: 519 GVKPEWIGVITPYDDQRDLISMKVPEDVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFL 578
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI++GD
Sbjct: 579 KDLRRLNVSLTRAKRKLIVVGD 600
>gi|366996476|ref|XP_003678001.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
gi|342303871|emb|CCC71654.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
Length = 681
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S +P IG+I+ Y QVSL+K+L+ +D IEI+TVD +QGR+K +I+ S ++ E
Sbjct: 563 SNVPQTAIGIISPYSAQVSLIKKLIREDYPLIEISTVDGFQGREKEVIILSLVRSNDKFE 622
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++R K +L ++G+++ +
Sbjct: 623 VGFLKDERRLNVAMTRPKKQLCVVGNIECL 652
>gi|332159100|ref|YP_004424379.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
gi|331034563|gb|AEC52375.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
Length = 655
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IG+I Y +Q L+ + +D+E+ TVD YQGR+K +I+ S ++K+ E L
Sbjct: 543 GVKKEWIGIITPYDDQRDLISLNVPEDVEVKTVDGYQGREKEVIILSFVRSNKAGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RA+ KLII+GD
Sbjct: 603 KDLRRLNVSLTRARRKLIIVGD 624
>gi|408407615|sp|F6QXW0.1|DNA2_XENTR RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1048
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTS-KSKES 62
P+D IG+IA YR Q+ ++ + +E+NTVD+YQGRDKS+I+ S ++ K
Sbjct: 929 PSD-IGIIAPYRQQLKVISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 987
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA++RAKHKLI+LG
Sbjct: 988 DLLKDWRRLNVALTRAKHKLIMLG 1011
>gi|419759476|ref|ZP_14285775.1| DNA helicase [Thermosipho africanus H17ap60334]
gi|407515486|gb|EKF50231.1| DNA helicase [Thermosipho africanus H17ap60334]
Length = 639
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ ++IGVI Y +QV L+K + +E+NTVD +QGR+K +I+ S +++ KE L
Sbjct: 534 GLNREYIGVITPYDDQVDLIKSF-NLGVEVNTVDGFQGREKEVIIISFVRSNQRKELGFL 592
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+I+RAK KLI +GD
Sbjct: 593 TDLRRLNVSITRAKRKLICIGD 614
>gi|217076667|ref|YP_002334383.1| DNA helicase [Thermosipho africanus TCF52B]
gi|217036520|gb|ACJ75042.1| DNA helicase, putative [Thermosipho africanus TCF52B]
Length = 639
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ ++IGVI Y +QV L+K + +E+NTVD +QGR+K +I+ S +++ KE L
Sbjct: 534 GLNREYIGVITPYDDQVDLIKSF-NLGVEVNTVDGFQGREKEVIIISFVRSNQRKELGFL 592
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+I+RAK KLI +GD
Sbjct: 593 TDLRRLNVSITRAKRKLICIGD 614
>gi|317026211|ref|XP_001389173.2| DNA replication helicase Dna2 [Aspergillus niger CBS 513.88]
Length = 1660
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GIP IGVIA YR+Q+SLLK+ L + ++E++T D++QGRDK +I+ S ++ K
Sbjct: 1459 GIPARSIGVIALYRSQLSLLKQNLSRYLPELEMHTADKFQGRDKEVIILSCVRSNTDKNV 1518
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1519 GDLLRDWRRVNVAFTRARTKLLVVG 1543
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +Q L+ + +D+E+ TVD YQGR+K +I+ S ++K E L
Sbjct: 543 GVKPEWIGVITPYDDQRDLISMKVPEDVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLI++GD
Sbjct: 603 KDLRRLNVSLTRAKRKLIVVGD 624
>gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
gi|18892566|gb|AAL80696.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
Length = 655
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 57/85 (67%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 540 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI++GD
Sbjct: 600 GFLKDLRRLNVSLTRAKRKLIMIGD 624
>gi|261194643|ref|XP_002623726.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis SLH14081]
gi|239588264|gb|EEQ70907.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis SLH14081]
Length = 1575
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSST-CTS 57
S IS GIP IGV+ YR+Q+SLLK+ L D+E++T D++QGRDK II+ S S
Sbjct: 1350 SFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADRFQGRDKEIIIMSCVRSNS 1409
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILG 86
+ ++L D +R+ VA +RA+ KL+I+G
Sbjct: 1410 ERNVGELLRDWRRVNVAFTRARTKLLIVG 1438
>gi|239613455|gb|EEQ90442.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis ER-3]
Length = 1575
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSST-CTS 57
S IS GIP IGV+ YR+Q+SLLK+ L D+E++T D++QGRDK II+ S S
Sbjct: 1350 SFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADRFQGRDKEIIIMSCVRSNS 1409
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILG 86
+ ++L D +R+ VA +RA+ KL+I+G
Sbjct: 1410 ERNVGELLRDWRRVNVAFTRARTKLLIVG 1438
>gi|254565491|ref|XP_002489856.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|238029652|emb|CAY67575.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|328350271|emb|CCA36671.1| hypothetical protein PP7435_Chr1-0519 [Komagataella pastoris CBS
7435]
Length = 726
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----DK--DIEINTVDQYQGRDKSIILYSSTCT 56
L +G+ IG+I+ Y QVS LK LL D+ ++EI+TVD +QGR+K II+ + +
Sbjct: 599 LKAGVLQTDIGIISPYNAQVSFLKELLINGDDQLTELEISTVDGFQGREKEIIILTLVRS 658
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ KE L D +RL V+++RAK +L ++GD++ +
Sbjct: 659 NREKEVGFLKDFRRLNVSMTRAKKQLCVIGDMETL 693
>gi|397651076|ref|YP_006491657.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
gi|393188667|gb|AFN03365.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
Length = 655
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 57/85 (67%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 540 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI++GD
Sbjct: 600 GFLKDLRRLNVSLTRAKRKLIMIGD 624
>gi|349578716|dbj|GAA23881.1| K7_Dna2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1522
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1457
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +Q L+ + +D+E+ TVD YQGR+K +I+ S +++ E L
Sbjct: 543 GVKPEWIGVITPYDDQRDLISLNVPEDVEVKTVDGYQGREKEVIILSLVRSNERGEIGFL 602
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RAK KLII+GD
Sbjct: 603 RDLRRLNVSLTRAKRKLIIVGD 624
>gi|6322835|ref|NP_012908.1| Hcs1p [Saccharomyces cerevisiae S288c]
gi|465704|sp|P34243.1|HCS1_YEAST RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|395256|emb|CAA52266.1| unnamed protein product [Saccharomyces cerevisiae]
gi|486007|emb|CAA81852.1| DIP1 [Saccharomyces cerevisiae]
gi|151941528|gb|EDN59891.1| DNA helicase A [Saccharomyces cerevisiae YJM789]
gi|285813242|tpg|DAA09139.1| TPA: Hcs1p [Saccharomyces cerevisiae S288c]
gi|392298121|gb|EIW09219.1| Hcs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 683
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA++R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
>gi|242074142|ref|XP_002447007.1| hypothetical protein SORBIDRAFT_06g026800 [Sorghum bicolor]
gi|241938190|gb|EES11335.1| hypothetical protein SORBIDRAFT_06g026800 [Sorghum bicolor]
Length = 1147
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES 62
G+ D IG+I Y QV+++++ D +E++T+D+YQGRDK I+ S ST S++ S
Sbjct: 1026 GVAQDAIGIITPYNAQVNIIQQCTDGLVEVHTIDKYQGRDKECIIVSFVRSTANSRASGS 1085
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D R+ V ++RAK KLI++G
Sbjct: 1086 SLLGDWHRINVLLTRAKKKLIMVG 1109
>gi|6321958|ref|NP_012034.1| Dna2p [Saccharomyces cerevisiae S288c]
gi|731738|sp|P38859.1|DNA2_YEAST RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
Includes: RecName: Full=DNA replication nuclease DNA2;
Includes: RecName: Full=DNA replication ATP-dependent
helicase DNA2
gi|458906|gb|AAB68010.1| Dna2p: DNA replication helicase [Saccharomyces cerevisiae]
gi|256273969|gb|EEU08887.1| Dna2p [Saccharomyces cerevisiae JAY291]
gi|285810070|tpg|DAA06857.1| TPA: Dna2p [Saccharomyces cerevisiae S288c]
gi|392298975|gb|EIW10070.1| Dna2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1522
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1457
>gi|190405942|gb|EDV09209.1| DNA replication helicase [Saccharomyces cerevisiae RM11-1a]
Length = 1522
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1457
>gi|259146921|emb|CAY80177.1| Dna2p [Saccharomyces cerevisiae EC1118]
Length = 1522
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1457
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV LK+L+ K I +NTVD +QG+++ IIL S + +
Sbjct: 507 VGIISPYRAQVQYLKKLIRKREFFKPYRKFISVNTVDGFQGQERDIILISMVRANDDGQI 566
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +R+ VAI+RA+ KLIILG+ Q +
Sbjct: 567 GFLNDLRRMNVAITRARMKLIILGNAQTM 595
>gi|401624864|gb|EJS42903.1| hcs1p [Saccharomyces arboricola H-6]
Length = 684
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 64/100 (64%), Gaps = 8/100 (8%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
S +P + IG+I+ Y QVS +KRL+ DIEI+TVD +QGR+K +++ S +++
Sbjct: 563 SNVPQESIGIISPYSAQVSHMKRLIHDELKLTDIEISTVDGFQGREKDVVILSLVRSNEK 622
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPN 99
E L + +RL VA++R + +L+++G+++ A+ C N
Sbjct: 623 FEVGFLKEERRLNVAMTRPRRQLVVVGNIE---ALQRCGN 659
>gi|151944110|gb|EDN62403.1| DNA helicase [Saccharomyces cerevisiae YJM789]
Length = 1522
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1457
>gi|349579545|dbj|GAA24707.1| K7_Hcs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 683
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA++R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
>gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus horikoshii OT3]
gi|3257320|dbj|BAA30003.1| 656aa long hypothetical DNA-binding protein [Pyrococcus horikoshii
OT3]
Length = 656
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 56/85 (65%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 540 LESGVKAEMIGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKVGEI 599
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI++GD
Sbjct: 600 GFLKDLRRLNVSLTRAKRKLIMIGD 624
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
GI + I VI+ Y +QV +KR+L + +EI TVD +QGR+K +++ S ++KS+
Sbjct: 549 GIRPEDIAVISPYDDQVVHIKRMLHVEGLEIKTVDGFQGREKEVVIVSFVRSNKSRTIGF 608
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+I+RAK KL+++GD
Sbjct: 609 LKDLRRLNVSITRAKRKLVLIGD 631
>gi|410077865|ref|XP_003956514.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
gi|372463098|emb|CCF57379.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
Length = 675
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL-DK--DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S IP IG+I+ Y QV+LLK+ + DK IEI+TVD +QGR+K +I++S +++ E
Sbjct: 556 SNIPEHAIGIISPYSAQVALLKKTISDKYPTIEISTVDGFQGREKEVIIFSLVRSNEKFE 615
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++R K +L ++G+++ +
Sbjct: 616 VGFLKDERRLNVAMTRPKKQLCVIGNIETL 645
>gi|425766173|gb|EKV04798.1| DNA replication helicase Dna2, putative [Penicillium digitatum Pd1]
gi|425774527|gb|EKV12830.1| DNA replication helicase Dna2, putative [Penicillium digitatum PHI26]
Length = 1637
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 8/87 (9%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
GIP +IGVI YR+Q+SLL++ L + D+E++T D++QGRDK +I+ S C + E+
Sbjct: 1430 GIPARNIGVITFYRSQLSLLRQSLRRYTPDLEMHTTDKFQGRDKEVIILS--CVRSNAEN 1487
Query: 63 KI---LNDRKRLTVAISRAKHKLIILG 86
+ L D +R+ VA +RA+ KL+++G
Sbjct: 1488 NVGELLRDWRRVNVAFTRAQTKLLVVG 1514
>gi|149247810|ref|XP_001528299.1| hypothetical protein LELG_00819 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448253|gb|EDK42641.1| hypothetical protein LELG_00819 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 741
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L SG+ IGVIA Y QV LLK+ D IEI+TVD +QGR+K +I+ + ++
Sbjct: 606 LKSGVQPTDIGVIAPYAAQVLLLKKQFGPDSQIEISTVDGFQGREKEVIILTLVRSNDDN 665
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDL 88
E L++ +RL VAI+R K +L ++GDL
Sbjct: 666 EVGFLSEERRLNVAITRPKRQLCVIGDL 693
>gi|149235917|ref|XP_001523836.1| hypothetical protein LELG_04649 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452212|gb|EDK46468.1| hypothetical protein LELG_04649 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1562
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSST-CTSKS 59
+++G+ IGV++ YR Q++LLK+ L D+EI T DQYQGRDK I+ S ++
Sbjct: 1405 VLAGVEEKQIGVMSFYRAQLNLLKKDLSSRLDLEILTADQYQGRDKECIIISLVRLNDEN 1464
Query: 60 KESKILNDRKRLTVAISRAKHKLIILG 86
++L + +RL VA++RAK KLIILG
Sbjct: 1465 NAGELLKEWRRLNVAVTRAKSKLIILG 1491
>gi|414585704|tpg|DAA36275.1| TPA: hypothetical protein ZEAMMB73_302708 [Zea mays]
Length = 1257
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES 62
G+ D IG+I Y QV+++++ D +E++T+D+YQGRDK I+ S ST S++ S
Sbjct: 1136 GVAQDAIGIITPYNAQVNIIQQYTDCLVEVHTIDKYQGRDKECIIVSFVRSTANSRASGS 1195
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L D R+ V ++RAK KLI++G
Sbjct: 1196 SLLGDWHRINVLLTRAKKKLIMVG 1219
>gi|11498984|ref|NP_070217.1| DNA helicase [Archaeoglobus fulgidus DSM 4304]
gi|2649188|gb|AAB89860.1| DNA helicase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 648
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IGVI Y +QV LL+ +D +E+++VD +QGR+K +I+ S +++ +E L
Sbjct: 531 GLKKEQIGVITPYDDQVDLLREKVD--VEVSSVDGFQGREKEVIIISFVRSNRKREIGFL 588
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+D +RL V+++RA+ KLI++GD + +
Sbjct: 589 DDLRRLNVSLTRARRKLIMVGDSETL 614
>gi|294659099|ref|XP_461444.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
gi|202953617|emb|CAG89859.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
Length = 755
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSK 58
L +GI IGVI+ Y Q SLLK+ L IE++TVD +QGR+K I+ S ++
Sbjct: 634 LQAGITPADIGVISPYNAQASLLKKTLQSRQIDGIEVSTVDGFQGREKEAIIISLVRSNP 693
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++E L DR+RL VA++R K L I+GDL+++
Sbjct: 694 NREIGFLADRRRLNVAMTRPKKHLCIIGDLELM 726
>gi|389852292|ref|YP_006354526.1| DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
gi|388249598|gb|AFK22451.1| putative DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
Length = 633
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 56/85 (65%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 511 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEI 570
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V+++RAK KLI++GD
Sbjct: 571 GFLKDLRRLNVSLTRAKRKLIMVGD 595
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+G+ + I +I+ Y QV LL+RLLD I+++T+D +QGR+ ++ S ++ + E
Sbjct: 526 AGVAAEAIAIISPYAAQVRLLRRLLDGTLIDVDTIDGFQGRESEAVIISLVRSNATGEIG 585
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLII+GD I
Sbjct: 586 FLADVRRMNVAITRARRKLIIIGDSATI 613
>gi|367040429|ref|XP_003650595.1| hypothetical protein THITE_131345 [Thielavia terrestris NRRL 8126]
gi|346997856|gb|AEO64259.1| hypothetical protein THITE_131345 [Thielavia terrestris NRRL 8126]
Length = 1447
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL-------DKDIEINTVDQYQGRDKSIILYSSTC 55
L +G+P IGV+ YR+Q++LLK L D+E++T D++QGRDK+++L S
Sbjct: 1198 LAAGVPASEIGVVTHYRSQLALLKHTLRALGGGGAGDVEMHTADRFQGRDKAVVLLSLVR 1257
Query: 56 TSKSKE-SKILNDRKRLTVAISRAKHKLIILG 86
+++ +L D +R+ VA +RAK KL+++G
Sbjct: 1258 SNEQCAIGDLLKDWRRINVAFTRAKTKLLVVG 1289
>gi|119500114|ref|XP_001266814.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
181]
gi|119414979|gb|EAW24917.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
181]
Length = 1607
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
SL+S GIP +IGVI YR+Q+SLLK+ L + ++E++T D++QGRDK ++L S C
Sbjct: 1399 SLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADKFQGRDKEVVLLS--CVR 1456
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ ++ + L D +R+ VA +RA+ KL+++G
Sbjct: 1457 SNTDNNVGDLLRDWRRINVAFTRARTKLLVIG 1488
>gi|444317545|ref|XP_004179430.1| hypothetical protein TBLA_0C00960 [Tetrapisispora blattae CBS 6284]
gi|387512471|emb|CCH59911.1| hypothetical protein TBLA_0C00960 [Tetrapisispora blattae CBS 6284]
Length = 694
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S I +HIG+I+ Y QVS LK+LL + IEI TVD +QGR+K +I+ + +++ E
Sbjct: 571 SNISQEHIGIISPYSAQVSYLKKLLREKYPLIEIQTVDGFQGREKEVIILTLVRSNEKFE 630
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +RL VA++R K +L I+G+++++
Sbjct: 631 VGFLKEERRLNVAMTRPKKQLCIVGNMEML 660
>gi|256271560|gb|EEU06603.1| Hcs1p [Saccharomyces cerevisiae JAY291]
Length = 683
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPGNSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA++R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+L S + + I VIA Y++QV + + K++EI+TVD +QGR+K +I++S+ +++
Sbjct: 637 ALKSSLKEEEIAVIAAYKDQVDFINQHNKFKNVEIDTVDAFQGREKEMIIFSAVRSNQDN 696
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RAK K+I +GD I
Sbjct: 697 NIGFLRDLRRLNVALTRAKRKMIFVGDSSTI 727
>gi|357165528|ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Brachypodium
distachyon]
Length = 1281
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES 62
G+ D IG+I Y Q +L+++ +D +E++T+D+YQGRDK I+ S S+ S++ S
Sbjct: 1152 GVSQDEIGIITPYNAQANLIRQHVDSLVEVHTIDKYQGRDKECIIVSFVRSSGDSRASGS 1211
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+L D R+ V ++RAK KLI++G + +I
Sbjct: 1212 SLLGDWHRINVVLTRAKKKLIMVGSAGTLSSI 1243
>gi|344211858|ref|YP_004796178.1| DNA helicase [Haloarcula hispanica ATCC 33960]
gi|343783213|gb|AEM57190.1| DNA helicase [Haloarcula hispanica ATCC 33960]
Length = 895
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P + IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 796 AGVPANDIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPI 853
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 854 FEDYRRINVALTRAKKALVLVGD 876
>gi|440794470|gb|ELR15630.1| DNA replication factor Dna2 [Acanthamoeba castellanii str. Neff]
Length = 1101
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTC 55
L+ G+ +G+I+ YR QV L++ L+ K EI+TVD+YQGRDK I+ S
Sbjct: 986 LLCGLDPADLGIISPYRAQVKLIRSLMAKINDLTGDATEIHTVDKYQGRDKDCIIVSLVR 1045
Query: 56 TSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ K+ ++L D +R+ VA +RAK KLIILG L +
Sbjct: 1046 SNAEKKVGELLCDWRRVNVAFTRAKKKLIILGSLSTL 1082
>gi|323336740|gb|EGA78004.1| Hcs1p [Saccharomyces cerevisiae Vin13]
Length = 683
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+P + IGVI+ Y QVS LK+L+ DIEI+TVD +QGR+K +I+ S +++
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA +R + +L+++G+++V+
Sbjct: 623 EVGFLKEERRLNVAXTRPRRQLVVVGNIEVL 653
>gi|119719866|ref|YP_920361.1| AAA ATPase [Thermofilum pendens Hrk 5]
gi|119524986|gb|ABL78358.1| AAA ATPase [Thermofilum pendens Hrk 5]
Length = 629
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
G+P + IGVI YR Q S +K L ++E+NTVD +QGR+K ++++S T T +
Sbjct: 517 GVPQEEIGVITPYRAQRSRIKEYLQGFNVEVNTVDAFQGREKDVVIFSLTAT-REDSLAF 575
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
D RL VAI+RA+ KL+ + + V+
Sbjct: 576 AADANRLNVAITRARKKLLFVANANVM 602
>gi|343085505|ref|YP_004774800.1| ATPase AAA [Cyclobacterium marinum DSM 745]
gi|342354039|gb|AEL26569.1| AAA ATPase [Cyclobacterium marinum DSM 745]
Length = 641
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 12/93 (12%)
Query: 11 HIGVIATYRNQVSLLKRL------------LDKDIEINTVDQYQGRDKSIILYSSTCTSK 58
+G+IA Y QV LLK + LD+++ I+TVD +QG+++ IIL S T +++
Sbjct: 522 QVGLIAPYSAQVRLLKEMVAMDSEWIFLKQLDQNLTISTVDGFQGQERDIILISLTRSNE 581
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L D +R+ VA++RAK KLI+LGD I
Sbjct: 582 QGEIGFLADTRRMNVALTRAKRKLIVLGDSATI 614
>gi|297603268|ref|NP_001053694.2| Os04g0588200 [Oryza sativa Japonica Group]
gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa Japonica Group]
gi|255675733|dbj|BAF15608.2| Os04g0588200 [Oryza sativa Japonica Group]
Length = 1287
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKS 59
L G+ D +G+I Y Q +L+++ +D +E++T+D+YQGRDK I+ S S +++
Sbjct: 1155 LKRGVAQDGVGIITPYNAQANLIQQHVDASVEVHTIDKYQGRDKECIIVSFVRSNGNTRA 1214
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
S +L D R+ V ++RAK KLI++G + I
Sbjct: 1215 SGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTI 1249
>gi|159125465|gb|EDP50582.1| DNA replication helicase Dna2, putative [Aspergillus fumigatus A1163]
Length = 1657
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
SL+S GIP +IGVI YR+Q+SLLK+ L + ++E++T D++QGRDK ++L S C
Sbjct: 1449 SLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADKFQGRDKEVVLLS--CVR 1506
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ ++ + L D +R+ VA +RA+ KL+++G
Sbjct: 1507 SNVDNNVGDLLRDWRRINVAFTRARTKLLVIG 1538
>gi|146323861|ref|XP_751610.2| DNA replication helicase Dna2 [Aspergillus fumigatus Af293]
gi|129557499|gb|EAL89572.2| DNA replication helicase Dna2, putative [Aspergillus fumigatus Af293]
Length = 1657
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
SL+S GIP +IGVI YR+Q+SLLK+ L + ++E++T D++QGRDK ++L S C
Sbjct: 1449 SLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADKFQGRDKEVVLLS--CVR 1506
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ ++ + L D +R+ VA +RA+ KL+++G
Sbjct: 1507 SNVDNNVGDLLRDWRRINVAFTRARTKLLVIG 1538
>gi|300773891|ref|ZP_07083760.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760062|gb|EFK56889.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
Length = 634
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
P +IG+I+ YR QV LLK L+ D I+I T+D +QG+++ II S T ++
Sbjct: 518 PFPNIGLISPYRQQVLLLKELIRNDEMKISVSIQIQTIDGFQGQERDIIYISLTRSNAEG 577
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ LN+ +R+ VA++RA++KLII+GD I
Sbjct: 578 QIGFLNEIRRMNVAMTRARYKLIIIGDSSTI 608
>gi|67526391|ref|XP_661257.1| hypothetical protein AN3653.2 [Aspergillus nidulans FGSC A4]
gi|40740671|gb|EAA59861.1| hypothetical protein AN3653.2 [Aspergillus nidulans FGSC A4]
gi|259481813|tpe|CBF75685.1| TPA: essential tripartite DNA replication factor with
single-stranded DNA-dependent ATPase (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1048
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 8/87 (9%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
GIP IGVI YR+Q+SLLK+ L +E++T D++QGRDK +I+ S C ++E+
Sbjct: 846 GIPARSIGVITFYRSQLSLLKQNLRHHLPALEMHTADKFQGRDKEVIILS--CVRSNQEN 903
Query: 63 KI---LNDRKRLTVAISRAKHKLIILG 86
+ L+D +R+ VA +RA+ KL++LG
Sbjct: 904 YVGDLLSDWRRVNVAFTRARTKLLVLG 930
>gi|448725345|ref|ZP_21707806.1| DNA replication factor Dna2 [Halococcus morrhuae DSM 1307]
gi|445798681|gb|EMA49077.1| DNA replication factor Dna2 [Halococcus morrhuae DSM 1307]
Length = 922
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
++ +GIP + IGVIA +R Q + ++R L D+ ++TVD++QG K +I+ S T +
Sbjct: 821 AVAAGIPREEIGVIAPFRAQAAAIRREL-ADVAVDTVDRFQGSAKEVIIVSFVATG-DLD 878
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
S I D +R+ VA++RAK L+++GD
Sbjct: 879 SPIFEDHRRVNVALTRAKKALVLVGD 904
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 19/109 (17%)
Query: 1 MSLISGI-------PTDHIGVIATYRNQVSLLKRLLDK-----------DIEINTVDQYQ 42
+S+++G+ P D IGVI Y QV LL L ++ +EI +VD YQ
Sbjct: 529 LSIVNGLLSAGDLTPAD-IGVITPYSGQVRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQ 587
Query: 43 GRDKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
GR+K II++S+ ++ E L DR+RL VAI+RA+ LI+LG+ + +
Sbjct: 588 GREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIVLGNTKTL 636
>gi|170030080|ref|XP_001842918.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865924|gb|EDS29307.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 715
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I Y +QV LK LL+ KDIE+ + +QYQGR+K I+L S T + SK L D
Sbjct: 576 IGIITPYASQVRYLKDLLNMRGWKDIEVGSTEQYQGREKPIMLMS-TVRTGSKSVGFLAD 634
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
KRL V+++RA+ +I++GDL+ +
Sbjct: 635 PKRLNVSLTRAQALMIVVGDLETL 658
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I Y +QV LK LL KDIE+ + +QYQGR+K I+L ST + SK L +
Sbjct: 195 IGIITPYASQVRYLKDLLRMRGWKDIEVGSTEQYQGREKRIMLM-STVRTGSKSVGFLAN 253
Query: 68 RKRLTVAISRAKHKLII 84
KRL V+++RA+ +I+
Sbjct: 254 TKRLNVSLTRAQALMIV 270
>gi|125549510|gb|EAY95332.1| hypothetical protein OsI_17160 [Oryza sativa Indica Group]
Length = 1269
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES 62
G+ D +G+I Y Q +L+++ +D +E++T+D+YQGRDK I+ S S S++ S
Sbjct: 1140 GVAQDGVGIITPYNAQANLIQQHVDASVEVHTIDKYQGRDKECIIVSFVRSNGNSRASGS 1199
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+L D R+ V ++RAK KLI++G + I
Sbjct: 1200 SLLGDWHRINVVLTRAKKKLIMVGSAATLSTI 1231
>gi|448633882|ref|ZP_21674381.1| DNA helicase [Haloarcula vallismortis ATCC 29715]
gi|445750573|gb|EMA02011.1| DNA helicase [Haloarcula vallismortis ATCC 29715]
Length = 913
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P + IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 814 AGVPAEDIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-NLDSPI 871
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 872 FEDYRRINVALTRAKKALVLVGD 894
>gi|170030084|ref|XP_001842920.1| potentail helicase MOV-10 [Culex quinquefasciatus]
gi|167865926|gb|EDS29309.1| potentail helicase MOV-10 [Culex quinquefasciatus]
Length = 736
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I Y +QV LK LL+ KDIE+ + +QYQGR+K I+L S T + SK L D
Sbjct: 505 IGIITPYASQVRYLKDLLNMRGWKDIEVGSTEQYQGREKPIMLMS-TVRTGSKSVGFLAD 563
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
KRL V+++RA+ +I++GDL+ +
Sbjct: 564 PKRLNVSLTRAQALMIVVGDLETL 587
>gi|15679629|ref|NP_276746.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622761|gb|AAB86107.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 642
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IG+I Y +QV L+ ++D +E+N+VD +QGR+K +I+ S ++++ L
Sbjct: 526 GVKPEEIGIITPYDDQVDLISSMID--VEVNSVDGFQGREKDVIIISMVRSNRNGSIGFL 583
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVIIA 93
D +RL V+++RA+ KLII+GD + + A
Sbjct: 584 KDLRRLNVSLTRARRKLIIIGDSRTLSA 611
>gi|121708259|ref|XP_001272076.1| DNA replication helicase Dna2, putative [Aspergillus clavatus NRRL 1]
gi|119400224|gb|EAW10650.1| DNA replication helicase Dna2, putative [Aspergillus clavatus NRRL 1]
Length = 1679
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GIP IGVI YR+Q+SLLK+ L + ++E++T D++QGRDK I++ S C
Sbjct: 1454 ALISCGIPARKIGVITFYRSQLSLLKQTLRRYLPELEMHTADKFQGRDKEIVILS--CVR 1511
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ ++ + L D +R+ VA +RA+ KL+++G
Sbjct: 1512 SNADNNVGDLLRDWRRINVAFTRARTKLLVIG 1543
>gi|198274180|ref|ZP_03206712.1| hypothetical protein BACPLE_00320 [Bacteroides plebeius DSM 17135]
gi|198272855|gb|EDY97124.1| putative DNA helicase [Bacteroides plebeius DSM 17135]
Length = 630
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ KD I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLVRKDAFFKPYRSLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|336384931|gb|EGO26078.1| hypothetical protein SERLADRAFT_462742 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSK 58
L+SG+P +GVI+ YR Q+ LL +L+ K +E+ TVD+ QGRDK ++ S +++
Sbjct: 102 LLSGVPVGEVGVISLYRQQLKLLVSMLEGRGGKGVEVITVDRSQGRDKDCVIVSMVRSNE 161
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILG 86
+ + +++ D +RL VA +RA+ KL+++G
Sbjct: 162 NGQIGELIKDWRRLNVAFTRARKKLVVIG 190
>gi|399576817|ref|ZP_10770572.1| DNA/RNA helicase, superfamily i [Halogranum salarium B-1]
gi|399238261|gb|EJN59190.1| DNA/RNA helicase, superfamily i [Halogranum salarium B-1]
Length = 886
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P D IGVIA +R QV+ + R + D+ ++TVD++QG K +I+ S T S + I
Sbjct: 788 AGVPADDIGVIAPFRAQVAEIGRRV--DVTVDTVDRFQGSAKEVIVVSFVATG-SLDEPI 844
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +RL VA++RAK L+++GD
Sbjct: 845 FEDYRRLNVALTRAKKALVLVGD 867
>gi|189461769|ref|ZP_03010554.1| hypothetical protein BACCOP_02435 [Bacteroides coprocola DSM 17136]
gi|189431529|gb|EDV00514.1| putative DNA helicase [Bacteroides coprocola DSM 17136]
Length = 629
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L+RL+ D I INTVD +QG+++ +IL S ++ +
Sbjct: 523 VGMISPYKAQVQYLRRLVRNDAFFKPYRQAITINTVDGFQGQERDVILISLVRANEEGQI 582
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 583 GFLNDLRRMNVAITRARMKLIILGD 607
>gi|365759666|gb|EHN01443.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 682
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-DK----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ D IGVI+ Y QVS LKRL+ DK +IEI+TVD +QGR+K +I+ S +++
Sbjct: 562 NVQQDSIGVISPYNAQVSHLKRLIHDKLELNNIEISTVDGFQGREKDVIILSLVRSNEEF 621
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA++R + +L+++G+++V+
Sbjct: 622 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 652
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 14/101 (13%)
Query: 3 LISGIPTDHIGVIATYRNQ-VSLLKRLLD---------KDIEINTVDQYQGRDKSIILYS 52
L SG+ D IG+I Y Q ++K +L ++IE+ +VD +QGR+K IIL S
Sbjct: 484 LRSGVRADQIGIITPYEAQRAHIVKHMLHSGPLNNKLYQEIEVASVDAFQGREKDIILLS 543
Query: 53 STCTSKSKESKI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
C +K++KI LND +RL VA++RA++ LII+G+ +V+
Sbjct: 544 --CVRSNKDNKIGFLNDSRRLNVALTRARYGLIIVGNPKVL 582
>gi|448639724|ref|ZP_21676872.1| DNA helicase [Haloarcula sinaiiensis ATCC 33800]
gi|445762251|gb|EMA13472.1| DNA helicase [Haloarcula sinaiiensis ATCC 33800]
Length = 895
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P+ IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 796 AGVPSADIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPI 853
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 854 FEDYRRINVALTRAKKALVLVGD 876
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|448303283|ref|ZP_21493232.1| DNA replication factor Dna2 [Natronorubrum sulfidifaciens JCM
14089]
gi|445593068|gb|ELY47246.1| DNA replication factor Dna2 [Natronorubrum sulfidifaciens JCM
14089]
Length = 939
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L R + D+ ++TVD++QG + +I+ S T T + E I
Sbjct: 839 AGLERSEIGVIAPFRAQVSELSRHVPDDVTVDTVDRFQGSSQEVIIISFTATG-TLEGPI 897
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 898 FEDYRRINVALTRPKRALVLVGD 920
>gi|365984191|ref|XP_003668928.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
gi|343767696|emb|CCD23685.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
Length = 699
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S +P + IG+I+ Y QV+LLK L+ D IEI+TVD +QGR+K +I+ S ++ E
Sbjct: 580 SNVPQECIGIISPYSAQVNLLKSLIRTDYPLIEISTVDGFQGREKEVIILSLVRSNDKFE 639
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +RL VA++R K +L ++G+++ +
Sbjct: 640 VGFLSDDRRLNVAMTRPKRQLCVVGNIECL 669
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|449664309|ref|XP_002170802.2| PREDICTED: DNA replication ATP-dependent helicase/nuclease
DNA2-like [Hydra magnipapillata]
Length = 774
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKR---LLDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
L G+ +++IGVI+ YR Q+ ++++ +L +++E++T+D+YQG+DK I+ S +++S
Sbjct: 556 LHCGLKSENIGVISPYRQQLKVIRKELSVLAENVEVDTIDKYQGKDKPCIIVSLVRSNES 615
Query: 60 KE-SKILNDRKRLTVAISRAKHKLIILG 86
E +L D +R+ VAI+RAK KLI++G
Sbjct: 616 NEVGDLLTDWRRVNVAITRAKTKLILIG 643
>gi|156848392|ref|XP_001647078.1| hypothetical protein Kpol_1050p80 [Vanderwaltozyma polyspora DSM
70294]
gi|156117761|gb|EDO19220.1| hypothetical protein Kpol_1050p80 [Vanderwaltozyma polyspora DSM
70294]
Length = 1505
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 9/98 (9%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
SGI T +IGV++ YR Q+ LLKR +K+ +EI T DQ+QGRDK I+ S ++
Sbjct: 1338 SGISTKNIGVMSLYRGQIRLLKRKFEKERYSKLEILTADQFQGRDKDCIIIS--LVRRNN 1395
Query: 61 E---SKILNDRKRLTVAISRAKHKLIILGDLQVIIAIV 95
E +L + +R+ VA+SRAK KLII+G I +++
Sbjct: 1396 ELNGGSLLKELRRVNVAMSRAKSKLIIIGSKTTIRSVI 1433
>gi|356515310|ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
Length = 3081
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYS---STCTSKSK 60
+GI ++HIG+I Y +Q +L++ +EI+T+D+YQGRDK IL S ST S
Sbjct: 2951 NGIGSEHIGIITPYNSQANLIRNAASMTSLEIHTIDKYQGRDKDCILVSFVRSTENPTSC 3010
Query: 61 ESKILNDRKRLTVAISRAKHKLIILG 86
+ +L D R+ VA++RAK KLI++G
Sbjct: 3011 AASLLGDWHRINVALTRAKKKLIMVG 3036
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++L+ +D I INTVD +QG+++ +IL S ++ +
Sbjct: 524 VGLISPYKAQVQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KLIILGD
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGD 608
>gi|389583617|dbj|GAB66351.1| hypothetical protein PCYB_091370 [Plasmodium cynomolgi strain B]
Length = 1057
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKSIILYSS 53
I HI VI Y Q++LLK +L KDIEI TVD +QGR+K I++ S
Sbjct: 925 ISAKHICVITPYSKQMNLLKNILYDNLYDEKNFTSDYKDIEIATVDSFQGREKEIVILSL 984
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
C++ K L D +RL VAI+RAK ++I+G+ I
Sbjct: 985 VCSNYFKNIGFLKDYRRLNVAITRAKRHVVIVGNSSTI 1022
>gi|238503900|ref|XP_002383182.1| DNA replication helicase Dna2, putative [Aspergillus flavus NRRL3357]
gi|220690653|gb|EED47002.1| DNA replication helicase Dna2, putative [Aspergillus flavus NRRL3357]
Length = 1571
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
GIP IGVI YR+Q+SLLK+ L + D+E++T D++QGRDK +++ S S +
Sbjct: 1372 GIPARSIGVITFYRSQLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRSNSDNHV 1431
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1432 GDLLRDWRRVNVAFTRARTKLLVVG 1456
>gi|357060587|ref|ZP_09121355.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
gi|355375892|gb|EHG23160.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
Length = 640
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
IG+I+ Y+ QV L+ LL K+ I INTVD +QG+++ +IL S +++ E
Sbjct: 520 IGIISPYKAQVQYLRALLKKNAYLRPLRKSITINTVDAFQGQERDVILVSLVRANETGEI 579
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
LND +R+ VAI+RA+ KLIILG
Sbjct: 580 GFLNDLRRMNVAITRARMKLIILG 603
>gi|448306534|ref|ZP_21496438.1| DNA replication factor Dna2 [Natronorubrum bangense JCM 10635]
gi|445597832|gb|ELY51904.1| DNA replication factor Dna2 [Natronorubrum bangense JCM 10635]
Length = 939
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L R + D+ ++TVD++QG + +I+ S T T + E I
Sbjct: 839 AGLERSEIGVIAPFRAQVSELSRHVPDDVTVDTVDRFQGSSQEVIIISFTATG-TLEGPI 897
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 898 FEDYRRINVALTRPKRALVLVGD 920
>gi|55377781|ref|YP_135631.1| DNA helicase [Haloarcula marismortui ATCC 43049]
gi|55230506|gb|AAV45925.1| DNA helicase [Haloarcula marismortui ATCC 43049]
Length = 911
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T ++ +S I
Sbjct: 812 AGVPAADIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVAT-ETLDSPI 869
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 870 FEDYRRINVALTRAKKALVLVGD 892
>gi|340939180|gb|EGS19802.1| DNA replication ATP-dependent helicase dna2-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1848
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 61/95 (64%), Gaps = 11/95 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
++ G+P IGV+ YR+Q++LL+ L D+E++T D++QGRDKS+++ S
Sbjct: 1461 IVVGVPAREIGVVTHYRSQLALLRHTLRGLVAGGDAVVGDVEMHTADRFQGRDKSVVILS 1520
Query: 53 STCTSKSKE-SKILNDRKRLTVAISRAKHKLIILG 86
+++ + ++L D +R+ VA +RAK KL+++G
Sbjct: 1521 LVRSNEQRSIGELLKDWRRVNVAFTRAKRKLLVVG 1555
>gi|224026767|ref|ZP_03645133.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
gi|224020003|gb|EEF78001.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
Length = 607
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ Y+ QV L++LL +D I +NTVD +QG+++ +IL S ++ +
Sbjct: 501 VGLISPYKAQVQYLRQLLKRDPFFKPYRSLITVNTVDGFQGQERDVILISLVRANEDGQI 560
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +R+ VAI+RA+ KLIILGD+ +
Sbjct: 561 GFLSDLRRMNVAITRARMKLIILGDVSTL 589
>gi|83764742|dbj|BAE54886.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1673
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
GIP IGVI YR+Q+SLLK+ L + D+E++T D++QGRDK +++ S S +
Sbjct: 1474 GIPARSIGVITFYRSQLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRSNSDNHV 1533
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1534 GDLLRDWRRVNVAFTRARTKLLVVG 1558
>gi|317138411|ref|XP_001816888.2| DNA replication helicase Dna2 [Aspergillus oryzae RIB40]
Length = 1671
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
GIP IGVI YR+Q+SLLK+ L + D+E++T D++QGRDK +++ S S +
Sbjct: 1472 GIPARSIGVITFYRSQLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRSNSDNHV 1531
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1532 GDLLRDWRRVNVAFTRARTKLLVVG 1556
>gi|357509763|ref|XP_003625170.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355500185|gb|AES81388.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 645
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK L +K DIEI+TVD +QGR+K I+ S ++
Sbjct: 526 SGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSK 585
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+DR+R+ VA++RA+ + I+ D + +
Sbjct: 586 KEVGFLSDRRRMNVAVTRARRQCCIVCDTETV 617
>gi|391863258|gb|EIT72569.1| DNA replication helicase [Aspergillus oryzae 3.042]
Length = 1670
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
GIP IGVI YR+Q+SLLK+ L + D+E++T D++QGRDK +++ S S +
Sbjct: 1471 GIPARSIGVITFYRSQLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRSNSDNHV 1530
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1531 GDLLRDWRRVNVAFTRARTKLLVVG 1555
>gi|435853073|ref|YP_007314392.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
gi|433669484|gb|AGB40299.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
Length = 750
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 11 HIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
+ VI Y++QV L+K+L+ +++E+NTVD +QGR+K +++ S +++ L D +
Sbjct: 647 EVAVITPYKDQVDLIKQLIKLEEVEVNTVDGFQGREKELVILSLVRSNQQDNIGFLRDIR 706
Query: 70 RLTVAISRAKHKLIILGD 87
RL V+++RAK KLIILGD
Sbjct: 707 RLNVSLTRAKKKLIILGD 724
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+ IG+I Y QV L+K+LL D +E+N+VD +QGR+K +I+ S ++ E
Sbjct: 610 GVDKKDIGIITPYAAQVKLIKQLLLEKDLKVEVNSVDGFQGREKEVIIISFVRSNDEGEI 669
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VAI+R K KLI +G+ + +
Sbjct: 670 GFLKDLRRLNVAITRPKRKLIAIGNAETL 698
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILYSSTCT 56
GIP D IGVI Y +Q +LL+++L K +EI +VD++QGR+ I++S +
Sbjct: 732 GIPGDRIGVITPYDSQRTLLRQVLSRHMEKAEEVKKVEIASVDEFQGRENDYIIFSCVRS 791
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ LND +RL VAI+RAK+ ++I+G+
Sbjct: 792 NSDGVLGFLNDMRRLNVAITRAKYGIVIIGN 822
>gi|146423531|ref|XP_001487693.1| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+G+ + IG+I Y +QV ++K++L + +E++TVD +QGR+K IL S ++ E
Sbjct: 589 AGVTAESIGIITPYSSQVGIIKKILQNPAVEVSTVDGFQGREKEAILISLVRSNDEGEIG 648
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D++RL VA++R K L ++GD++++
Sbjct: 649 FLRDKRRLNVAMTRPKRHLCVIGDMELM 676
>gi|401840571|gb|EJT43340.1| HCS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 682
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ D IGVI+ Y QVS LKRL+ +IEI+TVD +QGR+K +I+ S +++
Sbjct: 562 NVQQDSIGVISPYNAQVSHLKRLIHGKLELNNIEISTVDGFQGREKDVIILSLVRSNEEF 621
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +RL VA++R + +L+++G+++V+
Sbjct: 622 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 652
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 11/92 (11%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD-----------IEINTVDQYQGRDKSIILYSSTC 55
PT IGVI Y++QV +K LL + I INTVD +QG++K IIL+S
Sbjct: 1201 FPTQTIGVICAYKSQVRYIKTLLKQKYSDESLFDHSTISINTVDSFQGQEKDIILFSCVR 1260
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+S++ LND +R+ VA++RAK+ L ILG+
Sbjct: 1261 SSQTGGIGFLNDGRRMNVALTRAKNALFILGN 1292
>gi|448659137|ref|ZP_21683105.1| DNA helicase [Haloarcula californiae ATCC 33799]
gi|445760639|gb|EMA11896.1| DNA helicase [Haloarcula californiae ATCC 33799]
Length = 895
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 796 AGVPAADIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPI 853
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 854 FEDYRRINVALTRAKKALVLVGD 876
>gi|68474162|ref|XP_718790.1| hypothetical protein CaO19.6199 [Candida albicans SC5314]
gi|68474333|ref|XP_718706.1| hypothetical protein CaO19.13579 [Candida albicans SC5314]
gi|46440489|gb|EAK99794.1| hypothetical protein CaO19.13579 [Candida albicans SC5314]
gi|46440578|gb|EAK99882.1| hypothetical protein CaO19.6199 [Candida albicans SC5314]
Length = 719
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 14/103 (13%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL------------DKD--IEINTVDQYQGRDKSI 48
L SG+ IGVIA Y QV LK+ + DKD IEI+TVD +QGR+K +
Sbjct: 578 LSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEV 637
Query: 49 ILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+ + ++ S+E L++++RL VA++R K +L ++GDL+++
Sbjct: 638 IILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELM 680
>gi|190345144|gb|EDK36972.2| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+G+ + IG+I Y +QV ++K++L + +E++TVD +QGR+K IL S ++ E
Sbjct: 589 AGVTAESIGIITPYSSQVGIIKKILQNPAVEVSTVDGFQGREKEAILISLVRSNDEGEIG 648
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D++RL VA++R K L ++GD++++
Sbjct: 649 FLRDKRRLNVAMTRPKRHLCVIGDMELM 676
>gi|339249129|ref|XP_003373552.1| DNA replication factor Dna2 family protein [Trichinella spiralis]
gi|316970291|gb|EFV54264.1| DNA replication factor Dna2 family protein [Trichinella spiralis]
Length = 1135
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
SG+ D IGV++ ++ QV ++R L IE+NTVDQYQG+DK +I+ S T + K
Sbjct: 962 SGLDDDEIGVMSIFKTQVECIRRSLKSSGSNGIEVNTVDQYQGKDKDVIIVSFVWTKELK 1021
Query: 61 ES-----KILNDRKRLTVAISRAKHKLIILG 86
+L + +R+ VA++RA+ KLI++G
Sbjct: 1022 RKLNTTCHLLKNARRVNVALTRARKKLILVG 1052
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
+P + I VI+ Y QV LL+ L +E ++VD +QGR++ +++ S +++ E L
Sbjct: 576 MPPEQIAVISPYAAQVRLLRESLPGGVECDSVDGFQGREQEVVICSLVRSNEKGEIGFLA 635
Query: 67 DRKRLTVAISRAKHKLIILGDLQVI 91
D +R+ VA++RAK KLI++GD I
Sbjct: 636 DVRRMNVAMTRAKRKLIVIGDSSTI 660
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii
DSM 2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GI IG+I+ Y +QV+L++ DK IE+ +VD +QGR+K II+ S+ ++K+K+
Sbjct: 549 TGINPKDIGIISPYADQVNLIQ---DKIPIEVKSVDGFQGREKEIIIISTVRSNKNKDIG 605
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 606 FLKDLRRLNVAITRAKRKLIVIGN 629
>gi|303236249|ref|ZP_07322845.1| putative DNA helicase [Prevotella disiens FB035-09AN]
gi|302483563|gb|EFL46562.1| putative DNA helicase [Prevotella disiens FB035-09AN]
Length = 641
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+RL+ K I +NTVD +QG+++ +IL S +++ E
Sbjct: 533 VGVISPYRAQVQYLRRLIKKREFFKPYRALISVNTVDGFQGQERDVILISMVRANENGEI 592
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VAI+RA+ KLIILG+
Sbjct: 593 GFLKDLRRMNVAITRARMKLIILGN 617
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GI IG+I+ Y +QV+L++ DK IE+ +VD +QGR+K II+ S+ ++K+K+
Sbjct: 549 TGINPKDIGIISPYADQVNLIQ---DKIPIEVKSVDGFQGREKEIIIISTVRSNKNKDIG 605
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 606 FLKDLRRLNVAITRAKRKLIVIGN 629
>gi|383810355|ref|ZP_09965851.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
gi|383357100|gb|EID34588.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
Length = 646
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S ++ + +
Sbjct: 541 VGVISPYRAQVQFLRGLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDAGQI 600
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG++Q +
Sbjct: 601 GFLRDLRRMNVAITRARMKLIILGNIQTM 629
>gi|238878861|gb|EEQ42499.1| hypothetical protein CAWG_00711 [Candida albicans WO-1]
Length = 719
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 14/103 (13%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL------------DKD--IEINTVDQYQGRDKSI 48
L SG+ IGVIA Y QV LK+ + DKD IEI+TVD +QGR+K +
Sbjct: 578 LSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEV 637
Query: 49 ILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+ + ++ S+E L++++RL VA++R K +L ++GDL+++
Sbjct: 638 IILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELM 680
>gi|125591443|gb|EAZ31793.1| hypothetical protein OsJ_15947 [Oryza sativa Japonica Group]
Length = 1249
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYS---STCTSKSKES 62
G+ D +G+I Y Q +L+++ +D +E++T+D+YQGRDK I+ S S +++ S
Sbjct: 1120 GVAQDGVGIITPYNAQANLIQQHVDASVEVHTIDKYQGRDKECIIVSFVRSNGNTRASGS 1179
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+L D R+ V ++RAK KLI++G + I
Sbjct: 1180 SLLGDWHRINVVLTRAKKKLIMVGSAATLSTI 1211
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S +++ +
Sbjct: 521 VGVISPYRAQVQYLRSLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNEEGQI 580
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +R+ VAI+RA+ KLIILG++ +
Sbjct: 581 GFLNDLRRMNVAITRARMKLIILGNVATL 609
>gi|302392833|ref|YP_003828653.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
gi|302204910|gb|ADL13588.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
Length = 747
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 10 DHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
+ I VIA Y++QV L+ LD + +E+NTVD +QGR+K +I+ S +++ L D
Sbjct: 643 EDIAVIAPYKDQVELIDDKLDLQGVEVNTVDGFQGREKEVIILSFVRSNEYGNIGFLRDL 702
Query: 69 KRLTVAISRAKHKLIILGDLQVIIA 93
+RL V+++RAK KLI++GD I +
Sbjct: 703 RRLNVSLTRAKRKLIMIGDASTITS 727
>gi|448677737|ref|ZP_21688927.1| DNA helicase [Haloarcula argentinensis DSM 12282]
gi|445773412|gb|EMA24445.1| DNA helicase [Haloarcula argentinensis DSM 12282]
Length = 911
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
+P D IGVIA YR QV+ + + L D+ ++TVD++QG K +I+ S T + +S I
Sbjct: 814 VPADDIGVIAPYRAQVAEISKRL-PDVTVDTVDRFQGSSKEVIVISFVATG-TLDSPIFE 871
Query: 67 DRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 872 DYRRINVALTRAKKALVLVGD 892
>gi|221055858|ref|XP_002259067.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809138|emb|CAQ39840.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1036
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKS 47
M + I HI VI Y Q+ LLK +L KDIEI TVD +QGR+K
Sbjct: 898 MLHVDKISAKHICVITPYSKQMHLLKNILYDNLYGEKNFTSNYKDIEIATVDSFQGREKE 957
Query: 48 IILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I++ S C++ K L D +RL VAI+RAK ++I+G+ I
Sbjct: 958 IVILSLVCSNYFKNIGFLKDYRRLNVAITRAKRHVVIVGNSSTI 1001
>gi|366998597|ref|XP_003684035.1| hypothetical protein TPHA_0A05270 [Tetrapisispora phaffii CBS 4417]
gi|357522330|emb|CCE61601.1| hypothetical protein TPHA_0A05270 [Tetrapisispora phaffii CBS 4417]
Length = 1526
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Query: 5 SGIPTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+P IGV++ YR Q++ +L R + K +EI T DQ+QGRDK I+ S ++K +
Sbjct: 1362 TGVPVSEIGVMSLYRGQINCLQDILTREMSKGLEILTADQFQGRDKKCIIISLVRSNKEQ 1421
Query: 61 ES-KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
S ++ + +R+ VA++RA+ KLII+G ++I ++
Sbjct: 1422 NSGSLMKEMRRINVAMTRARSKLIIIGSKKMIKSV 1456
>gi|255947606|ref|XP_002564570.1| Pc22g05360 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591587|emb|CAP97824.1| Pc22g05360 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1667
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 8/87 (9%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+P +IGVI YR+Q+SL+++ L D+E++T D++QGRDK +I+ S C + E+
Sbjct: 1460 GVPARNIGVITFYRSQLSLIRQSLRSYTPDLEMHTTDKFQGRDKEVIILS--CVRSNAEN 1517
Query: 63 KI---LNDRKRLTVAISRAKHKLIILG 86
+ L D +R+ VA +RA+ KL+++G
Sbjct: 1518 NVGELLRDWRRVNVAFTRAQTKLLVVG 1544
>gi|76802113|ref|YP_327121.1| helicase [Natronomonas pharaonis DSM 2160]
gi|76557978|emb|CAI49563.1| ATP-dependent DNA helicase Dna2 [Natronomonas pharaonis DSM 2160]
Length = 883
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ D IGVIA +R QV+ L R +D ++ ++TVD++QG K +I+ S T + S
Sbjct: 783 LDAGVDPDDIGVIAPFRAQVAELSRRID-EVTVDTVDRFQGSSKEVIIVSFVATGEL-SS 840
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
I D +R+ VA++RAK L+++GD
Sbjct: 841 PIFEDYRRVNVALTRAKKALVLVGD 865
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 11/97 (11%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLL-----------DKDIEINTVDQYQGRDKSIIL 50
S+ PT IGVI Y++QV +K LL + I INTVD +QG+++ IIL
Sbjct: 1224 SIKEEFPTQTIGVICAYKSQVRYIKTLLKQKFQDENIFDENTISINTVDSFQGQEEDIIL 1283
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+S +S++ LND +R+ VA++RAK+ L ILG+
Sbjct: 1284 FSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGN 1320
>gi|302306881|ref|NP_983306.2| ACL098Cp [Ashbya gossypii ATCC 10895]
gi|299788730|gb|AAS51130.2| ACL098Cp [Ashbya gossypii ATCC 10895]
Length = 657
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+P + IGVI+ Y QV+LLK+++ +EI++VD +QGR+K I+ S ++ S +
Sbjct: 540 VPQEAIGVISPYNAQVALLKKIIHGQHPLVEISSVDGFQGREKECIVLSLVRSNDSFDVG 599
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RA+ +L ++G+++ +
Sbjct: 600 FLRDERRLNVAMTRARRQLCVIGNMETL 627
>gi|320037197|gb|EFW19135.1| DNA replication helicase Dna2 [Coccidioides posadasii str. Silveira]
Length = 1660
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GIP IGV+ YR+Q++LL++ L + ++E++T D++QGRDK +I+ S C
Sbjct: 1446 ALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRDKEVIIMS--CVR 1503
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ E+ + L D +R+ VA +RA+ K +I+G
Sbjct: 1504 SNAENNVGELLRDWRRVNVAFTRARTKFLIVG 1535
>gi|146418335|ref|XP_001485133.1| hypothetical protein PGUG_02862 [Meyerozyma guilliermondii ATCC 6260]
Length = 1403
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKS-KES 62
G+P IGV+A YR+Q+ LL + L K +E T DQ+QGRDK ++ S ++K K
Sbjct: 1250 GVPESSIGVMALYRSQLRLLMKGLSDKKSVECLTADQFQGRDKECVVISLVRSNKELKVG 1309
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+L + +R+ VAI+R+K KLIILG ++ +I
Sbjct: 1310 DLLKEWRRINVAITRSKTKLIILGSAAIMKSI 1341
>gi|190346630|gb|EDK38764.2| hypothetical protein PGUG_02862 [Meyerozyma guilliermondii ATCC 6260]
Length = 1403
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKS-KES 62
G+P IGV+A YR+Q+ LL + L K +E T DQ+QGRDK ++ S ++K K
Sbjct: 1250 GVPESSIGVMALYRSQLRLLMKGLSDKKSVECLTADQFQGRDKECVVISLVRSNKELKVG 1309
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+L + +R+ VAI+R+K KLIILG ++ +I
Sbjct: 1310 DLLKEWRRINVAITRSKTKLIILGSAAIMKSI 1341
>gi|119173630|ref|XP_001239227.1| hypothetical protein CIMG_10249 [Coccidioides immitis RS]
Length = 731
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GIP IGV+ YR+Q++LL++ L + ++E++T D++QGRDK +I+ S C
Sbjct: 517 ALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRDKEVIIMS--CVR 574
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ E+ + L D +R+ VA +RA+ K +I+G
Sbjct: 575 SNAENNVGELLRDWRRVNVAFTRARTKFLIVG 606
>gi|303324363|ref|XP_003072169.1| hypothetical protein CPC735_013420 [Coccidioides posadasii C735 delta
SOWgp]
gi|240111879|gb|EER30024.1| hypothetical protein CPC735_013420 [Coccidioides posadasii C735 delta
SOWgp]
Length = 1630
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GIP IGV+ YR+Q++LL++ L + ++E++T D++QGRDK +I+ S C
Sbjct: 1416 ALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRDKEVIIMS--CVR 1473
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ E+ + L D +R+ VA +RA+ K +I+G
Sbjct: 1474 SNAENNVGELLRDWRRVNVAFTRARTKFLIVG 1505
>gi|20093510|ref|NP_613357.1| superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
gi|19886342|gb|AAM01287.1| Superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
Length = 698
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
G+ + + VI+ Y +QV L+ + LD+ D+E+NTVD +QGR+K ++ S ++ E
Sbjct: 565 GLSQEDLAVISPYDDQVDLISKSLDELGLGDVEVNTVDGFQGREKEAVIVSFVRSNPKGE 624
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+R + KLI +GD
Sbjct: 625 VGFLRDMRRLNVAITRPRRKLICIGD 650
>gi|116202197|ref|XP_001226910.1| hypothetical protein CHGG_08983 [Chaetomium globosum CBS 148.51]
gi|88177501|gb|EAQ84969.1| hypothetical protein CHGG_08983 [Chaetomium globosum CBS 148.51]
Length = 1190
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----------DKDIEINTVDQYQGRDKSIILYS 52
L G+P IGV+ YR+Q++LLK L +D+E++T D++QGRDKS+++ S
Sbjct: 952 LAVGVPPSEIGVVTHYRSQLALLKHTLLRSSSGAGGAARDVEMHTADRFQGRDKSVVILS 1011
Query: 53 ST-CTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
+ ++L D +R+ VA +RAK KL+++G
Sbjct: 1012 LVRSNEQCAIGELLKDWRRINVAFTRAKTKLLVVG 1046
>gi|397604601|gb|EJK58719.1| hypothetical protein THAOC_21129, partial [Thalassiosira oceanica]
Length = 651
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 6 GIPTDHIGVIATYRNQV------SLLKRLLDKDIEINTVDQYQGRDKSIILYSST-CTSK 58
G+ IGVI +R+Q+ S LK + +EI T+D++QGRDKS+I+ S ++
Sbjct: 521 GVELSSIGVITPFRSQLRALNEDSTLKESTKQGLEICTIDRFQGRDKSVIVISLVRSNAE 580
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K ++L D +RL VA SRA+ K+I++G L +
Sbjct: 581 GKTGRLLQDFRRLNVAFSRAREKIIVVGSLMTL 613
>gi|383621633|ref|ZP_09948039.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
gi|448702263|ref|ZP_21699917.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
gi|445777633|gb|EMA28594.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
Length = 942
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 842 AGLERSEIGVIAPFRAQVSEISKRVPDDVAVDTVDRFQGSSQEVIVVSFTATG-SLEGPI 900
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 901 FEDYRRINVALTRPKRALVLVGD 923
>gi|443894171|dbj|GAC71521.1| hypothetical protein PANT_3d00079 [Pseudozyma antarctica T-34]
Length = 2022
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 20/104 (19%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD-----------KDIEINTVDQYQGRDKSIILY 51
L +G D IGV+ YR Q+ LL+ L+ +D+EI T DQ QGRDK +I+
Sbjct: 1882 LRAGCIADQIGVVTPYRQQIKLLRSLVATRASGAGRHALEDVEILTADQSQGRDKDVIIV 1941
Query: 52 ---------SSTCTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
SST ++LND +RL V+++R K KLI++G
Sbjct: 1942 TFTRANHGPSSTGARGGSTGELLNDLRRLNVSLTRTKRKLILIG 1985
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 31/129 (24%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRDKSI 48
+ IGVIA Y Q+ LL RLL D I+I TVD ++GR+K +
Sbjct: 855 EDIGVIAPYVAQIRLLTRLLTTDAKSQARFQAALGDQRAMQLPQIDIKTVDGFEGREKDV 914
Query: 49 ILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQ 108
I++S+ ++ S L DR+RL V ++RAK L ++G+L NT + G +G
Sbjct: 915 IIFSTVRSNSSGHVGFLADRRRLNVGLTRAKRGLFVVGNL----------NTLKTGRVGG 964
Query: 109 IPGTDGNRT 117
+ G + +T
Sbjct: 965 VDGMNDPKT 973
>gi|392869438|gb|EJB11783.1| DNA replication helicase Dna2 [Coccidioides immitis RS]
Length = 1659
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GIP IGV+ YR+Q++LL++ L + ++E++T D++QGRDK +I+ S C
Sbjct: 1445 ALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRDKEVIIMS--CVR 1502
Query: 58 KSKESKI---LNDRKRLTVAISRAKHKLIILG 86
+ E+ + L D +R+ VA +RA+ K +I+G
Sbjct: 1503 SNAENNVGELLRDWRRVNVAFTRARTKFLIVG 1534
>gi|240276370|gb|EER39882.1| DNA replication ATP-dependent helicase dna2 [Ajellomyces capsulatus
H143]
gi|325089772|gb|EGC43082.1| DNA replication helicase Dna2 [Ajellomyces capsulatus H88]
Length = 1609
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-- 61
GI IG+I YR+Q+SLLK+ L D+E++T D++QGRDK II+ S C + E
Sbjct: 1394 GISAQDIGIITLYRSQLSLLKQNLRHHPDVEMHTADRFQGRDKEIIIMS--CVRSNSERN 1451
Query: 62 -SKILNDRKRLTVAISRAKHKLIILG 86
++ D +R+ VA +RA+ KL+I+G
Sbjct: 1452 VGELFRDWRRVNVAFTRARTKLLIVG 1477
>gi|241949191|ref|XP_002417318.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640656|emb|CAX44951.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 711
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL--------DKD--IEINTVDQYQGRDKSIILYS 52
L G+ IGVIA Y QV LK+ + DKD IEI+TVD +QGR+K +I+ +
Sbjct: 574 LSCGVRPQDIGVIAPYSAQVQNLKKQMGLGDGANGDKDGQIEISTVDGFQGREKEVIILT 633
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ S+E L++++RL VA++R K +L ++GDL+++
Sbjct: 634 LVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELM 672
>gi|159464225|ref|XP_001690342.1| hypothetical protein CHLREDRAFT_127992 [Chlamydomonas reinhardtii]
gi|158279842|gb|EDP05601.1| predicted protein [Chlamydomonas reinhardtii]
Length = 640
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSSTCTSKSKE 61
GIP HIG+I Y QV+LLK L + + EI++VD +QGR+K IL S ++
Sbjct: 522 GIPPQHIGIITPYNAQVALLKELRAQSVGGALEISSVDGFQGREKEAILVSMVRSNDGGG 581
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+DR+R+ VA++RA+ + D + +
Sbjct: 582 VGFLSDRRRMNVAVTRARRHCAVFCDSETV 611
>gi|402304960|ref|ZP_10824023.1| AAA domain protein [Prevotella sp. MSX73]
gi|400380746|gb|EJP33559.1| AAA domain protein [Prevotella sp. MSX73]
Length = 621
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L++L+ K I +NTVD +QG+++ IIL S ++ +
Sbjct: 514 VGIISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQI 573
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILGD+ +
Sbjct: 574 GFLRDLRRMNVAITRARMKLIILGDVSTL 602
>gi|393220196|gb|EJD05682.1| Dna2-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1181
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+ + IG+I+ YR Q+ LL RLL +K IEI T D+ QGRDK I+ S ++
Sbjct: 1000 LNGGVREEQIGIISLYRQQIKLLSRLLLDNKGIEILTADRSQGRDKDCIIISLVRANEEN 1059
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+ +L D +R+ VA +RA+ KL+I G + + A
Sbjct: 1060 QIGDLLKDWRRINVAFTRARAKLVIFGSRKTLKA 1093
>gi|410079859|ref|XP_003957510.1| hypothetical protein KAFR_0E02220 [Kazachstania africana CBS 2517]
gi|372464096|emb|CCF58375.1| hypothetical protein KAFR_0E02220 [Kazachstania africana CBS 2517]
Length = 1520
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSST-CTS 57
+SGI ++IGV+ YR Q+ LLK+ D+EI T DQ+QGRDK I+ S C S
Sbjct: 1356 VSGINCENIGVMTLYRAQLRLLKKEFRNKEKFSDLEILTADQFQGRDKDCIIISMVRCNS 1415
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L + +R+ VA++RAK KLII+G + I
Sbjct: 1416 DRNGGSLLRELRRVNVAMTRAKSKLIIVGSKKTI 1449
>gi|260593445|ref|ZP_05858903.1| putative helicase [Prevotella veroralis F0319]
gi|260534561|gb|EEX17178.1| putative helicase [Prevotella veroralis F0319]
Length = 646
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S ++ + +
Sbjct: 541 VGVISPYRAQVQYLRGLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDAGQI 600
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG++Q +
Sbjct: 601 GFLRDLRRMNVAITRARMKLIILGNVQTM 629
>gi|365844029|ref|ZP_09384899.1| hypothetical protein HMPREF0372_02710 [Flavonifractor plautii ATCC
29863]
gi|364566637|gb|EHM44321.1| hypothetical protein HMPREF0372_02710 [Flavonifractor plautii ATCC
29863]
Length = 1079
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDK------DIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
IG+I YR Q+ L++ L + +++INTVD +QG + II+YS+ +S + L
Sbjct: 958 IGIITPYRAQLELIRNRLKQIPLSHIEVDINTVDAFQGSQRDIIIYSTVRSSNQRRIGFL 1017
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
+ RL VA SRAK LII+GD
Sbjct: 1018 KEEARLNVAFSRAKRALIIVGD 1039
>gi|345884981|ref|ZP_08836376.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
gi|345042227|gb|EGW46333.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
Length = 656
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S ++ +
Sbjct: 552 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQI 611
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG++Q +
Sbjct: 612 GFLRDLRRMNVAITRARMKLIILGNVQTM 640
>gi|225441756|ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK + + KD+EI+TVD +QGR+K I+ S ++
Sbjct: 528 SGVQASDIGIITPYAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPK 587
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+DR+R+ VA++RA+ + ++ D + +
Sbjct: 588 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 619
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSST 54
L SG+ IGVI Y Q + + L K DIE+ +VD +QGR+K IL S
Sbjct: 174 LNSGLKATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCV 233
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 234 RSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 270
>gi|302345999|ref|YP_003814352.1| hypothetical protein HMPREF0659_A6297 [Prevotella melaninogenica
ATCC 25845]
gi|302149083|gb|ADK95345.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
25845]
Length = 656
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S ++ +
Sbjct: 552 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQI 611
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG++Q +
Sbjct: 612 GFLRDLRRMNVAITRARMKLIILGNVQTM 640
>gi|212542437|ref|XP_002151373.1| DNA replication helicase Dna2, putative [Talaromyces marneffei ATCC
18224]
gi|210066280|gb|EEA20373.1| DNA replication helicase Dna2, putative [Talaromyces marneffei ATCC
18224]
Length = 1670
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
SLIS GI IGVI YR+Q++LL++ L + ++E++T D++QGRDK I++ S ++
Sbjct: 1429 SLISSGISPREIGVITFYRSQLALLRQSLRQYSNELEMHTTDKFQGRDKEIVILSCVRSN 1488
Query: 58 KSKE-SKILNDRKRLTVAISRAKHKLIILG 86
K+ ++L D +R+ VA +RA+ KL+++G
Sbjct: 1489 NDKQVGELLRDWRRINVAFTRARTKLLVIG 1518
>gi|147846685|emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
Length = 649
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK + + KD+EI+TVD +QGR+K I+ S ++
Sbjct: 530 SGVQASDIGIITPYAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPK 589
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+DR+R+ VA++RA+ + ++ D + +
Sbjct: 590 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 621
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IG++ Y Q + LK+ L KDIE+ +VD +QGR+K IL S
Sbjct: 771 SGVMPHQIGIVTPYEGQRAYIANYMLFNGSLKKELYKDIEVASVDAFQGREKDYILLSCV 830
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ L+ILG+ +V+
Sbjct: 831 RSNEHQGIGFLNDPRRLNVALTRAKYGLVILGNPKVL 867
>gi|297739693|emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK + + KD+EI+TVD +QGR+K I+ S ++
Sbjct: 528 SGVQASDIGIITPYAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPK 587
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+DR+R+ VA++RA+ + ++ D + +
Sbjct: 588 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 619
>gi|288803446|ref|ZP_06408878.1| DNA helicase [Prevotella melaninogenica D18]
gi|288334056|gb|EFC72499.1| DNA helicase [Prevotella melaninogenica D18]
Length = 638
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L+ L+ K I +NTVD +QG+++ +IL S ++ +
Sbjct: 534 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQI 593
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG++Q +
Sbjct: 594 GFLRDLRRMNVAITRARMKLIILGNVQTM 622
>gi|315607147|ref|ZP_07882151.1| helicase [Prevotella buccae ATCC 33574]
gi|315251201|gb|EFU31186.1| helicase [Prevotella buccae ATCC 33574]
Length = 634
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L++L+ K I +NTVD +QG+++ IIL S ++ +
Sbjct: 527 VGIISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQI 586
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILGD+ +
Sbjct: 587 GFLRDLRRMNVAITRARMKLIILGDVSTL 615
>gi|288926626|ref|ZP_06420541.1| DNA helicase [Prevotella buccae D17]
gi|288336595|gb|EFC74966.1| DNA helicase [Prevotella buccae D17]
Length = 634
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L++L+ K I +NTVD +QG+++ IIL S ++ +
Sbjct: 527 VGIISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQI 586
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILGD+ +
Sbjct: 587 GFLRDLRRMNVAITRARMKLIILGDVSTL 615
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 8/98 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI--------EINTVDQYQGRDKSIILYSST 54
L +G +HIG+I Y++ +K+++ + E+ +VD +QGR+K II+ S
Sbjct: 530 LKNGAKEEHIGIITPYKDHEEYIKKVISSHLHDFTTSLLEVKSVDGFQGREKEIIILSLV 589
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVII 92
++ +E L+D +RL VAI+RAK KL+I+GD + ++
Sbjct: 590 RANEKEEIGFLSDIRRLNVAITRAKRKLVIIGDAKTLL 627
>gi|226290188|gb|EEH45672.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1524
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD---KDIEINTVDQYQGRDKSIILYSSTCTS 57
S IS GI IGVI YR+Q++LLK+ L D+E++T D++QGRDK II+ S C
Sbjct: 1296 SFISVGISARDIGVITLYRSQLALLKQNLRHYLPDLEMHTADRFQGRDKEIIIMS--CVR 1353
Query: 58 KSKE---SKILNDRKRLTVAISRAKHKLIILG 86
+ E ++ D +R+ VA +RAK KL+I+G
Sbjct: 1354 SNSERNVGELFRDWRRVNVAFTRAKTKLLIIG 1385
>gi|225682750|gb|EEH21034.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1492
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD---KDIEINTVDQYQGRDKSIILYSSTCTS 57
S IS GI IGVI YR+Q++LLK+ L D+E++T D++QGRDK II+ S C
Sbjct: 1264 SFISVGISARDIGVITLYRSQLALLKQNLRHYLPDLEMHTADRFQGRDKEIIIMS--CVR 1321
Query: 58 KSKE---SKILNDRKRLTVAISRAKHKLIILG 86
+ E ++ D +R+ VA +RAK KL+I+G
Sbjct: 1322 SNSERNVGELFRDWRRVNVAFTRAKTKLLIIG 1353
>gi|448399360|ref|ZP_21570657.1| DNA replication factor Dna2 [Haloterrigena limicola JCM 13563]
gi|445668981|gb|ELZ21597.1| DNA replication factor Dna2 [Haloterrigena limicola JCM 13563]
Length = 912
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T + E I
Sbjct: 812 AGLERSEIGVIAPFRAQVSEISNHVPDDVAVDTVDRFQGSSQEVIIVSFTATG-TLEGPI 870
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
D +R+ VA++R K L+++GD Q +
Sbjct: 871 FEDYRRINVALTRPKRALVLVGDAQAL 897
>gi|255711959|ref|XP_002552262.1| KLTH0C00770p [Lachancea thermotolerans]
gi|238933641|emb|CAR21824.1| KLTH0C00770p [Lachancea thermotolerans CBS 6340]
Length = 659
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTS 57
SLI S +P + IG+I+ Y QV+ LK+ + +EI+TVD +QGR+K +I+ S ++
Sbjct: 536 SLIDSNVPQECIGIISPYNAQVAFLKKTVHPQYPLVEISTVDGFQGREKEVIILSLVRSN 595
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L+D++RL VA++R K +L ++G+++ +
Sbjct: 596 DKFEVGFLSDQRRLNVAMTRPKKQLCVIGNMETL 629
>gi|322368849|ref|ZP_08043416.1| ATP-dependent DNA helicase Dna2 [Haladaptatus paucihalophilus
DX253]
gi|320551580|gb|EFW93227.1| ATP-dependent DNA helicase Dna2 [Haladaptatus paucihalophilus
DX253]
Length = 900
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVIA +R QV+ + R + + + ++TVD++QG K +I+ S T +S I
Sbjct: 801 AGVAREDIGVIAPFRAQVAEISRRVHESVAVDTVDRFQGSSKEVIIVSFVATG-DLDSPI 859
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
+D +R+ VA++RAK L+++GD
Sbjct: 860 FDDYRRVNVALTRAKKSLVLVGD 882
>gi|448329415|ref|ZP_21518714.1| DNA replication factor Dna2 [Natrinema versiforme JCM 10478]
gi|445613921|gb|ELY67607.1| DNA replication factor Dna2 [Natrinema versiforme JCM 10478]
Length = 912
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 812 AGLERSEIGVIAPFRAQVSEISKHVPDDVAVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 870
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 871 FEDYRRINVALTRPKRALVLVGD 893
>gi|15898288|ref|NP_342893.1| hypothetical protein SSO1456 [Sulfolobus solfataricus P2]
gi|284173623|ref|ZP_06387592.1| hypothetical protein Ssol98_03083 [Sulfolobus solfataricus 98/2]
gi|13814681|gb|AAK41683.1| Hypothetical protein SSO1456 [Sulfolobus solfataricus P2]
Length = 139
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 17/105 (16%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTC 55
LIS + +GVI+ YR QV R LD++ +E+NTVD +QGR+K +I++S T
Sbjct: 43 LISKLIGQDVGVISPYRTQV----RKLDQELANYKPYVEVNTVDAFQGREKDVIIFSVTA 98
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNT 100
T+ + + +R+RL VA +R ++KLI+LG+ +I++C T
Sbjct: 99 TNG---LRFVTNRRRLNVAFTRPRYKLIVLGNEN---SIMSCQMT 137
>gi|257388158|ref|YP_003177931.1| DNA replication factor Dna2 [Halomicrobium mukohataei DSM 12286]
gi|257170465|gb|ACV48224.1| DNA replication factor Dna2 [Halomicrobium mukohataei DSM 12286]
Length = 934
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +GI ++ +GVIA YR QV+ + + + + + ++TVD++QG K +I+ S T S +
Sbjct: 833 LAAGIESEAVGVIAPYRAQVAEIDKHVPEGVTVDTVDRFQGSSKEVIVVSFVATG-SLDG 891
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
I D +R+ VA++RAK L+++GD
Sbjct: 892 PIFEDYRRINVALTRAKKALVLVGD 916
>gi|336372180|gb|EGO00519.1| hypothetical protein SERLA73DRAFT_178352 [Serpula lacrymans var.
lacrymans S7.3]
Length = 189
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSK 58
L+SG+P +GVI+ YR Q+ LL +L+ K +E+ TVD+ QGRDK ++ S +++
Sbjct: 102 LLSGVPVGEVGVISLYRQQLKLLVSMLEGRGGKGVEVITVDRSQGRDKDCVIVSMVRSNE 161
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIIL 85
+ + +++ D +RL VA +RA+ KL+++
Sbjct: 162 NGQIGELIKDWRRLNVAFTRARKKLVVI 189
>gi|300711188|ref|YP_003737002.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|448296711|ref|ZP_21486764.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|299124871|gb|ADJ15210.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|445580843|gb|ELY35213.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
Length = 903
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK-ESK 63
+G+P + IGVIA +R QV+ + + + + + ++TVD++QG K +IL S ++ + E
Sbjct: 801 AGVPPEEIGVIAPFRAQVATITQTVREGVAVDTVDRFQGSSKEVILVSFVASTPADLEGP 860
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
I +D +RL VA++RAK L ++G
Sbjct: 861 IFDDYRRLNVALTRAKKSLGLVG 883
>gi|359489182|ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
Length = 1438
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKE--- 61
GI + IG+I Y +Q +L++ + +EINT+D+YQGRDK IL S +S++
Sbjct: 1309 GIEGEDIGIITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDCILVSFVRSSENPRNCT 1368
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S +L D R+ VA++RAK KLI++G + +
Sbjct: 1369 SSLLGDWHRINVALTRAKRKLIMVGSFRTL 1398
>gi|213409063|ref|XP_002175302.1| DNA replication ATP-dependent helicase dna2 [Schizosaccharomyces
japonicus yFS275]
gi|212003349|gb|EEB09009.1| DNA replication ATP-dependent helicase dna2 [Schizosaccharomyces
japonicus yFS275]
Length = 1178
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
G+ IGVI YR+QV L+R+L ++EINT D+YQGRDK +IL S ++ +
Sbjct: 1026 GLEQKAIGVITIYRSQVYCLRRVLSDFPEVEINTADKYQGRDKDVILLSFVRSNPNDSVG 1085
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D KR+ V ++RAK K I+ G
Sbjct: 1086 ELLKDWKRINVILTRAKTKCIMFG 1109
>gi|367011180|ref|XP_003680091.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
gi|359747749|emb|CCE90880.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
Length = 667
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S + + IGVIA Y QV++LK L + IEI+TVD +QGR+K +I+ S ++ E
Sbjct: 548 SNVSQNSIGVIAPYSAQVTILKHFLSEKFPQIEISTVDGFQGREKEVIILSLVRSNDKFE 607
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++R K +L ++G+++ +
Sbjct: 608 IGFLKDERRLNVAMTRPKKQLCVIGNIETL 637
>gi|449437623|ref|XP_004136591.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449501878|ref|XP_004161482.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 647
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK L KDIEI+TVD +QGR+K I+ S ++
Sbjct: 528 SGVQPSDIGIITPYAAQVVLLKTLRSNDDKLKDIEISTVDGFQGREKEAIIISMVRSNSK 587
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
KE L+DR+R+ VA++RA+ + ++ D
Sbjct: 588 KEVGFLSDRRRMNVAVTRARRQCCLVCD 615
>gi|435848041|ref|YP_007310291.1| DNA/RNA helicase, superfamily I [Natronococcus occultus SP4]
gi|433674309|gb|AGB38501.1| DNA/RNA helicase, superfamily I [Natronococcus occultus SP4]
Length = 932
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG K +I+ S T T S E I
Sbjct: 832 AGLDRADIGVIAPFRAQVSTISSHVPADVAVDTVDRFQGSSKELIIVSFTATG-SLEGPI 890
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGR 102
D +R+ VA++R K L+++GD + A+ + P GR
Sbjct: 891 FEDYRRINVALTRPKRALVLVGDSR---ALSSDPVYGR 925
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 14/101 (13%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SGI D IG+I Y Q + L L ++IE+ +VD +QGR+K IIL S
Sbjct: 732 LRSGIRADQIGIITPYEGQRAYIVQHMLLSGPLNNKLYQEIEVASVDAFQGREKDIILLS 791
Query: 53 STCTSKSKESKI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
C ++ S I LND +RL VA++RA++ LII+G+ +V+
Sbjct: 792 --CVRSNEHSGIGFLNDPRRLNVALTRARYGLIIVGNPKVL 830
>gi|402085725|gb|EJT80623.1| DNA replication ATP-dependent helicase dna2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1716
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCT 56
G+P IGV+ YR+Q++LL+ L + +E++T D++QGRDK +++ S
Sbjct: 1490 GVPASEIGVMTHYRSQLALLRHKLHRGSSRPGQAAAVEMHTADRFQGRDKEVVVLSLVRN 1549
Query: 57 SKS-KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ K ++L D +R+ VA +RAK KL+++G L+ +
Sbjct: 1550 NEDCKIGELLRDWRRINVAFTRAKTKLLVIGSLETL 1585
>gi|47196036|emb|CAF89197.1| unnamed protein product [Tetraodon nigroviridis]
Length = 233
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYS---STCTSKSK 60
P D IGVIA YR Q+ + LL +E+NTVD+YQGRDKS+IL S ST
Sbjct: 127 PGD-IGVIAPYRQQLRTISGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPV 185
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
+ +RL VAI+RAK KL++LG
Sbjct: 186 TGRAAEGLRRLNVAITRAKSKLLMLGS 212
>gi|374106511|gb|AEY95420.1| FACL098Cp [Ashbya gossypii FDAG1]
Length = 657
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+P + IGVI+ Y QV+LLK+ + +EI++VD +QGR+K I+ S ++ S +
Sbjct: 540 VPQEAIGVISPYNAQVALLKKTIHGQHPLVEISSVDGFQGREKECIVLSLVRSNDSFDVG 599
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RA+ +L ++G+++ +
Sbjct: 600 FLRDERRLNVAMTRARRQLCVIGNMETL 627
>gi|448369174|ref|ZP_21555941.1| helicase [Natrialba aegyptia DSM 13077]
gi|445651717|gb|ELZ04625.1| helicase [Natrialba aegyptia DSM 13077]
Length = 960
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L + + +++ ++TVD++QG + +I+ S T T S E I
Sbjct: 860 AGLDAADIGVIAPFRAQVSELSKHVPEEVAVDTVDRFQGSSQEVIIVSFTATD-SLEGPI 918
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 919 FEDYRRINVALTRPKRALVLVGD 941
>gi|393219539|gb|EJD05026.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 791
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 27/115 (23%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD--------------------IEINTVDQYQGRDKSII 49
+ IGVIA Y++Q++LL RLL KD IE+ TVD ++GR+K I
Sbjct: 621 EDIGVIAPYKSQMNLLTRLLKKDDEVRDHFKAHLGDRALEVPNIEVKTVDGFEGREKQAI 680
Query: 50 LYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYG 104
++S+ ++ L DR+RL V ++RAK L ++G + + G+YG
Sbjct: 681 IFSTVRNNQFGHIGFLADRRRLNVGLTRAKRALFVVGSMSTL-------ERGKYG 728
>gi|170030078|ref|XP_001842917.1| DNA-binding protein smubp-2 [Culex quinquefasciatus]
gi|167865923|gb|EDS29306.1| DNA-binding protein smubp-2 [Culex quinquefasciatus]
Length = 708
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I Y QV LK LL+ KDIE+ + +QYQGR+K I+L ST + SK L D
Sbjct: 544 IGIITPYARQVRYLKDLLNMRGWKDIEVGSTEQYQGREKPIMLM-STVRTGSKSVGFLAD 602
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
KRL V+++RA+ +I++GD + +
Sbjct: 603 TKRLNVSLTRAQALMIVVGDPETL 626
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSST 54
L SG+ IGVI Y Q + + L K DIE+ +VD +QGR+K IL S
Sbjct: 413 LNSGLKATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCV 472
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 473 RSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 509
>gi|170030082|ref|XP_001842919.1| potentail helicase MOV-10 [Culex quinquefasciatus]
gi|167865925|gb|EDS29308.1| potentail helicase MOV-10 [Culex quinquefasciatus]
Length = 708
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I Y QV LK LL+ KDIE+ + +QYQGR+K I+L ST + SK L D
Sbjct: 544 IGIITPYARQVRYLKDLLNMRGWKDIEVGSTEQYQGREKPIMLM-STVRTGSKSVGFLAD 602
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
KRL V+++RA+ +I++GD + +
Sbjct: 603 TKRLNVSLTRAQALMIVVGDPETL 626
>gi|448300390|ref|ZP_21490392.1| DNA replication factor Dna2 [Natronorubrum tibetense GA33]
gi|445586119|gb|ELY40405.1| DNA replication factor Dna2 [Natronorubrum tibetense GA33]
Length = 912
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+GI IGVIA +R QVS + + D+ ++TVD++QG + II+ S T T S E I
Sbjct: 812 AGINRTDIGVIAPFRAQVSEITSHVPDDVSVDTVDRFQGSSQEIIIVSFTATG-SLEGPI 870
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 871 FEDYRRINVALTRPKRALVLVGD 893
>gi|403367834|gb|EJY83741.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1199
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 18/92 (19%)
Query: 12 IGVIATYRNQVSLLK------------RLLDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
IG+I Y++QV +LK RL +DIEINTVD YQGR+K II+++ ++ S
Sbjct: 935 IGIITPYKSQVKILKDQIAPWLRSIGSRL--QDIEINTVDAYQGREKDIIIFNCVRSNSS 992
Query: 60 KESK----ILNDRKRLTVAISRAKHKLIILGD 87
+ K L D++R+ VAI+RAKH L ++G+
Sbjct: 993 NQLKNSLGFLVDKRRMNVAITRAKHFLFVVGN 1024
>gi|448361846|ref|ZP_21550459.1| helicase [Natrialba asiatica DSM 12278]
gi|445649526|gb|ELZ02463.1| helicase [Natrialba asiatica DSM 12278]
Length = 957
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L + + ++ ++TVD++QG + +I+ S T T S E I
Sbjct: 857 AGLSPADIGVIAPFRAQVSELSKHVPAEVAVDTVDRFQGSSQEVIIVSFTATD-SLEGPI 915
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
+D +R+ VA++R K L+++GD
Sbjct: 916 FDDYRRINVALTRPKRALVLVGD 938
>gi|296425104|ref|XP_002842083.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638341|emb|CAZ86274.1| unnamed protein product [Tuber melanosporum]
Length = 711
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
+ +G+ + IGV+ Y QVSL+ +LL +E+NTVD +QGR+K +++S ++
Sbjct: 574 IAAGVRPEDIGVLTPYSAQVSLITKLLRGTYPAVEVNTVDSFQGREKEAVVFSLVRSNDK 633
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L D++R+ VA++R + L ++GD + +
Sbjct: 634 GEVGFLKDKRRVNVAVTRPRCHLCVVGDAETV 665
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV LL +++ + I +NTVD +QG+++ II+ S + KE
Sbjct: 515 VGIISPYRAQVQLLHKMIRQSEFFRPYRRAISVNTVDGFQGQERDIIVISLVRNNDGKEI 574
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
L D +R+ VAI+RA+ KLIILG + A
Sbjct: 575 GFLRDLRRMNVAITRARMKLIILGSAATMTA 605
>gi|361131543|gb|EHL03216.1| putative DNA replication ATP-dependent helicase dna2 [Glarea
lozoyensis 74030]
Length = 197
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSK 58
SL+S GI IGV+ YR+Q++LLK L + D+E++T D++QGRDK +I+ S ++
Sbjct: 65 SLLSVGIDASSIGVMTHYRSQLALLKHNLRQHADVEMHTADRFQGRDKEVIILSLVRSNP 124
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 125 AHSIGELLKDWRRINVAFTRAKTKLLVIGSRETL 158
>gi|302753268|ref|XP_002960058.1| hypothetical protein SELMODRAFT_451020 [Selaginella moellendorffii]
gi|300170997|gb|EFJ37597.1| hypothetical protein SELMODRAFT_451020 [Selaginella moellendorffii]
Length = 1249
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 GIPTDHIGVIATYRNQVSLLK-RLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
G+ T +GVI+ Y+ QV ++ R+ D D+E++T+D+YQG+DK IL S +
Sbjct: 1077 GVDTRSVGVISPYKGQVDYIRQRISDNGAGLADVEVHTIDKYQGKDKDCILVSFALSEDH 1136
Query: 60 KE-SKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+ +L D R+ VAI+RAK KLI++G ++ + +I
Sbjct: 1137 RVLGSLLTDWHRINVAITRAKKKLIMIGSMKALSSI 1172
>gi|407926213|gb|EKG19182.1| DNA replication factor Dna2 [Macrophomina phaseolina MS6]
Length = 1462
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
+ +G+P IG+I YR+Q++LL+ L +E++T D++QGRDK +++ S C +
Sbjct: 1233 ITTGVPASEIGIITFYRSQLALLRHALRHRTPALELHTADKFQGRDKEVVIVS--CVRNN 1290
Query: 60 KE---SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++L D +R+ VA++RA+ KL+++G + +
Sbjct: 1291 EQCNVGELLKDWRRVNVAVTRARSKLVLVGSKKTL 1325
>gi|397627810|gb|EJK68624.1| hypothetical protein THAOC_10178, partial [Thalassiosira oceanica]
Length = 546
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 6 GIPTDHIGVIATYRNQV------SLLKRLLDKDIEINTVDQYQGRDKSIILYSST-CTSK 58
G+ IGVI +R+Q+ S LK + +EI T+D++QGRDKS+I+ S ++
Sbjct: 416 GVELSSIGVITPFRSQLRALNEDSTLKESTRQGLEICTIDRFQGRDKSVIVISLVRSNAE 475
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K ++L D +RL VA SRA+ K+I++G L +
Sbjct: 476 GKTGRLLQDFRRLNVAFSRAREKIIVVGSLMTL 508
>gi|397647009|gb|EJK77518.1| hypothetical protein THAOC_00647, partial [Thalassiosira oceanica]
Length = 602
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 6 GIPTDHIGVIATYRNQV------SLLKRLLDKDIEINTVDQYQGRDKSIILYSST-CTSK 58
G+ IGVI +R+Q+ S LK + +EI T+D++QGRDKS+I+ S ++
Sbjct: 472 GVELSSIGVITPFRSQLRALNEDSTLKESTKQGLEICTIDRFQGRDKSVIVISLVRSNAE 531
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K ++L D +RL VA SRA+ K+I++G L +
Sbjct: 532 GKTGRLLQDFRRLNVAFSRAREKIIVVGSLMTL 564
>gi|433590254|ref|YP_007279750.1| DNA/RNA helicase, superfamily I [Natrinema pellirubrum DSM 15624]
gi|433305034|gb|AGB30846.1| DNA/RNA helicase, superfamily I [Natrinema pellirubrum DSM 15624]
Length = 925
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 825 AGLERSDIGVIAPFRAQVSEISSTVPDDVTVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 883
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 884 FEDYRRINVALTRPKRALVLVGD 906
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 765 SGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCV 824
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 825 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 861
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 765 SGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCV 824
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 825 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 861
>gi|346323715|gb|EGX93313.1| DNA replication helicase Dna2, putative [Cordyceps militaris CM01]
Length = 1570
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L GIP +GV+ YR+Q+SLLK L +E++T D++QGRDK +I+ S ++ +
Sbjct: 1367 LTVGIPASEVGVMTHYRSQLSLLKDKLKGYPGVEMHTTDRFQGRDKEVIVLSLVRSNDAC 1426
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 1427 HIGELLRDWRRINVAFTRAKTKLLVIG 1453
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 765 SGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCV 824
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 825 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 861
>gi|331231179|ref|XP_003328253.1| hypothetical protein PGTG_09547 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309307243|gb|EFP83834.1| hypothetical protein PGTG_09547 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1326
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRL--LDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
G+P IG+IA YR Q+ LL L ++EI T D+ QGRDK I+ S + +E
Sbjct: 1119 GVPASEIGIIAPYRQQIKLLTSLSHAHPELEILTADKSQGRDKDCIIMSMVRNNAEEEVG 1178
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L D +R+ V ++RAK KL++ G Q +
Sbjct: 1179 ELLKDWRRINVCLTRAKRKLVLFGSKQTL 1207
>gi|336253852|ref|YP_004596959.1| DNA replication factor Dna2 [Halopiger xanaduensis SH-6]
gi|335337841|gb|AEH37080.1| DNA replication factor Dna2 [Halopiger xanaduensis SH-6]
Length = 918
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 818 AGLERSEIGVIAPFRAQVSEISAHVPDDVAVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 876
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGR 102
D +R+ VA++R K L+++GD A+ P GR
Sbjct: 877 FEDYRRINVALTRPKRALVLVGDSN---ALATDPVYGR 911
>gi|258647098|ref|ZP_05734567.1| DNA helicase [Prevotella tannerae ATCC 51259]
gi|260853046|gb|EEX72915.1| DNA helicase [Prevotella tannerae ATCC 51259]
Length = 1099
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 11/92 (11%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK--------- 60
D IG+I YRNQ++L+K L+ D ++TV++YQG ++ II+Y T +++
Sbjct: 984 DTIGIIVPYRNQIALIKAQLEDDHTVDTVERYQGSERPIIIYGFTVHRQAQLNFLTANRF 1043
Query: 61 -ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E+ L DRK L VA++RAK +L ++G+ Q++
Sbjct: 1044 EENGALIDRK-LNVALTRAKEQLFLVGNPQLL 1074
>gi|156098326|ref|XP_001615195.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804069|gb|EDL45468.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1089
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKSIILYSS 53
I HI VI Y Q++LLK + KDIEI TVD +QGR+K I++ S
Sbjct: 957 ISAKHICVITPYSKQMNLLKNIFYDNLYEEKNFTSDYKDIEIATVDSFQGREKEIVILSL 1016
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
C++ K L D +RL VAI+RAK ++++G+ I
Sbjct: 1017 VCSNYFKNIGFLKDYRRLNVAITRAKRHVVVVGNSSTI 1054
>gi|302804656|ref|XP_002984080.1| hypothetical protein SELMODRAFT_451029 [Selaginella moellendorffii]
gi|300148432|gb|EFJ15092.1| hypothetical protein SELMODRAFT_451029 [Selaginella moellendorffii]
Length = 1181
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 GIPTDHIGVIATYRNQVSLLK-RLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
G+ T +GVI+ Y+ QV ++ R+ D D+E++T+D+YQG+DK IL S +
Sbjct: 1058 GVDTRSVGVISPYKGQVDYIRQRISDNGAGLADVEVHTIDKYQGKDKDCILVSFALSEDH 1117
Query: 60 KE-SKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+ +L D R+ VAI+RAK KLI++G ++ + +I
Sbjct: 1118 RVLGSLLTDWHRINVAITRAKKKLIMIGSMKALSSI 1153
>gi|115389560|ref|XP_001212285.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194681|gb|EAU36381.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1518
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD---KDIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
G+P IGVI YR+Q+SLLK+ L ++E++T D++QGRDK +++ S S +
Sbjct: 1384 GVPARSIGVITFYRSQLSLLKQNLRHHLPELEMHTADKFQGRDKEVVILSCVRSNSDNNV 1443
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ KL+++G
Sbjct: 1444 GDLLRDWRRVNVAFTRARTKLLVVG 1468
>gi|448345669|ref|ZP_21534558.1| DNA replication factor Dna2 [Natrinema altunense JCM 12890]
gi|445633602|gb|ELY86789.1| DNA replication factor Dna2 [Natrinema altunense JCM 12890]
Length = 911
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 811 AGLDRSEIGVIAPFRAQVSEISSRVPDDVTVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 869
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 870 FEDYRRINVALTRPKRALVLVGD 892
>gi|448332339|ref|ZP_21521583.1| DNA replication factor Dna2 [Natrinema pellirubrum DSM 15624]
gi|445627443|gb|ELY80767.1| DNA replication factor Dna2 [Natrinema pellirubrum DSM 15624]
Length = 954
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 854 AGLERSDIGVIAPFRAQVSEISSTVPDDVTVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 912
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 913 FEDYRRINVALTRPKRALVLVGD 935
>gi|242768912|ref|XP_002341663.1| DNA replication helicase Dna2, putative [Talaromyces stipitatus ATCC
10500]
gi|218724859|gb|EED24276.1| DNA replication helicase Dna2, putative [Talaromyces stipitatus ATCC
10500]
Length = 1657
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
SGI IGVI YR+Q+SLL++ L + ++E++T D++QGRDK I++ S ++ K+
Sbjct: 1433 SGISPREIGVITFYRSQLSLLRQSLRQYSTELEMHTTDKFQGRDKEIVILSCVRSNNDKQ 1492
Query: 62 -SKILNDRKRLTVAISRAKHKLIILG 86
+L D R+ VA +RA+ KL+++G
Sbjct: 1493 VGDLLRDWHRINVAFTRARTKLLVIG 1518
>gi|449018313|dbj|BAM81715.1| probable tRNA splicing endonuclease positive effector Sen1p
[Cyanidioschyzon merolae strain 10D]
Length = 1250
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Query: 11 HIGVIATYRNQVSLLKRLLDKD------------IEINTVDQYQGRDKSIILYSSTCTSK 58
H+G++ YR Q+ LL++ LD+ IEI+TVD +QGR+K +I++S+ T++
Sbjct: 890 HLGILTPYRAQMRLLQQALDQSGLILPGQQMPCTIEIDTVDAFQGREKDVIIFSAVRTAQ 949
Query: 59 SKES-KILNDRKRLTVAISRAKHKLIILG 86
+ + D +RL VA++RAK L++LG
Sbjct: 950 HRSGIGFVGDVRRLNVALTRAKVSLVVLG 978
>gi|297734699|emb|CBI16750.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKE--- 61
GI + IG+I Y +Q +L++ + +EINT+D+YQGRDK IL S +S++
Sbjct: 567 GIEGEDIGIITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDCILVSFVRSSENPRNCT 626
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S +L D R+ VA++RAK KLI++G + +
Sbjct: 627 SSLLGDWHRINVALTRAKRKLIMVGSFRTL 656
>gi|147846002|emb|CAN84171.1| hypothetical protein VITISV_028526 [Vitis vinifera]
Length = 315
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKE--- 61
GI + IG+I Y +Q +L++ + +EINT+D+YQGRDK IL S +S++
Sbjct: 186 GIEGEDIGIITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDCILVSFVRSSENPRNCT 245
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S +L D R+ VA++RAK KLI++G + +
Sbjct: 246 SSLLGDWHRINVALTRAKRKLIMVGSFRTL 275
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L SG+ + IGVI Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 757 LRSGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMS 816
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 817 CVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 855
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L SG+ + IGVI Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 752 LRSGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMS 811
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 812 CVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 850
>gi|448353256|ref|ZP_21542033.1| helicase [Natrialba hulunbeirensis JCM 10989]
gi|445640833|gb|ELY93919.1| helicase [Natrialba hulunbeirensis JCM 10989]
Length = 973
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + R + + + ++TVD++QG + +I+ S T T ++ E I
Sbjct: 873 AGLDPSDIGVIAPFRAQVSEISRHVPEAVAVDTVDRFQGSSQEVIIVSFTAT-RTLEGPI 931
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
+D +R+ VA++R K L+++GD
Sbjct: 932 FDDYRRINVALTRPKRALVLVGD 954
>gi|365984805|ref|XP_003669235.1| hypothetical protein NDAI_0C03320 [Naumovozyma dairenensis CBS 421]
gi|343768003|emb|CCD23992.1| hypothetical protein NDAI_0C03320 [Naumovozyma dairenensis CBS 421]
Length = 1502
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSST-CTS 57
L SG+ +D +GV+ YR Q+ LLK++L +EI T DQ+QGRDK I+ S +
Sbjct: 1329 LTSGVSSDKVGVMTLYRAQLKLLKKVLGSAAYDGLEILTADQFQGRDKDCIIISMVRSNA 1388
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQ 108
+L + +R+ VA++RAK KLII+G + I +I P + NL Q
Sbjct: 1389 HLNGGSLLKELRRVNVAMTRAKSKLIIIGSQKTISSI---PEIKGFMNLLQ 1436
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 711 SGVLPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCV 770
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 771 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 807
>gi|396462466|ref|XP_003835844.1| hypothetical protein LEMA_P051850.1 [Leptosphaeria maculans JN3]
gi|312212396|emb|CBX92479.1| hypothetical protein LEMA_P051850.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 22/101 (21%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-----------------DKDIEINTVDQYQGRDKSI 48
G+ + IG+IA YR+Q++LL++ L +E++T D++QGRDK +
Sbjct: 1497 GVSANEIGIIAFYRSQLALLRQSLASAHTQTQSSELGISAGSAGVELHTADKFQGRDKEV 1556
Query: 49 ILYSSTCTSKSKES---KILNDRKRLTVAISRAKHKLIILG 86
+L S C +++ ++L DR+R+ VA++RA+ KLI+LG
Sbjct: 1557 VLVS--CVRSNEDGVVGELLKDRRRINVALTRARSKLILLG 1595
>gi|448410070|ref|ZP_21575019.1| DNA replication factor Dna2 [Halosimplex carlsbadense 2-9-1]
gi|445672350|gb|ELZ24926.1| DNA replication factor Dna2 [Halosimplex carlsbadense 2-9-1]
Length = 914
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P IGVIA +R QV+ + + + + ++TVD++QG K +I+ S T S +S I
Sbjct: 815 AGVPAGEIGVIAPFRAQVAEIGKHVPDAVAVDTVDRFQGSSKEVIVISFVATG-SLDSPI 873
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ V ++RAK L+++GD
Sbjct: 874 FEDYRRVNVGLTRAKKALVLVGD 896
>gi|448348645|ref|ZP_21537493.1| helicase [Natrialba taiwanensis DSM 12281]
gi|445642306|gb|ELY95374.1| helicase [Natrialba taiwanensis DSM 12281]
Length = 975
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L + + ++ ++TVD++QG + +I+ S T T S E I
Sbjct: 875 AGLDAADIGVIAPFRAQVSELSKHVPDEVAVDTVDRFQGSSQEVIIVSFTATD-SLEGPI 933
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 934 FEDYRRINVALTRPKRALVLVGD 956
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 724 SGVLPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCV 783
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 784 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 820
>gi|448356664|ref|ZP_21545391.1| helicase [Natrialba chahannaoensis JCM 10990]
gi|445652776|gb|ELZ05659.1| helicase [Natrialba chahannaoensis JCM 10990]
Length = 988
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + R + + + ++TVD++QG + +I+ S T T + E I
Sbjct: 887 AGLDPSDIGVIAPFRAQVSEISRHVPESVAVDTVDRFQGSSQEVIIVSFTATG-TLEGPI 945
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
+D +R+ VA++R K L+++GD
Sbjct: 946 FDDYRRINVALTRPKRALVLVGD 968
>gi|238600751|ref|XP_002395227.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
gi|215465596|gb|EEB96157.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
Length = 311
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGV+ Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 71 SGVVPNQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEVEVASVDAFQGREKDYIILSCV 130
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 131 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 167
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI D IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 769 LKAGIKPDQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMS 828
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 829 CVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 867
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L SG+ + IG+I Y Q + L + + +DIEI +VD +QGR+K +I+ S
Sbjct: 761 LRSGVKPEQIGIITPYEGQRAYLVQYMQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ LND +RL VA++RA++ +II+G+ +V+
Sbjct: 821 CVRSNENQGIGFLNDPRRLNVAMTRARYGIIIVGNPKVL 859
>gi|390595320|gb|EIN04726.1| Dna2-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1162
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+ D IGVI+ YR Q+ LL LL IEI T D+ QGRDK I+ S KS
Sbjct: 981 LAGGVREDQIGVISLYRQQIKLLSHLLQDHSGIEILTADRSQGRDKDCIIISMV---KSN 1037
Query: 61 ES----KILNDRKRLTVAISRAKHKLIILG 86
ES +++ D +R+ V+++RA+ KLII G
Sbjct: 1038 ESGAVGELVKDWRRVNVSVTRARSKLIIFG 1067
>gi|315042666|ref|XP_003170709.1| DNA replication ATP-dependent helicase dna2 [Arthroderma gypseum CBS
118893]
gi|311344498|gb|EFR03701.1| DNA replication ATP-dependent helicase dna2 [Arthroderma gypseum CBS
118893]
Length = 1595
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI IGV+ YR+Q+SLLK+ L D+E++T D++QGRDK +I+ S ++ +
Sbjct: 1385 GIAAQDIGVVTLYRSQLSLLKQKLRHHGADLEMHTADRFQGRDKEVIIMSCVRSNSDRNV 1444
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1445 GDLLRDWRRVNVAFTRARTKMLIVG 1469
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ D IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 772 LKAGVKPDQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMS 831
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 832 CVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 870
>gi|227539751|ref|ZP_03969800.1| possible DNA helicase [Sphingobacterium spiritivorum ATCC 33300]
gi|227240393|gb|EEI90408.1| possible DNA helicase [Sphingobacterium spiritivorum ATCC 33300]
Length = 199
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 11 HIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+IG+I+ YR QV LLK L+ D +++ T+D +QG+++ II S T ++ +
Sbjct: 86 NIGLISPYRQQVLLLKELIRNDEMKISVPVQVQTIDGFQGQERDIIYISLTRSNAEGQIG 145
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LN+ +R+ VA++RA++KLII+GD
Sbjct: 146 FLNEIRRMNVAMTRARYKLIIIGD 169
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGVI Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 749 SGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 808
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 809 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 845
>gi|356504807|ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LLK L +K D+EI+TVD +QGR+K I+ S ++
Sbjct: 529 SGVLPSDIGIITPYAAQVVLLKMLKNKEDQLKDVEISTVDGFQGREKEAIIISMVRSNSK 588
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+DR+R+ VA++R++ + ++ D + +
Sbjct: 589 KEVGFLSDRRRMNVAVTRSRRQCCLVCDTETV 620
>gi|282877092|ref|ZP_06285934.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
gi|281300774|gb|EFA93101.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
Length = 659
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L+RL+ K I +NTVD +QG+++ +IL S ++ +
Sbjct: 549 VGIISPYRAQVQYLRRLIKKRPFFKPFRHLISVNTVDGFQGQERDVILISLVRANEDGQI 608
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVII 92
L D +R+ VA++RA+ KLIILG + ++
Sbjct: 609 GFLRDLRRMNVAMTRARMKLIILGHVPTLV 638
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 62/99 (62%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----VSLLKR------LLDKDIEINTVDQYQGRDKSIILYS 52
L G+ IGVI Y Q V+ ++R L KD+E+ +VD +QGR+K +I+ S
Sbjct: 761 LKCGVLPAQIGVITPYEGQRAYVVNYMQRNGSMRAQLYKDVEVASVDSFQGREKDLIILS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L+DR+RL VA++RAK+ +IILG+ +V+
Sbjct: 821 CVRSNENQGIGFLSDRRRLNVALTRAKYGVIILGNPRVL 859
>gi|335438999|ref|ZP_08561724.1| DNA replication factor Dna2 [Halorhabdus tiamatea SARL4B]
gi|334889306|gb|EGM27594.1| DNA replication factor Dna2 [Halorhabdus tiamatea SARL4B]
Length = 902
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ +GVIA YR QV+ + + + + ++TVD++QG K ++L S T S +
Sbjct: 801 LTAGVDPGDVGVIAPYRAQVAEIGQRVPDGVTVDTVDRFQGSSKEVVLVSFVATG-SLDG 859
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
I D +R+ VA++RAK L+++GD + +
Sbjct: 860 PIFEDYRRINVALTRAKRALVLIGDAEAL 888
>gi|308805667|ref|XP_003080145.1| putative DNA helicase (ISS) [Ostreococcus tauri]
gi|116058605|emb|CAL54312.1| putative DNA helicase (ISS) [Ostreococcus tauri]
Length = 1305
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+P D IGVI Y QV+LL+ L +D +EI+TVD +QGR+K I+ S+ ++ E
Sbjct: 1189 VPVDEIGVITPYNGQVTLLRELRARDDALKNLEISTVDGFQGREKEAIIISAVRSNTRGE 1248
Query: 62 SKILNDRKRLTVAISRA-KHKLIIL 85
L+D +R+ VA++RA KH +I+
Sbjct: 1249 VGFLSDSRRMNVAVTRARKHCCLII 1273
>gi|403367086|gb|EJY83352.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1679
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLK----RLLDKD------IEINTVDQYQGRDKSIIL 50
M I G +G+I+ Y++QV LK L K+ IEINTVD YQGR+K II+
Sbjct: 1323 MKHILGDLRQRVGIISPYKSQVRTLKDYMYPFLKKNGFPIDLIEINTVDAYQGREKDIII 1382
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYG 104
S S+ ++ LND +R+ VA++RA+H L ++G+ + N N Y
Sbjct: 1383 ISCVRGSQERQLGFLNDYRRMNVAVTRARHFLWVVGNSTTLNRNKNWNNFVEYS 1436
>gi|409083838|gb|EKM84195.1| hypothetical protein AGABI1DRAFT_104147 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1333
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSST-CTSKS 59
++ G+ + +G+I YR Q+ L+ LL KD+EI T D+ QGRDK ++++S
Sbjct: 1134 IMGGVSPEEVGIITLYRQQLKLISHLLGERKDVEILTADRSQGRDKEVVIFSMVRSNDDG 1193
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ ++ D +R+ V+ +RA+ KLII G + +
Sbjct: 1194 RTGDLIKDWRRMNVSFTRARSKLIIFGSRRTL 1225
>gi|448321866|ref|ZP_21511341.1| DNA replication factor Dna2 [Natronococcus amylolyticus DSM 10524]
gi|445602918|gb|ELY56889.1| DNA replication factor Dna2 [Natronococcus amylolyticus DSM 10524]
Length = 919
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ +GVIA +R QVS + R + + + ++TVD++QG K +I+ S T T + E I
Sbjct: 819 AGVDPADVGVIAPFRAQVSEISRHVPEGVAVDTVDRFQGSSKEVIIVSFTATG-TLEGPI 877
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 878 FEDYRRINVALTRPKRALVLVGD 900
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGVI Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 765 SGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCV 824
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +R+ VA++RAK+ ++ILG+ +V+
Sbjct: 825 RSNEHQGIGFLNDPRRMNVALTRAKYGVVILGNPKVL 861
>gi|86451930|gb|ABC97360.1| UPF1 [Streblomastix strix]
Length = 277
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 19/110 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----LKRLLD---------------KDIEINTVDQYQG 43
LI+G+ IG+I Y+ Q+S KR+ D +D+++ +VD +QG
Sbjct: 102 LINGVKAKDIGIITPYKLQISCIIDQFKRVADNSQSQNGRGLPYETYQDVQVASVDAFQG 161
Query: 44 RDKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
R+K I++S +++ K LND +RL VAI+RA++ LII+G+ + + +
Sbjct: 162 REKDFIIFSCVRSNERKGIGFLNDPRRLNVAITRARYGLIIIGNAKCLFS 211
>gi|452207608|ref|YP_007487730.1| ATP-dependent DNA helicase Dna2 [Natronomonas moolapensis 8.8.11]
gi|452083708|emb|CCQ37022.1| ATP-dependent DNA helicase Dna2 [Natronomonas moolapensis 8.8.11]
Length = 883
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ D IGVIA +R QV+ + R L + ++TVD++QG K +++ S T T S
Sbjct: 783 LDAGVDPDDIGVIAPFRAQVAEISRRL-SGVAVDTVDRFQGSAKEVVVISFTATG-DLSS 840
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
I D +R+ VA++RAK L+++GD
Sbjct: 841 PIFEDHRRVNVALTRAKRSLVLVGD 865
>gi|255571556|ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 644
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
G+ IG+I Y QV LLK L KD+EI+TVD +QGR+K I+ S ++ K
Sbjct: 526 GVQASDIGIITPYAAQVVLLKILRSNEDKLKDVEISTVDGFQGREKEAIIISMVRSNSKK 585
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L+DR+R+ VA++RA+ + ++ D + +
Sbjct: 586 EVGFLSDRRRMNVAVTRARRQCCLVCDTETV 616
>gi|258570319|ref|XP_002543963.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904233|gb|EEP78634.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1408
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTS 57
+LIS GI IGV+ YR+Q++LLK+ L D+E++T D++QGRDK +I+ S ++
Sbjct: 1209 ALISTGISPREIGVVTLYRSQLALLKQKLRHHLPDLEMHTADRFQGRDKEVIIMSCVRSN 1268
Query: 58 KSKE-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RA+ KL+I+G
Sbjct: 1269 ADHNVGELLRDWRRVNVAFTRARTKLLIVG 1298
>gi|254168450|ref|ZP_04875294.1| hypothetical protein ABOONEI_2618 [Aciduliprofundum boonei T469]
gi|197622505|gb|EDY35076.1| hypothetical protein ABOONEI_2618 [Aciduliprofundum boonei T469]
Length = 633
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 12 IGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKR 70
IG+IA YR Q + L ++K+ IEINT+D +QGR+K +I+ T TSK K + +R R
Sbjct: 516 IGIIAPYRAQRNKLHEKINKNGIEINTIDAFQGREKDLIILDITGTSKHT-LKFVGNRNR 574
Query: 71 LTVAISRAKHKLIILGDLQVI 91
L VA++RA+ KLI++G+ + I
Sbjct: 575 LNVAVTRARKKLIVVGNYRSI 595
>gi|300122655|emb|CBK23222.2| unnamed protein product [Blastocystis hominis]
Length = 422
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTS-KSKESK 63
G+ ++ IG+I+ Y QV+ ++ ++ DK IEI+TVD +QGR+K I+ S + K K
Sbjct: 326 GVSSESIGIISPYNAQVAYIQSVIGDKSIEISTVDSFQGREKECIIISLVRNNRKQKIGT 385
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA SRA KLII+G
Sbjct: 386 LLKDWRRINVAFSRATRKLIIIG 408
>gi|448117828|ref|XP_004203352.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|448120264|ref|XP_004203935.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|359384220|emb|CCE78924.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|359384803|emb|CCE78338.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
Length = 1491
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKR-LLDK-DIEINTVDQYQGRDKSIILYSST-CTSKSKES 62
G+ +GV++ YR+Q+ LL R L D+ D+EI T DQ+QGRDK I+ S ++ K
Sbjct: 1331 GVKESQVGVMSLYRSQLRLLHRKLTDRTDVEILTADQFQGRDKDCIIISLVRSNTQQKVG 1390
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L + +R+ VAI+R+K KLIILG
Sbjct: 1391 DLLKEWRRVNVAITRSKSKLIILG 1414
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L++L+ K I +NTVD +QG+++ +IL S + +
Sbjct: 531 VGVISPYRAQVQYLRKLIRKRKFFKPYRHLITVNTVDGFQGQERDVILISMVRANDEGQI 590
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG+ + +
Sbjct: 591 GFLKDLRRMNVAITRARMKLIILGNAETM 619
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLK-RLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L GI IG+I YR QV LL+ +L D +EI++VD +QGR+K I+ S ++
Sbjct: 649 LALGIAPSQIGLITPYRAQVRLLREKLADVPGLEIDSVDGFQGREKEAIVVSLVRSNNEG 708
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L+D +R VA +RA+ KL+++GD
Sbjct: 709 EIGFLSDTRRTNVAFTRARRKLLVIGD 735
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGV+ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 756 SGVVPNQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 815
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 816 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 852
>gi|153007203|ref|YP_001381528.1| superfamily I DNA/RNA helicase [Anaeromyxobacter sp. Fw109-5]
gi|152030776|gb|ABS28544.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. Fw109-5]
Length = 651
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
L G+ + VI+ Y QV L++LL D+ +E++TVD +QGR+K ++ S ++
Sbjct: 529 LAQGLDPAEVAVISPYDAQVQRLRQLLAAHLDRGLEVDTVDGFQGREKDAVVVSLVRANE 588
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGD 87
+ E L D +R+ VA++RA+ KL+++GD
Sbjct: 589 TGEVGFLADVRRMNVALTRARMKLVVVGD 617
>gi|363750954|ref|XP_003645694.1| hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889328|gb|AET38877.1| Hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
Length = 663
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S + + IG+I+ Y QVSLL++L+ + IEI++VD +QGR+K I+ S ++ E
Sbjct: 544 SNVSQESIGIISPYNAQVSLLRKLVHEKYSLIEISSVDGFQGREKDCIILSLVRSNDLFE 603
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RAK +L ++G+++ +
Sbjct: 604 VGFLRDERRLNVAMTRAKRQLCVIGNMETL 633
>gi|284992098|ref|YP_003410652.1| RecB family nuclease [Geodermatophilus obscurus DSM 43160]
gi|284065343|gb|ADB76281.1| RecB family nuclease, putative [Geodermatophilus obscurus DSM 43160]
Length = 1082
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK--- 63
I D + V+A Y NQV+L++R L + TVD++QG++ +++YS T TS +
Sbjct: 968 IGPDDVLVVAPYNNQVALIRRALPDGARVGTVDKFQGQEAPVVIYSMTSTSAEDAPRGVS 1027
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGN 105
L D RL VA+SRAK +++ +++ A V P R N
Sbjct: 1028 FLYDLHRLNVAVSRAKALAVVVMSEELLDAAVRTPEQLRQVN 1069
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGVI Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 758 SGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 817
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 818 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 854
>gi|440631839|gb|ELR01758.1| hypothetical protein GMDG_00134 [Geomyces destructans 20631-21]
Length = 1673
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
G+P IGV+ YR+Q++LLK L +++E++T D++QGRDK +++ S ++++
Sbjct: 1476 GVPGSEIGVMTHYRSQLALLKHNLRSHQEVEMHTCDRFQGRDKEVVVISLVRSNEAGGIG 1535
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 1536 ELLRDWRRINVAFTRAKTKLLVVG 1559
>gi|414871608|tpg|DAA50165.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 341
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 222 SGVNASDIGIITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSK 281
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D++ +
Sbjct: 282 KEVGFLSDHRRMNVAVTRARRQCCLVCDVETV 313
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGVI Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 739 SGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 798
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 799 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 835
>gi|326505658|dbj|BAJ95500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S +++
Sbjct: 531 SGVRASDIGIITPYSAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNQK 590
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D + +
Sbjct: 591 KEVGFLSDHRRMNVAVTRARRQCCVVCDAETV 622
>gi|242038955|ref|XP_002466872.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
gi|241920726|gb|EER93870.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
Length = 650
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 531 SGVNASDIGIITPYSAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSK 590
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D++ +
Sbjct: 591 KEVGFLSDHRRMNVAVTRARRQCCLVCDVETV 622
>gi|260939808|ref|XP_002614204.1| hypothetical protein CLUG_05690 [Clavispora lusitaniae ATCC 42720]
gi|238852098|gb|EEQ41562.1| hypothetical protein CLUG_05690 [Clavispora lusitaniae ATCC 42720]
Length = 733
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRL--LDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+ IGVI+ Y Q +LL+++ + +E+ TVD +QGR+K I+ S ++ ++E
Sbjct: 616 AGVDAASIGVISPYSAQTALLRKMACMFGPVEVATVDGFQGREKEAIVLSLVRSNDNREV 675
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
L DR+RL VA++R K L ++GD+ ++ A
Sbjct: 676 GFLQDRRRLNVAMTRPKRHLCVVGDMALLDA 706
>gi|336366511|gb|EGN94858.1| hypothetical protein SERLA73DRAFT_61821 [Serpula lacrymans var.
lacrymans S7.3]
Length = 801
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 21/118 (17%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IG+IA Y Q+SLL RLL+ +IEI TVD ++GR+K +I+
Sbjct: 629 IGIIAPYAAQISLLTRLLNTNAKYHTRFKNALGDHRVMQLSNIEIKTVDGFEGREKEVII 688
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQ 108
+S+ + S L DR+RL V ++RAK L ++G + + A + G G GQ
Sbjct: 689 FSTVRNNTSGYIGFLADRRRLNVGLTRAKRGLFVVGSISTLKAGKLSKSNGNTGVEGQ 746
>gi|409042883|gb|EKM52366.1| hypothetical protein PHACADRAFT_186519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 953
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 21/106 (19%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRD 45
+P IG+IA Y Q++LL RLL D +EI TVD ++GR+
Sbjct: 732 LPGSQIGIIAPYAAQITLLTRLLTIDKNYAERFESVLGPQRAMDLANVEIKTVDGFEGRE 791
Query: 46 KSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K +I++S+ + + L DR+RL V ++RAK L ++G + +
Sbjct: 792 KEVIIFSTVRNNSNGHIGFLADRRRLNVGLTRAKRGLFVVGSISTL 837
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSST 54
L +G+ IGVI Y Q + + L K DIE+ +VD +QGR+K IL S
Sbjct: 979 LNAGLKATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCV 1038
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 1039 RSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 1075
>gi|448341327|ref|ZP_21530289.1| DNA replication factor Dna2 [Natrinema gari JCM 14663]
gi|445628374|gb|ELY81682.1| DNA replication factor Dna2 [Natrinema gari JCM 14663]
Length = 921
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG +++I+ S T T S E I
Sbjct: 821 AGLDRTDIGVIAPFRAQVSEISAHVPDDVAVDTVDRFQGSSQNVIIVSFTATG-SLEGPI 879
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 880 FEDYRRINVALTRPKRALVLVGD 902
>gi|310798654|gb|EFQ33547.1| DNA replication factor Dna2 [Glomerella graminicola M1.001]
Length = 1618
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR+Q+SLLK L +E++T D++QGRDK +++ S +++S
Sbjct: 1416 LTVGVPDGEIGVMTHYRSQLSLLKHGLRGHLGVEMHTADRFQGRDKDVVILSLVRSNESC 1475
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 1476 SIGELLKDWRRINVAFTRAKTKLLVVG 1502
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S L K+ L K+IE+ +VD +QGR+K ++ S
Sbjct: 776 AGVMPSQIGIITPYEGQRSYLVSYMQMNGSLKKELYKEIEVASVDAFQGREKDYVIMSCV 835
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ L+ILG+ +V+
Sbjct: 836 RSNEHQGIGFLNDPRRLNVALTRAKYGLVILGNPKVL 872
>gi|294659465|ref|XP_002770589.1| DEHA2G06820p [Debaryomyces hansenii CBS767]
gi|199433984|emb|CAR65924.1| DEHA2G06820p [Debaryomyces hansenii CBS767]
Length = 1531
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSK-SKES 62
G+ IGV++ YR+Q+ LL R L D+E+ T DQ+QGRDK I+ S ++K +K
Sbjct: 1368 GVKESSIGVMSLYRSQLRLLHRGLSHKPDVEVLTADQFQGRDKDCIIISLVRSNKDNKVG 1427
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
+L + +R+ VAI+R+K KLIILG
Sbjct: 1428 DLLKEWRRVNVAITRSKSKLIILG 1451
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
G+ D IGVI Y Q +S+ LLDK D+EI +VD +QGR+K I+ S
Sbjct: 753 GVTPDQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDFIILSC 812
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ ++ L+D +RL VA++RAK+ LI+LG+
Sbjct: 813 VRANDAQSIGFLSDPRRLNVALTRAKYGLIVLGN 846
>gi|224029893|gb|ACN34022.1| unknown [Zea mays]
gi|414871609|tpg|DAA50166.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 646
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 527 SGVNASDIGIITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSK 586
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D++ +
Sbjct: 587 KEVGFLSDHRRMNVAVTRARRQCCLVCDVETV 618
>gi|397773773|ref|YP_006541319.1| DNA replication factor Dna2 [Natrinema sp. J7-2]
gi|397682866|gb|AFO57243.1| DNA replication factor Dna2 [Natrinema sp. J7-2]
Length = 921
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG +++I+ S T T S E I
Sbjct: 821 AGLDRTDIGVIAPFRAQVSEISAHVPDDVAVDTVDRFQGSSQNVIIVSFTATG-SLEGPI 879
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 880 FEDYRRINVALTRPKRALVLVGD 902
>gi|392567172|gb|EIW60347.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 788
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ I VI Y+ QV+LL LL ++EI TVD QGR+K I+ S +++ +
Sbjct: 672 AGVQPSQIAVITPYQAQVTLLTSLLRPIFGAELEIGTVDGMQGREKEAIVISLVRSNEKR 731
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L D++RL VA++RA+ L ++GD
Sbjct: 732 EVGFLKDKRRLNVAMTRARRHLCVVGD 758
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ L KD+E+ +VD +QGR+K I+ S
Sbjct: 760 AGVKPSEIGVITPYEGQRSYIVSTMQNSGTYKKELYKDVEVASVDAFQGREKDFIVLSCV 819
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 820 RSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 856
>gi|289580739|ref|YP_003479205.1| helicase [Natrialba magadii ATCC 43099]
gi|448284404|ref|ZP_21475664.1| helicase [Natrialba magadii ATCC 43099]
gi|289530292|gb|ADD04643.1| helicase [Natrialba magadii ATCC 43099]
gi|445570739|gb|ELY25298.1| helicase [Natrialba magadii ATCC 43099]
Length = 986
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + R + + + ++TVD++QG + +I+ S T T + E I
Sbjct: 886 AGLDPSDIGVIAPFRAQVSEISRHVPEAVAVDTVDRFQGSSQEVIIVSFTATG-TLEGPI 944
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
+D +R+ VA++R K L+++GD
Sbjct: 945 FDDYRRINVALTRPKRALVLVGD 967
>gi|400596952|gb|EJP64696.1| DNA replication factor Dna2 [Beauveria bassiana ARSEF 2860]
Length = 1569
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR+Q+SLLK L +E++T D++QGRDK +I+ S ++ +
Sbjct: 1366 LTVGVPASEIGVMTHYRSQLSLLKDKLKGYPGVEMHTTDRFQGRDKEVIVLSLVRSNDAC 1425
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1426 NIGDLLRDWRRINVAFTRAKTKLLVIG 1452
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IGV+ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 748 SGVVPNQIGVVTPYEGQRSYIVNYMQFNGTLKKDLYKEIEVASVDAFQGREKDYIILSCV 807
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 808 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 844
>gi|226530450|ref|NP_001146778.1| uncharacterized protein LOC100280381 [Zea mays]
gi|219888715|gb|ACL54732.1| unknown [Zea mays]
Length = 274
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 155 SGVNASDIGIITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSK 214
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D++ +
Sbjct: 215 KEVGFLSDHRRMNVAVTRARRQCCLVCDVETV 246
>gi|15221015|ref|NP_172361.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
gi|332190235|gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
Length = 1296
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYS---STCTSKSKE 61
G+ + IG+I Y +Q SL++ + +EI+T+D+YQGRDK IL S S +S
Sbjct: 1178 GVDSKDIGIITPYNSQASLIQHAIPTTPVEIHTIDKYQGRDKDCILVSFVRSREKPRSSA 1237
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
S +L D R+ VA++RAK KLI++G
Sbjct: 1238 SSLLGDWHRINVALTRAKKKLIMVG 1262
>gi|380476222|emb|CCF44832.1| DNA replication ATP-dependent helicase dna2 [Colletotrichum
higginsianum]
Length = 856
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR+Q+SLLK L +E++T D++QGRDK +++ S ++++
Sbjct: 711 LTVGVPDGEIGVMTHYRSQLSLLKHGLRGHVGVEMHTADRFQGRDKDVVILSLVRSNENC 770
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 771 SIGELLKDWRRINVAFTRAKTKLLVIG 797
>gi|334182404|ref|NP_001184943.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
gi|332190236|gb|AEE28357.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
Length = 1315
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYS---STCTSKSKE 61
G+ + IG+I Y +Q SL++ + +EI+T+D+YQGRDK IL S S +S
Sbjct: 1197 GVDSKDIGIITPYNSQASLIQHAIPTTPVEIHTIDKYQGRDKDCILVSFVRSREKPRSSA 1256
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
S +L D R+ VA++RAK KLI++G
Sbjct: 1257 SSLLGDWHRINVALTRAKKKLIMVG 1281
>gi|451848026|gb|EMD61332.1| hypothetical protein COCSADRAFT_95990 [Cochliobolus sativus ND90Pr]
Length = 314
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 29/112 (25%)
Query: 1 MSLIS-GIPTDHIGVIATYRNQVSLLKRLLDKD---------------------IEINTV 38
+SL+S G+ D IG+IA YR+Q++LL++ L +E++T
Sbjct: 72 VSLLSLGVAVDEIGIIAFYRSQLALLRQGLAAAYTQTQSSELSALVISGQGCAGVELHTA 131
Query: 39 DQYQGRDKSIILYSSTCTSKSKESKI----LNDRKRLTVAISRAKHKLIILG 86
D++QGRDK +++ S +S E+ I L DR+R+ VA++RA+ KLIILG
Sbjct: 132 DKFQGRDKEVVIVSCV---RSNENGIVGDLLKDRRRINVALTRARSKLIILG 180
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L++ L K I INTVD +QG+++ II+ S + +
Sbjct: 435 VGVISPYRAQVQYLRQQLKKREFFKPFKSLISINTVDGFQGQERDIIMISLVRANDEGQI 494
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VAI+RA+ KLIILGD
Sbjct: 495 GFLRDLRRMNVAITRARMKLIILGD 519
>gi|357121239|ref|XP_003562328.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 652
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 533 SGVLASDIGIITPYSAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSK 592
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + I+ D + +
Sbjct: 593 KEVGFLSDHRRMNVAVTRARRQCCIVCDAETV 624
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 859
>gi|356570496|ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
IP+D IG+I Y QV LLK L +K D+EI+TVD +QGR+K I+ S ++ KE
Sbjct: 532 IPSD-IGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKE 590
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +R+ VA++R++ + ++ D + +
Sbjct: 591 VGFLSDHRRMNVAVTRSRRQCCLVSDTETV 620
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 859
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GI IG+I+ Y +QV+L++ DK IE+ +VD +QGR+K II+ S+ ++K+
Sbjct: 549 TGINPKDIGIISPYADQVNLIQ---DKIPIEVKSVDGFQGREKEIIIISTVRSNKNGNIG 605
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 606 FLKDLRRLNVAITRAKRKLIVIGN 629
>gi|395333482|gb|EJF65859.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 794
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ I VI Y+ QV+LL LL ++EI TVD QGR+K ++ S +++ +
Sbjct: 678 AGVLPSQIAVITPYQAQVTLLTSLLRPIYGPELEIGTVDGMQGREKEAVIISLVRSNEKR 737
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L D++RL VA++RA+ L I+GD
Sbjct: 738 EVGFLKDKRRLNVAMTRARRHLCIIGD 764
>gi|154287262|ref|XP_001544426.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408067|gb|EDN03608.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1332
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSST-CTSKSKES 62
GI IG++ YR+Q+SLLK+ L ++E++T D++QGRDK II+ S S+
Sbjct: 1117 GISAQDIGIVTLYRSQLSLLKQNLRHHPNVEMHTADRFQGRDKEIIIMSCVRSNSERNVG 1176
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++ D +R+ VA +RA+ KL+I+G
Sbjct: 1177 ELFRDWRRVNVAFTRARTKLLIIG 1200
>gi|448518588|ref|ZP_21617665.1| DNA replication factor Dna2 [Halorubrum distributum JCM 10118]
gi|445705169|gb|ELZ57073.1| DNA replication factor Dna2 [Halorubrum distributum JCM 10118]
Length = 898
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D +GVIA +R QV+ + R D+ ++TVD++QG K +IL S T + I
Sbjct: 800 AGVDPDDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVILVSFVATG-DLDGPI 856
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L I+GD
Sbjct: 857 FEDHRRVNVALTRAKKQLTIVGD 879
>gi|448507880|ref|ZP_21615180.1| DNA replication factor Dna2 [Halorubrum distributum JCM 9100]
gi|445697817|gb|ELZ49874.1| DNA replication factor Dna2 [Halorubrum distributum JCM 9100]
Length = 898
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D +GVIA +R QV+ + R D+ ++TVD++QG K +IL S T + I
Sbjct: 800 AGVDPDDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVILVSFVATG-DLDGPI 856
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L I+GD
Sbjct: 857 FEDHRRVNVALTRAKKQLTIVGD 879
>gi|302408086|ref|XP_003001878.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
VaMs.102]
gi|261359599|gb|EEY22027.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
VaMs.102]
Length = 1446
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
SL++ G+P IGV+ YR+Q++LLK L +E++TVD++QGRDK +++ S ++
Sbjct: 1245 SLVAVGVPETEIGVMTHYRSQLALLKHGLRGHPSVEMHTVDRFQGRDKEVVVLSLVRSND 1304
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ +L D +R+ VA +RAK KL+++G + +
Sbjct: 1305 ACAIGDLLKDWRRINVAFTRAKTKLLVVGSRETL 1338
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----VSLLKR------LLDKDIEINTVDQYQGRDKSIILYS 52
L +G+ IGVI Y Q VS ++R L KD+E+ +VD +QGR+K +I+ S
Sbjct: 416 LKAGVLPSQIGVITPYEGQRAYVVSYMQRNGPLRSQLYKDVEVASVDSFQGREKDLIILS 475
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L+D +RL VA++RAK+ +I+LG+ +V+
Sbjct: 476 CVRSNENQGIGFLSDERRLNVALTRAKYGVILLGNPRVL 514
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 859
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYS 52
L +G+ + IGVI Y Q + L + L K+IE+ +VD +QGR+K I+ S
Sbjct: 813 LQAGVTSAQIGVITPYEGQRAYLVNYMQRNGSLRSQLYKEIEVASVDSFQGREKDFIILS 872
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +++LG+ +V+
Sbjct: 873 CVRSNEHQGIGFLNDPRRLNVALTRAKYGVVVLGNAKVL 911
>gi|302502578|ref|XP_003013253.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
gi|291176816|gb|EFE32613.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
Length = 1597
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI + IGV+ YR+Q+SLLK+ L +E++T D++QGRDK II+ S ++ +
Sbjct: 1386 GIAAEDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQGRDKEIIIMSCVRSNSDRNV 1445
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1446 GDLLRDWRRVNVAFTRARTKMLIVG 1470
>gi|332878015|ref|ZP_08445745.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357047737|ref|ZP_09109335.1| putative DNA helicase [Paraprevotella clara YIT 11840]
gi|332683977|gb|EGJ56844.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355529425|gb|EHG98859.1| putative DNA helicase [Paraprevotella clara YIT 11840]
Length = 659
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV LL+ LL +D + +NTVD +QG+++ +IL S ++++ +
Sbjct: 553 GIISPYKGQVQLLRALLRRDAFFKPYRHLLSVNTVDGFQGQERDVILISLVRSNENGQIG 612
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VAI+RA+ KLI++G+
Sbjct: 613 FLHDLRRMNVAITRARMKLILVGN 636
>gi|448338500|ref|ZP_21527547.1| DNA replication factor Dna2 [Natrinema pallidum DSM 3751]
gi|445622814|gb|ELY76259.1| DNA replication factor Dna2 [Natrinema pallidum DSM 3751]
Length = 911
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + D+ ++TVD++QG + +I+ S T T S E I
Sbjct: 811 AGLDRADIGVIAPFRAQVSEISAHVPDDVAVDTVDRFQGSSQEVIIVSFTATG-SLEGPI 869
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 870 FEDYRRINVALTRPKRALVLVGD 892
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGV+ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 753 SGVVPSQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 812
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 813 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 849
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRDKSI 48
D IG+IA Y Q+SLL RLL+ D +E+ TVD ++GR K +
Sbjct: 951 DDIGIIAPYAAQISLLTRLLNTDAKYARRFAATLGDRRVRELSKVEVRTVDGFEGRQKDV 1010
Query: 49 ILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I++S+ + + L DR+RL V ++RAK L ++G + +
Sbjct: 1011 IIFSTVRNNPAGHVGFLADRRRLNVGLTRAKRGLFVVGSISTL 1053
>gi|342319237|gb|EGU11187.1| DNA replication helicase Dna2, putative [Rhodotorula glutinis ATCC
204091]
Length = 1334
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
SG+ + IGVI+ YR Q+ LL R L +EI T D+ QGRDK I+ S ++ S +
Sbjct: 1176 SGVDEEEIGVISLYRQQIKLLSRQLSSHPGVEILTADRSQGRDKECIVLSLVRSNTSGNA 1235
Query: 63 -KILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ V ++RAK KL+I G I
Sbjct: 1236 GDLLKDWRRINVCLTRAKSKLVIFGSRSTI 1265
>gi|449546124|gb|EMD37094.1| hypothetical protein CERSUDRAFT_155577 [Ceriporiopsis subvermispora
B]
Length = 803
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ I +I Y+ QV+L LL D+EI TVD QGR+K ++ S +++ +
Sbjct: 687 AGVLASQIAIITPYQAQVALFTTLLRPAYGPDLEIGTVDGMQGREKDAVIISLVRSNEKR 746
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L D++RL VA++RAK L I+GD
Sbjct: 747 EVGFLKDKRRLNVAMTRAKRHLCIVGD 773
>gi|325860214|ref|ZP_08173339.1| hypothetical protein HMPREF9303_0593 [Prevotella denticola CRIS
18C-A]
gi|325482301|gb|EGC85309.1| hypothetical protein HMPREF9303_0593 [Prevotella denticola CRIS
18C-A]
Length = 639
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L+ L+ K + +NTVD +QG+++ +IL S +++ +
Sbjct: 534 VGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQI 593
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG+++ +
Sbjct: 594 GFLRDLRRMNVAITRARMKLIILGNVRTM 622
>gi|169608259|ref|XP_001797549.1| hypothetical protein SNOG_07199 [Phaeosphaeria nodorum SN15]
gi|160701604|gb|EAT85850.2| hypothetical protein SNOG_07199 [Phaeosphaeria nodorum SN15]
Length = 1484
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 26/110 (23%)
Query: 1 MSLIS-GIPTDHIGVIATYRNQVSLLKRLLDK--------------------DIEINTVD 39
+SL+S G+ + +G+IA YR+Q++LL+ L +E++T D
Sbjct: 1258 VSLLSLGVSANEVGIIAFYRSQLALLRTSLSSAHTQTQASELAAPAVGPGCAGVELHTAD 1317
Query: 40 QYQGRDKSIILYSSTCTSKSKES---KILNDRKRLTVAISRAKHKLIILG 86
++QGRDK +++ S C ++ S +L DR+R+ VA++RA+ KLIILG
Sbjct: 1318 KFQGRDKEVVIVS--CVRSNENSIVGDLLKDRRRVNVALTRARSKLIILG 1365
>gi|444911442|ref|ZP_21231617.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718200|gb|ELW59016.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 273
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKR---LLDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +GI + VI YR Q L+ L D+E++TVD +QGR+K IL S ++
Sbjct: 150 LAAGIAPRELAVITPYRAQAHALRERVEPLSPDVEVDTVDAFQGREKDAILVSLVRSNSE 209
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
+ L+D +R+ VA++RA+ L ++GD
Sbjct: 210 GQIGFLSDLRRMNVALTRARRHLFVVGD 237
>gi|327312657|ref|YP_004328094.1| hypothetical protein HMPREF9137_0361 [Prevotella denticola F0289]
gi|326944641|gb|AEA20526.1| conserved hypothetical protein [Prevotella denticola F0289]
Length = 639
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L+ L+ K + +NTVD +QG+++ +IL S +++ +
Sbjct: 534 VGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQI 593
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG+++ +
Sbjct: 594 GFLRDLRRMNVAITRARMKLIILGNVRTM 622
>gi|330942276|ref|XP_003306133.1| hypothetical protein PTT_19173 [Pyrenophora teres f. teres 0-1]
gi|311316527|gb|EFQ85773.1| hypothetical protein PTT_19173 [Pyrenophora teres f. teres 0-1]
Length = 1673
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 23/109 (21%)
Query: 1 MSLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---------------------DIEINTV 38
+SL+S G+ D IG+IA YR+Q+++L++ L +E++T
Sbjct: 1427 VSLLSLGVTADEIGIIAFYRSQLAMLRQSLSSAYTQTQSSELAAPAISGQGCAGVELHTA 1486
Query: 39 DQYQGRDKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILG 86
D++QGRDK +++ S ++++ +L DR+R+ VA++RA+ KLIILG
Sbjct: 1487 DKFQGRDKEVVIVSCVRSNENGVVGDLLKDRRRINVALTRARSKLIILG 1535
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 11/97 (11%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLD------KDIE-----INTVDQYQGRDKSIIL 50
S+ T IGVI++Y+ QV L++ L+ KDI+ +NTVD +QG++K II+
Sbjct: 907 SIKEQFKTQTIGVISSYKAQVKLIQTLIKQSNTRLKDIDNKILSVNTVDSFQGQEKDIII 966
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+S +S+ K LND +R+ VA++RAK L ++G+
Sbjct: 967 FSCVRSSECKGIGFLNDGRRINVALTRAKFALFVIGN 1003
>gi|68069351|ref|XP_676587.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496351|emb|CAH95353.1| conserved hypothetical protein [Plasmodium berghei]
Length = 523
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKS 47
M I I + I +I Y Q+++L+ +L K IEI+TVD +QGR+K
Sbjct: 383 MIKIDKIDANDICIITPYSKQMNILRSMLHDNFFNNKNYINEYKKIEISTVDSFQGREKE 442
Query: 48 IILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+++S C++ K L D +RL VAI+RAK ++I+G+ I
Sbjct: 443 IVIFSLVCSNYFKNIGFLKDYRRLNVAITRAKRHIVIVGNSNTI 486
>gi|429859518|gb|ELA34298.1| DNA replication helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 1575
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD--IEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR+Q+SLLK L +E++T D++QGRDK +++ S ++ S
Sbjct: 1372 LTVGVPDGEIGVMTHYRSQLSLLKHGLRAHVGVEMHTADRFQGRDKDVVILSLVRSNDSC 1431
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1432 SIGDLLKDWRRINVAFTRAKTKLLVVG 1458
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 801 LKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILS 860
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 861 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 899
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 798 LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 857
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 858 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 896
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 795 LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 854
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 855 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 893
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 789 LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 848
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 849 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 887
>gi|328849166|gb|EGF98352.1| hypothetical protein MELLADRAFT_113623 [Melampsora larici-populina
98AG31]
Length = 1172
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
G+P IGVI YR Q+ LL LL+ +EI T D+ QGRDKS I+ + ++
Sbjct: 987 GVPASEIGVITPYRQQIKLLNYLLEHAPSVEIITADKSQGRDKSCIIMTMVRNNEHGSVG 1046
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L D +R+ V ++R++ KLIILG + +
Sbjct: 1047 ELLKDWRRINVCLTRSREKLIILGSFKTL 1075
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 801 LKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILS 860
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 861 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 899
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 790 LKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILS 849
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 850 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 888
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 798 LKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILS 857
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 858 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 896
>gi|302663024|ref|XP_003023160.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
gi|291187142|gb|EFE42542.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
Length = 1596
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI + IGV+ YR+Q+SLLK+ L +E++T D++QGRDK II+ S ++ +
Sbjct: 1385 GIAAEDIGVVTLYRSQLSLLKQKLRHHGSALEMHTADRFQGRDKEIIIMSCVRSNSDRNV 1444
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1445 GDLLRDWRRVNVAFTRARTKMLIVG 1469
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 787 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 846
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 847 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 885
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 771 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 830
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 831 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 869
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica
Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV+ LK + +KD +EI+TVD +QGR+K I+ S ++
Sbjct: 533 SGVRASDIGIITPYAAQVTCLKMMRNKDTKLKDLEISTVDGFQGREKEAIIISMVRSNSK 592
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D++ +
Sbjct: 593 KEVGFLSDHRRMNVAVTRARRQCCLVCDVETV 624
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +G+ IGV+ Y Q + ++++L + IEI +VD +QGR+K I+ S
Sbjct: 772 LRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLS 831
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGR 102
+++ LND +RL VA++RA++ L+I G+ QV+ + GR
Sbjct: 832 CVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVLARATTVGHQGR 881
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 795 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 854
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 855 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 893
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 795 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 854
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 855 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 893
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 825 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 884
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 885 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 923
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 819 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 878
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 879 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 917
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 819 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 878
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 879 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 917
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 819 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 878
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 879 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 917
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 819 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 878
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 879 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 917
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 819 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 878
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 879 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 917
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 808 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 867
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 868 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 906
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 796 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 855
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 856 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 894
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 825 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 884
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 885 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 923
>gi|118489512|gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 111 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 170
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 171 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 209
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 786 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 845
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 846 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 884
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 669 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 728
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 729 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 767
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
+ IGVI Y++ +K+L++ + IEI +VD +QGR+K II+ S ++ + L
Sbjct: 534 EFIGVITPYKDHEEYIKKLMENEKIEGIEIKSVDGFQGREKEIIIVSLVRANEKENIGFL 593
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+D +RL VAI+R K KLII+GD + +
Sbjct: 594 DDIRRLNVAITRPKRKLIIVGDAKTL 619
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYS 52
+LIS G+ IGVI Y Q + + L K +IE+ +VD +QGR+K IL S
Sbjct: 1128 TLISCGLKPTQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLS 1187
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 1188 CVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 1226
>gi|451999342|gb|EMD91805.1| hypothetical protein COCHEDRAFT_1194543 [Cochliobolus heterostrophus
C5]
Length = 1663
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 23/109 (21%)
Query: 1 MSLIS-GIPTDHIGVIATYRNQVSLLKRLLDK---------------------DIEINTV 38
+SL+S G+ D IG+IA YR+Q++LL++ L +E++T
Sbjct: 1421 VSLLSLGVVVDEIGIIAFYRSQLALLRQGLAAAYTQTQSSELSAPAISRQGCAGVELHTA 1480
Query: 39 DQYQGRDKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILG 86
D++QGRDK +++ S ++++ +L DR+R+ VA++RA+ KLIILG
Sbjct: 1481 DKFQGRDKEVVIVSCVRSNENGVVGDLLKDRRRINVALTRARSKLIILG 1529
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 766 LKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 825
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 826 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 864
>gi|402838777|ref|ZP_10887280.1| type III restriction enzyme, res subunit [Eubacteriaceae bacterium
OBRC8]
gi|402272337|gb|EJU21558.1| type III restriction enzyme, res subunit [Eubacteriaceae bacterium
OBRC8]
Length = 1080
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 12 IGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
+GVI YR Q S +K ++ + +E++TVD +QG K II+YS+ +SKS L
Sbjct: 963 VGVITAYRGQKSAIKEMIKQQKFKYIQVEVDTVDAFQGGQKEIIIYSTVRSSKSNRIGFL 1022
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
RL V++SRA+ LII+GDL +
Sbjct: 1023 KSEARLNVSLSRAQSLLIIVGDLNFL 1048
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 767 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMS 826
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 827 CVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 865
>gi|284166179|ref|YP_003404458.1| DNA replication factor Dna2 [Haloterrigena turkmenica DSM 5511]
gi|284015834|gb|ADB61785.1| DNA replication factor Dna2 [Haloterrigena turkmenica DSM 5511]
Length = 902
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + + ++ ++TVD++QG + +I+ S T T + E I
Sbjct: 802 AGLERSDIGVIAPFRAQVSEISKHVPDEVAVDTVDRFQGSSQEVIIVSFTATG-TLEGPI 860
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 861 FEDYRRINVALTRPKRALVLVGD 883
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IG++ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 137 SGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 196
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 197 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 233
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L KDIE+ +VD +QGR+K I+ S
Sbjct: 762 AGVSPSQIGIITPYEGQRSYIVSSMQTNGSHKKELYKDIEVASVDAFQGREKDYIVLSCV 821
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 822 RSNDHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 858
>gi|319789787|ref|YP_004151420.1| DNA helicase [Thermovibrio ammonificans HB-1]
gi|317114289|gb|ADU96779.1| DNA helicase [Thermovibrio ammonificans HB-1]
Length = 720
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+ IG+I Y QV L+K+LL + +E+N+VD +QGR+K I+ S ++ E
Sbjct: 610 GLDRREIGIITPYAAQVKLIKQLLAEREFKVEVNSVDGFQGREKEAIIVSFVRSNDEGEI 669
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VAI+R + KL+ +G+ + +
Sbjct: 670 GFLKDLRRLNVAITRPRRKLVAIGNTKTL 698
>gi|296426050|ref|XP_002842549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638821|emb|CAZ80284.1| unnamed protein product [Tuber melanosporum]
Length = 1003
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+ IGVI+ YR+Q+ +L+ LL +E++T D++QGRDK II+ S ++ +
Sbjct: 829 LSCGVDPSSIGVISVYRSQIKILQNLLRNRPSVEMHTADKFQGRDKEIIVISLVRSNGDQ 888
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RA+ KL+ILG
Sbjct: 889 NVGELLRDWRRINVAFTRARSKLLILG 915
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ + IG++ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 137 SGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 196
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 197 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 233
>gi|336372693|gb|EGO01032.1| hypothetical protein SERLA73DRAFT_105557 [Serpula lacrymans var.
lacrymans S7.3]
Length = 743
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI I +I Y+ QV+LL LL D+EI TVD QGR+K ++ S +++ +
Sbjct: 627 AGILPSQIAIITPYQAQVTLLTSLLRPTYGSDLEIGTVDGMQGREKEAVIISLVRSNEKR 686
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVII 92
E L +++RL VA++RA+ L ++GD ++
Sbjct: 687 EVGFLKEKRRLNVAMTRARRHLCVVGDSSTVV 718
>gi|197124729|ref|YP_002136680.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
gi|196174578|gb|ACG75551.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
Length = 622
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIE----INTVDQYQGRDKSIILYSSTCTSK 58
L +G+ + VI+ Y QV L++LL +++E ++TVD +QGR+K ++ S +++
Sbjct: 505 LAAGLAPGDVAVISPYDAQVQRLRQLLAEEVEAGLEVDTVDGFQGREKEAVVVSLVRSNE 564
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGD 87
+ E L D +R+ VA++RA+ KL+++GD
Sbjct: 565 AGEVGFLADVRRMNVALTRARAKLVVVGD 593
>gi|328851436|gb|EGG00591.1| hypothetical protein MELLADRAFT_118002 [Melampsora larici-populina
98AG31]
Length = 1001
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 16/96 (16%)
Query: 12 IGVIATYRNQVSLLKRLLDK----------------DIEINTVDQYQGRDKSIILYSSTC 55
IG+IA YR QVSLL+ L + ++EINTVD +QGR+K +I+ S
Sbjct: 864 IGIIAPYRGQVSLLQSLQRQPQKASLIRNSEQSYRNEVEINTVDGFQGREKPVIILSCVR 923
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ ++ L D +R VA +RAK K I++G L +
Sbjct: 924 GNFERQIGFLADLRRFNVAATRAKQKFIVVGHLDTL 959
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 10 DHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
++I VI Y++QV LL + + +IEI+TVD +QGR+K ++++S+ ++ L D
Sbjct: 645 NNIAVITPYKDQVDLLNQHNNLTEIEIDTVDAFQGREKEMVVFSAVRSNDDANIGFLRDL 704
Query: 69 KRLTVAISRAKHKLIILGDLQVI 91
+RL VA++RAK K+I +GD I
Sbjct: 705 RRLNVALTRAKRKIIFIGDSSTI 727
>gi|433638976|ref|YP_007284736.1| DNA/RNA helicase, superfamily I [Halovivax ruber XH-70]
gi|433290780|gb|AGB16603.1| DNA/RNA helicase, superfamily I [Halovivax ruber XH-70]
Length = 920
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QVS ++R + D+ ++TVD++QG + +I+ S S + I
Sbjct: 820 AGLDRDDIGVIAPFRAQVSEIERRVPADVTVDTVDRFQGSSQEVIVVSFV-ASGDLDGPI 878
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
D +R+ V ++R K L+++GD + +
Sbjct: 879 FEDYRRINVGLTRPKRALVLVGDAEAL 905
>gi|444316956|ref|XP_004179135.1| hypothetical protein TBLA_0B08000 [Tetrapisispora blattae CBS 6284]
gi|387512175|emb|CCH59616.1| hypothetical protein TBLA_0B08000 [Tetrapisispora blattae CBS 6284]
Length = 1697
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKES-KI 64
D IG++A YR Q+ LK+ D + +EI TVDQ+QGRDK +++ S +++ + ++
Sbjct: 1449 DDIGIMALYRGQLGKLKKRFDDEKYHGLEILTVDQFQGRDKDLVVISMVRSNERLQGGQL 1508
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIAIV 95
L + +R+ VA+SRAK KLII+G I ++V
Sbjct: 1509 LKELRRVNVAMSRAKCKLIIIGSKSTIGSVV 1539
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 784 LKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMS 843
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 844 CVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 882
>gi|224132094|ref|XP_002321254.1| predicted protein [Populus trichocarpa]
gi|222862027|gb|EEE99569.1| predicted protein [Populus trichocarpa]
Length = 1152
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYSSTCTSKSKE--- 61
GI D IG+I Y +Q +L++ ++ +EI+T+D+YQGRDK IL S +S++
Sbjct: 1036 GIVGDDIGIITPYNSQANLIRASVNVTSVEIHTIDKYQGRDKECILVSFARSSENPRNCT 1095
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S +L D R+ VA++RAK KLI++G + +
Sbjct: 1096 SSLLGDWHRINVALTRAKKKLILVGSCKTL 1125
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 768 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 827
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 828 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 866
>gi|358400527|gb|EHK49853.1| hypothetical protein TRIATDRAFT_234113 [Trichoderma atroviride IMI
206040]
Length = 1459
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR Q+ LLK L IE++T D++QGRDK +I+ S ++++
Sbjct: 1261 LTVGVPATEIGVMTHYRAQLHLLKDKLKYFPGIEMHTTDRFQGRDKEVIVLSLVRSNEAC 1320
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ VA +RAK KL+++G + +
Sbjct: 1321 NIGDLLKDWRRINVAFTRAKTKLLVVGSMSTL 1352
>gi|403413195|emb|CCL99895.1| predicted protein [Fibroporia radiculosa]
Length = 1216
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSST-CTS 57
SLI SG+ D IGV++ YR Q+ LL L K++E+ T D+ QGRDK IL S +
Sbjct: 1037 SLIRSGVRQDQIGVLSLYRQQIKLLSYYLQDRKEVEVLTADRSQGRDKDCILISMVRSNA 1096
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILG 86
+ + ++ D +R+ V+ +RA+ KLII G
Sbjct: 1097 EGQVGDLVKDWRRMNVSFTRARSKLIIFG 1125
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 5 SGIPTDHIGVIATYRNQVSLLK--------RLLDKDIEINTVDQYQGRDKSIILYSSTCT 56
+ P+ +GVI Y+ QV L+K L+D +I+INTVD +QG+++ +IL+S +
Sbjct: 870 NAYPSQSLGVICAYKAQVRLIKLEIKRQLGDLMD-EIQINTVDSFQGQERDVILFSCVRS 928
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGD 87
S S L D +R+ VA++RAK+ L I G+
Sbjct: 929 SSSGNIGFLQDGRRVNVALTRAKNALFIFGN 959
>gi|312376914|gb|EFR23870.1| hypothetical protein AND_11944 [Anopheles darlingi]
Length = 715
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 44/135 (32%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKR----LLDK--------------------------- 31
L +G+ + IG++A +R QV L++ LL K
Sbjct: 541 LRAGVDSKSIGIMAPFRAQVDLIRHHMQGLLQKHKSTRLPLSGAVQSPIKPDKSMEAHSL 600
Query: 32 ---DIEINTVDQYQGRDKSIILYSSTCTSKSKE----------SKILNDRKRLTVAISRA 78
DIEINTVDQ+QG+DK +S + E ++IL D++RLTVAI+RA
Sbjct: 601 DECDIEINTVDQFQGKDKKTATMASDSVKQEAEDIVQPSAMNSNEILFDKRRLTVAITRA 660
Query: 79 KHKLIILGDLQVIIA 93
+ KLI+LGD Q + A
Sbjct: 661 QVKLIVLGDRQCLDA 675
>gi|296807923|ref|XP_002844300.1| Dna2p [Arthroderma otae CBS 113480]
gi|238843783|gb|EEQ33445.1| Dna2p [Arthroderma otae CBS 113480]
Length = 1604
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI IGV+ YR+Q+SLLK+ L ++E++T D++QGRDK +I+ S ++ +
Sbjct: 1394 GIAAQDIGVVTLYRSQLSLLKQKLRHHGPNLEMHTADRFQGRDKEVIIMSCVRSNSDRNV 1453
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1454 GDLLRDWRRVNVAFTRARTKMLIVG 1478
>gi|281421454|ref|ZP_06252453.1| DNA helicase [Prevotella copri DSM 18205]
gi|281404526|gb|EFB35206.1| DNA helicase [Prevotella copri DSM 18205]
Length = 688
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV LK+L+ K I +NTVD +QG+++ +IL S ++ +
Sbjct: 580 VGIISPYRAQVQYLKKLIKKYEFFKPYRRLISVNTVDGFQGQERDVILISLVRSNDEGQI 639
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VA++RA+ KLIILG+
Sbjct: 640 GFLKDLRRMNVAMTRARMKLIILGN 664
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ ++ IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 755 GVKSEQIGVITPYEGQRAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 814
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 815 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 850
>gi|330995988|ref|ZP_08319882.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
gi|329573985|gb|EGG55563.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
Length = 659
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV LL+ LL +D + +NTVD +QG+++ +IL S ++++ +
Sbjct: 553 GLISPYKGQVQLLRTLLRRDAFFKPYRHLLSVNTVDGFQGQERDVILISLVRSNENGQIG 612
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VAI+RA+ KLI++G+
Sbjct: 613 FLHDLRRMNVAITRARMKLILVGN 636
>gi|123448689|ref|XP_001313071.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121894941|gb|EAY00142.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 814
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----------KDIEINTVDQYQGRDKSIILYSS 53
SG+P + IG+I Y Q L LD K++EI TVD +QGR+K I+++
Sbjct: 666 SGVPANSIGIITPYNGQNDYLMDNLDYICESCSAEYIKNVEIATVDGFQGREKDFIIFNL 725
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
++++ + L+D +RL V+I+RAK+ LI++G
Sbjct: 726 VRSNENYQIGFLSDIERLNVSITRAKYGLIVIG 758
>gi|389748586|gb|EIM89763.1| hypothetical protein STEHIDRAFT_118879 [Stereum hirsutum FP-91666
SS1]
Length = 388
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGV+ Y Q S LK+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 69 SGVVPGQIGVVTPYEGQRSYIVNYMQYNGSLKKDLYKEIEVASVDAFQGREKDYIILSCV 128
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++ILG+ +V+
Sbjct: 129 RSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL 165
>gi|301101790|ref|XP_002899983.1| DNA2-like helicase [Phytophthora infestans T30-4]
gi|262102558|gb|EEY60610.1| DNA2-like helicase [Phytophthora infestans T30-4]
Length = 1500
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--------------DIEINTVDQYQGRDKSI 48
++ + D I VI+ +R+QV+L+ + L IE++T+D+YQG+DK +
Sbjct: 1285 VLGSVSPDEIAVISPFRSQVALIHQHLTAIGALRRAGGSDWIHSIEVSTIDKYQGKDKGV 1344
Query: 49 ILYSST-CTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
IL S C + ++L D +R+ VA++RAK KLI++G
Sbjct: 1345 ILVSFVRCNEEKHVGELLTDWRRINVALTRAKQKLILVG 1383
>gi|449433149|ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Cucumis sativus]
gi|449518346|ref|XP_004166203.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Cucumis sativus]
Length = 1379
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-KDIEINTVDQYQGRDKSIILYS---STCTSKSKE 61
GI +G+I Y +Q S+++ ++ +E++T+D+YQGRDK IL S S+ KS
Sbjct: 1252 GIKGSEVGIITPYNSQASIIRLAINIASVEVHTIDKYQGRDKDCILVSFVRSSENPKSCT 1311
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+ +L D R+ VAI+RAK KLI++G
Sbjct: 1312 TSLLGDWHRINVAITRAKKKLIMVG 1336
>gi|448737514|ref|ZP_21719554.1| DNA replication factor Dna2 [Halococcus thailandensis JCM 13552]
gi|445803658|gb|EMA53941.1| DNA replication factor Dna2 [Halococcus thailandensis JCM 13552]
Length = 922
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+P + IGVIA +R Q + ++R + + ++TVD++QG K +++ S T +S I
Sbjct: 824 AGVPREEIGVIAPFRAQAAAIRREIPA-VTVDTVDRFQGSAKEVVIVSFVATG-DLDSPI 881
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 882 FEDHRRVNVALTRAKKALVLVGD 904
>gi|300121775|emb|CBK22349.2| unnamed protein product [Blastocystis hominis]
Length = 699
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 12 IGVIATYRNQV-SLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKR 70
IGVI+ Y Q SL +R+ D+ ++I+TVD +QG +K +I+ S T +S+ +D KR
Sbjct: 599 IGVISLYAAQCWSLQRRIADQRVQISTVDAFQGNEKDLIILS---TVRSQSIGFSSDPKR 655
Query: 71 LTVAISRAKHKLIILGDLQVI 91
L VAI+RAK +LII+G+ +++
Sbjct: 656 LNVAITRAKGQLIIIGNQRLL 676
>gi|170030086|ref|XP_001842921.1| potentail helicase MOV-10 [Culex quinquefasciatus]
gi|167865927|gb|EDS29310.1| potentail helicase MOV-10 [Culex quinquefasciatus]
Length = 674
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
I + IG+I+ Y QV LK LL DIEI + +QYQGR+K+I++ ST S
Sbjct: 563 ITQNSIGIISPYACQVRYLKELLKSRGRDDIEIGSTEQYQGREKAIMII-STVRSGGSGV 621
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LN+ KRL V+++RA+ +I++GD
Sbjct: 622 GFLNNVKRLNVSVTRAQALMIVVGD 646
>gi|448317312|ref|ZP_21506868.1| DNA replication factor Dna2 [Natronococcus jeotgali DSM 18795]
gi|445603832|gb|ELY57785.1| DNA replication factor Dna2 [Natronococcus jeotgali DSM 18795]
Length = 920
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS L + ++ ++TVD++QG + +I+ S T T + E I
Sbjct: 820 AGVDRADIGVIAPFRAQVSELSSRVPPEVAVDTVDRFQGSSEEVIVVSFTATG-TLEGPI 878
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIA 93
D +R+ VA++R K L+++GD + + A
Sbjct: 879 FEDYRRINVALTRPKRALVLVGDSRALSA 907
>gi|336379199|gb|EGO20355.1| hypothetical protein SERLADRAFT_477852 [Serpula lacrymans var.
lacrymans S7.9]
Length = 376
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 21/118 (17%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IG+IA Y Q+SLL RLL+ +IEI TVD ++GR+K +I+
Sbjct: 204 IGIIAPYAAQISLLTRLLNTNAKYHTRFKNALGDHRVMQLSNIEIKTVDGFEGREKEVII 263
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQ 108
+S+ + S L DR+RL V ++RAK L ++G + + A + G G GQ
Sbjct: 264 FSTVRNNTSGYIGFLADRRRLNVGLTRAKRGLFVVGSISTLKAGKLSKSNGNTGVEGQ 321
>gi|340521489|gb|EGR51723.1| Hypothetical protein TRIREDRAFT_55637 [Trichoderma reesei QM6a]
Length = 1734
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 12 IGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
I V+ Y Q +LKRLL +IEI+++D +QGR+ I+++ + ++S+E L D +
Sbjct: 1624 IAVLTPYSRQSEVLKRLLSGIPNIEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLR 1683
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK+ +II+G+
Sbjct: 1684 RMNVALTRAKYGMIIVGN 1701
>gi|257051542|ref|YP_003129375.1| DNA replication factor Dna2 [Halorhabdus utahensis DSM 12940]
gi|256690305|gb|ACV10642.1| DNA replication factor Dna2 [Halorhabdus utahensis DSM 12940]
Length = 902
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ +GVIA YR QV+ + + + + ++TVD++QG K ++L S T S +
Sbjct: 801 LDAGVDPGDVGVIAPYRAQVAEIGQRVPDGVTVDTVDRFQGSSKEVVLVSFVATG-SLDG 859
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
I D +R+ VA++RAK L+++GD
Sbjct: 860 PIFEDYRRINVALTRAKRALVLIGD 884
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSST 54
L G+ IGVI Y Q + + L K DIE+ +VD +QGR+K IL S
Sbjct: 1099 LQCGLKPSQIGVITPYEGQRAYITSLFQKNISFQNSSDIEVASVDAFQGREKDFILLSCV 1158
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 1159 RSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 1195
>gi|448313636|ref|ZP_21503349.1| DNA replication factor Dna2 [Natronolimnobius innermongolicus JCM
12255]
gi|445597569|gb|ELY51643.1| DNA replication factor Dna2 [Natronolimnobius innermongolicus JCM
12255]
Length = 924
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IG+IA +R QVS + + D+ ++TVD++QG + +I+ S T T + E I
Sbjct: 824 AGLERSEIGIIAPFRAQVSEISTHVPDDVAVDTVDRFQGSSQELIVVSFTATG-TLEGPI 882
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 883 FEDYRRINVALTRPKRALVLVGD 905
>gi|326484576|gb|EGE08586.1| DNA replication ATP-dependent helicase dna2 [Trichophyton equinum CBS
127.97]
Length = 1596
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI IGV+ YR+Q+SLLK+ L +E++T D++QGRDK II+ S ++ +
Sbjct: 1385 GIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQGRDKEIIIMSCVRSNSDRNV 1444
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1445 GDLLRDWRRVNVAFTRARTKMLIVG 1469
>gi|326475655|gb|EGD99664.1| DNA replication helicase Dna2 [Trichophyton tonsurans CBS 112818]
Length = 1596
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI IGV+ YR+Q+SLLK+ L +E++T D++QGRDK II+ S ++ +
Sbjct: 1385 GIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQGRDKEIIIMSCVRSNSDRNV 1444
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1445 GDLLRDWRRVNVAFTRARTKMLIVG 1469
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 859
>gi|336385549|gb|EGO26696.1| hypothetical protein SERLADRAFT_447834 [Serpula lacrymans var.
lacrymans S7.9]
Length = 824
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI I +I Y+ QV+LL LL D+EI TVD QGR+K ++ S +++ +
Sbjct: 708 AGILPSQIAIITPYQAQVTLLTSLLRPTYGSDLEIGTVDGMQGREKEAVIISLVRSNEKR 767
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVII 92
E L +++RL VA++RA+ L ++GD ++
Sbjct: 768 EVGFLKEKRRLNVAMTRARRHLCVVGDSSTVV 799
>gi|220919450|ref|YP_002494754.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957304|gb|ACL67688.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 622
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIE----INTVDQYQGRDKSIILYSSTCTSK 58
L +G+ + VI+ Y QV L++LL ++E ++TVD +QGR+K ++ S +++
Sbjct: 505 LAAGLAPADVAVISPYDGQVQRLRQLLADEVEAGLEVDTVDGFQGREKEAVVVSLVRSNE 564
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGD 87
+ E L D +R+ VA++RA+ KL+++GD
Sbjct: 565 AGEVGFLADVRRMNVALTRARAKLVVVGD 593
>gi|327295602|ref|XP_003232496.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
gi|326465668|gb|EGD91121.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
Length = 1591
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE- 61
GI IGV+ YR+Q+SLLK+ L +E++T D++QGRDK II+ S ++ +
Sbjct: 1380 GIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQGRDKEIIIMSCVRSNSDRNV 1439
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RA+ K++I+G
Sbjct: 1440 GDLLRDWRRVNVAFTRARTKMLIVG 1464
>gi|326427922|gb|EGD73492.1| hypothetical protein PTSG_05196 [Salpingoeca sp. ATCC 50818]
Length = 1412
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTS-KS 59
G+P + +GVI YR Q+ ++ + + +E NTVD+YQGRDK+ I+ S ++ +
Sbjct: 1287 GLPAEDVGVIVPYRAQLRRVQTAVHHQHGLRGVECNTVDRYQGRDKACIIVSFVRSNPEG 1346
Query: 60 KESKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA++RAK KLI++G
Sbjct: 1347 HVGELLQDERRINVALTRAKAKLILIG 1373
>gi|393244587|gb|EJD52099.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 714
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+ I +I Y+ QV+LL LL D+EI +VD QGR+K ++ S ++ +E
Sbjct: 600 GVSPSQIAIITPYQAQVTLLSSLLRPSMPDLEIGSVDGMQGREKEAVVLSLVRSNDKREV 659
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D++RL VA++RA+ L ++GD I
Sbjct: 660 GFLKDKRRLNVAMTRARRHLCVVGDSSTI 688
>gi|353227286|emb|CCA77799.1| related to HCS1-DNA helicase A [Piriformospora indica DSM 11827]
Length = 752
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
GIP I +I Y+ QVSLL L +EI TVD QGR+K ++ S ++ +E
Sbjct: 639 GIPPQEIAIITPYQAQVSLLSAALTSIPGLEIGTVDGVQGREKDAVVISLVRSNDKREVG 698
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++RA+ +L I+GD I
Sbjct: 699 FLKEKRRLNVAMTRARKQLCIVGDSSTI 726
>gi|219117907|ref|XP_002179739.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408792|gb|EEC48725.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSL------LKRLLDKDIEINTVDQYQGRDKSIILYSST-C 55
L GI +GVI +R Q+ + L K +E++T+D+YQGRDK +++ S
Sbjct: 153 LSCGIEAQAVGVICPFRAQLRVMDECASLASWKSKGLEMSTIDRYQGRDKPVVVVSFVRS 212
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
K + ++L D +RL VAI+RAK KL+++G + A
Sbjct: 213 NEKGRVGRLLQDFRRLNVAITRAKCKLVMVGSFTTLYA 250
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 816 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 875
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ +++LG+ +V+
Sbjct: 876 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVL 914
>gi|358057175|dbj|GAA97082.1| hypothetical protein E5Q_03757 [Mixia osmundae IAM 14324]
Length = 733
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+P I VI+ Y QVSLL+ LL DI + ++D +QGR+ I+ S ++ +E
Sbjct: 621 AGLPPKCIAVISPYNAQVSLLRSLLVHLPDISVGSIDSWQGREAECIIISLVRSNDQREV 680
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L + +RL VA++RAK +L ++GD
Sbjct: 681 GFLKESRRLNVAMTRAKRQLCVVGD 705
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 431 LKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 490
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 491 CVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 529
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 11/87 (12%)
Query: 12 IGVIATYRNQVSLLKRLLDKD-----------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
IG+I Y QV L+R++ + IE+++VD +QGR+K +I++S+ ++K
Sbjct: 797 IGIITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVSSVDGFQGREKEVIVFSAVRSNKHS 856
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
+ L+DR+RL VA++RAK L ++G+
Sbjct: 857 QLGFLSDRRRLNVALTRAKAALFVVGN 883
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVL 859
>gi|325268516|ref|ZP_08135146.1| helicase [Prevotella multiformis DSM 16608]
gi|324989044|gb|EGC20997.1| helicase [Prevotella multiformis DSM 16608]
Length = 654
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+I+ YR QV L+ L+ K + +NTVD +QG+++ +IL S +++ +
Sbjct: 549 VGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQI 608
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VAI+RA+ KLIILG+ + +
Sbjct: 609 GFLRDLRRMNVAITRARMKLIILGNARTM 637
>gi|302680494|ref|XP_003029929.1| hypothetical protein SCHCODRAFT_58687 [Schizophyllum commune H4-8]
gi|300103619|gb|EFI95026.1| hypothetical protein SCHCODRAFT_58687, partial [Schizophyllum
commune H4-8]
Length = 804
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 21/103 (20%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRDKSIIL 50
IGVIA Y Q+SLL RLL K+ IEI TVD ++GR+K +I+
Sbjct: 601 IGVIAPYVAQISLLDRLLKKNNDWKQRFTAVLGSHRALQLSNIEIKTVDGFEGREKDVII 660
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+S+ + S L D +RL V ++RAK L ++G ++ + A
Sbjct: 661 FSTVRNNSSGYIGFLADERRLNVGLTRAKRGLFVVGGIETLKA 703
>gi|367016357|ref|XP_003682677.1| hypothetical protein TDEL_0G00990 [Torulaspora delbrueckii]
gi|359750340|emb|CCE93466.1| hypothetical protein TDEL_0G00990 [Torulaspora delbrueckii]
Length = 1456
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTS- 57
L G+ ++GV+ YR Q+ LLK L +D+EI T DQ+QGRDK I+ S ++
Sbjct: 1286 LECGVEAKNVGVMTLYRAQLRLLKEKLQDERHEDLEILTADQFQGRDKDCIVISLVRSNL 1345
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+ K +L + +R+ VA++RAK KLI++G + I ++
Sbjct: 1346 EQKSGSLLKELRRVNVAMTRAKSKLILIGSRKTISSV 1382
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +G+ IGV+ Y Q + ++++L + IEI +VD +QGR+K I+ S
Sbjct: 328 LRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLS 387
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGR 102
+++ LND +RL VA++RA++ L+I G+ QV+ + GR
Sbjct: 388 CVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVLARATTVGHQGR 437
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L S + + IGVI Y Q + L + + +DIE+ +VD +QGR+K +I+ S
Sbjct: 755 LKSSVKPEQIGVITPYEGQRAFLVQYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMS 814
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ +II+G+ +V+
Sbjct: 815 CVRSNEHQGIGFLNDPRRLNVALTRARYGIIIVGNPKVL 853
>gi|224090282|ref|XP_002308965.1| predicted protein [Populus trichocarpa]
gi|222854941|gb|EEE92488.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD-----KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LL+ L + KD+EI+TVD +QGR+K I+ S ++
Sbjct: 528 SGVQASDIGIITPYAAQVVLLRILKNNDDKLKDMEISTVDGFQGREKEAIIISMVRSNSK 587
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L+D +R+ VA++RA+ + ++ D + +
Sbjct: 588 KEVGFLSDHRRMNVAVTRARRQCCLVCDTETV 619
>gi|123432036|ref|XP_001308340.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890015|gb|EAX95410.1| hypothetical protein TVAG_461840 [Trichomonas vaginalis G3]
Length = 243
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 28/109 (25%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQY 41
+++GI T+ IGVI YR QV +++ L IE++TVD+Y
Sbjct: 83 ILAGISTESIGVITPYRAQVIFIRKALQAQISCCSKYFPHMAGNPSEIASSIEVDTVDKY 142
Query: 42 QGRDKSIILYSSTCTSKSKESKI----LNDRKRLTVAISRAKHKLIILG 86
QGRDK I+ S T KS E K +D +R+ VAI+RAK KLI +G
Sbjct: 143 QGRDKECIIIS---TVKSNEKKSPGAHASDWQRMNVAITRAKTKLIFVG 188
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 7 IPTDHIGVIATYRNQVSLLKR-LLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
P D IG+I+ Y QVS LK L D +EI ++D +QGR+K +I+ S ++ ++ L
Sbjct: 555 FPED-IGIISPYDQQVSRLKSDLKDYHVEIKSIDGFQGREKEVIIISLVRSNLKEDIGFL 613
Query: 66 NDRKRLTVAISRAKHKLIILG 86
D +RL VA++RAK KLII+G
Sbjct: 614 RDYRRLNVALTRAKRKLIIIG 634
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ LLDK D+EI +VD +QGR+K I+ S
Sbjct: 743 GIQPEQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSC 802
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++R+K+ LIILG+
Sbjct: 803 VRANDSQSIGFLSDPRRLNVALTRSKYGLIILGN 836
>gi|448490622|ref|ZP_21608080.1| DNA replication factor Dna2 [Halorubrum californiensis DSM 19288]
gi|445693740|gb|ELZ45882.1| DNA replication factor Dna2 [Halorubrum californiensis DSM 19288]
Length = 905
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + I
Sbjct: 807 AGVEPDDIGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVIVVSLVATG-DLDGPI 863
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L ++GD
Sbjct: 864 FEDHRRMNVALTRAKKQLTLVGD 886
>gi|452989404|gb|EME89159.1| hypothetical protein MYCFIDRAFT_104185, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1503
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 1 MSLIS-GIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSST 54
++LI+ G+P IGVI YR+Q++L+++L + +EI++ D++QGRDK I+ S
Sbjct: 1374 LALIARGVPGSEIGVITLYRSQLALMRQLFRRANIPDSVEIDSADRFQGRDKECIIISMV 1433
Query: 55 CTSKSK-ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + +L D +R+ VA++R + KL++ G+ + +
Sbjct: 1434 RSNAVRIVGDLLKDWRRVNVALTRGRSKLVVFGNRETL 1471
>gi|304383829|ref|ZP_07366287.1| DNA helicase [Prevotella marshii DSM 16973]
gi|304335085|gb|EFM01357.1| DNA helicase [Prevotella marshii DSM 16973]
Length = 1174
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 18/103 (17%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
PT +G+I YRNQ+++++R +++ +I I+TV++YQG + +I+YS T T + +
Sbjct: 1039 PTRTVGIIVPYRNQIAMIRRGIERLGIESLNEITIDTVERYQGSQRDVIIYSFTVTHRYQ 1098
Query: 61 ----------ESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
E+ + DRK L VA++RA+ +LI+ G L V+ A
Sbjct: 1099 LDFLTGNCFVENGRIVDRK-LNVALTRARKQLILTGCLSVLSA 1140
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ + KD+E+ +VD +QGR+K I+ S
Sbjct: 760 AGVRPSEIGVITPYEGQRSYIVSTMQNSGTYKKEMYKDVEVASVDAFQGREKDFIVLSCV 819
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 820 RSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 856
>gi|406608166|emb|CCH40600.1| DNA replication ATP-dependent helicase Dna2 [Wickerhamomyces
ciferrii]
Length = 1465
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
++ G+ IG+++ YR Q+ L R KDIE+ T DQ+QGRDK ++ S ++
Sbjct: 1299 VLCGVEQSSIGIMSFYRAQLRLFYRKFSDYKDIEMLTADQFQGRDKDCVIISLVKSNHRN 1358
Query: 61 ES-KILNDRKRLTVAISRAKHKLIILG------DLQVIIAIVN 96
++ +L + +R+ VAI+RA+ KLII+G LQ I A +N
Sbjct: 1359 DAGSLLKEWRRVNVAITRARSKLIIIGSKRTLQSLQTIDAFMN 1401
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLL-----------KRLLDKDIEINTVDQYQGRDKSIILY 51
L GI IGVI Y+ Q + R + +D+E+ +VD +QGR+K I++
Sbjct: 711 LSEGIKPHQIGVITPYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIF 770
Query: 52 SSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S T ++ + L D +RL VAI+RAK+ L +LG+++ +
Sbjct: 771 SCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTL 810
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVL 859
>gi|170095291|ref|XP_001878866.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646170|gb|EDR10416.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 721
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
GI I +I Y+ QV+LL L D+EI TVD QGR+K +I+ S ++ ++E
Sbjct: 606 GIQPKQIAIITPYQAQVTLLTSTLRPTYGPDLEIGTVDGMQGREKEVIIISLVRSNDTRE 665
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L +++R+ VA++RAK L I+GD
Sbjct: 666 VGFLKEKRRMNVAMTRAKRHLCIVGD 691
>gi|340346996|ref|ZP_08670112.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433652214|ref|YP_007278593.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
gi|339610499|gb|EGQ15349.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433302747|gb|AGB28563.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
Length = 675
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ YR QV L++L+ + I +NTVD +QG+++ IIL S + +
Sbjct: 568 VGVISPYRAQVQYLRQLIKRREFFKPYRHLISVNTVDGFQGQERDIILVSMVRANDQGQI 627
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VAI+RA+ KLIILG+
Sbjct: 628 GFLCDLRRMNVAITRARMKLIILGN 652
>gi|409047226|gb|EKM56705.1| hypothetical protein PHACADRAFT_207896 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
G+ I +I Y+ QVSLL +L D+EI TVD QGR+K ++ S ++ +E
Sbjct: 677 GVLPSQIAIITPYQAQVSLLTSMLRPMYGPDLEIGTVDGMQGREKDAVIISLVRSNGKRE 736
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L D++RL VA++RAK L ++GD
Sbjct: 737 VGFLKDKRRLNVAMTRAKRYLCVVGD 762
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 768 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 827
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 828 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 863
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 757 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 816
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 817 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 852
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 768 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 827
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 828 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 863
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+ S
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVL 859
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 768 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 827
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 828 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 863
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 757 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 816
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 817 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 852
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 613 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 672
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 673 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 708
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 768 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 827
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 828 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 863
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 755 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 814
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 815 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 850
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 755 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 814
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 815 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 850
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 3 LISGIPTDHIGVIATYRNQVSLL-----------KRLLDKDIEINTVDQYQGRDKSIILY 51
L GI IGVI Y+ Q + R + +D+E+ +VD +QGR+K I++
Sbjct: 685 LSEGIKPHQIGVITPYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIF 744
Query: 52 SSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S T ++ + L D +RL VAI+RAK+ L +LG+++ +
Sbjct: 745 SCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTL 784
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 769 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 828
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 829 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 864
>gi|441501354|ref|ZP_20983473.1| putative helicase [Fulvivirga imtechensis AK7]
gi|441434890|gb|ELR68315.1| putative helicase [Fulvivirga imtechensis AK7]
Length = 641
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ IG+IA Y+ QVSLL+ L+ + + +NTVD +QG+++ II + +++
Sbjct: 524 ESIGIIAPYKAQVSLLQDLVQQSNFDEQLVNKLTVNTVDSFQGQERDIIYITLVRSNEKG 583
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L + +R+ VAI+RA+ KL+I+GD I
Sbjct: 584 EIGFLANTRRMNVAITRARKKLVIIGDSATI 614
>gi|392590481|gb|EIW79810.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 775
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ I VI Y+ QV+LL LL + ++EI TVD QGR+K ++ S +++ +
Sbjct: 659 AGVLPSQIAVITPYQAQVTLLTSLLRETYGPELEIGTVDGMQGREKEAVVISLVRSNEKR 718
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L +++RL VA++RAK L ++GD
Sbjct: 719 EVGFLKEKRRLNVAMTRAKRHLCVVGD 745
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 769 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 828
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 829 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 864
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 12 IGVIATYRNQVSLLKRLLDKD-------------------IEINTVDQYQGRDKSIILYS 52
IGVIA Y Q+SLL+R+L ++ IE+ TVD ++GR+K +I++S
Sbjct: 763 IGVIAPYAAQISLLERVLGENRERWVDALGSERRADEVEAIEVKTVDGFEGREKEVIIFS 822
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ + + + L DR+RL V ++RAK L + G ++ +
Sbjct: 823 TVRNNGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTL 861
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 755 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 814
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 815 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 850
>gi|294893946|ref|XP_002774696.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880149|gb|EER06512.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q + ++R+L+ D I INTVD +QG ++ +IL+S+
Sbjct: 237 AGMEPGDIGIVVPYSGQKTQIERMLESDYRLPRESVGRISINTVDAFQGSERELILFSAV 296
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+++ + D KR+ V ++RAK L++ GD++ + A
Sbjct: 297 RSNRDGDIGFTGDPKRMNVMLTRAKRGLVVFGDVKTLSA 335
>gi|448414192|ref|ZP_21577331.1| DNA/RNA helicase, superfamily i [Halosarcina pallida JCM 14848]
gi|445682485|gb|ELZ34902.1| DNA/RNA helicase, superfamily i [Halosarcina pallida JCM 14848]
Length = 908
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D +GVIA +R QV+ + + D+ ++TVD++QG K ++L S T + + I
Sbjct: 810 AGVDPDDVGVIAPFRAQVAEISK--RTDVTVDTVDRFQGSSKEVVLVSFVATG-ALDGPI 866
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 867 FEDHRRVNVALTRAKKALVLVGD 889
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 756 GVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVR 815
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 816 SNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 851
>gi|304313994|ref|YP_003849141.1| DNA helicase [Methanothermobacter marburgensis str. Marburg]
gi|302587453|gb|ADL57828.1| predicted DNA helicase [Methanothermobacter marburgensis str.
Marburg]
Length = 654
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ + IG+I Y +QV L+ + +E+N+VD +QGR++ +I+ S ++ L
Sbjct: 539 GVKEEEIGIITPYDDQVDLISSM--TGVEVNSVDGFQGREREVIIISMVRSNSEGNIGFL 596
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +RL V+++RA+ KLII+GD
Sbjct: 597 RDLRRLNVSLTRARRKLIIIGD 618
>gi|452987618|gb|EME87373.1| hypothetical protein MYCFIDRAFT_26275 [Pseudocercospora fijiensis
CIRAD86]
Length = 694
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYSSTCTSKSKE 61
SG+ D I V+ Y Q++LL ++L + + E+ +VD +QGR+K ++ S ++ E
Sbjct: 573 SGVKADDIAVVTPYNGQLALLSQMLKEQVPGLELGSVDGFQGREKEAVIVSLVRSNAEHE 632
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L++++RL VA++R K +L ++GD + I
Sbjct: 633 VGFLSEKRRLNVAMTRPKRQLCVIGDSETI 662
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
IGVI+ Y+ QV LL+ ++ + I++NTVD +QG++K +IL+S ++K L
Sbjct: 1680 IGVISPYKQQVVLLRDMILRKFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFL 1739
Query: 66 NDRKRLTVAISRAKHKLIILG 86
D +RL VA++RAK L+I+G
Sbjct: 1740 ADVRRLNVALTRAKSTLLIVG 1760
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
IGVI+ Y+ QV LL+ ++ + I++NTVD +QG++K +IL+S ++K L
Sbjct: 1680 IGVISPYKQQVVLLRDMILRKFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFL 1739
Query: 66 NDRKRLTVAISRAKHKLIILG 86
D +RL VA++RAK L+I+G
Sbjct: 1740 ADVRRLNVALTRAKSTLLIVG 1760
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKDIE----INTVDQYQGRDKSIILYSSTCTSKSKESKI 64
TD G+I Y +Q L+ LL D + TVD +QGR+K IIL S+ ++
Sbjct: 648 TDSFGIITPYSSQAKLICNLLRPDFRKLPTVATVDSFQGREKEIILVSTVRSNLGGRVGF 707
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCP 98
LND +RL V+++RAK +II+G+ Q + + CP
Sbjct: 708 LNDWRRLNVSLTRAKRGMIIVGNKQTLES---CP 738
>gi|123432021|ref|XP_001308336.1| helicase [Trichomonas vaginalis G3]
gi|121890011|gb|EAX95406.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1050
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 28/109 (25%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQY 41
+++GI T+ IGVI YR QV +++ L IE++TVD+Y
Sbjct: 890 ILAGISTESIGVITPYRAQVIFIRKALQAQISCCSKYFPHMAGNPSEIASSIEVDTVDKY 949
Query: 42 QGRDKSIILYSSTCTSKSKESKI----LNDRKRLTVAISRAKHKLIILG 86
QGRDK I+ S T KS E K +D +R+ VAI+RAK KLI +G
Sbjct: 950 QGRDKECIIIS---TVKSNEKKSPGAHASDWQRMNVAITRAKTKLIFVG 995
>gi|70919662|ref|XP_733467.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56505292|emb|CAH80884.1| hypothetical protein PC000298.04.0 [Plasmodium chabaudi chabaudi]
Length = 163
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKSIILYSST 54
P D I VI Y Q+++L+ + K IEI+TVD +QGR+K I+++S
Sbjct: 31 PND-ICVITPYSKQMNILRNIFYDNIFNNKNYINEYKKIEISTVDSFQGREKEIVIFSLV 89
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
C++ K L D +RL VAI+RAK ++I+G+
Sbjct: 90 CSNYFKNIGFLKDYRRLNVAITRAKRHIVIVGN 122
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
G+ + VIA Y Q L+ L+ ++E++TVD +QGR+K IL S T ++ +
Sbjct: 534 GLAPREVAVIAPYSAQARHLREALEAVHPEVEVDTVDAFQGREKDAILVSMTRSNSEGQL 593
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VA++RA+ L ++GD
Sbjct: 594 GFLNDLRRMNVALTRARRHLFVVGD 618
>gi|82705676|ref|XP_727066.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482739|gb|EAA18631.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 583
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKS 47
M I I + I +I Y Q+++LK + K IEI+TVD +QGR+K
Sbjct: 443 MIQIDNICGNDICIITPYSKQMNILKNIFYDNFFNNKNYINEYKKIEISTVDSFQGREKE 502
Query: 48 IILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+++S C++ K L D +RL VAI+RAK ++I+G+ I
Sbjct: 503 IVIFSLVCSNYFKNIGFLKDYRRLNVAITRAKRHVVIVGNSNTI 546
>gi|296109905|ref|YP_003616854.1| DNA helicase [methanocaldococcus infernus ME]
gi|295434719|gb|ADG13890.1| DNA helicase [Methanocaldococcus infernus ME]
Length = 639
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
+ VI Y QV LL+R+ ++ D+E+NTVD +QGR+ I+ S ++K L D
Sbjct: 545 VSVITPYDAQVRLLRRMFEEEGLDVEVNTVDGFQGRENEAIVISFV---RTKNFGFLKDY 601
Query: 69 KRLTVAISRAKHKLIILGD 87
+RL VAI+RAK KLI++G+
Sbjct: 602 RRLNVAITRAKRKLILIGN 620
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL----LDKD----IEINTVDQYQGRDKSIILYSST 54
L S P GVI Y+ Q LL+R LDK I+INT+D +QGR+K +I++S
Sbjct: 678 LCSRFPHIESGVITPYKQQYFLLQRTFAAALDKATYSAIDINTIDGFQGREKDVIIFSCV 737
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGN 105
++K L+D +R+ VA++RAK L ++G A++N P+ G N
Sbjct: 738 RAHETKGIGFLSDIRRMNVALTRAKFGLFVVGK---STALLNNPHWGALVN 785
>gi|86160632|ref|YP_467417.1| superfamily I DNA/RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777143|gb|ABC83980.1| Superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 619
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
L +G+ + VI+ Y QV L++LL + +E++TVD +QGR+K ++ S +++
Sbjct: 502 LAAGLAPADVAVISPYDAQVQRLRQLLADELEAGLEVDTVDGFQGREKEAVVVSLVRSNE 561
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGD 87
+ E L D +R+ VA++RA+ KL+++GD
Sbjct: 562 AGEVGFLADVRRMNVALTRARAKLVVVGD 590
>gi|302829959|ref|XP_002946546.1| hypothetical protein VOLCADRAFT_79084 [Volvox carteri f.
nagariensis]
gi|300268292|gb|EFJ52473.1| hypothetical protein VOLCADRAFT_79084 [Volvox carteri f.
nagariensis]
Length = 832
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
I +IG+I Y QV+LLK L + +EI++VD +QGR+K I+ S ++ S E
Sbjct: 715 ISPHNIGIITPYNAQVALLKELRQEQAATALEISSVDGFQGREKEAIIISMVRSNDSGEV 774
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+DR+R+ VA++RA+ I+ D + +
Sbjct: 775 GFLSDRRRMNVAVTRARRHCAIVCDTETV 803
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----VSLLKRL------LDKDIEINTVDQYQGRDKSIILYS 52
L +G+ IGVI Y Q VS++ R L K+IE+++VD +QGR+K II+ S
Sbjct: 859 LQNGMSPSQIGVITPYEGQRAHVVSVMVRNGAVRQDLYKEIEVSSVDAFQGREKDIIVLS 918
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ L+D +RL VA++RA++ L++LG+ +V+
Sbjct: 919 CVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVL 957
>gi|255588743|ref|XP_002534704.1| DNA replication helicase dna2, putative [Ricinus communis]
gi|223524726|gb|EEF27678.1| DNA replication helicase dna2, putative [Ricinus communis]
Length = 320
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-DIEINTVDQYQGRDKSIILYSSTCTSKSK--- 60
SGI + IG+I Y +Q +L++ + +E++T+D+YQGRDK IL S +S++
Sbjct: 187 SGIQGEDIGIITPYNSQANLIRTAVGTISVEMHTIDKYQGRDKDCILVSFVRSSENPRNC 246
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+S +L D R+ VA++RAK K+I++G + + ++
Sbjct: 247 KSSLLGDWHRINVALTRAKKKMIMVGSCKTLSSV 280
>gi|358380541|gb|EHK18219.1| hypothetical protein TRIVIDRAFT_159356 [Trichoderma virens Gv29-8]
Length = 1453
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR Q+ LLK L +E++T D++QGRDK +I+ S ++++
Sbjct: 1258 LTVGVPATEIGVMTHYRAQLHLLKDKLKHFPGVEMHTTDRFQGRDKEVIVLSLVRSNEAC 1317
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ VA +RAK KL+++G + +
Sbjct: 1318 NIGDLLKDWRRINVAFTRAKTKLLVVGSMNTL 1349
>gi|389623269|ref|XP_003709288.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae
70-15]
gi|351648817|gb|EHA56676.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae
70-15]
gi|440466068|gb|ELQ35355.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae Y34]
gi|440484931|gb|ELQ64938.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae P131]
Length = 1689
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTS 57
G+P + IGV+ YR+Q++LLK L + +E++T D++QGRDK +++ S ++
Sbjct: 1473 GVPANEIGVMTHYRSQLALLKHKLLRGKNTGDATAVEMHTADRFQGRDKEVVVLSLVRSN 1532
Query: 58 KSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ +L D +R+ VA +RAK KL+++G + +
Sbjct: 1533 EACHIGDLLRDWRRINVAFTRAKTKLLVIGSRETL 1567
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 21/101 (20%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IG+IA Y Q++LL RLL D+E+ TVD ++GR+K +I+
Sbjct: 755 IGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIV 814
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ + S L DR+RL V ++RAK L ++G ++ I
Sbjct: 815 FSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVGGMRTI 855
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSSTCTS 57
G+ IGVI Y Q + + L K +IE+ +VD +QGR+K IL S ++
Sbjct: 1017 GLKPTQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSN 1076
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 1077 KKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 1110
>gi|444911444|ref|ZP_21231619.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718202|gb|ELW59018.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 640
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +GI + VI YR Q L+ L D+E++TVD +QGR+K IL S ++
Sbjct: 517 LAAGIAPRELAVITPYRAQAHALRERVEPLSPDVEVDTVDAFQGREKDAILVSLVRSNSE 576
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
+ L+D +R+ VA++RA+ L ++GD
Sbjct: 577 GQIGFLSDLRRMNVALTRARRHLFVVGD 604
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q S LK+ L KDIE+ +VD +QGR+K I+ S
Sbjct: 792 AGVLPSQIGIVTPYEGQRSYIVTYMQTNGTLKKDLYKDIEVASVDAFQGREKDYIILSCV 851
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK+ +++LG+ +V+
Sbjct: 852 RSNDHQGIGFLNDPRRLNVALTRAKYGVVVLGNPKVL 888
>gi|449681987|ref|XP_002164417.2| PREDICTED: DNA-binding protein SMUBP-2-like, partial [Hydra
magnipapillata]
Length = 611
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ IG+I Y QV LL++ +++ IEIN+VD +QGR+K IL S ++
Sbjct: 189 LFAGVNPKDIGIITPYNLQVELLRQSINQINSQIEINSVDGFQGREKEAILISMVRSNDG 248
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
E L++ +R+ VAI+RA+ L ++ D Q +
Sbjct: 249 GEVGFLSEDRRINVAITRARRHLFVVCDTQTV 280
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 10/89 (11%)
Query: 10 DHIGVIATYRNQVSLLKRLL---DKDIE----INTVDQYQGRDKSIILYSSTCTSKSKES 62
+ IG+I Y+ Q+ +K +L +DI +NTVD +QG++K +IL S T KSK
Sbjct: 1453 NKIGIITPYKAQMKKIKEVLLSIRQDIFDFVCVNTVDGFQGQEKDVILIS---TVKSKNM 1509
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +R+ V+I+RAKH LII+G+ +V+
Sbjct: 1510 GFLSDVRRINVSITRAKHSLIIIGNSKVL 1538
>gi|345570486|gb|EGX53307.1| hypothetical protein AOL_s00006g173 [Arthrobotrys oligospora ATCC
24927]
Length = 1712
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-- 61
G+ + IGV++ YR+Q+ ++ LL +E++T D++QGRDK I+ S S KE
Sbjct: 1507 GVDANEIGVVSVYRSQIKAIQHLLHGHPSVEMHTADKFQGRDKDCIIIS-LVRSNDKEVV 1565
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+I+G
Sbjct: 1566 GELLKDWRRINVAFTRAKTKLLIIG 1590
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 14/101 (13%)
Query: 3 LISGIPTDHIGVIATYRNQ----------VSLLKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ + IGV+ Y Q V +L L KDI++ +VD +QG++K I+
Sbjct: 744 LNSGVSPEDIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIM- 802
Query: 53 STCTSKSKESKI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
TC +++S I L+D +RL VAI+RA+ LII+G+ +V+
Sbjct: 803 -TCVRSNEKSGIGFLSDPRRLNVAITRARSGLIIIGNPKVL 842
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q S LK+ L KD+E+ +VD +QGR+K I+ S
Sbjct: 786 AGVKPSQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKDVEVASVDAFQGREKDYIILSCV 845
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RA+ L+ILG+ +V+
Sbjct: 846 RSNEHQGIGFLSDPRRLNVALTRARFGLVILGNPKVL 882
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 1058 LKSGVVPAQIGVITPYEGQRAYIVNNMARNGSLRQQLYKEIEVASVDSFQGREKDFIIVS 1117
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA+ ++ILG+ +V+
Sbjct: 1118 CVRSNEHQGIGFLNDPRRLNVALTRARFGIVILGNPKVL 1156
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 12 IGVIATYRNQVSLLK------RLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
IG+I+ Y+ Q+ ++ ++ K+I++ TVD +QG++K II+ S ++ +E L
Sbjct: 499 IGIISPYKLQIQYIREQLIEQKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFL 558
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +R+ VAI+RA+ KLI++GD
Sbjct: 559 KDLRRMNVAITRARKKLIVIGD 580
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 752 AGVHPQSIGVITPYEGQRSFIVSSMQTNGTFKKELYKEIEVASVDAFQGREKDFIILSCV 811
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 812 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 848
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSSTCTS 57
G+ IGVI Y Q + + L K +IE+ +VD +QGR+K IL S ++
Sbjct: 1108 GLKPSQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSN 1167
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
K LND +RL VA++RAK+ LII G+ +V+
Sbjct: 1168 KKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 1201
>gi|412987690|emb|CCO20525.1| predicted protein [Bathycoccus prasinos]
Length = 849
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 7 IPTDHIGVIATYRNQVSLLKRL---------LDKDIEINTVDQYQGRDKSIILYSSTCTS 57
I + IGVI Y QVSLL+ + L KDIEI+TVD +QGR+K I+ S+ ++
Sbjct: 729 ILPNEIGVITPYSGQVSLLREMRAARAEENALFKDIEISTVDGFQGREKEAIIISTVRSN 788
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ E L+D +R+ VA++RA+ + ++ + + +
Sbjct: 789 ENNEVGFLSDARRMNVAVTRARKHVTLICNCETV 822
>gi|327401287|ref|YP_004342126.1| AAA ATPase [Archaeoglobus veneficus SNP6]
gi|327316795|gb|AEA47411.1| AAA ATPase [Archaeoglobus veneficus SNP6]
Length = 544
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ + IG+I Y Q L+ ++++ +E+NTVD +QGR+K +I++S+T K
Sbjct: 430 NGVNVEDIGIITPYVRQRKLISEMINRIGLNTVEVNTVDAFQGREKDVIIFSTTAV---K 486
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
+ + +D +R VA++RA+ K I++G+
Sbjct: 487 DLRFASDFRRFNVALTRARKKFIVIGN 513
>gi|302811082|ref|XP_002987231.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
gi|300145128|gb|EFJ11807.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
Length = 820
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 11 HIGVIATYRNQVSLLK----RLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
H+ VI+ Y++QV+ L+ +L KD I+INTVD +QGR+K I ++S +KSK
Sbjct: 638 HVAVISPYKHQVTTLRTRFAEVLGKDAARLIDINTVDGFQGREKDIAIFSCVRANKSKGI 697
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++D +R+ V ++RA+ ++++G
Sbjct: 698 GFVSDFRRMNVGLTRARASMLVVG 721
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L SG+ + IG++ Y Q + L++ L + +E+ +VD +QGR+K I+ S
Sbjct: 680 LKSGVTPEQIGIVTPYEGQRAYIVQYMSFNGTLRQPLYEAVEVASVDAFQGREKDYIILS 739
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
T +++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 740 CTRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 778
>gi|448717221|ref|ZP_21702676.1| DNA replication factor Dna2 [Halobiforma nitratireducens JCM 10879]
gi|445786025|gb|EMA36801.1| DNA replication factor Dna2 [Halobiforma nitratireducens JCM 10879]
Length = 968
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QVS + + + + + ++TVD++QG + +I+ S T T + E I
Sbjct: 868 AGLERTEIGVIAPFRAQVSEISKRVPESVAVDTVDRFQGSSQEVIIVSFTATGR-LEGPI 926
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L ++GD
Sbjct: 927 FEDYRRINVALTRPKRALTLVGD 949
>gi|159111341|ref|XP_001705902.1| DNA helicase HCS1 [Giardia lamblia ATCC 50803]
gi|157433993|gb|EDO78228.1| DNA helicase HCS1 [Giardia lamblia ATCC 50803]
Length = 734
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
G P IG I+ Y QVSLL ++ K +E++TVD +QGR+K II+ S ++ +
Sbjct: 611 GTPQTVIGCISPYTAQVSLLAGRMEAHVTKGLEVSTVDGFQGREKEIIIISFVRSNDEGD 670
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L+D +RL V+I+RAK ++I+G+
Sbjct: 671 VGFLSDIRRLNVSITRAKRLVVIIGN 696
>gi|443927204|gb|ELU45719.1| RNA-directed RNA polymerase [Rhizoctonia solani AG-1 IA]
Length = 1713
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
P I +++ Y QV LLK +LDKD E++++D +QGR+ II++++ ++ S +
Sbjct: 1582 PALTIAILSPYSRQVKLLKGMLDKDSTLSKNTEVHSIDGFQGREAEIIIFTTVRSNPSGD 1641
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VA++RA+ II+G+
Sbjct: 1642 IGFLEDERRLNVALTRAQLGRIIIGN 1667
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----------DKDIEINTVDQYQGRDKSIILYSSTC 55
G+ D IGV+ Y Q + + + + K +E+ +VD +QGR+K I+ +
Sbjct: 736 GVAPDQIGVVTPYEGQRAYVTQYMVSSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVR 795
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+SK+ L+D +RL VA++RAK+ LIILG+ V+
Sbjct: 796 SSKTGGIGFLSDPRRLNVALTRAKYGLIILGNPHVL 831
>gi|302800219|ref|XP_002981867.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
gi|300150309|gb|EFJ16960.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
Length = 643
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG++ Y QV++L+R+ +++ +EI+T+D +QGR+K ++ S ++
Sbjct: 526 SGVKAIDIGIVTPYAAQVNVLRRMRNEEQRLLEVEISTIDGFQGREKEAMIISMVRSNDK 585
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
KE L+D++R+ VA++RAK + ++ D
Sbjct: 586 KEVGFLSDKRRMNVAVTRAKRQCCVICD 613
>gi|50293567|ref|XP_449195.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528508|emb|CAG62165.1| unnamed protein product [Candida glabrata]
Length = 695
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLD--KD------IEINTVDQYQGRDKSIILYSSTCT 56
S + D IG+I+ Y QVSLLK+L++ +D IEI++VD +QGR+K I+ S +
Sbjct: 570 SNVQQDCIGIISPYNAQVSLLKKLVNGTEDSPVYPLIEISSVDGFQGREKECIILSLVRS 629
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ E L +++RL VA++R K +L ++G+++ +
Sbjct: 630 NDKAEVGFLKEQRRLNVAMTRPKRQLCVIGNIETL 664
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 21/101 (20%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IG+IA Y Q++LL RLL D+E+ TVD ++GR+K +I+
Sbjct: 765 IGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIV 824
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ + S L DR+RL V ++RAK L ++G ++ I
Sbjct: 825 FSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVGGMRTI 865
>gi|325280121|ref|YP_004252663.1| helicase [Odoribacter splanchnicus DSM 20712]
gi|324311930|gb|ADY32483.1| putative helicase [Odoribacter splanchnicus DSM 20712]
Length = 627
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Query: 4 ISGIPTDHI--GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYS 52
I I +HI GVI+ YR QV L+ LL K+ I ++TVD +QG+++ +I+ S
Sbjct: 512 IRRILEEHIDFGVISPYRAQVHYLRHLLKKEPFFRPCRRLITVHTVDGFQGQERDVIMIS 571
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + L D +R+ VAI+RA+ KL+ILG+
Sbjct: 572 LVRANEKGQIGFLRDLRRMNVAITRARMKLLILGE 606
>gi|409078031|gb|EKM78395.1| hypothetical protein AGABI1DRAFT_101114 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 754
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI + I +I Y+ QV+LL L+ ++EI TVD QGR+K I+ S ++ ++
Sbjct: 638 AGINSSQIAIITPYQAQVTLLTSLIRPKYGSELEIGTVDGMQGREKEAIIISLVRSNDTR 697
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L +++RL VA++RA+ L I+GD
Sbjct: 698 EVGFLKEKRRLNVAMTRARRHLCIVGD 724
>gi|392572780|gb|EIW65924.1| hypothetical protein TREMEDRAFT_72495 [Tremella mesenterica DSM
1558]
Length = 734
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
+ SGI IG+I Y+ QVSLL +L D + I TVD QG+++ +I+ S ++ +
Sbjct: 616 IASGISPADIGIITPYQAQVSLLSSMLRDDFPEMTIGTVDGLQGQEREVIILSLVRSNST 675
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
E L + +RL VA++RAK +L ++GD
Sbjct: 676 GEVGFLGEYRRLNVAMTRAKRQLCVVGD 703
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ D IG+I Y Q + L + + ++IEI +VD +QGR+K +I+ S
Sbjct: 763 GVKPDQIGIITPYEGQRAYLVQYMQYQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVR 822
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ ++I+G+ +V+
Sbjct: 823 SNEHQGIGFLNDPRRLNVALTRAKYGILIVGNPKVL 858
>gi|428165968|gb|EKX34953.1| hypothetical protein GUITHDRAFT_80206, partial [Guillardia theta
CCMP2712]
Length = 228
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLK-RLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ + IGV+A Y QV++L+ RL +K +EI TVD +QGR+K +L S ++
Sbjct: 147 LAAGVQEESIGVLAPYNGQVAVLRDRLKEKYRGVEIGTVDGFQGREKDALLLSLVRSNTR 206
Query: 60 KESKILNDRKRLTVAISRAK 79
+E L+D +RL VAI+RAK
Sbjct: 207 REVGFLSDDRRLNVAITRAK 226
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 791 AGVKPSQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCV 850
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RA++ L+ILG+ +V+
Sbjct: 851 RSNEHQGIGFLSDPRRLNVALTRARYGLVILGNPKVL 887
>gi|313219712|emb|CBY30632.1| unnamed protein product [Oikopleura dioica]
Length = 857
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+GI +I +I+ Y QV L+ +L+ + + TVD YQG + +++ S ++ +
Sbjct: 466 AGIKPKNIAIISPYAAQVQLIAKLVGPTVSVRTVDGYQGGEAEVVILSLVRSNIDGTTGF 525
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
L+DR+RL VA+SRA+ I++GD
Sbjct: 526 LSDRRRLNVAVSRARKSCIVIGD 548
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ +LDK ++EI +VD +QGR+K I+ S
Sbjct: 721 GIKPEQIGVITPYEGQRAYLVQFMSINSTILDKRDQYLEVEITSVDAFQGREKDFIILSC 780
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++RAK+ L+ILG+
Sbjct: 781 VRANDSQSIGFLSDPRRLNVALTRAKYGLLILGN 814
>gi|207344536|gb|EDZ71650.1| YHR164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1435
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKSIILYSST-CTS 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK I+ S S
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 KSKESKILNDRKRLTVAISRAKHK 81
+ +L + +R+ VA++RAK K
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSK 1435
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDK---------DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+ VI+ Y+ QV LLK L++ I+INT+D +QG+++ I+ S T ++
Sbjct: 513 VAVISPYKQQVELLKELIEDWEDLKPFLAQIDINTIDSFQGQERDIVYISLTRSNSENAI 572
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VAI+RA+ KL+++GD
Sbjct: 573 GFLSDIRRMNVAITRARMKLVVIGD 597
>gi|448377755|ref|ZP_21560451.1| DNA replication factor Dna2 [Halovivax asiaticus JCM 14624]
gi|445655699|gb|ELZ08544.1| DNA replication factor Dna2 [Halovivax asiaticus JCM 14624]
Length = 920
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVIA +R QVS ++R + D+ ++TVD++QG + +I+ S S + I
Sbjct: 820 AGLDREDIGVIAPFRAQVSEIERRVPADVTVDTVDRFQGSSQEVIVVSFV-ASGDLDGPI 878
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
D +R+ V ++R K L+++GD + +
Sbjct: 879 FEDYRRINVGLTRPKRALVLVGDAEAL 905
>gi|170030074|ref|XP_001842915.1| potentail helicase MOV-10 [Culex quinquefasciatus]
gi|167865921|gb|EDS29304.1| potentail helicase MOV-10 [Culex quinquefasciatus]
Length = 517
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 12 IGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IGVI+ Y QV+ LK + DIEI +V+QYQGR+K II+ ST +++K L+D
Sbjct: 322 IGVISPYALQVAHLKSRFREPKWADIEIGSVEQYQGREKPIIIV-STVRTRTKCVGFLSD 380
Query: 68 RKRLTVAISRAKHKLIILGD 87
KRL V ++RA+ +II+GD
Sbjct: 381 VKRLNVTLTRAQALMIIVGD 400
>gi|302894621|ref|XP_003046191.1| hypothetical protein NECHADRAFT_76779 [Nectria haematococca mpVI
77-13-4]
gi|256727118|gb|EEU40478.1| hypothetical protein NECHADRAFT_76779 [Nectria haematococca mpVI
77-13-4]
Length = 1389
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR Q+ LLK L +E++T D++QGRDK +I+ S ++ +
Sbjct: 1205 LTVGVPETEIGVMTHYRAQLFLLKEKLKGYAGVEMHTTDRFQGRDKEVIVLSLVRSNDAC 1264
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1265 NIGDLLKDWRRINVAFTRAKTKLLVIG 1291
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ LLDK ++EI +VD +QGR+K I+ S
Sbjct: 753 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 812
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++RAK+ L+ILG+
Sbjct: 813 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGN 846
>gi|157123114|ref|XP_001660014.1| hypothetical protein AaeL_AAEL009397 [Aedes aegypti]
gi|108874507|gb|EAT38732.1| AAEL009397-PA [Aedes aegypti]
Length = 646
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 12 IGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IG+I+ Y +Q+ L+ L +DIEI + +QYQGR+K+II+ S T S+SK L +
Sbjct: 487 IGLISPYASQILHLRTLCKARGWEDIEIGSAEQYQGREKAIIIMS-TVRSRSKHLGFLTN 545
Query: 68 RKRLTVAISRAKHKLIILGD 87
KRL V I+RA+ +II+GD
Sbjct: 546 AKRLNVTITRARALMIIIGD 565
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ LLDK ++EI +VD +QGR+K I+ S
Sbjct: 753 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 812
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++RAK+ L+ILG+
Sbjct: 813 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGN 846
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q S L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 762 LKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMS 821
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RAK+ LI++G+ +V+
Sbjct: 822 CVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVL 860
>gi|449664168|ref|XP_002168656.2| PREDICTED: uncharacterized protein LOC100204258 [Hydra
magnipapillata]
Length = 3199
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTSKSKES- 62
+ I VI YR Q SL+K+ L+K IE++T+D +QGR+K I+++S S +ES
Sbjct: 1586 NEIAVITPYRYQASLIKQELNKKLAQLEGIEVDTIDGFQGREKRIVIFSCVRASNHQESI 1645
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L++ +R+ VA++RAK LIIL + I
Sbjct: 1646 GFLSNPQRMNVALTRAKDVLIILANCNSI 1674
>gi|336465901|gb|EGO54066.1| hypothetical protein NEUTE1DRAFT_131702 [Neurospora tetrasperma FGSC
2508]
gi|350287264|gb|EGZ68511.1| Dna2-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 1505
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 19/108 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLK------------------RLLDKDIEINTVDQYQGR 44
L G+P IGV+ YR+Q++LLK ++ ++IE++T D++QGR
Sbjct: 1218 LTVGVPASEIGVMTHYRSQLALLKHNMKNTLGGSAGAIRAGVKVAAEEIEMHTADRFQGR 1277
Query: 45 DKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
DKS+++ S +++ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 1278 DKSVVVLSLVRSNEGCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1325
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYSSTC 55
G+ D IGVI YR+Q L+ L + +E+++VD +QGR+K I++S
Sbjct: 712 GVSPDGIGVITPYRSQCRFLRNYLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVR 771
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQV 90
++ + D +RL V+++RAK LII+G++Q+
Sbjct: 772 SNHRQGIGFAVDGRRLNVSLTRAKRGLIIMGNVQL 806
>gi|164426014|ref|XP_960282.2| hypothetical protein NCU04749 [Neurospora crassa OR74A]
gi|157071165|gb|EAA31046.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1695
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 19/108 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLK------------------RLLDKDIEINTVDQYQGR 44
L G+P IGV+ YR+Q++LLK ++ ++IE++T D++QGR
Sbjct: 1408 LTVGVPASEIGVMTHYRSQLALLKHNMKNTLGGSAGAIRAGVKVAAEEIEMHTADRFQGR 1467
Query: 45 DKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
DKS+++ S +++ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 1468 DKSVVVLSLVRSNEGCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1515
>gi|40882306|emb|CAF06129.1| related to DNA helicase [Neurospora crassa]
Length = 1735
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 19/108 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLK------------------RLLDKDIEINTVDQYQGR 44
L G+P IGV+ YR+Q++LLK ++ ++IE++T D++QGR
Sbjct: 1448 LTVGVPASEIGVMTHYRSQLALLKHNMKNTLGGSAGAIRAGVKVAAEEIEMHTADRFQGR 1507
Query: 45 DKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
DKS+++ S +++ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 1508 DKSVVVLSLVRSNEGCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1555
>gi|440298360|gb|ELP90998.1| suppressor with morphological effect on genitalia family protein
(smg-2), partial [Entamoeba invadens IP1]
Length = 309
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
GI + IG+I+ Y Q LL + K IE+ +VD +QG +K I+ S +++ + L
Sbjct: 170 GIKDNEIGIISPYSTQRELLG-VAHKTIEVASVDGFQGNEKEFIIISCVRSNEQQGIGFL 228
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVIIA 93
+D +RL VA++RAK L+I+GD +I+
Sbjct: 229 SDHRRLNVALTRAKRGLVIVGDAHTLIS 256
>gi|389746349|gb|EIM87529.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 815
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
GI I +I Y+ QV+LL +L D+EI TVD QGR+K ++ S +++ +E
Sbjct: 700 GILPSQIAIITPYQAQVTLLTSILRPTYGTDLEIGTVDGMQGREKEAVIISLVRSNEKRE 759
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L +++RL VA++RA+ L I+GD
Sbjct: 760 VGFLKEKRRLNVAMTRARRHLCIVGD 785
>gi|226500364|ref|NP_001146818.1| uncharacterized protein LOC100280423 [Zea mays]
gi|219888873|gb|ACL54811.1| unknown [Zea mays]
Length = 399
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 12/85 (14%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GVI+ YR+QV LLK I+++TVD +QGR+K I+++S C +KE K
Sbjct: 218 VGVISPYRHQVKLLKDSFRSTFGDQSRELIDVSTVDGFQGREKEIVIFS--CVRCNKEQK 275
Query: 64 I--LNDRKRLTVAISRAKHKLIILG 86
I ++D +R+ VAI+RAK ++++G
Sbjct: 276 IGFVSDFRRMNVAITRAKSAVLVVG 300
>gi|387595778|gb|EIJ93401.1| hypothetical protein NEPG_01743 [Nematocida parisii ERTm1]
Length = 1360
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
+G+I+ Y+ QVS LK+ + +DI+I TVD +QG++K I+ S T +SK L+D +R+
Sbjct: 1242 VGIISPYKGQVSRLKKYI-RDIDIATVDGFQGQEKDCIIIS---TVRSKRIGFLSDIRRM 1297
Query: 72 TVAISRAKHKLIILGDLQVI 91
VA++RA++ LII+G ++++
Sbjct: 1298 NVALTRARYTLIIVGSMRLL 1317
>gi|387594020|gb|EIJ89044.1| hypothetical protein NEQG_00863 [Nematocida parisii ERTm3]
Length = 1229
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
+G+I+ Y+ QVS LK+ + +DI+I TVD +QG++K I+ S T +SK L+D +R+
Sbjct: 1111 VGIISPYKGQVSRLKKYI-RDIDIATVDGFQGQEKDCIIIS---TVRSKRIGFLSDIRRM 1166
Query: 72 TVAISRAKHKLIILGDLQVI 91
VA++RA++ LII+G ++++
Sbjct: 1167 NVALTRARYTLIIVGSMRLL 1186
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L SG+ +GVI Y Q + L + + ++IE+ +VD +QGR+K +I+ S
Sbjct: 762 LRSGVKPQQVGVITPYEGQRAYLVQHMQFQGALHSKLYQEIEVASVDAFQGREKDLIVMS 821
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RA++ LII+G+ +V+
Sbjct: 822 CVRSNEHQGIGFLNDPRRLNVALTRARYGLIIVGNPKVL 860
>gi|380092552|emb|CCC09829.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1750
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 19/108 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD------------------KDIEINTVDQYQGR 44
L G+P IGV+ YR+Q++LLK L ++IE++T D++QGR
Sbjct: 1434 LTVGVPASEIGVMTHYRSQLALLKHNLKNTLGGSAGAIRAGVKVGAEEIEMHTADRFQGR 1493
Query: 45 DKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
DKS+++ S +++ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 1494 DKSVVVLSLVRSNEGCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1541
>gi|322699514|gb|EFY91275.1| putative DNA helicase [Metarhizium acridum CQMa 102]
Length = 1535
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P +GV+ YR Q+ LLK L +E++T D++QGRDK +++ S ++++
Sbjct: 1338 LAVGVPASEVGVMTHYRAQLFLLKDRLKGYAGVEMHTTDRFQGRDKEVVVLSLVRSNEAC 1397
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ VA +RAK KL+++G + +
Sbjct: 1398 NIGDLLKDWRRINVAFTRAKTKLLVVGSMNTL 1429
>gi|336276628|ref|XP_003353067.1| hypothetical protein SMAC_03385 [Sordaria macrospora k-hell]
Length = 1750
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 19/108 (17%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD------------------KDIEINTVDQYQGR 44
L G+P IGV+ YR+Q++LLK L ++IE++T D++QGR
Sbjct: 1434 LTVGVPASEIGVMTHYRSQLALLKHNLKNTLGGSAGAIRAGVKVGAEEIEMHTADRFQGR 1493
Query: 45 DKSIILYSSTCTSKSKE-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
DKS+++ S +++ ++L D +R+ VA +RAK KL+++G + +
Sbjct: 1494 DKSVVVLSLVRSNEGCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1541
>gi|196001321|ref|XP_002110528.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
gi|190586479|gb|EDV26532.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
Length = 1070
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----VSLLKRL------LDKDIEINTVDQYQGRDKSIILYS 52
L +GI + IGVI Y +Q V+L+K L + +E+ +VD +QGR+K I+ S
Sbjct: 766 LRTGIKPEQIGVITPYESQRAYVVTLMKTRGSMQDDLYQKVEVASVDAFQGREKDYIILS 825
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL V+I+RAK+ LII+G+ +V+
Sbjct: 826 CVRSNEYQGIGFLNDPRRLNVSITRAKNGLIIIGNARVL 864
>gi|388856197|emb|CCF50188.1| related to DNA2-DNA helicase [Ustilago hordei]
Length = 1441
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 22/103 (21%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---------------DIEINTVDQYQGRDKSIIL 50
G D I V+ YR Q+ LL+ LL +IE+ T DQ QGRDK +IL
Sbjct: 1312 GCKPDQIAVVTPYRQQIKLLRTLLLTQSQTQLTQARGEDLGEIELLTADQSQGRDKDVIL 1371
Query: 51 -------YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
+S+ + ++LND +RL V ++RAK KL+++G
Sbjct: 1372 VTFTRANFSTAMDAAGNTGELLNDLRRLNVTLTRAKKKLVMIG 1414
>gi|448474949|ref|ZP_21602714.1| DNA replication factor Dna2 [Halorubrum aidingense JCM 13560]
gi|445816941|gb|EMA66823.1| DNA replication factor Dna2 [Halorubrum aidingense JCM 13560]
Length = 897
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D +GVIA +R QV+ + R D+ ++TVD++QG K +I+ S S + I
Sbjct: 799 AGVDPDDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVIVVS-LVASGGLDGPI 855
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L ++GD
Sbjct: 856 FEDHRRMNVALTRAKKQLTLVGD 878
>gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
Length = 635
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LL+ L K D+EI+TVD +QGR+K I+ S ++
Sbjct: 517 SGVQPSDIGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSK 576
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L D++R+ VA++R++ + I+ D + +
Sbjct: 577 KEVGFLKDQRRMNVAVTRSRRQCCIVCDTETV 608
>gi|154292679|ref|XP_001546910.1| hypothetical protein BC1G_14724 [Botryotinia fuckeliana B05.10]
Length = 1615
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSK 58
SLI+ G+ IGV+ YR+Q++LLK L K +E++T D++QGRDK +I+ S +++
Sbjct: 1387 SLIAVGVDPTEIGVMTHYRSQLALLKDSLHNAKGVEMHTADRFQGRDKEVIVLSLVRSNE 1446
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 1447 GGSIGELLKDWRRINVAFTRAKTKLLVVG 1475
>gi|449017109|dbj|BAM80511.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]
Length = 1560
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEIN---------TVDQYQGRDKSIILYSST-C 55
GI HIG+ + R QVSL++ + I T+DQ+QGRDK ++L S
Sbjct: 1438 GIERQHIGITSPLRAQVSLIQNQFHQGQRIRNAGTLPECRTIDQFQGRDKDVLLVSLVRS 1497
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S ++ ++L D +RL VA++RA+ KL+ +G Q +
Sbjct: 1498 NSNARIGQVLRDWRRLNVAMTRARCKLVFVGSAQTM 1533
>gi|409043697|gb|EKM53179.1| hypothetical protein PHACADRAFT_147492 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1180
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
SG+ + IGV++ YR Q+ L+ LL K +EI T D+ QGRDK +I+ S ++ +
Sbjct: 993 SGVTPNQIGVLSLYRQQIKLVSYLLREHKGVEILTADRSQGRDKDVIVISMVRSNTEGQI 1052
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ V+ +RA+ KL+I+G + +
Sbjct: 1053 GDLLKDWRRINVSFTRARCKLVIIGSRKTL 1082
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSSTC 55
G+ IGVI YR+Q L+ L + +EI++VD +QGR+K I+ S
Sbjct: 688 GVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVR 747
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQV 90
++ + + + D +RL V+++RAK LII+G++Q+
Sbjct: 748 SNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQL 782
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IPT+ VI Y QV L+RL ++ DIE+NTVD +QGR+ I+ S ++K
Sbjct: 555 IPTN---VITPYDAQVRYLRRLFEEHNIDIEVNTVDGFQGRENEAIVISFV---RTKNFG 608
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 609 FLKDLRRLNVAITRAKRKLILIGN 632
>gi|255013517|ref|ZP_05285643.1| putative helicase [Bacteroides sp. 2_1_7]
gi|410103629|ref|ZP_11298550.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
gi|409236358|gb|EKN29165.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
Length = 640
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I I+TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITIHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQVSLLKR-------LLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q + L + LLDK ++EI +VD +QGR+K I+ S
Sbjct: 755 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 814
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++RAK+ L+ILG+
Sbjct: 815 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGN 848
>gi|156053429|ref|XP_001592641.1| hypothetical protein SS1G_06882 [Sclerotinia sclerotiorum 1980]
gi|154704660|gb|EDO04399.1| hypothetical protein SS1G_06882 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1559
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSK 58
SLIS G+ IGV+ YR+Q++LLK L K +E++T D++QGRDK + + S +++
Sbjct: 1418 SLISVGVDPTEIGVMTHYRSQLALLKDSLRTAKGVEMHTADRFQGRDKEVTILSLVRSNE 1477
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILG 86
+ ++L D +R+ VA +RAK KL+++G
Sbjct: 1478 AGNIGELLKDWRRINVAFTRAKTKLLVVG 1506
>gi|18395518|ref|NP_565299.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|15027927|gb|AAK76494.1| putative helicase [Arabidopsis thaliana]
gi|20197343|gb|AAM15033.1| putative helicase [Arabidopsis thaliana]
gi|20197741|gb|AAD17447.2| putative helicase [Arabidopsis thaliana]
gi|20259169|gb|AAM14300.1| putative helicase [Arabidopsis thaliana]
gi|330250587|gb|AEC05681.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 639
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSSTCTSKS 59
SG+ IG+I Y QV LL+ L K D+EI+TVD +QGR+K I+ S ++
Sbjct: 521 SGVQPSDIGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSK 580
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
KE L D++R+ VA++R++ + I+ D + +
Sbjct: 581 KEVGFLKDQRRMNVAVTRSRRQCCIVCDTETV 612
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G ++ Y+ QV +L++ + K IE+NTVD +QGR+K +I++S SK
Sbjct: 1954 VGFVSPYKEQVRVLRQEITKSGIPTTVSIEVNTVDGFQGREKDVIIFSCVRASKRGGIGF 2013
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVII 92
L D +RL VAI+RA+ L ++G++ ++
Sbjct: 2014 LRDIRRLNVAITRARFCLYVVGNVNTLV 2041
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q S + + + ++E+ VD +QGR+K II+ +
Sbjct: 741 LKAGIKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVT 800
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK LII+G+ +V+
Sbjct: 801 CVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVL 839
>gi|429192023|ref|YP_007177701.1| DNA/RNA helicase [Natronobacterium gregoryi SP2]
gi|448324733|ref|ZP_21514145.1| DNA replication factor Dna2 [Natronobacterium gregoryi SP2]
gi|429136241|gb|AFZ73252.1| DNA/RNA helicase, superfamily I [Natronobacterium gregoryi SP2]
gi|445617696|gb|ELY71289.1| DNA replication factor Dna2 [Natronobacterium gregoryi SP2]
Length = 891
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IG+IA +R QVS + + + ++TVD++QG + +I+ S T T S E I
Sbjct: 791 AGLERTDIGIIAPFRAQVSEISNHVPDAVTVDTVDRFQGSSQEVIVVSFTATG-SLEGPI 849
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 850 FEDHRRINVALTRPKRGLVLVGD 872
>gi|401625382|gb|EJS43392.1| dna2p [Saccharomyces arboricola H-6]
Length = 1527
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTC-TS 57
++SGI + IGV+ YR Q+ LLK+ +K +EI T DQ+QGRDK I+ S S
Sbjct: 1357 ILSGILCEDIGVMTLYRAQLRLLKKKFNKGAYKGLEILTADQFQGRDKKCIIISMVRRNS 1416
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
+ +L + +R+ VA++RAK KLII+G I ++ P + NL
Sbjct: 1417 QLNGGSLLRELRRVNVAMTRAKSKLIIIGSKSTIGSV---PEIKSFVNL 1462
>gi|392562935|gb|EIW56115.1| Dna2-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1189
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKE-S 62
G+ D IGVI+ YR Q+ LL LL K++E+ T D+ QGRDK I+ S ++
Sbjct: 1007 GVRQDQIGVISLYRQQLKLLSYLLQDRKELEMLTADRSQGRDKDCIIISMVRSNDDGMIG 1066
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ D +R+ V+ +RA+ KLII+G + +
Sbjct: 1067 ELVKDWRRMNVSFTRARSKLIIIGSRKTL 1095
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 12 IGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
IGVI Y+ QV +KR + ++DI++++VD +QGR+K II++S + L+D
Sbjct: 1206 IGVITPYKQQVHEIKRRISPVNQDIDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDV 1265
Query: 69 KRLTVAISRAKHKLIILGD 87
+R+ V ++RA+ LI++G+
Sbjct: 1266 RRMNVGLTRARSSLIVIGN 1284
>gi|254573166|ref|XP_002493692.1| Essential tripartite DNA replication factor with single-stranded
DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238033491|emb|CAY71513.1| Essential tripartite DNA replication factor with single-stranded
DNA-dependent ATPase [Komagataella pastoris GS115]
Length = 1397
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLK-RLLD--KDIEINTVDQYQGRDKSIILYSSTCTS 57
SLI+ G + IGV++ YR QV L+K RL+ +++E+ T DQ+QGRDK I+ S ++
Sbjct: 1233 SLINCGCDSKEIGVMSFYRAQVKLMKTRLVSHVQNVEVMTADQFQGRDKECIIISLVRSN 1292
Query: 58 KSKE-SKILNDRKRLTVAISRAKHKLIILG 86
+ +L + +R+ VAI+RAK KL+ILG
Sbjct: 1293 ATNSVGNLLKEWRRINVAITRAKSKLLILG 1322
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLL-------KRL---LDKDIEINTVDQYQGRDKSIILYSSTC 55
G IG+I Y Q S L RL L K+IE+ +VD +QGR+K I+ S
Sbjct: 863 GTKPSQIGIITPYEGQRSFLVNNMQRTGRLPSDLYKEIEVASVDSFQGREKDFIILSCVR 922
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L D +RL VA++RA++ LIILG+ +V+
Sbjct: 923 SNENQGIGFLQDPRRLNVALTRARYGLIILGNARVL 958
>gi|15790495|ref|NP_280319.1| DNA helicase [Halobacterium sp. NRC-1]
gi|10580995|gb|AAG19799.1| DNA helicase [Halobacterium sp. NRC-1]
Length = 821
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QV+ + R + ++TVD++QG K +I+ S + E I
Sbjct: 720 AGLDPGEIGVIAPFRAQVAEIGRRTPAGVAVDTVDRFQGSSKEVIVVSFVARG-TLEGPI 778
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA+SRAK L+++GD
Sbjct: 779 FEDHRRVNVALSRAKKSLVLVGD 801
>gi|379736881|ref|YP_005330387.1| hypothetical protein BLASA_3495 [Blastococcus saxobsidens DD2]
gi|378784688|emb|CCG04357.1| Conserved protein of unknown function; putative AAA ATPase
[Blastococcus saxobsidens DD2]
Length = 1086
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 14 VIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK---ILNDRKR 70
V+A Y +QV L++ LL + TVD++QG++ +++YS T TS + L D R
Sbjct: 979 VVAPYNHQVGLIRELLPDGARVGTVDKFQGQEAPVVIYSMTSTSAEDAPRGVSFLYDLHR 1038
Query: 71 LTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGN 105
L VA+SRAK +++ Q++ A V P R N
Sbjct: 1039 LNVAVSRAKALAVVVMSEQLLDAAVRTPEQLRQVN 1073
>gi|328354481|emb|CCA40878.1| DNA replication ATP-dependent helicase Dna2 [Komagataella pastoris
CBS 7435]
Length = 1413
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLK-RLLD--KDIEINTVDQYQGRDKSIILYSSTCTS 57
SLI+ G + IGV++ YR QV L+K RL+ +++E+ T DQ+QGRDK I+ S ++
Sbjct: 1249 SLINCGCDSKEIGVMSFYRAQVKLMKTRLVSHVQNVEVMTADQFQGRDKECIIISLVRSN 1308
Query: 58 KSKE-SKILNDRKRLTVAISRAKHKLIILG 86
+ +L + +R+ VAI+RAK KL+ILG
Sbjct: 1309 ATNSVGNLLKEWRRINVAITRAKSKLLILG 1338
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSSTC 55
G+ IGVI YR+Q L+ L + +EI++VD +QGR+K I+ S
Sbjct: 688 GVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVR 747
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQV 90
++ + + + D +RL V+++RAK LII+G++Q+
Sbjct: 748 SNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQL 782
>gi|313126003|ref|YP_004036273.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
gi|448285843|ref|ZP_21477082.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
gi|312292368|gb|ADQ66828.1| DNA/RNA helicase, superfamily I [Halogeometricum borinquense DSM
11551]
gi|445575873|gb|ELY30336.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
Length = 902
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + + D+ ++TVD++QG K +++ S S + + I
Sbjct: 804 AGVEPDDIGVIAPFRAQVAEIGK--RTDVTVDTVDRFQGSSKEVVIVSFV-ASGTLDGPI 860
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 861 FEDHRRINVALTRAKKSLVLVGD 883
>gi|401826435|ref|XP_003887311.1| putative DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998470|gb|AFM98330.1| putative DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 556
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S++ + + +G+IA Y +QV LL+ ++D +E++TVD +QG+++ I+ + + +E
Sbjct: 436 SIVEILKGEEVGIIAPYTSQVLLLQEIVD--VEVSTVDGFQGQERDYIILTLVRCNDREE 493
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L++ KRL VA++R K L+I+GD
Sbjct: 494 FGFLDNEKRLNVALTRCKKGLVIVGD 519
>gi|256840040|ref|ZP_05545549.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738970|gb|EEU52295.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 640
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 11/89 (12%)
Query: 10 DHI--GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSK 58
+HI G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++
Sbjct: 518 EHIDFGLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANE 577
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGD 87
+ LND +R+ VAI+RA+ KL+ILGD
Sbjct: 578 DGKIGFLNDLRRMNVAITRARMKLMILGD 606
>gi|71021889|ref|XP_761175.1| hypothetical protein UM05028.1 [Ustilago maydis 521]
gi|46100655|gb|EAK85888.1| hypothetical protein UM05028.1 [Ustilago maydis 521]
Length = 1454
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 33/114 (28%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK-----------DIEINTVDQYQGRDKSIILYSST 54
G D I V+ YR Q+ LL+ LLDK IE+ T DQ QGRDK +IL S T
Sbjct: 1314 GCRPDQIAVVTPYRQQLKLLRSLLDKCGDGQQLRRLDAIELLTADQSQGRDKDVILVSFT 1373
Query: 55 ------CTSKS----------------KESKILNDRKRLTVAISRAKHKLIILG 86
C+ S ++LND +RL V ++RAK KLI++G
Sbjct: 1374 RANYQRCSGSSSTMAEAYREEEGAQGGNTGELLNDVRRLNVTLTRAKRKLILIG 1427
>gi|302680102|ref|XP_003029733.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
gi|300103423|gb|EFI94830.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
Length = 708
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+G+ I VI Y+ Q+ LL LL D+EI TVD QGR+K ++ S ++ +
Sbjct: 592 AGVLPSQIAVITPYQAQLGLLTSLLRPLHGPDLEIGTVDGMQGREKEAVIISMVRSNDKR 651
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L +++R+ VA++RAK +L ++GD
Sbjct: 652 EVGFLKEKRRMNVAMTRAKRQLCVVGD 678
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IPT+ VI Y QV L+RL ++ D+E+NTVD +QGR+ I+ S ++K
Sbjct: 545 IPTN---VITPYDAQVRYLRRLFEEQNIDVEVNTVDGFQGRENEAIVISFV---RTKNFG 598
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 599 FLKDLRRLNVAITRAKRKLILIGN 622
>gi|253742031|gb|EES98885.1| DNA helicase HCS1 [Giardia intestinalis ATCC 50581]
Length = 734
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
P IG I+ Y QVSLL +D K +EI+TVD +QGR+K II+ S ++ +
Sbjct: 613 PQAAIGCISPYAAQVSLLVGRMDAHVAKGLEISTVDGFQGREKEIIIISFVRSNDEGDVG 672
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L+D +RL V+I+RAK ++I+G+
Sbjct: 673 FLSDVRRLNVSITRAKRLVVIVGN 696
>gi|374339063|ref|YP_005095799.1| DNA helicase [Marinitoga piezophila KA3]
gi|372100597|gb|AEX84501.1| DNA helicase, putative [Marinitoga piezophila KA3]
Length = 649
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
G+I Y++Q+ LK D +NTVD +QGR+ +I+ S T ++ L D +RL
Sbjct: 550 FGIITPYKDQMKYLKE--KTDFYVNTVDGFQGRENDVIILSLTRSNDEGTIGFLKDERRL 607
Query: 72 TVAISRAKHKLIILGDLQVI 91
VAI+RA+ KLII+GD+ +
Sbjct: 608 NVAITRARKKLIIIGDISTL 627
>gi|367029903|ref|XP_003664235.1| hypothetical protein MYCTH_2119294 [Myceliophthora thermophila ATCC
42464]
gi|347011505|gb|AEO58990.1| hypothetical protein MYCTH_2119294 [Myceliophthora thermophila ATCC
42464]
Length = 1427
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL----------------DKDIEINTVDQYQGRDK 46
L G+P IG++ YR+Q++LLK L +++E++T D++QGRDK
Sbjct: 1188 LAVGVPASEIGIVTHYRSQLALLKHTLLRSAAAATAAAIGGGDIREVEMHTADRFQGRDK 1247
Query: 47 SIILYSST-CTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
+++ S + ++L D +R+ VA +RAK KL+++G
Sbjct: 1248 QVVILSLVRSNEQCAIGELLKDWRRINVAFTRAKTKLLVVG 1288
>gi|169236231|ref|YP_001689431.1| helicase [Halobacterium salinarum R1]
gi|167727297|emb|CAP14083.1| ATP-dependent DNA helicase Dna2 [Halobacterium salinarum R1]
Length = 878
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R QV+ + R + ++TVD++QG K +I+ S + E I
Sbjct: 777 AGLDPGEIGVIAPFRAQVAEIGRRTPAGVAVDTVDRFQGSSKEVIVVSFVARG-TLEGPI 835
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA+SRAK L+++GD
Sbjct: 836 FEDHRRVNVALSRAKKSLVLVGD 858
>gi|448485068|ref|ZP_21606434.1| DNA replication factor Dna2 [Halorubrum arcis JCM 13916]
gi|445818761|gb|EMA68611.1| DNA replication factor Dna2 [Halorubrum arcis JCM 13916]
Length = 898
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
D +GVIA +R QV+ + R D+ ++TVD++QG K +IL S T + I D +
Sbjct: 805 DDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVILVSFVATG-DLDGPIFEDHR 861
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK +L I+GD
Sbjct: 862 RVNVALTRAKKQLTIVGD 879
>gi|448452871|ref|ZP_21593544.1| DNA replication factor Dna2 [Halorubrum litoreum JCM 13561]
gi|445808422|gb|EMA58492.1| DNA replication factor Dna2 [Halorubrum litoreum JCM 13561]
Length = 898
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
D +GVIA +R QV+ + R D+ ++TVD++QG K +IL S T + I D +
Sbjct: 805 DDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVILVSFVATG-DLDGPIFEDHR 861
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK +L I+GD
Sbjct: 862 RVNVALTRAKKQLTIVGD 879
>gi|448425801|ref|ZP_21582973.1| DNA replication factor Dna2 [Halorubrum terrestre JCM 10247]
gi|445680216|gb|ELZ32666.1| DNA replication factor Dna2 [Halorubrum terrestre JCM 10247]
Length = 898
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
D +GVIA +R QV+ + R D+ ++TVD++QG K +IL S T + I D +
Sbjct: 805 DDVGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVILVSFVATG-DLDGPIFEDHR 861
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK +L I+GD
Sbjct: 862 RVNVALTRAKKQLTIVGD 879
>gi|63054958|gb|AAY29017.1| dna2-nam7 helicase family protein [Pyrococcus sp. EX2]
Length = 178
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L++ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 101 LNAGVTPEWIGVITPYDDQSDLIRMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKRGEI 160
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 161 GFLKDLRRLNVSLTRAK 177
>gi|347834929|emb|CCD49501.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1632
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSK 58
SLI+ G+ IGV+ YR+Q++LLK L K +E++T D++QGRDK +I+ S +++
Sbjct: 1404 SLIAVGVDPTEIGVMTHYRSQLALLKDSLRNAKGVEMHTADRFQGRDKEVIVLSLVRSNE 1463
Query: 59 SKE-SKILNDRKRLTVAISRAKHKLIILG 86
++L D +R+ VA +RAK KL+++G
Sbjct: 1464 GGSIGELLKDWRRINVAFTRAKTKLLVVG 1492
>gi|449704358|gb|EMD44616.1| Hypothetical protein EHI5A_197030 [Entamoeba histolytica KU27]
Length = 250
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++ +N
Sbjct: 39 IEENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVN 98
Query: 67 DRKRLTVAISRAKHKLIILGDLQVII 92
D KRL VA+ RAK LII+G++Q +I
Sbjct: 99 DYKRLNVALKRAKSGLIIIGNIQTLI 124
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q S + + + ++E+ VD +QGR+K II+ +
Sbjct: 745 LKAGIKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVT 804
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK LII+G+ +V+
Sbjct: 805 CVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVL 843
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +GI + IG+I Y Q + L + + ++IE+ +VD +QGR+K II+ S
Sbjct: 774 LRAGIKPEQIGLITPYEGQRAYLVQFMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMS 833
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 834 CVRSNELLGIGFLNDPRRLNVALTRAKYGIIIIGNPKVL 872
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTC 55
G+ D IG+I Y Q + L + + + IEI +VD +QGR+K I+ S
Sbjct: 776 GVRPDQIGIITPYEGQRAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVR 835
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ LND +RL VA++RAK+ L+I+G+ +V+
Sbjct: 836 SNENQGIGFLNDPRRLNVALTRAKYGLLIVGNPKVL 871
>gi|448500080|ref|ZP_21611559.1| DNA replication factor Dna2 [Halorubrum coriense DSM 10284]
gi|445696802|gb|ELZ48881.1| DNA replication factor Dna2 [Halorubrum coriense DSM 10284]
Length = 898
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R D ++TVD++QG K +I+ S T + I
Sbjct: 800 AGVDPDDIGVIAPFRAQVAEIGR--RTDATVDTVDRFQGSSKEVIVVSLVATG-DLDGPI 856
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L ++GD
Sbjct: 857 FEDHRRMNVALTRAKKQLTLVGD 879
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q S LK+ L K +E+ +VD +QGR+K I+ S
Sbjct: 795 AGVKPSQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKQVEVASVDAFQGREKDYIILSCV 854
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RA++ L+ILG+ +V+
Sbjct: 855 RSNEHQGIGFLSDPRRLNVALTRARYGLVILGNPKVL 891
>gi|405355805|ref|ZP_11024917.1| hypothetical protein A176_1051 [Chondromyces apiculatus DSM 436]
gi|397091077|gb|EJJ21904.1| hypothetical protein A176_1051 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKR---LLDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ + VI Y Q L+ L D+E++TVD +QGR+K I+ S T ++
Sbjct: 517 LAAGLSPRELAVITPYSAQAHRLRERIEALSPDVEVDTVDAFQGREKDAIIVSLTRSNGE 576
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
+ LND +R+ VA++RA+ L ++GD
Sbjct: 577 GQLGFLNDLRRMNVALTRARRHLFVVGD 604
>gi|384498945|gb|EIE89436.1| hypothetical protein RO3G_14147 [Rhizopus delemar RA 99-880]
Length = 608
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L G+ D IGVI Y QVS L+R + ++ IE+ TVD +QGR+K IL S ++
Sbjct: 479 LNDGLQQDQIGVITPYAFQVSKLRREIRENWPGIEVGTVDGFQGREKEAILLSLVRSNDI 538
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
E L +++RL VA++RAK L ++ D + ++
Sbjct: 539 GEVGFLAEKRRLNVAMTRAKRHLCVICDSETLLG 572
>gi|448733625|ref|ZP_21715867.1| DNA replication factor Dna2 [Halococcus salifodinae DSM 8989]
gi|445802145|gb|EMA52452.1| DNA replication factor Dna2 [Halococcus salifodinae DSM 8989]
Length = 915
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R Q + ++R + D+ ++TVD++QG K II+ S T +S I
Sbjct: 817 AGVARTDIGVIAPFRAQAAAIRREV-PDVTVDTVDRFQGSAKEIIIVSFVATG-DLDSPI 874
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 875 FEDFRRVNVALTRAKKGLVLVGD 897
>gi|331082793|ref|ZP_08331916.1| hypothetical protein HMPREF0992_00840 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400412|gb|EGG80054.1| hypothetical protein HMPREF0992_00840 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 1201
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+IA YR Q LL RL + + +EINTVD +QGR+ I+ YS ++ +
Sbjct: 1082 AIIAGYRGQRDLLTRLYESNYKARFYNMTVEINTVDAFQGRETDIVFYSVVRSNDNGNLG 1141
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQ 89
L D +RL VA SRA+ L+++GD Q
Sbjct: 1142 FLKDVRRLNVAFSRARELLVVVGDHQ 1167
>gi|350296138|gb|EGZ77115.1| hypothetical protein NEUTE2DRAFT_142697, partial [Neurospora
tetrasperma FGSC 2509]
Length = 136
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+ D I V+ Y Q+S+L L D+ IE+ +VD +QGR+K I+ S ++ E
Sbjct: 16 AGVRPDDIAVVTPYNAQLSILAPLKDEFPGIELGSVDGFQGREKEAIIVSLVRSNDEGEV 75
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L I+GD + +
Sbjct: 76 GFLGEKRRLNVAMTRPKRSLTIIGDSETV 104
>gi|347832212|emb|CCD47909.1| similar to similar to tRNA-splicing endonuclease [Botryotinia
fuckeliana]
Length = 2019
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IG+I TY+ Q++ LKR ++IE NT D +QGR++ II++S +
Sbjct: 1735 IGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIG 1794
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ V ++RAK L +LGD
Sbjct: 1795 FLNDIRRMNVGLTRAKSSLWVLGD 1818
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLK---------RLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
I +++ Y+ Q+ LLK +L I +NT+D +QG+++ I+ S T ++ E
Sbjct: 519 IAIVSPYKEQIRLLKDQQQHWPGLQLYQDKISVNTIDSFQGQERDIVYISMTRSNTKGEI 578
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VA++RA+ KLII+GD
Sbjct: 579 GFLSDIRRMNVAMTRARKKLIIIGD 603
>gi|302789261|ref|XP_002976399.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
gi|300156029|gb|EFJ22659.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
Length = 766
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 11 HIGVIATYRNQVSLLK----RLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
H+ VI+ Y+ QV+ L+ +L KD I+INTVD +QGR+K I ++S +KSK
Sbjct: 594 HVAVISPYKYQVTTLRTRFAEVLGKDAARLIDINTVDGFQGREKDIAIFSCVRANKSKGI 653
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
++D +R+ V ++RA+ ++++G
Sbjct: 654 GFVSDFRRMNVGLTRARASMLVVG 677
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IG+I TY+ Q++ LKR ++IE NT D +QGR++ II++S +
Sbjct: 1735 IGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIG 1794
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ V ++RAK L +LGD
Sbjct: 1795 FLNDIRRMNVGLTRAKSSLWVLGD 1818
>gi|301310190|ref|ZP_07216129.1| DNA helicase [Bacteroides sp. 20_3]
gi|300831764|gb|EFK62395.1| DNA helicase [Bacteroides sp. 20_3]
Length = 640
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 10/90 (11%)
Query: 9 TDHIGVIATYRNQVSLLKRLL---DKDIE----INTVDQYQGRDKSIILYSSTCTSKSKE 61
++ IG+I Y+ Q+ +K +L KDI +NTVD +QG++K +IL S T KSK
Sbjct: 409 SNKIGIITPYKAQMKKIKEVLLGIRKDILDFVCVNTVDGFQGQEKDVILIS---TVKSKN 465
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +R+ V+I+RAKH LII+G+ +V+
Sbjct: 466 IGFLSDLRRINVSITRAKHSLIIIGNTKVL 495
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
SG+ IGV+ Y Q S L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 754 SGVMPSQIGVVTPYEGQRSYIVQYMQFNGSLRKDLYKEIEVASVDAFQGREKDYIILSCV 813
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RAK+ ++ILG+ +++
Sbjct: 814 RSNEHQGIGFLSDPRRLNVALTRAKYGVVILGNPKIL 850
>gi|358384596|gb|EHK22193.1| hypothetical protein TRIVIDRAFT_149633 [Trichoderma virens Gv29-8]
Length = 1731
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 12 IGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
I V+ Y Q LL+R L ++IEI+++D +QGR+ I+++ + ++S+E L D +
Sbjct: 1624 IAVLTPYSRQSELLQRALSGIQNIEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLR 1683
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK+ +I++G+
Sbjct: 1684 RMNVALTRAKYGMIVVGN 1701
>gi|170097065|ref|XP_001879752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645155|gb|EDR09403.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 829
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 21/101 (20%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRDKSIIL 50
IG+IA Y Q+SLL RL + D IEI TVD ++GR+K +I+
Sbjct: 670 IGIIAPYVAQISLLTRLFNTDATYQARFKEVLGDHRAMQLPHIEIKTVDGFEGREKEVII 729
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ + L D++RL V ++RAK LI++G + +
Sbjct: 730 FSTVRNNAGGYIGFLADKRRLNVGLTRAKRGLIVVGSINTL 770
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKR---LLDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ + VIA Y Q L+ +L D+E++TVD +QGR+K IL S T ++
Sbjct: 517 LAAGLSPRELAVIAPYSAQAFHLRERVEILSPDVEVDTVDAFQGREKDAILVSLTRSNAD 576
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VA++RA+ L ++GD
Sbjct: 577 GNLGFLTDLRRMNVAMTRARRHLFVVGD 604
>gi|426194030|gb|EKV43962.1| hypothetical protein AGABI2DRAFT_145440 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI + I +I Y+ QV+LL L+ ++EI TVD QGR+K I+ S ++ ++
Sbjct: 622 AGIDSSQIAIITPYQAQVTLLTSLIRPKYGSELEIGTVDGMQGREKEAIIISLVRSNDTR 681
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L +++RL VA++RA+ L I+GD
Sbjct: 682 EVGFLKEKRRLNVAMTRARRHLCIVGD 708
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL-DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
L +G+ I VI Y Q LL+ L+ + +EI+TVD +QGR+K ++ S ++ E
Sbjct: 513 LAAGVRPTEIAVITPYSAQARLLRTLIAEAGVEIDTVDGFQGREKEAVVISLVRSNAKGE 572
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VA++RA+ L++ GD
Sbjct: 573 LGFLTDTRRMNVALTRARRHLMVFGD 598
>gi|19075869|ref|NP_588369.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676175|sp|O94247.1|HCS1_SCHPO RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|4239673|emb|CAA20863.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe]
Length = 660
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ I V+ Y QV+L+++LL + ++E+ +VD+ QGR+K I++S ++
Sbjct: 540 LEAGLEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDV 599
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+E L +++RL VAI+R K L ++GD +
Sbjct: 600 REVGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
>gi|308162182|gb|EFO64591.1| DNA helicase HCS1 [Giardia lamblia P15]
Length = 734
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
IP IG I+ Y QVSLL ++ K +EI+TVD +QGR+K II+ S ++ +
Sbjct: 612 IPQTVIGCISPYAAQVSLLVGRMEAHVAKGLEISTVDGFQGREKEIIIISFVRSNDEGDV 671
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L+D +RL V+I+RAK ++++G+
Sbjct: 672 GFLSDVRRLNVSITRAKRLVVVIGN 696
>gi|262381717|ref|ZP_06074855.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|423336431|ref|ZP_17314178.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
gi|262296894|gb|EEY84824.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|409240906|gb|EKN33680.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
Length = 640
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 14/101 (13%)
Query: 3 LISGIPTDHIGVIATYRNQ----------VSLLKRLLDKDIEINTVDQYQGRDKSIILYS 52
L +G+ + IGV+ Y Q V +L L KDI++ +VD +QG++K I+
Sbjct: 667 LNAGVSPEQIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIM- 725
Query: 53 STCTSKSKESKI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
TC +++S I L+D +RL VAI+RA+ LI++G+ +V+
Sbjct: 726 -TCVRSNEKSGIGFLSDPRRLNVAITRARSGLIVIGNPKVL 765
>gi|145505511|ref|XP_001438722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405894|emb|CAK71325.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ IG+I Y QV LLK ++ DIEI+TVD +QGR+K I+ S +++ E L
Sbjct: 545 GVQKQDIGIITPYNAQVQLLKSKIN-DIEISTVDGFQGREKDCIIISMVRSNQMGEVGFL 603
Query: 66 NDRKRLTVAISRAKHKLIILGDLQVI 91
+ +R+ VA++RAK + ++GD + +
Sbjct: 604 CESRRMNVAVTRAKKFVCLIGDSETV 629
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 10 DHIGVIATYRNQVSLLK-RLLD-----KDI----EINTVDQYQGRDKSIILYSSTCTSKS 59
D +G+I+ YR Q ++ RLL KDI EI+TVD YQGR+K II+ S ++
Sbjct: 666 DEVGIISPYRAQCEYMRERLLQWGTAGKDIYEKVEISTVDAYQGREKEIIILSCVRNNEE 725
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ + D +RL V+++RA+ LI +G + +
Sbjct: 726 RTVGFIGDERRLNVSLTRARRGLIAIGKAEAL 757
>gi|282880635|ref|ZP_06289341.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
gi|281305530|gb|EFA97584.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
Length = 1143
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTC----- 55
P +GVI YRNQ++++++ ++K D+ I+TV++YQG + II+YS T
Sbjct: 1026 PLRTVGVIVPYRNQIAMIRQEIEKTGNTALKDVCIDTVERYQGSQRDIIIYSFTIQHLYQ 1085
Query: 56 ----TSKS-KESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
TS S E L DRK L VAI+RA+ +LIILG+ ++ A
Sbjct: 1086 LDFLTSNSFYEDDKLIDRK-LNVAITRARKQLIILGNQPILSA 1127
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 12 IGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G ++ Y+ QV +L++ + + IE+NTVD +QGR+K +I++S +SK
Sbjct: 1963 VGFVSPYKEQVRVLRQEITRSGIPASVSIEVNTVDGFQGREKDVIVFSCVRSSKRGGIGF 2022
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVII 92
L D +RL VAI+RA+ L ++G++ ++
Sbjct: 2023 LRDIRRLNVAITRARFCLYVVGNVNTLV 2050
>gi|448391013|ref|ZP_21566409.1| hypothetical protein C477_09334 [Haloterrigena salina JCM 13891]
gi|445666402|gb|ELZ19066.1| hypothetical protein C477_09334 [Haloterrigena salina JCM 13891]
Length = 274
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ IGVIA +R Q S + + + ++ ++TVD++QG + +I+ S T T + E I
Sbjct: 174 AGLERTDIGVIAPFRAQGSEISKHVPDEVAVDTVDRFQGSSQEVIIVSFTATG-ALEGPI 232
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++R K L+++GD
Sbjct: 233 FEDYRRINVALTRPKRALVLVGD 255
>gi|46135987|ref|XP_389685.1| hypothetical protein FG09509.1 [Gibberella zeae PH-1]
Length = 1562
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L GIP IGV+ YR Q+ +LK L +E++T D++QGRDK +I+ S ++++
Sbjct: 1373 LTIGIPDTEIGVMTHYRAQLFMLKDRLKAFSGVEMHTTDRFQGRDKEVIVLSLVRSNEAC 1432
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1433 NIGDLLKDWRRINVAFTRAKTKLLVVG 1459
>gi|423331731|ref|ZP_17309515.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
gi|409229572|gb|EKN22444.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
Length = 640
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
S ++ D +G+I+ Y+ QV LK+++ K ++I+TVD +QG++K I+ S T +SK
Sbjct: 1242 FSSMAAKAYDTVGIISPYKGQVGQLKKVI-KGMDISTVDGFQGQEKDCIIIS---TVRSK 1297
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ LND +R+ VA++RA++ +II+G + ++
Sbjct: 1298 KIGFLNDIRRMNVALTRARYTVIIVGSMSLL 1328
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 6 GIPTDHIGVIATYRNQ----------VSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTC 55
G+ D IGVI Y Q L+ + + +E+ +VD +QGR+K +I+ S
Sbjct: 727 GLDPDQIGVITPYEGQRAYVVHHMASAGALRADVYERVEVASVDSFQGREKDVIILSCVR 786
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ L+ILG +V+
Sbjct: 787 SNEHQGIGFLNDPRRLNVALTRAKYGLVILGAARVL 822
>gi|448618409|ref|ZP_21666646.1| DNA helicase [Haloferax mediterranei ATCC 33500]
gi|445746780|gb|ELZ98238.1| DNA helicase [Haloferax mediterranei ATCC 33500]
Length = 884
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + +
Sbjct: 786 AGVDADDIGVIAPFRAQVAEISR--RTDVTVDTVDRFQGSSKEVIIVSFVATG-DLDGPL 842
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 843 FEDHRRINVALTRAKKALCLVGD 865
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSSTC 55
G+ + IGVI Y Q ++ L KD IEI +VD +QGR+K I++S+
Sbjct: 727 GVSPEQIGVITPYIAQKQAIRVRLTKDTELGVNVMNAIEIASVDSFQGREKDFIIFSTVR 786
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + E L + +RL V+I+RAK+ L+++G+
Sbjct: 787 SNSTNEIGFLKNPQRLNVSITRAKYGLVVVGN 818
>gi|389848202|ref|YP_006350441.1| DNA helicase [Haloferax mediterranei ATCC 33500]
gi|388245508|gb|AFK20454.1| DNA helicase [Haloferax mediterranei ATCC 33500]
Length = 908
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + +
Sbjct: 810 AGVDADDIGVIAPFRAQVAEISR--RTDVTVDTVDRFQGSSKEVIIVSFVATG-DLDGPL 866
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 867 FEDHRRINVALTRAKKALCLVGD 889
>gi|298715587|emb|CBJ28140.1| hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus]
Length = 1244
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GVI+ Y Q+ +LK ++ +EI+TVD +QGR+K +I+ S+ + S+
Sbjct: 660 VGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIG 719
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +R+ VA++RA+H L ++G + +
Sbjct: 720 FLADVRRMNVALTRARHGLFVVGSAEAL 747
>gi|150007774|ref|YP_001302517.1| helicase [Parabacteroides distasonis ATCC 8503]
gi|149936198|gb|ABR42895.1| putative helicase [Parabacteroides distasonis ATCC 8503]
Length = 640
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|303389379|ref|XP_003072922.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302065|gb|ADM11562.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 563
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S++ + + +G+IA Y +QV LL+ ++D +E++TVD +QG+++ I+ + + E
Sbjct: 443 SIVETLQGEEVGIIAPYTSQVLLLRDMVD--VEVSTVDGFQGQERDYIIITLVRCNDRDE 500
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L++ KRL VA++R K L+++GD
Sbjct: 501 FGFLDNEKRLNVALTRCKKGLVVIGD 526
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IPT+ VI Y QV L+R+ ++ DIE+NTVD +QGR+ I+ S ++K
Sbjct: 545 IPTN---VITPYDAQVRYLRRMFEEHNIDIEVNTVDGFQGRENEAIVISFV---RTKNFG 598
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK KLI++G+
Sbjct: 599 FLRDLRRLNVAITRAKRKLILIGN 622
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 756 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 815
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 816 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 852
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 761 AGVKPSEIGVITPYEGQRSYIVTTMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCV 820
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 821 RSNENQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 857
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 761 AGVKPSEIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCV 820
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 821 RSNENQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 857
>gi|298375719|ref|ZP_06985676.1| DNA helicase [Bacteroides sp. 3_1_19]
gi|298268219|gb|EFI09875.1| DNA helicase [Bacteroides sp. 3_1_19]
Length = 640
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ +D I ++TVD +QG+++ +IL S ++ +
Sbjct: 523 GLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILGD
Sbjct: 583 FLNDLRRMNVAITRARMKLMILGD 606
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IG+I TY+ Q++ LKR ++IE NT D +QGR++ II++S +
Sbjct: 1734 IGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIG 1793
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ V ++RAK L +LGD
Sbjct: 1794 FLNDIRRMNVGLTRAKSSLWVLGD 1817
>gi|448602305|ref|ZP_21656361.1| ATP-dependent DNA helicase Dna2 [Haloferax sulfurifontis ATCC
BAA-897]
gi|445747820|gb|ELZ99274.1| ATP-dependent DNA helicase Dna2 [Haloferax sulfurifontis ATCC
BAA-897]
Length = 884
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ TD IGVIA +R QV+ + R D ++TVD++QG K +I+ S T + + +
Sbjct: 787 GVDTDDIGVIAPFRAQVAEISR--RTDATVDTVDRFQGSSKEVIVVSFVATGEL-DGPLF 843
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 844 EDHRRINVALTRAKKALCLVGD 865
>gi|63054946|gb|AAY29011.1| dna2-nam7 helicase family protein [Pyrococcus sp. 321]
Length = 179
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + ++IE+ TVD YQGR+K +I+ S ++++ E
Sbjct: 102 LEAGVKPEWIGVITPYDDQRDLISMSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEI 161
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAK 178
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ L K +E+ +VD +QGR+K I+ S
Sbjct: 759 AGVKPAEIGVITPYEGQRSYIVTTMQNSGTSKKDLYKGVEVASVDAFQGREKDFIVLSCV 818
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 819 RSNENQGIGFLSDPRRLNVALTRAKYGLVILGNPRVL 855
>gi|213407736|ref|XP_002174639.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
gi|212002686|gb|EEB08346.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
Length = 655
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ I +I Y Q +LL+ LL + IE+ ++D QGR+K I++S ++ +E
Sbjct: 537 AGLNPSEIAIITPYNAQATLLRNLLHERNLAIEVGSIDSVQGREKEAIIFSLVRSNDERE 596
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++++RL VAI+RAK L ++GD +
Sbjct: 597 IGFMSEKRRLNVAITRAKRHLCVVGDAMTV 626
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++ +N
Sbjct: 720 IEENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVN 779
Query: 67 DRKRLTVAISRAKHKLIILGDLQVIIA 93
D KRL VA+ RAK LII+G++Q +I
Sbjct: 780 DYKRLNVALKRAKSGLIIIGNIQTLIT 806
>gi|384495805|gb|EIE86296.1| hypothetical protein RO3G_11007 [Rhizopus delemar RA 99-880]
Length = 936
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSK 58
+P + +GVI+ Y+ Q L LD K ++I+TVD +QG +K++I+ S+ TS
Sbjct: 829 VPPNDLGVISLYKEQADRLSDRLDAMGNNSLTKSVQISTVDAFQGGEKNVIILSTVRTS- 887
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVII 92
ES +++ R+ VA++RAK LIILG+ +++
Sbjct: 888 --ESAFMHNEPRINVALTRAKRHLIILGNRNLLL 919
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----VSLLKRL------LDKDIEINTVDQYQGRDKSIILYS 52
L +G+ IGVI Y Q VS++ R L K+IE+++VD +QGR+K II+ S
Sbjct: 662 LQNGMSPAQIGVITPYEGQRAHVVSVMVRNGTARQDLYKEIEVSSVDAFQGREKDIIVLS 721
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ L+D +RL VA++RA+ L++LG+ +V+
Sbjct: 722 CVRSNEHSSIGFLSDPRRLNVALTRARFGLVVLGNPRVL 760
>gi|70922055|ref|XP_734255.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506824|emb|CAH86868.1| hypothetical protein PC302200.00.0 [Plasmodium chabaudi chabaudi]
Length = 128
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
M+++ I D+I Y N+ K IEI+TVD +QGR+K I+++S C++ K
Sbjct: 9 MNILRNIFYDNIFNNKNYINEY--------KKIEISTVDSFQGREKEIVIFSLVCSNYFK 60
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VAI+RAK ++I+G+
Sbjct: 61 NIGFLKDYRRLNVAITRAKRHIVIVGN 87
>gi|403215835|emb|CCK70333.1| hypothetical protein KNAG_0E00650 [Kazachstania naganishii CBS 8797]
Length = 1538
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 6 GIPTDHIGVIATYRNQVSLLK-RLLDKD---IEINTVDQYQGRDKSIILYSST-CTSKSK 60
G+ + +GV++ YR Q+ LLK +L D + +EI T DQ+QGRDK ++ S C +
Sbjct: 1410 GVSCEDVGVMSLYRAQLRLLKEKLADYENNGLEILTADQFQGRDKECVIISMVRCNDELN 1469
Query: 61 ESKILNDRKRLTVAISRAKHKLIILG 86
+L + +R+ VA++RAK KLII+G
Sbjct: 1470 GGSLLRELRRVNVAMTRAKSKLIIVG 1495
>gi|408389633|gb|EKJ69070.1| hypothetical protein FPSE_10739 [Fusarium pseudograminearum CS3096]
Length = 1488
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L GIP IGV+ YR Q+ +LK L +E++T D++QGRDK +I+ S ++++
Sbjct: 1299 LTIGIPDTEIGVMTHYRAQLFMLKDKLKAFSGVEMHTTDRFQGRDKEVIVLSLVRSNEAC 1358
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1359 NIGDLLKDWRRINVAFTRAKTKLLVVG 1385
>gi|354610755|ref|ZP_09028711.1| AAA ATPase [Halobacterium sp. DL1]
gi|353195575|gb|EHB61077.1| AAA ATPase [Halobacterium sp. DL1]
Length = 913
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ +GVIA +R QV+ + R + + ++TVD++QG K +I+ S T + + I
Sbjct: 812 AGLDPADVGVIAPFRAQVAEIGRHVPDGVSVDTVDRFQGSSKEVIVVSFVATG-TLDGPI 870
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 871 FEDHRRVNVALTRAKKSLVLVGD 893
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKS 59
L G+ + VI Y Q L+ L+ D+E++T+D +QGR+K +L S T ++
Sbjct: 517 LALGLSQRELAVITPYSAQAHRLRERLESFAPDVEVDTMDAFQGREKDAVLVSLTRSNSE 576
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
+ LND +R+ VA++RA+ L ++GD
Sbjct: 577 GQVGFLNDLRRMNVALTRARRHLFVVGD 604
>gi|430812162|emb|CCJ30384.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1431
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSST-CTSKSKE 61
L G+ I V++ YR+Q+ L I+I+TVD +QGRDK I+ S SK+K
Sbjct: 1283 LSQGVSESRIAVLSVYRSQIKL--------IQIDTVDSFQGRDKDCIIISFVRSNSKNKI 1334
Query: 62 SKILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA +RAK KLI G
Sbjct: 1335 EGLLRDWRRLNVAFTRAKSKLIFFG 1359
>gi|70952445|ref|XP_745390.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525698|emb|CAH78816.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 886
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD-------------KDIEINTVDQYQGRDKSIILYSST 54
P D I VI Y Q+++L+ + K IEI+TVD +QGR+K I+++S
Sbjct: 795 PND-ICVITPYSKQMNILRNIFYDNIFNNKNYINEYKKIEISTVDSFQGREKEIVIFSLV 853
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
C++ K L D +RL VAI+RAK ++I+G+
Sbjct: 854 CSNYFKNIGFLKDYRRLNVAITRAKRHIVIVGN 886
>gi|405973005|gb|EKC37745.1| Helicase sen1 [Crassostrea gigas]
Length = 294
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Query: 10 DHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKESK-- 63
H+G+IA Y++Q LL L K +IEI+TVD +QG++K +I++S C +S+
Sbjct: 168 QHVGIIAPYKSQKHLLSTSLAKKGVRNIEISTVDGFQGQEKEVIVFS--CVRAQNQSRSI 225
Query: 64 -ILNDRKRLTVAISRAKHKLIILGDL 88
+ D+KR+ VA++RAK L I+ +
Sbjct: 226 GFMADKKRMNVALTRAKSALYIVAHM 251
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 750 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 809
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 810 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 846
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 750 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 809
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 810 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 846
>gi|448534652|ref|ZP_21621810.1| DNA replication factor Dna2 [Halorubrum hochstenium ATCC 700873]
gi|445704263|gb|ELZ56180.1| DNA replication factor Dna2 [Halorubrum hochstenium ATCC 700873]
Length = 906
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + I D +
Sbjct: 813 DDIGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVIVVSLVATG-DLDGPIFEDHR 869
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK +L I+GD
Sbjct: 870 RVNVALTRAKKQLTIVGD 887
>gi|448437348|ref|ZP_21587374.1| DNA replication factor Dna2 [Halorubrum tebenquichense DSM 14210]
gi|445681285|gb|ELZ33720.1| DNA replication factor Dna2 [Halorubrum tebenquichense DSM 14210]
Length = 906
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRK 69
D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + I D +
Sbjct: 813 DDIGVIAPFRAQVAEIGR--RTDVTVDTVDRFQGSSKEVIVVSLVATG-DLDGPIFEDHR 869
Query: 70 RLTVAISRAKHKLIILGD 87
R+ VA++RAK +L I+GD
Sbjct: 870 RVNVALTRAKKQLTIVGD 887
>gi|342881437|gb|EGU82331.1| hypothetical protein FOXB_07160 [Fusarium oxysporum Fo5176]
Length = 1525
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
L G+P IGV+ YR Q+ +LK L +E++T D++QGRDK +I+ S ++++
Sbjct: 1336 LTVGVPDSEIGVMTHYRAQLFMLKDKLKMFSGVEMHTTDRFQGRDKEVIVLSLVRSNEAC 1395
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA +RAK KL+++G
Sbjct: 1396 NIGDLLKDWRRINVAFTRAKTKLLVVG 1422
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 21/101 (20%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IGVIA Y Q+ L+ L +DIEI TVD ++GR+KS+I+
Sbjct: 877 IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVII 936
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ ++ L D +RL V ++RAK LI+LG L+ +
Sbjct: 937 FSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 21/101 (20%)
Query: 12 IGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGRDKSIIL 50
IGVIA Y Q+ L+ L +DIEI TVD ++GR+KS+I+
Sbjct: 877 IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVII 936
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S+ ++ L D +RL V ++RAK LI+LG L+ +
Sbjct: 937 FSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|345567575|gb|EGX50505.1| hypothetical protein AOL_s00075g234 [Arthrobotrys oligospora ATCC
24927]
Length = 650
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSS 53
M +G+ I +I Y QV+LL L+ + IEI +VD +QGR+K IL S
Sbjct: 523 MEAEAGVQPKDIAIITPYNAQVALLSGLIKSEFPDAFSEIEIGSVDGFQGREKEAILLSL 582
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+++ KE L D +RL VA++R + L ++GD
Sbjct: 583 VRSNEKKEVGFLADERRLNVAMTRPRRHLCVIGD 616
>gi|63054960|gb|AAY29018.1| dna2-nam7 helicase family protein [Pyrococcus sp. MV4]
Length = 179
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 101 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSLVRSNKKAEI 160
Query: 63 KILNDRKRLTVAISRAKH 80
+L D +RL V+++RAK
Sbjct: 161 GVLKDLRRLNVSLTRAKR 178
>gi|390605116|gb|EIN14507.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 778
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI D I ++ Y+ QV LL +L D+EI ++D QGR+K ++ + ++ +
Sbjct: 663 AGILPDQIAIVTPYQAQVQLLTSVLRPTFGSDLEIGSIDGMQGREKEAVIITLVRSNSKR 722
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD 87
E L +++RL VA++RAK L ++GD
Sbjct: 723 EVGFLKEKRRLNVAMTRAKRHLCVVGD 749
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 12/88 (13%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIE------------INTVDQYQGRDKSIILYSSTCTSKS 59
IG+IA Y QV LL+ L+ + E I+TVD +QG+++ ++L S T +++
Sbjct: 524 IGLIAPYGAQVRLLRSLIFEGFEYPNLKAFSDLITIDTVDGFQGQERDLMLISLTRSNEK 583
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGD 87
E L D +R+ VA++RAK KL+++GD
Sbjct: 584 GEIGFLADERRMNVALTRAKRKLVLVGD 611
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 755 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 814
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 815 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 851
>gi|145348783|ref|XP_001418823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579053|gb|ABO97116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 609
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD-----IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+ D IGVI Y QV++L+ L +D +E++TVD +QGR+K I+ S+ ++ S E
Sbjct: 495 VAVDDIGVITPYNGQVTVLRELRARDDALKNLEVSTVDGFQGREKEAIIISAVRSNASGE 554
Query: 62 SKILNDRKRLTVAISRA-KHKLIIL 85
L+D +R+ VA++RA KH +I+
Sbjct: 555 VGFLSDSRRMNVAVTRARKHCCLII 579
>gi|402220987|gb|EJU01057.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
+++G+ I VI Y+ QV+ L LL D +EI TVD QGR+K ++ S ++
Sbjct: 648 VMAGVAPGQIAVITPYQAQVTYLTSLLRADMPDLEIGTVDGMQGREKEAVVLSLVRSNDK 707
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+E L +++RL VA++R + L ++GD + +
Sbjct: 708 REVGFLREKRRLNVAMTRPRRHLCVVGDSETV 739
>gi|396081428|gb|AFN83045.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 571
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S++ + + +G+IA Y +QV LL+ ++D +E++TVD +QG+++ I+ + + K+
Sbjct: 436 SIVEILKGEEVGIIAPYTSQVLLLREMVD--VEVSTVDGFQGQERDYIIITLVRCNDRKD 493
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L++ KRL VA++R K L+++GD
Sbjct: 494 FGFLSNEKRLNVALTRCKKGLVVVGD 519
>gi|63054944|gb|AAY29010.1| dna2-nam7 helicase family protein [Pyrococcus sp. 312]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + ++IE+ TVD YQGR+K +I+ S ++++ E
Sbjct: 102 LEAGVKPEWIGVITPYDDQRDLISMSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAVEI 161
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAKK 179
>gi|343425911|emb|CBQ69444.1| related to DNA2-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1427
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYS------ 52
L +G I V+ YR Q+ L++ L+ +E+ T DQ QGRDK +I+ +
Sbjct: 1304 LAAGCTAGQIAVVTPYRQQLKLVRSLMHAGEMDQVELLTADQSQGRDKDVIVVTFTRANV 1363
Query: 53 ---STCTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
ST + + ++LND +RL VA++RAK KL+++G
Sbjct: 1364 DAASTECAGASTGELLNDVRRLNVALTRAKRKLVLVG 1400
>gi|340504056|gb|EGR30545.1| hypothetical protein IMG5_129630 [Ichthyophthirius multifiliis]
Length = 801
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 14/93 (15%)
Query: 11 HIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYSSTCTS------ 57
+G+I Y +QVS ++R + + +E++TVD +QGR+K II++S+ S
Sbjct: 662 QLGIITPYSSQVSEIRRKIKQFDGTDKCLVEVHTVDGFQGREKDIIIFSTVRASIQNGVK 721
Query: 58 -KSKESKILNDRKRLTVAISRAKHKLIILGDLQ 89
K LND++R+ V++SRA+ LI++GDL+
Sbjct: 722 NNKKTIGFLNDKRRMNVSLSRARLSLIVVGDLK 754
>gi|238892813|ref|YP_002917547.1| hypothetical protein KP1_0623 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402782684|ref|YP_006638230.1| helicase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|238545129|dbj|BAH61480.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402543533|gb|AFQ67682.1| putative helicase [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 1651
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKS 59
T IGVI YR QV LL+ L+ + I+++T+D YQG + IIL S +
Sbjct: 1511 TPAIGVITGYRKQVELLQMRLESESWAAPIRSMIKVDTIDSYQGSENRIILLSLVRHNSE 1570
Query: 60 KESKILNDRKRLTVAISRAKHKLIILG 86
++ + D R+ VA+SRAK +L+I+G
Sbjct: 1571 QKGGFMTDNARVNVALSRAKERLLIIG 1597
>gi|393216574|gb|EJD02064.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 776
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+GI I +I Y+ QVS + LL + +EI TVD QGR+K I+ S ++ +
Sbjct: 657 AGIYPSQIAIITPYQAQVSHISALLSDEYKDELEIGTVDGMQGREKEAIIISLVRSNDKR 716
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGD----------LQVIIAIVNCPNTGRYGNLGQIP 110
E L D++RL VA++RA+ L ++GD L+ +A + YG L Q+P
Sbjct: 717 EVGFLKDKRRLNVAMTRARRHLCVIGDSSTVQHGGKFLKAWMAWLENNAEVYYGGLEQLP 776
>gi|198277109|ref|ZP_03209640.1| hypothetical protein BACPLE_03317 [Bacteroides plebeius DSM 17135]
gi|198269607|gb|EDY93877.1| hypothetical protein BACPLE_03317 [Bacteroides plebeius DSM 17135]
Length = 1415
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 18/103 (17%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTCTSKS- 59
P +GVI YRNQ++++++ + + DI I+TV++YQG + II+YS T + S
Sbjct: 1002 PNRTVGVIVPYRNQIAMIRKEIARLQLSALQDISIDTVERYQGSQRDIIIYSFTIQNFSQ 1061
Query: 60 ---------KESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+E L DRK L VA++RA+ +L++ G+ ++ A
Sbjct: 1062 LNFLTANTFQEGNFLIDRK-LNVALTRARKQLLLTGNPHILGA 1103
>gi|63054970|gb|AAY29023.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB83]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 102 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 161
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAKR 179
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q S + + + ++E+ VD +QGR+K II+ +
Sbjct: 766 LKAGLKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVT 825
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK LII+G+ +V+
Sbjct: 826 CVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVL 864
>gi|63054968|gb|AAY29022.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB82]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 102 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 161
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAKR 179
>gi|57834047|emb|CAE05419.2| OSJNBa0035I04.7 [Oryza sativa Japonica Group]
Length = 744
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 561 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 618
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 619 EQKIGFVSDFRRMNVAITRARSAVLVVG 646
>gi|297605680|ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa Japonica Group]
Length = 1029
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 658 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 715
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 716 EQKIGFVSDFRRMNVAITRARSAVLVVG 743
>gi|297723147|ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa Japonica Group]
Length = 836
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 628 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 685
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 686 EQKIGFVSDFRRMNVAITRARSAVLVVG 713
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 665 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 722
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 723 EQKIGFVSDFRRMNVAITRARSAVLVVG 750
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 797 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 854
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 855 EQKIGFVSDFRRMNVAITRARSAVLVVG 882
>gi|125548313|gb|EAY94135.1| hypothetical protein OsI_15908 [Oryza sativa Indica Group]
Length = 716
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 533 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 590
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 591 EQKIGFVSDFRRMNVAITRARSAVLVVG 618
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 605 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 662
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 663 EQKIGFVSDFRRMNVAITRARSAVLVVG 690
>gi|157134269|ref|XP_001663217.1| hypothetical protein AaeL_AAEL013025 [Aedes aegypti]
gi|108870541|gb|EAT34766.1| AAEL013025-PA [Aedes aegypti]
Length = 877
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+ + IGVI+ Y QV +K L+ + +E+ + +QYQGR+K IIL ST S
Sbjct: 748 VAENDIGVISPYTKQVHHIKGLVKDNNWDKVEVGSTEQYQGREKPIILI-STVRSGLSTV 806
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LN+ KRL VAI+RA+ +II+G+
Sbjct: 807 GFLNNEKRLNVAITRARALMIIVGN 831
>gi|32490215|emb|CAE05958.1| OSJNBb0088C09.17 [Oryza sativa Japonica Group]
gi|116309413|emb|CAH66489.1| OSIGBa0076I14.10 [Oryza sativa Indica Group]
Length = 770
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSK 60
+ + VI+ YR+QV LLK I++NTVD +QGR+K ++++S C +K
Sbjct: 587 SSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFS--CVRCNK 644
Query: 61 ESKI--LNDRKRLTVAISRAKHKLIILG 86
E KI ++D +R+ VAI+RA+ ++++G
Sbjct: 645 EQKIGFVSDFRRMNVAITRARSAVLVVG 672
>gi|63054978|gb|AAY29027.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB112]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 102 LESGVKAEMMGVITPYYDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 161
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAKK 179
>gi|448460383|ref|ZP_21597208.1| DNA replication factor Dna2 [Halorubrum lipolyticum DSM 21995]
gi|445807124|gb|EMA57210.1| DNA replication factor Dna2 [Halorubrum lipolyticum DSM 21995]
Length = 910
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R + ++TVD++QG K +I+ S T + I
Sbjct: 812 AGVDPDDIGVIAPFRAQVAEIGR--RTSVTVDTVDRFQGSSKEVIVVSLVATG-DLDGPI 868
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L ++GD
Sbjct: 869 FEDHRRMNVALTRAKKQLTLVGD 891
>gi|170030076|ref|XP_001842916.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865922|gb|EDS29305.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 12 IGVIATYRNQVSLLKRLL-DKD---IEINTVDQYQGRDKSIILYSSTCTSKSKESKILND 67
IGVI Y +QV +K LL D D +E+ + +QYQGR+K I++ S S+S + LN+
Sbjct: 526 IGVITPYASQVRHIKELLEDHDLDGVEVGSTEQYQGREKPIMIMS-MVRSRSNSAGFLNN 584
Query: 68 RKRLTVAISRAKHKLIILGDLQVIIAI 94
KR+ V+++RA+ +I++GD + + I
Sbjct: 585 AKRINVSLTRAQALMIVVGDPETLEKI 611
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 749 AGVLPSQIGIITPYEGQRSYIVSSMQTNGALRKELYKEIEVASVDAFQGREKDYIVLSCV 808
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + LND +RL VA++RAK ++ILG+ +V+
Sbjct: 809 RSNDHQGIGFLNDPRRLNVALTRAKFGVVILGNPKVL 845
>gi|448611940|ref|ZP_21662370.1| DNA helicase [Haloferax mucosum ATCC BAA-1512]
gi|445742701|gb|ELZ94195.1| DNA helicase [Haloferax mucosum ATCC BAA-1512]
Length = 884
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + +
Sbjct: 786 AGVDADDIGVIAPFRAQVAEISR--RTDVTVDTVDRFQGSSKEVIVVSFVATG-DLDGPL 842
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 843 FEDHRRINVALTRAKKALCLVGD 865
>gi|402219553|gb|EJT99626.1| Dna2-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 1251
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKE-SKI 64
P D IG+++ YR Q+ L+ LL +EI T D+ QGRDK IL S ++++ E ++
Sbjct: 1078 PMD-IGILSLYRQQIKLISHLLRSAPGVEILTADRSQGRDKECILISMVRSNETGELGEL 1136
Query: 65 LNDRKRLTVAISRAKHKLIILG 86
L D +RL V+ +RA+ KL+I+G
Sbjct: 1137 LKDWRRLNVSFTRARSKLVIVG 1158
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 28/120 (23%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD---------------------KDIEINTVDQYQGR 44
G+ IG+I+ Y QV +L ++L +D+EI TVD ++GR
Sbjct: 667 GLRGRDIGIISPYVAQVRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVDGFEGR 726
Query: 45 DKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYG 104
+K II++S+ + L DR+R+ VA++RAK L ++G + + + GR+G
Sbjct: 727 EKEIIIFSTVRNNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTL-------SKGRHG 779
>gi|366992642|ref|XP_003676086.1| hypothetical protein NCAS_0D01420 [Naumovozyma castellii CBS 4309]
gi|342301952|emb|CCC69723.1| hypothetical protein NCAS_0D01420 [Naumovozyma castellii CBS 4309]
Length = 1301
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYSST-CTS 57
L G+ +++IGV+ YR Q+ LL++ + + +EI T DQ+QGRDK I+ S S
Sbjct: 1136 LQCGVSSENIGVMTLYRAQLRLLQKTFNSMYFQGLEILTADQFQGRDKDCIIISMVRSNS 1195
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
+ +L + +R+ VA++RAK KLII+G + I I
Sbjct: 1196 QLNGGSLLKELRRVNVAMTRAKSKLIIVGSKKTICNI 1232
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L +G+ + IG+I Y Q S + + + ++E+ VD +QGR+K II+ +
Sbjct: 746 LKAGLRPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVT 805
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +++
Sbjct: 806 CVRSNEHQGIGFLNDSRRLNVALTRAKYGVIIIGNAKIL 844
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 734 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 793
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 794 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 830
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 734 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 793
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 794 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 830
>gi|63054938|gb|AAY29007.1| dna2-nam7 helicase family protein [Pyrococcus sp. 121]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + ++IE+ TVD YQGR+K +I+ S ++++ E
Sbjct: 102 LEAGVKPEWIGVITPYDDQRDLISLSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEI 161
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAK 178
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ L K+IE+ +VD +QGR+K I+ S
Sbjct: 751 AGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCV 810
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 811 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 847
>gi|336364173|gb|EGN92535.1| hypothetical protein SERLA73DRAFT_99065 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1660
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
I V++ Y Q+ +LK LL + +T+D +QGR+ I+++S+ + S E + D +RL
Sbjct: 1558 IAVLSPYTRQIEMLKSLLPSTVACHTIDSFQGRESDIVIFSTVRCNVSGEIGFVEDARRL 1617
Query: 72 TVAISRAKHKLIILGDLQVI 91
V +RA+ LII+GD + +
Sbjct: 1618 NVMWTRARLGLIIIGDRETM 1637
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV +++L+ K+ I INTVD +QG+++ +I S +++
Sbjct: 523 GLISPYKAQVRYIRQLMRKNPFFKPFSRLISINTVDGFQGQERDVIFISLVRANEAGNIG 582
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VAI+RA+ KLI+LGD
Sbjct: 583 FLQDLRRMNVAITRARMKLILLGD 606
>gi|164661533|ref|XP_001731889.1| hypothetical protein MGL_1157 [Malassezia globosa CBS 7966]
gi|159105790|gb|EDP44675.1| hypothetical protein MGL_1157 [Malassezia globosa CBS 7966]
Length = 721
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
GI + I V++ Y QV LL + + +E+ TVD QGR+K +++ S ++ +
Sbjct: 601 GIAPESIAVLSPYSAQVHLLSQQIRSAYGARVEVGTVDGMQGREKEVVIVSLVRSNDEHQ 660
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RAK +L+I+GD +
Sbjct: 661 IGFLQDSRRLNVAMTRAKRQLVIVGDADTV 690
>gi|451998180|gb|EMD90645.1| hypothetical protein COCHEDRAFT_1140294 [Cochliobolus
heterostrophus C5]
Length = 709
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ + I V+ Y Q++LL +L ++ +E+ +VD +QGR+K +++S+ ++ E
Sbjct: 589 AGVRPEDIAVVTPYNAQLALLAGMLKEEYPGMELGSVDGFQGREKEAVIFSTVRSNAEHE 648
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L ++GD + I
Sbjct: 649 VGFLGEKRRLNVAMTRPKRHLCVIGDSETI 678
>gi|63054966|gb|AAY29021.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB81]
gi|63054980|gb|AAY29028.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB113]
Length = 179
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 102 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 161
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAKK 179
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L S + + IG+I Y Q + L + L ++IE+ +VD +QGR+K I+ S
Sbjct: 764 LRSNVKPEQIGIITPYEGQRAYIVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIILS 823
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + LND +RL VA++RAK+ +II+G+ +V+
Sbjct: 824 CVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVL 862
>gi|134114680|ref|XP_774048.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256678|gb|EAL19401.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 748
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 3 LIS-GIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSK 58
LIS GIP IG++ Y+ QV+L+ LL ++ + I +VD QG+++ I+ S ++
Sbjct: 628 LISLGIPPIEIGIVTPYQAQVTLISSLLHEEYPEMTIGSVDGLQGQEREAIILSLVRSNP 687
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S E L + +RL VA++RAK +L ++GD + +
Sbjct: 688 SGEVGFLGEYRRLNVAMTRAKRQLCVVGDSKTV 720
>gi|63054972|gb|AAY29024.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB85]
gi|63054976|gb|AAY29026.1| dna2-nam7 helicase family protein [Pyrococcus sp. VB93]
Length = 179
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L SG+ + +GVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K+ E
Sbjct: 102 LESGVKAEMMGVITPYDDQRDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEI 161
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAK 178
>gi|448565322|ref|ZP_21636189.1| ATP-dependent DNA helicase Dna2 [Haloferax prahovense DSM 18310]
gi|445715066|gb|ELZ66822.1| ATP-dependent DNA helicase Dna2 [Haloferax prahovense DSM 18310]
Length = 884
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ TD IGVIA +R QV+ + R D ++TVD++QG K +I+ S T + +
Sbjct: 787 GVDTDDIGVIAPFRAQVAEISR--RTDATVDTVDRFQGSSKEVIVVSFVATG-DLDGPLF 843
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 844 EDHRRINVALTRAKKALCLVGD 865
>gi|58271134|ref|XP_572723.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57228982|gb|AAW45416.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 748
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 3 LIS-GIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSK 58
LIS GIP IG++ Y+ QV+L+ LL ++ + I +VD QG+++ I+ S ++
Sbjct: 628 LISLGIPPIEIGIVTPYQAQVTLISSLLHEEYPEMTIGSVDGLQGQEREAIILSLVRSNP 687
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
S E L + +RL VA++RAK +L ++GD + +
Sbjct: 688 SGEVGFLGEYRRLNVAMTRAKRQLCVVGDSKTV 720
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+GI D IG+I Y Q + + +R + +E+ +VD +QGR+K I+ S T
Sbjct: 901 AGITPDQIGIITPYEGQRAHIVQYMNFHGAARRSFYEALEVASVDSFQGREKDYIILSCT 960
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RAK+ LI++G+
Sbjct: 961 RSNDHQGIGFLNDPRRLNVALTRAKYGLILVGN 993
>gi|224010575|ref|XP_002294245.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
gi|220970262|gb|EED88600.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
Length = 608
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+ VI Y Q +LL RL ++ +EI+TVD +QGR+ +++YS + SK
Sbjct: 438 VAVITPYSQQTALLHRLFEEQFGNAYSSRVEISTVDAFQGREAGLVIYSCVRAAGSKGIG 497
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L+D +R+ VA++RAK+ L ++ + I+
Sbjct: 498 FLSDVQRMNVALTRAKYFLFVIARCRSIM 526
>gi|238918330|ref|YP_002931844.1| Nuclease-related domain protein [Edwardsiella ictaluri 93-146]
gi|238867898|gb|ACR67609.1| Nuclease-related domain protein [Edwardsiella ictaluri 93-146]
Length = 1653
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKS 59
T IG+I YR QV LL++ L+ + ++++T+D YQG + IIL S +
Sbjct: 1513 TPAIGIITGYRKQVELLQKRLESESWAAPIRSMMKVDTIDSYQGSENRIILLSLVRHNAE 1572
Query: 60 KESKILNDRKRLTVAISRAKHKLIILG 86
++ + D R+ VA+SRAK +L+I+G
Sbjct: 1573 QKGGFMTDNARVNVALSRAKERLLIIG 1599
>gi|298715439|emb|CBJ28050.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1242
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
L +G+ + VI+ Y QV+LLKRLL + +E+ +VD +QG +K I+ S ++
Sbjct: 644 LNAGVRESEVAVISPYNGQVNLLKRLLRPEHPGVEVRSVDGFQGGEKEAIVLSLVRSNAG 703
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQ 89
K+ L D +RL VA++RAK + I+ D +
Sbjct: 704 KKVGFLADARRLNVAVTRAKRHVAIVCDAE 733
>gi|156364929|ref|XP_001626596.1| predicted protein [Nematostella vectensis]
gi|156213478|gb|EDO34496.1| predicted protein [Nematostella vectensis]
Length = 559
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 61/91 (67%), Gaps = 11/91 (12%)
Query: 12 IGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCTSKS-----KES 62
IGVI+ YR QVS +++LL K+ I++ +V+++QG ++ +I+ S+ +S+ +
Sbjct: 394 IGVISPYRQQVSKIRQLLHKNNITGIKVGSVEEFQGDERRVIIISTVRSSQEFLKMDAQF 453
Query: 63 KI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
K+ LN+RKR VAI+RA+ LI++G+ V+
Sbjct: 454 KLGFLNNRKRFNVAITRAQALLIVVGNPHVL 484
>gi|336464056|gb|EGO52296.1| hypothetical protein NEUTE1DRAFT_118717, partial [Neurospora
tetrasperma FGSC 2508]
Length = 136
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+G+ D I V+ Y Q+S+L L D+ IE+ +VD +QGR+K ++ S ++ E
Sbjct: 16 AGVRPDDIAVVTPYNAQLSILAPLKDEFPGIELGSVDGFQGREKEAVIVSLVRSNDEGEV 75
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L ++GD + +
Sbjct: 76 GFLGEKRRLNVAMTRPKRSLTVIGDSETV 104
>gi|350633858|gb|EHA22222.1| DNA helicase [Aspergillus niger ATCC 1015]
Length = 721
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+GI + I VI Y Q+++L ++L + IE+ +VD +QGR+K ++ S ++ E
Sbjct: 603 AGIHPEDIAVITPYNGQLAVLSQMLREKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHE 662
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +R+RL VA++R K L I GD + I
Sbjct: 663 VGFLGERRRLNVAMTRPKRHLCICGDSETI 692
>gi|63054962|gb|AAY29019.1| dna2-nam7 helicase family protein [Pyrococcus sp. MV7]
Length = 178
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 101 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEI 160
Query: 63 KILNDRKRLTVAISRAKH 80
L D +RL V+++RAK
Sbjct: 161 GFLKDLRRLNVSLTRAKR 178
>gi|63054956|gb|AAY29016.1| dna2-nam7 helicase family protein [Pyrococcus sp. MZ4]
Length = 178
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 101 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEI 160
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 161 GFLKDLRRLNVSLTRAK 177
>gi|63054954|gb|AAY29015.1| dna2-nam7 helicase family protein [Pyrococcus sp. JT1]
Length = 178
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 101 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEI 160
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 161 GFLKDLRRLNVSLTRAK 177
>gi|448465899|ref|ZP_21598947.1| DNA replication factor Dna2 [Halorubrum kocurii JCM 14978]
gi|445814837|gb|EMA64794.1| DNA replication factor Dna2 [Halorubrum kocurii JCM 14978]
Length = 898
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ D +GVIA +R QV+ + R + ++TVD++QG K +I+ S T +
Sbjct: 798 LAAGVDPDDVGVIAPFRAQVAEIGR--RTAVTVDTVDRFQGSSKEVIVVSLVATG-DLDG 854
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
I D +R+ VA++RAK +L ++GD
Sbjct: 855 PIFEDHRRMNVALTRAKKQLTLVGD 879
>gi|401882568|gb|EJT46821.1| DNA replication helicase dna2 [Trichosporon asahii var. asahii CBS
2479]
Length = 1351
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
SGI I +I YR Q+ L+ RL+ D+E+ T D+ QGRDK ++L S ++ +
Sbjct: 1178 SGIRQHDIALITPYRQQIKLISRLMAGAGLGDVEVLTADKAQGRDKDVVLVSLVRSNDTG 1237
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L D +R+ V+ +RAK KL++ G + +
Sbjct: 1238 SVGELLRDWRRINVSFTRAKKKLVVFGSQKTL 1269
>gi|320166766|gb|EFW43665.1| MAA3 [Capsaspora owczarzaki ATCC 30864]
Length = 2435
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD-------KDIEINTVDQYQGRDKSIILYSSTC 55
+ G IGV++ Y +QV L+++ +D K IE++TVD +QGR+K I+L+S
Sbjct: 1899 MFEGTQPVSIGVLSPYSDQVGLIRKKIDQKLPHMQKFIEVDTVDAFQGREKDIVLFSCVF 1958
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILG 86
T + L D +R+ VA++RA+ L ++G
Sbjct: 1959 TDR---IGFLADTRRMNVALTRARKCLFVIG 1986
>gi|406700631|gb|EKD03796.1| DNA replication helicase dna2 [Trichosporon asahii var. asahii CBS
8904]
Length = 1351
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSK 60
SGI I +I YR Q+ L+ RL+ D+E+ T D+ QGRDK ++L S ++ +
Sbjct: 1178 SGIRQHDIALITPYRQQIKLISRLMAGAGLGDVEVLTADKAQGRDKDVVLVSLVRSNDTG 1237
Query: 61 E-SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++L D +R+ V+ +RAK KL++ G + +
Sbjct: 1238 SVGELLRDWRRINVSFTRAKKKLVVFGSQKTL 1269
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ + IG+I Y Q S + ++ + K++E+ +VD +QGR+K I+ S
Sbjct: 747 AGVKPESIGIITPYEGQRSYVVQSMQQTGTFRKEIYKEVEVASVDAFQGREKDFIVLSCV 806
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 807 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 843
>gi|255939099|ref|XP_002560319.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584941|emb|CAP82980.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 716
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+GI + I VI Y Q++LL R+L + +E+ +VD +QGR+K ++ S ++ E
Sbjct: 598 AGIRPESIAVITPYNGQLALLSRMLREKYAGLELGSVDGFQGREKEAVVVSLVRSNAEHE 657
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L I GD + I
Sbjct: 658 VGFLGEKRRLNVAMTRPKRHLCICGDSETI 687
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 10 DHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYSSTCTSKS 59
+ IG+I Y Q + + + K+IE+ +VD +QGR+K IL S ++++
Sbjct: 880 EQIGIITPYEGQKAFITSYMQRSGQLDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEA 939
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +RL VA++RAK+ L+I G+ +V+
Sbjct: 940 SGIGFLNDPRRLNVALTRAKYGLVIFGNAKVL 971
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ + IG+I Y Q S LK+ L K +E+ +VD +QGR+K I+ S
Sbjct: 710 AGVTPEQIGIITPYDGQRSYIVQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCV 769
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA-------IVNCPNTG 101
+S+ + L++ +RL VA++RA++ +I+LG+ +V+ IV+C G
Sbjct: 770 RSSEHQGIGFLSEPRRLNVALTRARYGVIVLGNPKVLAKHALWYHFIVHCRERG 823
>gi|70947013|ref|XP_743163.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522529|emb|CAH74406.1| hypothetical protein PC000087.00.0 [Plasmodium chabaudi chabaudi]
Length = 99
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 31 KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
K IEI+TVD +QGR+K I+++S C++ K L D +RL VAI+RAK ++I+G+
Sbjct: 2 KKIEISTVDSFQGREKEIVIFSLVCSNYFKNIGFLKDYRRLNVAITRAKRHIVIVGN 58
>gi|224023712|ref|ZP_03642078.1| hypothetical protein BACCOPRO_00428 [Bacteroides coprophilus DSM
18228]
gi|224016934|gb|EEF74946.1| hypothetical protein BACCOPRO_00428 [Bacteroides coprophilus DSM
18228]
Length = 1421
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 18/103 (17%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK-------DIEINTVDQYQGRDKSIILYSSTCTSKS- 59
P +GVI YRNQ++++++ + + +I I+TV++YQG + +I+YS T + S
Sbjct: 1007 PNRTVGVIVPYRNQIAMIRKEISRLHIPELLEISIDTVERYQGSQRDVIIYSFTIHNFSQ 1066
Query: 60 ---------KESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+E + L DRK L VAI+RA+ +L++ G+ ++ A
Sbjct: 1067 LNFLTANTFREGEFLIDRK-LNVAITRARKQLLLTGNPNILGA 1108
>gi|448622876|ref|ZP_21669525.1| ATP-dependent DNA helicase Dna2 [Haloferax denitrificans ATCC
35960]
gi|445753384|gb|EMA04801.1| ATP-dependent DNA helicase Dna2 [Haloferax denitrificans ATCC
35960]
Length = 884
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ TD IGVIA +R QV+ + R D ++TVD++QG K +I+ S T + + +
Sbjct: 787 GVDTDDIGVIAPFRAQVAEISR--RTDAIVDTVDRFQGSSKEVIVVSFVATGEL-DGPLF 843
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 844 EDHRRINVALTRAKKALCLVGD 865
>gi|63054964|gb|AAY29020.1| dna2-nam7 helicase family protein [Pyrococcus sp. AV5]
Length = 179
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + +++E+ TVD YQGR+K +I+ S ++K E
Sbjct: 102 LNAGVKPEWIGVITPYDDQRDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEI 161
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RAK
Sbjct: 162 GFLKDLRRLNVSLTRAK 178
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 12/85 (14%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+GVI+ YR+QV LLK I+++TVD +QGR+K I+++S C ++E K
Sbjct: 637 VGVISPYRHQVKLLKDSFRSTFGDQSKELIDVSTVDGFQGREKEIVIFS--CVRCNEEQK 694
Query: 64 I--LNDRKRLTVAISRAKHKLIILG 86
I ++D +R+ VAI+RAK ++++G
Sbjct: 695 IGFVSDFRRMNVAITRAKSAVLVVG 719
>gi|448730176|ref|ZP_21712486.1| DNA replication factor Dna2 [Halococcus saccharolyticus DSM 5350]
gi|445793907|gb|EMA44472.1| DNA replication factor Dna2 [Halococcus saccharolyticus DSM 5350]
Length = 930
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVIA +R Q + ++R L + ++TVD++QG K +I+ S T +S I
Sbjct: 832 AGVAREDIGVIAPFRAQAAAIRRELPA-VTVDTVDRFQGSAKEVIVVSFVATG-DLDSPI 889
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L+++GD
Sbjct: 890 FEDFRRVNVALTRAKKALVLVGD 912
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 15 IATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRLTVA 74
I Y ++ L++ L K+IE+ +VD +QGR+K I+ S +++ + LND +RL VA
Sbjct: 807 IVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 866
Query: 75 ISRAKHKLIILGDLQVI 91
++RA++ ++ILG+ +V+
Sbjct: 867 LTRARYGIVILGNPKVL 883
>gi|398411081|ref|XP_003856885.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
gi|339476770|gb|EGP91861.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
Length = 685
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYSSTCT 56
SLI +G+ + I +I Y Q++LL ++L KD IE+ +VD +QGR+K ++ S +
Sbjct: 562 SLIEAGVKAEDIAIITPYNGQLALLSQML-KDRYPGIELESVDGFQGREKEAVIVSLVRS 620
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ E L +++RL VA++R K L+++GD + I
Sbjct: 621 NPEHEVGFLAEKRRLNVAMTRPKRALVVIGDSETI 655
>gi|317037841|ref|XP_001402440.2| DNA helicase [Aspergillus niger CBS 513.88]
Length = 714
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+GI + I VI Y Q+++L ++L + IE+ +VD +QGR+K ++ S ++ E
Sbjct: 596 AGIHPEDIAVITPYNGQLAVLSQMLREKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHE 655
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +R+RL VA++R K L I GD + I
Sbjct: 656 VGFLGERRRLNVAMTRPKRHLCICGDSETI 685
>gi|344230553|gb|EGV62438.1| hypothetical protein CANTEDRAFT_115904 [Candida tenuis ATCC 10573]
Length = 305
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--------KD----IEINTVDQYQGRDKSIILYSS 53
G+ D IG+I Y Q S + R L KD IE+ +VD +QGR+K I+ S
Sbjct: 95 GVKGDQIGIITPYEGQQSFVTRYLATNATQTQYKDEYLSIEVASVDAFQGREKDFIILSC 154
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++++ L D +RL VA++RAK+ +I+LG+
Sbjct: 155 VRANEAQVIGFLRDPRRLNVALTRAKYGMIVLGN 188
>gi|403216944|emb|CCK71439.1| hypothetical protein KNAG_0H00230 [Kazachstania naganishii CBS
8797]
Length = 685
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 12 IGVIATYRNQVSLLK---RLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
IG+I+ Y QV+L+K R + IEI+TVD +QGR+K +I+ S ++ E L +
Sbjct: 572 IGIISPYSAQVTLIKGMIREMYPSIEISTVDGFQGREKEVIILSLVRSNDKFEVGFLQEN 631
Query: 69 KRLTVAISRAKHKLIILGDLQVI 91
+RL VA++R K +L ++G+++++
Sbjct: 632 RRLNVAMTRPKKQLCVVGNIEML 654
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ LL K ++EI +VD +QGR+K I+ S
Sbjct: 766 GIKPEQIGVITPYEGQRAYLVQFMSMNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSC 825
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ S+ L+D +RL VA++RAK+ L++LG+
Sbjct: 826 VRANDSQSIGFLSDPRRLNVALTRAKYGLLVLGN 859
>gi|392396283|ref|YP_006432884.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
gi|390527361|gb|AFM03091.1| DNA/RNA helicase, superfamily I [Flexibacter litoralis DSM 6794]
Length = 661
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GV++TY+ QV LL+ L+ K+ I I+TVD +QG+++ ++ S +++ E
Sbjct: 546 VGVLSTYKAQVYLLRDLIRKNEVLSNYSNQITIHTVDGFQGQEREVMYISLVRSNEKGEI 605
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R VAI+RAK +L++ GD
Sbjct: 606 GFLKDFRRFNVAITRAKKRLVVFGD 630
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKR--------LLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
+G+I+ Y+ QV+ +KR ++ +I+ NTVD +QG++K II+ S S+S
Sbjct: 1731 VGIISPYKEQVNTIKREFIAKFGRVILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVG 1790
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VA++RAK L ILG+
Sbjct: 1791 FLSDFRRMNVALTRAKTTLWILGN 1814
>gi|393245230|gb|EJD52741.1| Dna2-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1134
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKSIILYSSTCTSKSKES- 62
G+ IGVI+ YR Q+ L+ L +E+ TVD+ QGRDK +L S ++ ++
Sbjct: 958 GVNETDIGVISLYRQQLKALQHALQARSKLEVMTVDRSQGRDKECVLVSMVRSNAEGDTG 1017
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
++L D +R+ VA++RA+ KL+I+G + + I
Sbjct: 1018 ELLKDWRRINVALTRARRKLVIVGSRKTLDKI 1049
>gi|423303764|ref|ZP_17281763.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|423307517|ref|ZP_17285507.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
gi|392687095|gb|EIY80392.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|392690126|gb|EIY83397.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
Length = 610
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
IG+I+ Y+ QV L+ + D +NTVD +QG+++ +I S ++ +
Sbjct: 503 IGIISPYKAQVQYLRSKIKADASLKPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQI 562
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +R+ VAI+RA+ KL+ILG+ + +
Sbjct: 563 GFLNDLRRMNVAITRARMKLVILGEAETL 591
>gi|385304861|gb|EIF48863.1| hexameric dna polymerase alpha-associated dna helicase a involved
in lagging strand dna synthesis [Dekkera bruxellensis
AWRI1499]
Length = 703
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 28/117 (23%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRL--------------------------LDKDIE 34
SL+S G+ D IG+I Y QV+ L++L LDK IE
Sbjct: 557 SLLSRGVHQDEIGIITPYSAQVTKLRQLFRSGTLNFADDDDXDNEKKYIDEQSLLDK-IE 615
Query: 35 INTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+TVD +QGR+K II+ S +++ L+D KRL V+I+R K +L ++GD I
Sbjct: 616 ISTVDGFQGREKEIIILSLVRSNEKHNVGFLSDEKRLNVSITRCKKQLCVVGDFDTI 672
>gi|340376668|ref|XP_003386854.1| PREDICTED: hypothetical protein LOC100632119 [Amphimedon
queenslandica]
Length = 799
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL----DKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
GI I I Y++Q L+ + L D +E+ T+D+ QGRDKS +L S ++ S +
Sbjct: 647 GISPSDILAITQYKSQERLMNKWLQKPEDWAVEVLTIDKCQGRDKSCVLVSFVRSNTSGK 706
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D KR+ VA++RAKHKLI +G +
Sbjct: 707 VGQLLDWKRVNVAMTRAKHKLIFIGSYSTL 736
>gi|63054942|gb|AAY29009.1| dna2-nam7 helicase family protein [Pyrococcus sp. 304]
Length = 178
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L +G+ + IGVI Y +Q L+ + ++IE+ TVD YQGR+K +I+ S ++++ E
Sbjct: 102 LEAGVKPEWIGVITPYDDQRDLISMSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEI 161
Query: 63 KILNDRKRLTVAISRAK 79
L D +RL V+++RA+
Sbjct: 162 GFLKDLRRLNVSLTRAR 178
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 920 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 979
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 980 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 1014
>gi|237808671|ref|YP_002893111.1| NERD domain-containing protein [Tolumonas auensis DSM 9187]
gi|237500932|gb|ACQ93525.1| NERD domain protein [Tolumonas auensis DSM 9187]
Length = 1656
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKS 59
T IG+I YR QV LL+ L+ I+I+T+D YQG + II+ S + +
Sbjct: 1516 TPPIGIITGYRKQVELLELNLENAAWAAGIRDLIKIDTIDSYQGSENRIIMLSLVRHNAN 1575
Query: 60 KESKILNDRKRLTVAISRAKHKLIILG 86
++ +ND R+ VA+SRAK +LII+G
Sbjct: 1576 NKTGFMNDNARVNVALSRAKERLIIVG 1602
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%)
Query: 1 MSLISGIPTDH--------IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGR 44
++L + TDH IG++ Y+ QV L+R + I+ NTVD +QG+
Sbjct: 1858 LALYERLRTDHPRENFDYRIGIVTMYKAQVFELRRTFQQRYGQDIVERIDFNTVDGFQGQ 1917
Query: 45 DKSIILYSSTCTSKSKESK---ILNDRKRLTVAISRAKHKLIILGDLQ 89
+K II+ S C + E + L+DR+RL VA++RAK L ++G+ +
Sbjct: 1918 EKDIIILS--CVRSASEPRSIGFLSDRRRLNVAVTRAKSNLFVIGNAE 1963
>gi|393785219|ref|ZP_10373372.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
gi|392662922|gb|EIY56477.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
Length = 634
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 13 GVIATYRNQVSLLK---------RLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ Y+ QV L+ R + I INTVD +QG+++ +I S +++ +
Sbjct: 527 GLISPYKAQVQYLRNKIKSSSFFRPFRELITINTVDGFQGQERDVIFISLVRANENGQIG 586
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +R+ VAI+RA+ KL+ILG+ Q +
Sbjct: 587 FLNDLRRMNVAITRARMKLVILGEAQTL 614
>gi|268580185|ref|XP_002645075.1| Hypothetical protein CBG16740 [Caenorhabditis briggsae]
Length = 617
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD-----------KDIEINTVDQYQGRDKSIILYSST 54
G+ D I +I+ YR QV LL ++D K+ +I TVD QG++ I++++S
Sbjct: 442 GVQPDKIALISPYRAQVELLSSMIDEYYEKTKNIDCKNTKIGTVDSVQGKEYDIVIFTSV 501
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILG 86
+ K + D +RL VA+SRAK +++G
Sbjct: 502 RNNPQKNFGFVADVRRLNVAVSRAKRHFVLIG 533
>gi|222480116|ref|YP_002566353.1| DNA replication factor Dna2 [Halorubrum lacusprofundi ATCC 49239]
gi|222453018|gb|ACM57283.1| DNA replication factor Dna2 [Halorubrum lacusprofundi ATCC 49239]
Length = 901
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ D IGVIA +R QV+ + R + ++TVD++QG K +I+ S T + I
Sbjct: 803 AGVDPDDIGVIAPFRAQVAEIGR--RTAVTVDTVDRFQGSSKEVIVVSLVATG-DLDGPI 859
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK +L ++GD
Sbjct: 860 FEDHRRMNVALTRAKKQLTLVGD 882
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 9 TDHIGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSKSK 60
T IGVI YR+Q+ L+R I+I TVD +QG++K II +S +
Sbjct: 1530 TGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKH 1589
Query: 61 ESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RA+ L+I+G+++ +
Sbjct: 1590 GIGFLRDFRRLNVALTRARSSLLIIGNMETL 1620
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
I +I+ Y +QV K LL+ D + INT+D +QG+++ I++ S T +++ ++
Sbjct: 515 IAIISPYASQVDKFKALLEADPLSIYKDKVTINTIDGFQGQERDIVIISLTRSNQERKIG 574
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VA++RAK KL+++GD
Sbjct: 575 FLSDIRRMNVAMTRAKKKLVMVGD 598
>gi|294946503|ref|XP_002785099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898511|gb|EER16895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 422
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q + +R+L+ D I INTVD QG ++ +IL+S+
Sbjct: 247 AGVEPGDIGIVVPYSGQKTQKERMLESDYRLPRESVERISINTVDACQGSERELILFSAV 306
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+++ + D +R+ V ++RAK L++ GD++ + A
Sbjct: 307 RSNRDGDIGFTGDPRRMNVVLTRAKRSLVVFGDVKTLSA 345
>gi|336388939|gb|EGO30083.1| putative restrictase [Serpula lacrymans var. lacrymans S7.9]
Length = 366
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRL 71
I V++ Y Q+ +LK LL + +T+D +QGR+ I+++S+ + S E + D +RL
Sbjct: 264 IAVLSPYTRQIEMLKSLLPSTVACHTIDSFQGRESDIVIFSTVRCNVSGEIGFVEDARRL 323
Query: 72 TVAISRAKHKLIILGDLQVI 91
V +RA+ LII+GD + +
Sbjct: 324 NVMWTRARLGLIIIGDRETM 343
>gi|307108218|gb|EFN56459.1| hypothetical protein CHLNCDRAFT_57676 [Chlorella variabilis]
Length = 670
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 12 IGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYSSTCTSK-SKES 62
+ VI+ Y+ QVSLL+RL K ++INT+D +QGR+K I +S+ + + S+
Sbjct: 480 VAVISPYKAQVSLLRRLFRAALGEEAAKMVDINTIDGFQGREKDIAFFSTVRSQRGSRGI 539
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQ 89
+ D +R+ V ++RA+ LI++G ++
Sbjct: 540 GFVADERRINVGLTRARASLIVVGHVE 566
>gi|358375281|dbj|GAA91865.1| DNA helicase [Aspergillus kawachii IFO 4308]
Length = 733
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+GI + I VI Y Q+++L ++L + IE+ +VD +QGR+K ++ S ++ E
Sbjct: 615 AGIHPEDIAVITPYNGQLAVLSQMLREKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHE 674
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +R+RL VA++R K L I GD + I
Sbjct: 675 VGFLGERRRLNVAMTRPKRHLCICGDSETI 704
>gi|346974499|gb|EGY17951.1| DNA replication ATP-dependent helicase dna2 [Verticillium dahliae
VdLs.17]
Length = 1623
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLKRLL--DKDIEINTVDQYQGRDKSIILYSSTCTSK 58
SL++ G+ IGV+ YR+Q++LLK L +E++T D++QGRDK +++ S ++
Sbjct: 1422 SLVAVGVAETEIGVMTHYRSQLALLKHGLRGHPSVEMHTADRFQGRDKEVVVLSLVRSND 1481
Query: 59 S-KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ +L D +R+ VA +RAK KL+++G + +
Sbjct: 1482 ACAIGDLLKDWRRINVAFTRAKTKLLVVGSRETL 1515
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 57/91 (62%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L + + + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++
Sbjct: 834 LKNKVKENEIGIISPYQAQQELISQCVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGI 893
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+ND KRL VA++RAK LI++G++Q +I
Sbjct: 894 GFVNDYKRLNVALTRAKCGLIVIGNIQTLIG 924
>gi|332158283|ref|YP_004423562.1| DNA helicase-like protein [Pyrococcus sp. NA2]
gi|331033746|gb|AEC51558.1| DNA helicase related protein [Pyrococcus sp. NA2]
Length = 1296
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 12 IGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN---DR 68
IGV+ YR Q L++ L+D ++++TV+++QG +K +I+ S T + S SK+++ D
Sbjct: 1165 IGVVVPYRAQKRLIRSLVD--VQVDTVERFQGGEKDVIIVSMTSSDPSYLSKVMDFLYDP 1222
Query: 69 KRLTVAISRAKHKLIILG 86
RL VA SRAK KLI++
Sbjct: 1223 NRLNVAGSRAKEKLILIA 1240
>gi|329961517|ref|ZP_08299598.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
gi|328531729|gb|EGF58558.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
Length = 627
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 13 GVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
G+I+ YR QV L+ + D + +NTVD +QG+++ +I S ++ +
Sbjct: 524 GIISPYRAQVQYLRNKIKTDASLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQIG 583
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
LND +R+ VAI+RA+ KL+ILG+
Sbjct: 584 FLNDLRRMNVAITRARMKLVILGE 607
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S L++ L K+IE+ +VD +QGR+K I+ S
Sbjct: 758 AGVKFSQIGIITPYEGQRSYIVSSMQQSGSLRKDLYKEIEVASVDAFQGREKDYIIVSCV 817
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RAK+ ++ILG+ +V+
Sbjct: 818 RSNEHQGIGFLSDPRRLNVALTRAKYGVVILGNPKVL 854
>gi|258573219|ref|XP_002540791.1| DNA helicase [Uncinocarpus reesii 1704]
gi|237901057|gb|EEP75458.1| DNA helicase [Uncinocarpus reesii 1704]
Length = 725
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKS 59
+ +G+ + I VI Y QV+LL +LL + +EI +VD +QGR+K ++ S ++
Sbjct: 602 IAAGVVEEDIAVITPYNAQVALLAQLLKEKYPGLEIGSVDGFQGREKEAVVVSLVRSNPE 661
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+E L +++RL VA++R + L + GD + I
Sbjct: 662 REVGFLGEKRRLNVAMTRPRRHLCVCGDSETI 693
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 760 AGVKPADIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCV 819
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 820 RSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 856
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + + +EI +VD +QGR+K I+ S
Sbjct: 826 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILS 885
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RAK+ +II+G+
Sbjct: 886 CVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGN 920
>gi|387129516|ref|YP_006292406.1| nuclease-like protein,protein kinase family protein [Methylophaga sp.
JAM7]
gi|386270805|gb|AFJ01719.1| nuclease-like protein,protein kinase family protein [Methylophaga sp.
JAM7]
Length = 1683
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTC 55
SG P IGVI Y Q LL+R ++ I+I+TVD YQG++ +I+ S T
Sbjct: 1551 SGEPA--IGVICMYGAQKRLLRRKFNELAWSPEFRTLIKIDTVDSYQGKENRVIIVSITR 1608
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGDLQV 90
K ++ K L + R+ VA+SRA +L+I+G +Q+
Sbjct: 1609 NGKDRKPKFLKEPNRINVAMSRAMDRLLIVGSMQM 1643
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLL---------KRL-LDKDIEINTVDQYQGRDKSIILYS 52
L +G+ IGVI Y Q + + RL L K+IE+ +VD +QGR+K I+ S
Sbjct: 767 LKNGVDPQRIGVITPYEGQRAFIVQHFLRSGTMRLELYKEIEVASVDAFQGREKDFIILS 826
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RA+ LIILG+ +V+
Sbjct: 827 CVRSNEHQGIGFLSDPRRLNVALTRARFGLIILGNPKVL 865
>gi|449491958|ref|XP_004175605.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Taeniopygia guttata]
Length = 886
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 732 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 791
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 792 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 826
>gi|445131467|ref|ZP_21381765.1| NERD domain-containing protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444850293|gb|ELX75395.1| NERD domain-containing protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 462
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
IGVI Y NQ LL+RLL + I+I+TVD YQG++ II+ ++T +
Sbjct: 336 IGVICMYANQERLLQRLLSEQDWATGYRHLIKIDTVDSYQGKENRIIIVATTRNNNQCIQ 395
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
L+ +R+ VAISRA +L+I+G
Sbjct: 396 GFLSSSERINVAISRAMDRLVIIG 419
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 776 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 835
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 836 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 870
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 760 AGVKPADIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCV 819
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 820 RSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 856
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 760 AGVKPADIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCV 819
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 820 RSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 856
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 12 IGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
+GVI+ Y+ QVS L L+ K I NTVD +QG++ +I S +++ E
Sbjct: 525 VGVISPYKAQVSFLTEQLENFETLASLGKKISFNTVDGFQGQECDLIAISLVRSNEKNEI 584
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
L D +R+ VAI+RAK KL+I+GD
Sbjct: 585 GFLADTRRMNVAITRAKKKLLIIGD 609
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 13/89 (14%)
Query: 12 IGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IGV+ Y+ QV LKR + I+ NTVD +QG++K II+ S C + E +
Sbjct: 1883 IGVVTMYKAQVFELKRTFQQRYGLDIADRIDFNTVDGFQGQEKDIIILS--CVRSAAEPR 1940
Query: 64 ---ILNDRKRLTVAISRAKHKLIILGDLQ 89
L+DR+RL VA++RAK L ++G+ +
Sbjct: 1941 SIGFLSDRRRLNVAVTRAKSNLFVIGNAE 1969
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
GI + IGVI Y Q +S+ LL+K ++EI +VD +QGR+K I+ S
Sbjct: 749 GIKPEQIGVITPYEGQRAYLVQFMSMNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSC 808
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+ ++ L+D +RL VA++RAK+ L++LG+
Sbjct: 809 VRANDTQSIGFLSDPRRLNVALTRAKYGLLVLGN 842
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + + +EI +VD +QGR+K I+ S
Sbjct: 763 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILS 822
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RAK+ +II+G+
Sbjct: 823 CVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGN 857
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 762 AGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCV 821
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S ++ L+D +RL V ++RAK+ L+ILG+ +V+
Sbjct: 822 RSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVL 858
>gi|183233537|ref|XP_654409.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169801534|gb|EAL49041.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 979
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++ +N
Sbjct: 801 IEENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVN 860
Query: 67 DRKRLTVAISRAKHKLIILGDLQVIIA 93
D KRL VA++RAK LII+G++ +I
Sbjct: 861 DYKRLNVALTRAKSGLIIIGNIPTLIT 887
>gi|71005206|ref|XP_757269.1| hypothetical protein UM01122.1 [Ustilago maydis 521]
gi|46096405|gb|EAK81638.1| hypothetical protein UM01122.1 [Ustilago maydis 521]
Length = 847
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD---------------KDIEINTVDQYQGRDKSIIL 50
G+ + ++ Y QVSLL ++ ++IE+ T+D QGR+K ++L
Sbjct: 716 GVHARQVTILTPYSAQVSLLHSMIRLHRFSGRIASAVVNAEEIELGTIDSMQGREKDVVL 775
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNT 100
S ++ ++ L +KRL VAI+RAK +L+++GD I + P++
Sbjct: 776 ISLVRSNAEQQVGFLAQKKRLNVAITRAKRQLVLVGDADTISGAKDLPDS 825
>gi|448578437|ref|ZP_21643872.1| DNA helicase [Haloferax larsenii JCM 13917]
gi|445726978|gb|ELZ78594.1| DNA helicase [Haloferax larsenii JCM 13917]
Length = 884
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + +
Sbjct: 786 AGVAPEDIGVIAPFRAQVAEISR--RTDVTVDTVDRFQGSSKEVIIVSFVATG-DLDGPL 842
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 843 FEDHRRINVALTRAKKALCLVGD 865
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 21/99 (21%)
Query: 10 DHIGVIATYRNQVSLLKRLLDKD---------------------IEINTVDQYQGRDKSI 48
D IG+IA Y Q+ LL RLL D IE+ TVD ++GR+K +
Sbjct: 712 DDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQMSNIEVKTVDGFEGREKEV 771
Query: 49 ILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
I++S+ + L D +RL V ++RA+ L +LG+
Sbjct: 772 IIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGN 810
>gi|294877934|ref|XP_002768200.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
gi|239870397|gb|EER00918.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
Length = 970
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIE------INTVDQYQGRDKSIILYSSTCTSK 58
+GI D VI+ Y QV L++ L +++VD YQG+++ +++ S ++
Sbjct: 562 AGIKRDQTAVISPYNRQVGLIRDALKSSTGETDASFVSSVDSYQGQEQEVVVLSLVRSND 621
Query: 59 SKESKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+ E L D +RL VA++RAK +L+++GD + I A
Sbjct: 622 AGEVGFLKDYRRLNVAVTRAKRQLVLVGDSETIGA 656
>gi|118368904|ref|XP_001017658.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila]
gi|89299425|gb|EAR97413.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila
SB210]
Length = 676
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLDKD------IEINTVDQYQGRDKSIILYSSTCTS 57
+ G+ +GVI Y QV L+K+L + + +E++TVD +QGR+K I+ S ++
Sbjct: 563 LQGLQEKEVGVITPYNAQVDLIKKLFENNNINTQQVEVSTVDGFQGREKECIIISMVRSN 622
Query: 58 KSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ L+D +R+ VA++RA+ + ++GD + +
Sbjct: 623 PLNQVGFLSDYRRMNVAVTRARKFVCLIGDSETV 656
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 761 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 820
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 821 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 855
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 750 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 809
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 810 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 844
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 724 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 783
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 784 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 818
>gi|432888018|ref|XP_004075026.1| PREDICTED: putative helicase mov-10-B.2-like [Oryzias latipes]
Length = 843
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLDKD----------IEINTVDQYQGRDKSIILYSS 53
+S +P IG+I+ YR QV +++ + D +E+ TVD++QG++ S+IL S+
Sbjct: 695 VSHVPPGEIGIISPYRKQVEKIQKAIQWDADLSKENLENVEVGTVDKFQGKEFSVILMST 754
Query: 54 T-CTSKSKESK-----ILNDRKRLTVAISRAKHKLIILGDLQVI 91
C K K + + D +R VA++RA+ L+++GD +++
Sbjct: 755 VRCFPKLKHKQNFILGFIRDDRRFNVAMTRARSLLVVVGDPRLL 798
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + + +EI +VD +QGR+K I+ S
Sbjct: 754 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILS 813
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RAK+ +II+G+
Sbjct: 814 CVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGN 848
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 826 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 885
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 886 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 920
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 776 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 835
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 836 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 870
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 787 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLYTKLYQEVEIASVDAFQGREKDFIILS 846
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 847 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 881
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 776 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 835
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 836 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 870
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 787 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 846
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 847 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 881
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 776 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 835
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 836 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 870
>gi|378956329|ref|YP_005213816.1| NERD domain-containing protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357206940|gb|AET54986.1| NERD domain protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
Length = 719
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 12 IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
IGVI Y NQ LL+RLL + I+I+TVD YQG++ II+ ++T +
Sbjct: 593 IGVICMYANQERLLQRLLSEQDWATGYRHLIKIDTVDSYQGKENRIIIVATTRNNNQCIQ 652
Query: 63 KILNDRKRLTVAISRAKHKLIILG 86
L+ +R+ VAISRA +L+I+G
Sbjct: 653 GFLSSSERINVAISRAMDRLVIIG 676
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 739 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 798
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 799 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 833
>gi|358393899|gb|EHK43300.1| hypothetical protein TRIATDRAFT_294361 [Trichoderma atroviride IMI
206040]
Length = 1759
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 9 TDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
T I V+ Y Q +LK+LL + E++++D +QGR+ I+++ + ++S+E L
Sbjct: 1650 TTSIAVLTPYSRQSEILKKLLSAIPNAEVSSIDGFQGREADIVIFVTVRCNESREIGFLK 1709
Query: 67 DRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK LII+G+
Sbjct: 1710 DLRRMNVALTRAKLGLIIVGN 1730
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 780 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 839
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 840 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 874
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 787 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 846
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 847 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 881
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 785 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 844
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 845 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 879
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 3 LISGIPTD----HIGVIATYRNQVSLLK--------RLLDKDIEINTVDQYQGRDKSIIL 50
L+ +P D IG+I+ Y+ Q+ LK L+ +I+ NTVD +QG++K II+
Sbjct: 1646 LMQILPQDKFRGRIGIISPYKEQIRTLKDTFVRKYGNLILNEIDFNTVDGFQGQEKEIII 1705
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQ 89
S S+S L+D +R+ VA++RA+ L ILG+ Q
Sbjct: 1706 MSCVRASESGSVGFLSDVRRMNVALTRARTTLWILGNKQ 1744
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 794 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 853
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 854 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 888
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 970 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 1029
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 1030 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 1064
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 742 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 801
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 802 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 836
>gi|111219741|ref|YP_710535.1| helicase [Frankia alni ACN14a]
gi|111147273|emb|CAJ58923.1| hypothetical protein; putative helicase [Frankia alni ACN14a]
Length = 996
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 13 GVIATYRNQVSLLKRLL--------DKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
VI YR QV LL+R L + + I TVD +QG ++ +I+Y T ++++
Sbjct: 867 AVIVPYREQVQLLRRTLISRLGGPGNVEDNIGTVDAFQGNERDLIIYGFTRSNRTGSVGF 926
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L++ +RL VA+SR + +L+++GDL +
Sbjct: 927 LSELRRLNVAMSRTRRQLVLVGDLDTL 953
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 715 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 774
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 775 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 809
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 758 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 817
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 818 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 852
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 795 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 854
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 855 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 889
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG+I Y Q S + K+ KD+E+ +VD +QGR+K I+ S
Sbjct: 753 AGVQPGDIGIITPYEGQRSYVVSSMQATGSFKKENYKDVEVASVDAFQGREKDFIILSCV 812
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 813 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 849
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 718 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 777
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 778 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 812
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 779 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 838
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 839 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 873
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 782 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 841
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 842 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 876
>gi|72049920|ref|XP_788148.1| PREDICTED: putative helicase MOV-10-like [Strongylocentrotus
purpuratus]
Length = 953
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 62/93 (66%), Gaps = 12/93 (12%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
I + IGVI+ YR QV L+R+L+K +I++ +V+++QG+++++I+ S+ ++K++
Sbjct: 849 IKEEDIGVISPYRKQVQKLRRVLEKRRYGNIKVGSVEEFQGQERTVIIISTVRSTKAEYI 908
Query: 63 KI--------LNDRKRLTVAISRAKHKLIILGD 87
++ L + KR VA++RAK LII+G+
Sbjct: 909 EMDIDFKLGFLKNPKRFNVAVTRAKALLIIVGN 941
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 792 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 851
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 852 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 886
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 781 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 840
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 841 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 875
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 726 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 785
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 786 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 820
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 722 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 781
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 782 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 816
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 792 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 851
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 852 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 886
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 760 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 819
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 820 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 854
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 206 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 265
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 266 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 300
>gi|340501324|gb|EGR28123.1| tRNA-splicing endonuclease positive effector-related, putative
[Ichthyophthirius multifiliis]
Length = 323
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 14/92 (15%)
Query: 7 IPTDH--IGVIATYRNQVSLLKRLLDKD---------IEINTVDQYQGRDKSIILYSSTC 55
P+++ IGVIA Y QV LK L + I+I T+D +QG++K II++S+
Sbjct: 127 FPSNNLTIGVIAPYSQQVQCLKNLFRQQNWYLIYRKIIKIKTIDSFQGQEKDIIIFSTVR 186
Query: 56 TSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
TS+ L D KRL VA++RAK+ L ++G+
Sbjct: 187 TSR---IGFLQDEKRLNVALTRAKYCLYVVGN 215
>gi|429964317|gb|ELA46315.1| hypothetical protein VCUG_02203 [Vavraia culicis 'floridensis']
Length = 849
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
++G+ +G+I Y Q LL RL E+ VD +QGR+K+ I+ S ++ +
Sbjct: 714 MNGVRETEVGIITPYEGQRVLLSRL--TACEVANVDAFQGREKAFIIISLVRSNSINDIG 771
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
++DR+R+ VA++RAKH L I+G+
Sbjct: 772 FVSDRRRMCVALTRAKHGLFIVGN 795
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 760 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 819
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 820 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 854
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 814 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 873
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 874 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 908
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 769 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 828
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 829 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 863
>gi|288917484|ref|ZP_06411850.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Frankia sp. EUN1f]
gi|288351187|gb|EFC85398.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Frankia sp. EUN1f]
Length = 996
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 13 GVIATYRNQVSLLKRLLDKDI--------EINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
VI YR QV LL++ L + + I TVD +QG ++ +I+Y T +++ E
Sbjct: 867 AVIVPYREQVQLLRQTLVRRLGGPVSVEDNIGTVDAFQGNERDLIIYGFTRSNRGGEVGF 926
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVI 91
L++ +RL VA++R + +L+++GDL+ +
Sbjct: 927 LSELRRLNVAMTRTRRQLVLVGDLETL 953
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 667 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 726
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 727 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 761
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 54/87 (62%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++ +N
Sbjct: 801 IEENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVN 860
Query: 67 DRKRLTVAISRAKHKLIILGDLQVIIA 93
D KRL VA++RAK LII+G++ ++
Sbjct: 861 DYKRLNVALTRAKRGLIIIGNIPTLVT 887
>gi|448592491|ref|ZP_21651598.1| DNA helicase [Haloferax elongans ATCC BAA-1513]
gi|445731496|gb|ELZ83080.1| DNA helicase [Haloferax elongans ATCC BAA-1513]
Length = 884
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
+G+ + IGVIA +R QV+ + R D+ ++TVD++QG K +I+ S T + +
Sbjct: 786 AGVAPEDIGVIAPFRAQVAEISR--RTDVTVDTVDRFQGSSKEVIIVSFVATG-DLDGPL 842
Query: 65 LNDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 843 FEDHRRINVALTRAKKALCLVGD 865
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQ----------VSLLKRLLDKDIEINTVDQYQGRDKSIILYS 52
L +G+ + +GV+ Y Q +L++ L +I++ +VD +QGR+K I+ S
Sbjct: 786 LRAGVAPEALGVVTPYEGQRAYVVQHMTRAGVLRQQLYNEIQVASVDSFQGREKDFIILS 845
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ LND +RL VA++RA+ L+ILG+ +V+
Sbjct: 846 CVRSNEKAGIGFLNDPRRLNVAMTRARSGLVILGNPKVL 884
>gi|449329094|gb|AGE95368.1| hypothetical protein ECU05_1110 [Encephalitozoon cuniculi]
Length = 563
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S++ + + +G+IA Y +QV LL+ ++D +E++TVD +QG+++ I+ + + +
Sbjct: 443 SIVGILKEEQVGIIAPYTSQVLLLREMVD--VEVSTVDGFQGQERDYIILTLVRCNDRDD 500
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L++ KRL VA++R + L+I+GD
Sbjct: 501 FGFLDNGKRLNVALTRCRKGLVIVGD 526
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYS 52
L G+ + IG+I Y Q + L++ L ++E+ +VD +QGR+K I+ S
Sbjct: 779 LKGGVVPEQIGIITPYEGQRAYIVQYMSRNGSLRKQLYNELEVASVDAFQGREKDFIILS 838
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ K +N+ +RL VA++RA++ ++ILG+ +V+
Sbjct: 839 CVRSNEGKSIGFVNNPRRLNVALTRARYGVVILGNPKVL 877
>gi|406858745|gb|EKD11835.1| DNA-binding protein SMUBP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 690
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ + I VI Y Q++L+K + + IE+ +VD +QGR+K ++ S ++ KE
Sbjct: 571 AGVEPEDIAVITPYNAQLALIKSSIKEAFPGIELGSVDGFQGREKEAVIVSLVRSNSDKE 630
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L+++GD + +
Sbjct: 631 VGFLGEKRRLNVAMTRPKRSLVVIGDSETL 660
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 759 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 818
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 819 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 853
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 732 AGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCV 791
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+S ++ L+D +RL V ++RAK+ L+ILG+ +V+
Sbjct: 792 RSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVL 828
>gi|189236740|ref|XP_001815304.1| PREDICTED: similar to Mov10, Moloney leukemia virus 10, homolog
[Tribolium castaneum]
Length = 765
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 14/98 (14%)
Query: 7 IPTDHIGVIATYRNQV-----SLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
I DHIGV+ Y+ Q S LK+ + + + TV+Q+QG++K II+ ST SKS
Sbjct: 601 INEDHIGVVTPYKKQAEKIRHSCLKKKYSESLMVGTVEQFQGQEKLIIII-STVRSKSDL 659
Query: 62 SK--------ILNDRKRLTVAISRAKHKLIILGDLQVI 91
K LN+ KR VAI+RAK LII+G+ ++
Sbjct: 660 IKFDLKFHLGFLNNPKRFNVAITRAKALLIIVGNPNIL 697
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 54/87 (62%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILN 66
I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++ +N
Sbjct: 802 IEENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVN 861
Query: 67 DRKRLTVAISRAKHKLIILGDLQVIIA 93
D KRL VA++RAK LII+G++ ++
Sbjct: 862 DYKRLNVALTRAKRGLIIIGNIPTLVT 888
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + + +EI +VD +QGR+K I+ S
Sbjct: 762 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILS 821
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RAK+ +II+G+
Sbjct: 822 CVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGN 856
>gi|124803552|ref|XP_001347754.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496005|gb|AAN35667.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 1024
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 31 KDIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQV 90
K+IEI+TVD +QGR+K I+++S C++ K L D +RL VA++RAK L+I+G+
Sbjct: 929 KNIEISTVDSFQGREKEIVVFSLVCSNYFKNIGFLKDYRRLNVAVTRAKRHLVIVGNSNT 988
Query: 91 I 91
I
Sbjct: 989 I 989
>gi|425781089|gb|EKV19071.1| DNA helicase, putative [Penicillium digitatum PHI26]
gi|425783223|gb|EKV21082.1| DNA helicase, putative [Penicillium digitatum Pd1]
Length = 690
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ + + VI Y Q++LL R+L + +E+ +VD +QGR+K ++ S ++ +E
Sbjct: 599 AGVRPESVAVITPYNGQLALLSRILREKYPGLELGSVDGFQGREKEAVVVSLVRSNAERE 658
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L I GD + I
Sbjct: 659 VGFLGEKRRLNVAMTRPKRHLCICGDSETI 688
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 704 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 763
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 764 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 798
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 716 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 775
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 776 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 810
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 727 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 786
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 787 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 821
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 704 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 763
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 764 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 798
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 716 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 775
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 776 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 810
>gi|325189317|emb|CCA23837.1| DNA polymerase alphaassociated DNA helicase A putati [Albugo
laibachii Nc14]
Length = 931
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+GIP I VI Y QV +LK L + +EI +VD +QG +K ++ S ++K E
Sbjct: 576 AGIPAHDIAVITPYNKQVQVLKSRLSEAFPSLEIRSVDGFQGCEKEAVVMSLVRSNKKHE 635
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+ L D +R+ VA++RAK + ++ D + I A
Sbjct: 636 AGFLADERRMNVAVTRAKRHVALICDSETISA 667
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 827 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 886
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 887 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 921
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IG++ Y Q S LK+ L K++E+ +VD +QGR+K I+ S
Sbjct: 797 AGVEPWQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCV 856
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+++ + L+D +RL VA++RA+ L+ILG+ +V+
Sbjct: 857 RSNEHQGIGFLSDPRRLNVALTRARFGLVILGNPKVL 893
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 759 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 818
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 819 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 853
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 3 LISGIPTD----HIGVIATYRNQVSLLK--------RLLDKDIEINTVDQYQGRDKSIIL 50
L++ +P D IG+I+ Y+ Q+ +K R + DI+ NTVD +QG++K II+
Sbjct: 1648 LMTILPQDKFRGRIGIISPYKEQIRSIKNEFIRRYGRAIQDDIDFNTVDGFQGQEKEIII 1707
Query: 51 YSSTCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
S S S L+D +R+ VA++RA+ L ILG+
Sbjct: 1708 MSCVRASPSGNVGFLSDVRRMNVALTRARTTLWILGN 1744
>gi|342886806|gb|EGU86518.1| hypothetical protein FOXB_02952 [Fusarium oxysporum Fo5176]
Length = 251
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESKI 64
P+ I V+ Y Q +LKR+L IE++++D++QGR+ +I++ + + +E
Sbjct: 127 PSHSIVVLTPYTRQAEVLKRMLSSIPYRIEVSSIDRFQGREADVIVFVTVRCKEHREIGF 186
Query: 65 LNDRKRLTVAISRAKHKLIILG 86
L D +R+ VA++RA+ LI++G
Sbjct: 187 LKDMRRMNVALTRARSALIVVG 208
>gi|157123110|ref|XP_001660012.1| DNA-binding protein smubp-2 [Aedes aegypti]
gi|108874505|gb|EAT38730.1| AAEL009395-PA [Aedes aegypti]
Length = 699
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLL-DKD---IEINTVDQYQGRDKSIILYSSTCTSKSKES 62
I + IG+I+ Y+ QV LK++ DK +EI +V+Q+QGR+K +I+ S T S + +
Sbjct: 563 IAQEDIGIISPYQLQVQRLKQMCQDKQWPSLEIGSVEQFQGREKLVIILS-TARSHTPDV 621
Query: 63 KILNDRKRLTVAISRAKHKLIILGD 87
LN+ KRL VA++RAK LI++G+
Sbjct: 622 GFLNNVKRLNVALTRAKALLIVIGN 646
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 718 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 777
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 778 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 812
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 760 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 819
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 820 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 854
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYSST 54
+G+ IGVI Y Q S + K+ K++E+ +VD +QGR+K I+ S
Sbjct: 769 AGVKPSDIGVITPYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCV 828
Query: 55 CTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ ++ L+D +RL VA++RAK+ L+I+G+ +V+
Sbjct: 829 RSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVL 865
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 785 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 844
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 845 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 879
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 713 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 772
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 773 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 807
>gi|307109973|gb|EFN58210.1| hypothetical protein CHLNCDRAFT_142077 [Chlorella variabilis]
Length = 442
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 12 IGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYSSTCTSKSKESKILNDR 68
IGV+ YR Q L+R + ++EI+TVD +QGR+K +I+ S + + ++DR
Sbjct: 343 IGVVTPYRAQAEQLRRRTQQLWPELEISTVDAFQGREKEVIIISPVRANSCERLGFVSDR 402
Query: 69 KRLTVAISRAKHKLIILGDLQVI 91
+RL VA++RA ++++G + +
Sbjct: 403 RRLNVALTRAMRAVVVVGHRETL 425
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 778 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 837
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 838 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 872
>gi|448546345|ref|ZP_21626509.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-646]
gi|448548332|ref|ZP_21627599.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-645]
gi|448557526|ref|ZP_21632715.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-644]
gi|445702798|gb|ELZ54738.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-646]
gi|445714083|gb|ELZ65850.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-644]
gi|445714427|gb|ELZ66189.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-645]
Length = 884
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESKIL 65
G+ D IGVIA +R QV+ + R D ++TVD++QG K +I+ S T + + +
Sbjct: 787 GVDADDIGVIAPFRAQVAEISR--RTDATVDTVDRFQGSSKEVIVVSFVATGEL-DGPLF 843
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
D +R+ VA++RAK L ++GD
Sbjct: 844 EDHRRINVALTRAKKALCLVGD 865
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL------------DKDIEINTVDQYQGRDKSIILYSS 53
G+ D IGVI Y Q + + L + ++E+++VD +QGR+K I+ S
Sbjct: 742 GVSPDQIGVITPYEGQRVYIWQYLKLNSTVPKSALNELEVEVSSVDAFQGREKDYIILSC 801
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ ++ L D +RL VA++RAK LIILG+
Sbjct: 802 VRANEDRDIGFLKDSRRLNVALTRAKFGLIILGN 835
>gi|123449356|ref|XP_001313398.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121895280|gb|EAY00469.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD-----------KDIEINTVDQYQGRDKSIILYSSTCT 56
P+D IGVI+ Y Q L+ L K IEI+++D +QGR+K +I++S+ +
Sbjct: 158 PSD-IGVISPYSGQNFYLRDNLHRYTKIAGEDYIKRIEISSIDSFQGREKELIIFSTVKS 216
Query: 57 SKSKESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRY 103
+ + + LND + L VA++RA+ LII+GD I N + RY
Sbjct: 217 NNTYDIGFLNDERSLNVALTRARCGLIIIGDSNTFIKSKNWLSLLRY 263
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKES 62
L + I + IG+I+ Y+ Q L+ + + I++ +D +QG +K I++S ++++
Sbjct: 739 LKNKIKENEIGIISPYQAQQELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGV 798
Query: 63 KILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
+ND KRL VA++RAK LII+G++ ++
Sbjct: 799 GFVNDYKRLNVALTRAKRGLIIIGNIPTLVT 829
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 12 IGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IGVI+ Y+ Q+ LK + K +++ NTVD YQG++K II+ S S++
Sbjct: 1082 IGVISPYKEQIRTLKDIFAKKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVG 1141
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L+D +R+ VA++RA+ L ILG+ + ++
Sbjct: 1142 FLSDVRRMNVALTRARTTLWILGNQKSLM 1170
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 434 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 493
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 494 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 528
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 12 IGVIATYRNQVSLLKR--------LLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IGV+ YR+QV L+ ++ K ++I+TVD +QG++K II++S +S S
Sbjct: 1671 IGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIG 1730
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VA++RAK L I+G+
Sbjct: 1731 FLQDLRRLNVALTRAKSSLYIVGN 1754
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----------DIEINTVDQYQGRDKSIILYS 52
L G+ IGVI Y Q + + L + D+E+ +VD +QGR+K IL S
Sbjct: 948 LKCGLKASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLS 1007
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ + L D +RL VA++RAK+ LII G+ V+
Sbjct: 1008 CVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNASVL 1046
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYSS 53
G+ + IGV+ Y Q +SL L+DK ++E+ +VD +QGR+K I+ S
Sbjct: 715 GVKAEQIGVVTPYEGQRAYILQHMSLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSC 774
Query: 54 TCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
+++ L+D +RL VA++RAK+ L+I+G+
Sbjct: 775 VRANETHGIGFLSDSRRLNVALTRAKYGLVIVGN 808
>gi|19173651|ref|NP_597454.1| similarity to HYPOTHETICAL ZINC FINGER PROTEINS YDRD_SCHPO
[Encephalitozoon cuniculi GB-M1]
gi|19170857|emb|CAD26631.1| similarity to HYPOTHETICAL ZINC FINGER PROTEINS YDRD_SCHPO
[Encephalitozoon cuniculi GB-M1]
Length = 563
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSKE 61
S++ + + +G+IA Y +QV LL+ ++D +E++TVD +QG+++ I+ + + +
Sbjct: 443 SIVGILKEEQVGIIAPYTSQVLLLREMVD--VEVSTVDGFQGQERDYIILTLVRCNDRDD 500
Query: 62 SKILNDRKRLTVAISRAKHKLIILGD 87
L++ KRL VA++R + L+I+GD
Sbjct: 501 FGFLDNGKRLNVALTRCRKGLVIVGD 526
>gi|303286453|ref|XP_003062516.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456033|gb|EEH53335.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 648
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRL------LDKDIEINTVDQYQGRDKSIILYSSTCTSKS 59
+ D +G+I Y QV L+ L L K +EI+TVD +QGR+K I+ S+ ++
Sbjct: 528 AVAADDVGIITPYSAQVGTLRDLRAANDALFKGVEISTVDGFQGREKEAIVISAVRSNDR 587
Query: 60 KESKILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ L+D +R+ VA++RA+ + +++ D + I
Sbjct: 588 GDVGFLSDARRMNVAVTRARARCVLVCDTETI 619
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYS 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+ S
Sbjct: 249 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 308
Query: 53 STCTSKSKESKILNDRKRLTVAISRAKHKLIILGD 87
++ + LND +RL VA++RA++ +II+G+
Sbjct: 309 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 343
>gi|118349864|ref|XP_001008213.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89289980|gb|EAR87968.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1866
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 13/88 (14%)
Query: 12 IGVIATYRNQVSLLKRLLDKDI--------EINTVDQYQGRDKSIILYSSTCTSKSKESK 63
IG+I Y+ Q L+ L+ K I ++NTVD +QG++K II++++ + +E +
Sbjct: 1251 IGIITPYKQQTRLINELIRKQIPKSYHKFIQVNTVDSFQGQEKDIIIFTTVRVNSKQEWR 1310
Query: 64 -----ILNDRKRLTVAISRAKHKLIILG 86
L D +R+ VA++RAK+ LI+LG
Sbjct: 1311 ENMIGFLQDERRMNVALTRAKYCLIVLG 1338
>gi|294657940|ref|XP_460248.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
gi|199433066|emb|CAG88524.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
Length = 1141
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 37/121 (30%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLL-----------------DKD---------------- 32
GIP IG+I YR Q L+ +L D+D
Sbjct: 995 GIPKSEIGIITPYRGQRDLISSILVKNDLINPEKNDILVEVDRDDIYNESKPVTIHTVSE 1054
Query: 33 IEINTVDQYQGRDKSIILYSSTCTSKSKESKI--LNDRKRLTVAISRAKHKLIILGDLQV 90
I I ++D +QGR+K+ ++ S C +KES I L D +RL VA++RAK+ LII+GD+Q
Sbjct: 1055 IMIASIDAFQGREKNFLIMS--CVRSNKESNIGFLGDERRLNVALTRAKYGLIIIGDVQC 1112
Query: 91 I 91
+
Sbjct: 1113 L 1113
>gi|451845629|gb|EMD58941.1| hypothetical protein COCSADRAFT_261831 [Cochliobolus sativus
ND90Pr]
Length = 708
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD---IEINTVDQYQGRDKSIILYSSTCTSKSKE 61
+G+ + I V+ Y Q++LL +L ++ +E+ +VD +QGR+K ++ S+ ++ E
Sbjct: 589 AGVKPEDIAVVTPYNAQLALLAGMLKEEYPGMELGSVDGFQGREKEAVIVSTVRSNAEHE 648
Query: 62 SKILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VA++R K L ++GD + I
Sbjct: 649 VGFLGEKRRLNVAMTRPKRHLCVIGDSETI 678
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,699,896,140
Number of Sequences: 23463169
Number of extensions: 57369036
Number of successful extensions: 151749
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 2458
Number of HSP's that attempted gapping in prelim test: 145646
Number of HSP's gapped (non-prelim): 5199
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)