Your job contains 1 sequence.
>psy1354
MSLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYSSTCTSKSK
ESKILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQIPGTDGNRTN
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1354
(118 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030170 - symbol:CG2990 species:7227 "Drosophila m... 209 1.3e-15 1
UNIPROTKB|H0Y455 - symbol:DNA2 "DNA replication ATP-depen... 184 8.8e-14 1
UNIPROTKB|F8VR31 - symbol:DNA2 "DNA replication ATP-depen... 184 3.9e-13 1
UNIPROTKB|P51530 - symbol:DNA2 "DNA replication ATP-depen... 184 5.7e-13 1
UNIPROTKB|J3KPX5 - symbol:DNA2 "DNA replication ATP-depen... 184 6.3e-13 1
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 178 1.2e-12 1
MGI|MGI:2443732 - symbol:Dna2 "DNA replication helicase 2... 179 1.9e-12 1
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 178 2.3e-12 1
UNIPROTKB|F6UZP1 - symbol:DNA2 "Uncharacterized protein" ... 178 2.4e-12 1
UNIPROTKB|E2QSH2 - symbol:E2QSH2 "Uncharacterized protein... 178 2.4e-12 1
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 176 4.1e-12 1
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 176 4.1e-12 1
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 176 4.4e-12 1
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 175 4.8e-12 1
ZFIN|ZDB-GENE-090313-71 - symbol:dna2 "DNA replication he... 176 5.6e-12 1
WB|WBGene00001016 - symbol:dna-2 species:6239 "Caenorhabd... 171 1.5e-11 1
SGD|S000001207 - symbol:DNA2 "Tripartite DNA replication ... 172 1.7e-11 1
CGD|CAL0002159 - symbol:DNA2 species:5476 "Candida albica... 170 2.6e-11 1
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 167 3.7e-11 1
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 168 4.1e-11 1
UNIPROTKB|F6QXW0 - symbol:dna2 "DNA replication ATP-depen... 166 4.7e-11 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 161 8.9e-11 1
UNIPROTKB|Q4S102 - symbol:GSTENG00025786001 "Chromosome 5... 162 1.2e-10 1
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 118 9.8e-10 2
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 147 3.0e-09 1
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 147 3.0e-09 1
UNIPROTKB|G4MK85 - symbol:MGG_02491 "DNA replication ATP-... 145 1.4e-08 1
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 138 2.5e-08 1
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 136 3.9e-08 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 134 1.2e-07 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 134 1.2e-07 1
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 123 1.3e-07 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 134 1.5e-07 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 133 1.5e-07 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 134 2.6e-07 1
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 129 2.9e-07 2
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 131 2.9e-07 1
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 131 4.4e-07 1
RGD|1589127 - symbol:LOC684558 "similar to regulator of n... 123 4.6e-07 1
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 98 6.0e-07 2
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 96 7.3e-07 2
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 126 7.8e-07 1
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 125 1.1e-06 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 125 1.1e-06 1
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 124 1.3e-06 1
UNIPROTKB|I3LBB7 - symbol:I3LBB7 "Uncharacterized protein... 115 1.3e-06 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 123 1.9e-06 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 123 2.0e-06 1
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 123 2.0e-06 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 123 2.0e-06 1
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 123 2.0e-06 1
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 123 2.0e-06 1
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 122 2.0e-06 1
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 109 2.3e-06 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 125 3.1e-06 1
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 120 3.5e-06 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 120 3.5e-06 1
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 120 3.5e-06 1
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 120 3.7e-06 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 120 4.0e-06 1
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 123 5.1e-06 1
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 118 5.7e-06 1
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 118 5.7e-06 1
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 118 5.7e-06 1
UNIPROTKB|F1NWZ8 - symbol:DNA2 "DNA replication ATP-depen... 118 5.9e-06 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 121 6.2e-06 1
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 122 6.6e-06 1
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 117 6.8e-06 1
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 121 6.9e-06 1
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 117 7.5e-06 1
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 121 7.9e-06 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 117 1.0e-05 1
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 120 1.1e-05 1
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 115 1.1e-05 1
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 114 1.4e-05 1
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 118 1.5e-05 1
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 118 1.5e-05 1
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 115 1.5e-05 1
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 117 1.7e-05 1
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 113 1.8e-05 1
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 114 1.9e-05 1
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 110 2.0e-05 1
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 113 2.0e-05 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 115 2.2e-05 1
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 112 2.5e-05 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 112 2.5e-05 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 112 2.6e-05 1
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 112 3.2e-05 1
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 110 3.3e-05 1
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 114 3.5e-05 1
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 111 4.1e-05 1
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 111 4.3e-05 1
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 109 5.1e-05 1
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 109 5.2e-05 1
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 109 6.0e-05 1
ASPGD|ASPL0000064563 - symbol:AN7014 species:162425 "Emer... 110 6.2e-05 1
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 108 8.5e-05 1
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 104 0.00010 1
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 109 0.00011 1
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 105 0.00011 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 209 (78.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 49/99 (49%), Positives = 63/99 (63%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRL---LDKDIEINTVDQYQGRDKSIILYXXXXXXXX 59
L SG IGVIA YR QV L K+L LD D+E NTVDQ+QGRDK++I+Y
Sbjct: 959 LKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGD 1018
Query: 60 XX-------XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
IL D++RLTVAI+RAK+KLI+LGD++ +
Sbjct: 1019 FSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1057
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 184 (69.8 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYXXXXXXXXXXXX- 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L
Sbjct: 256 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 314
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 315 LLKDWRRLNVAITRAKHKLILLG 337
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYXXXXXXXXXXXX- 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L
Sbjct: 696 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 754
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 755 LLKDWRRLNVAITRAKHKLILLG 777
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 184 (69.8 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYXXXXXXXXXXXX- 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L
Sbjct: 934 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 992
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLG 1015
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 184 (69.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKDI---EINTVDQYQGRDKSIILYXXXXXXXXXXXX- 63
P+D IG+IA YR Q+ ++ LL + I E+NTVD+YQGRDKSI+L
Sbjct: 1020 PSD-IGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGE 1078
Query: 64 ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 1079 LLKDWRRLNVAITRAKHKLILLG 1101
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 178 (67.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXX-XX 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL
Sbjct: 513 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 571
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
+L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 572 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 609
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/86 (47%), Positives = 56/86 (65%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IGVIA YR Q+ ++ LL + +E+NTVD+YQGRDKS+IL
Sbjct: 935 PSD-IGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 993
Query: 64 -ILNDRKRLTVAISRAKHKLIILGDL 88
+L D +RL VA++RAKHKLI+LG +
Sbjct: 994 ELLKDWRRLNVALTRAKHKLILLGSV 1019
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 178 (67.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXX-XX 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL
Sbjct: 876 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 934
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
+L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 935 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 972
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 178 (67.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXX-XX 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL
Sbjct: 902 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 960
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
+L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 961 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 998
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 178 (67.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXX-XX 62
P+D IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL
Sbjct: 933 PSD-IGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 991
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNLGQI 109
+L D +RL VAI+RAKHKLI+LG + P+ RY LG++
Sbjct: 992 ELLKDWRRLNVAITRAKHKLILLGCV---------PSLNRYPPLGKL 1029
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 176 (67.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IG+IA YR Q+ + LL + +E+NTVD+YQGRDKS+IL
Sbjct: 932 PSD-IGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLG 990
Query: 64 -ILNDRKRLTVAISRAKHKLIILGDL 88
+L D +RL VAI+RAKHKLI+LG +
Sbjct: 991 ELLKDWRRLNVAITRAKHKLILLGSV 1016
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 176 (67.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI++
Sbjct: 934 PSD-IGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 992
Query: 64 -ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLG 1016
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 176 (67.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IG+IA YR Q+ ++ LL + +E+NTVD+YQGRDKSI++
Sbjct: 1010 PSD-IGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 1068
Query: 64 -ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI+LG
Sbjct: 1069 ELLKDWRRLNVAITRAKHKLILLG 1092
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 175 (66.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 39/84 (46%), Positives = 56/84 (66%)
Query: 8 PTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXXX- 62
P+D IG+I+ YR+Q+ L+ RL + +E+NT+D+YQGRDKSII+
Sbjct: 869 PSD-IGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIIIVSFVRNSNDENLG 927
Query: 63 XILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKLI++G
Sbjct: 928 ALLKDWRRLNVAITRAKHKLIMVG 951
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 176 (67.0 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 41/89 (46%), Positives = 55/89 (61%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXX 58
L +G IGVIA YR Q+ ++ LL D +E+NTVD+YQGRDKS+I+
Sbjct: 1246 LKAGCRACDIGVIAPYRQQLKVISSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNA 1305
Query: 59 XXXXX-ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAKHKL++LG
Sbjct: 1306 EGNLGELLQDWRRLNVAITRAKHKLLMLG 1334
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 171 (65.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 31/86 (36%), Positives = 56/86 (65%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKD-IEINTVDQYQGRDKSIILYXXX-XXXXXX 60
++SG+ IGV++ YR QV ++ +L+ D +E+NT+D YQGR+K +I++
Sbjct: 992 VMSGVKPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTK 1051
Query: 61 XXXILNDRKRLTVAISRAKHKLIILG 86
+L D +R+ VA++RA+ KL+++G
Sbjct: 1052 KSELLKDERRVNVALTRARQKLVVVG 1077
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 172 (65.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDI----EINTVDQYQGRDKS-IILYXXXXXX 57
L+SG+P + IGV+ YR Q+ LLK++ +K++ EI T DQ+QGRDK II+
Sbjct: 1352 LLSGVPCEDIGVMTLYRAQLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNS 1411
Query: 58 XXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L + +R+ VA++RAK KLII+G I
Sbjct: 1412 QLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTI 1445
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 170 (64.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLD--KDIEINTVDQYQGRDKS-IILYXXXXXXXXXXX 62
G+ D IGV++ YR Q+S+LK+ L+ KD+EI T DQYQGRDK II+
Sbjct: 1271 GVKEDEIGVMSFYRAQLSVLKKNLNNLKDLEILTADQYQGRDKECIIISLVRSNERKFAG 1330
Query: 63 XILNDRKRLTVAISRAKHKLIILG 86
++ + +RL VA +RAK KLIILG
Sbjct: 1331 DLMKEYRRLNVATTRAKTKLIILG 1354
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 167 (63.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IG+IA YR Q+ ++ + +E+NTVD+YQGRDKS+I+
Sbjct: 934 PSD-IGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Query: 64 -ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA++RAKHKLI+LG
Sbjct: 993 DLLKDWRRLNVALTRAKHKLIMLG 1016
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 168 (64.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 40/89 (44%), Positives = 52/89 (58%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
G+ IG+I+ Y++QV LL + L +IEINTVD+YQGRDK IIL
Sbjct: 1232 GVKQSSIGIISIYKSQVELLSKNLKSFTEIEINTVDRYQGRDKDIILISFVRSNSKNLVG 1291
Query: 64 -ILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D RL VA+SRAK K I+ G L +
Sbjct: 1292 ELLRDWHRLNVALSRAKVKCIMFGSLSTL 1320
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 166 (63.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
P+D IG+IA YR Q+ ++ + +E+NTVD+YQGRDKS+I+
Sbjct: 929 PSD-IGIIAPYRQQLKVISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 987
Query: 64 -ILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VA++RAKHKLI+LG
Sbjct: 988 DLLKDWRRLNVALTRAKHKLIMLG 1011
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 161 (61.7 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 34/90 (37%), Positives = 58/90 (64%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLL-DK----DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+P + IGVI+ Y QVS LK+L+ D+ DIEI+TVD +QGR+K +I+
Sbjct: 564 VPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFE 623
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +RL VA++R + +L+++G+++V+
Sbjct: 624 VGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 162 (62.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIIL--YXXXXXXXXXX 61
P D IGVIA YR Q+ + LL +E+NTVD+YQGRDKS+IL +
Sbjct: 934 PGD-IGVIAPYRQQLRTISGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPL 992
Query: 62 XXILNDRKRLTVAISRAKHKLIILG 86
+L D +RL VAI+RAK KL++LG
Sbjct: 993 GELLKDWRRLNVAITRAKSKLLMLG 1017
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 118 (46.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 33 IEINTVDQYQGRDKSIILYXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ + TVD +QG +KS I++ L D++RL VA++RAKH LI++G+ V+
Sbjct: 1036 LHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVL 1094
Score = 62 (26.9 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKDIEIN 36
+P + IGVI Y Q LL +L K++ IN
Sbjct: 968 VPLEEIGVITPYSAQRDLLSDILTKNVVIN 997
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 38/103 (36%), Positives = 58/103 (56%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL------------DKD--IEINTVDQYQGRDKSI 48
L SG+ IGVIA Y QV LK+ + DKD IEI+TVD +QGR+K +
Sbjct: 578 LSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEV 637
Query: 49 ILYXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+ L++++RL VA++R K +L ++GDL+++
Sbjct: 638 IILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELM 680
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 38/103 (36%), Positives = 58/103 (56%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLL------------DKD--IEINTVDQYQGRDKSI 48
L SG+ IGVIA Y QV LK+ + DKD IEI+TVD +QGR+K +
Sbjct: 578 LSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEV 637
Query: 49 ILYXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
I+ L++++RL VA++R K +L ++GDL+++
Sbjct: 638 IILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELM 680
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 145 (56.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 35/100 (35%), Positives = 62/100 (62%)
Query: 2 SLIS-GIPTDHIGVIATYRNQVSLLK-RLL-DKD------IEINTVDQYQGRDKSIILYX 52
SL++ G+P + IGV+ YR+Q++LLK +LL K+ +E++T D++QGRDK +++
Sbjct: 1468 SLMTLGVPANEIGVMTHYRSQLALLKHKLLRGKNTGDATAVEMHTADRFQGRDKEVVVLS 1527
Query: 53 XXXXXXX-XXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
+L D +R+ VA +RAK KL+++G + +
Sbjct: 1528 LVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVIGSRETL 1567
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 29/92 (31%), Positives = 52/92 (56%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXX 59
L +G+ I V+ Y QV+L+++LL + ++E+ +VD+ QGR+K I++
Sbjct: 540 LEAGLEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDV 599
Query: 60 XXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +++RL VAI+R K L ++GD +
Sbjct: 600 REVGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 136 (52.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYXXXXXXXX 59
SG+ IG+I Y QV LL+ L K D+EI+TVD +QGR+K I+
Sbjct: 521 SGVQPSDIGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSK 580
Query: 60 XXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D++R+ VA++R++ + I+ D + +
Sbjct: 581 KEVGFLKDQRRMNVAVTRSRRQCCIVCDTETV 612
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYXX 53
GI + IGVI Y Q +S+ LLDK ++EI +VD +QGR+K I+
Sbjct: 753 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 812
Query: 54 XXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
L+D +RL VA++RAK+ L+ILG+
Sbjct: 813 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGN 846
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 6 GIPTDHIGVIATYRNQ-------VSLLKRLLDK-----DIEINTVDQYQGRDKSIILYXX 53
GI + IGVI Y Q +S+ LLDK ++EI +VD +QGR+K I+
Sbjct: 753 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 812
Query: 54 XXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
L+D +RL VA++RAK+ L+ILG+
Sbjct: 813 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGN 846
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 123 (48.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 761 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 820
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 821 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 855
Score = 36 (17.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 95 VNCPNTGRYGNLGQIPGTDGNRTN 118
VN P GR G+ G G + N
Sbjct: 981 VNGPAAGRGAPKGKTGGRGGRQRN 1004
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 134 (52.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 3 LISGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYX 52
L SG+ IGVI Y Q + L++ L K+IE+ +VD +QGR+K I+
Sbjct: 801 LKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILS 860
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +RL VA++RA++ ++ILG+ +V+
Sbjct: 861 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 899
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 133 (51.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
G+ + IGVI Y QV LLK L K +EI TVD +QGR+K +I+
Sbjct: 580 GVKPNDIGVITPYNGQVKLLKSYLSKKYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPH 639
Query: 63 XI--LNDRKRLTVAISRAKHKLIILGDLQVI 91
+ L + +R VAI+RA+ ++++ D I
Sbjct: 640 KVGFLTEDRRTNVAITRARKHVVVVCDTDTI 670
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 134 (52.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 3 LISGIPTD---HIGVIATYRNQ-VSLLKRLLD-KDIEINTVDQYQGRDKSIILYXXXXXX 57
LIS P IGVI Y++Q V L +++E++T+D +QG++K +++
Sbjct: 1757 LISNYPNTKDLEIGVITPYKSQSVDLFNAFKGYQNVEVSTIDGFQGKEKDFVIFSSVRAH 1816
Query: 58 XXXXXXILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNTGRYGNL 106
L+D +R+ V ++RAK+ ++ILG+ ++ N +GNL
Sbjct: 1817 SGHSIGFLSDIRRMNVGLTRAKYSMVILGNSSLL------SNNDDWGNL 1859
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 129 (50.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 12 IGVIATYRNQVSLLKR--------LLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
IGV+ YR+QV L+ ++ K ++I+TVD +QG++K II++
Sbjct: 1671 IGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIG 1730
Query: 64 ILNDRKRLTVAISRAKHKLIILGD 87
L D +RL VA++RAK L I+G+
Sbjct: 1731 FLQDLRRLNVALTRAKSSLYIVGN 1754
Score = 32 (16.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 4/16 (25%), Positives = 11/16 (68%)
Query: 3 LISGIPTDHIGVIATY 18
++SG+ +DH + ++
Sbjct: 279 ILSGLQSDHTNLCPSF 294
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 131 (51.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +GI + IG+I Y Q + L + + ++IEI +VD +QGR+K II+
Sbjct: 761 LKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMS 820
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
LND +RL VA++RAK +II+G+ +V+
Sbjct: 821 CVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVL 859
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 131 (51.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 9 TDHIGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYXXXXXXXXX 60
T IGVI YR+Q+ L+R I+I TVD +QG++K II +
Sbjct: 1530 TGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKH 1589
Query: 61 XXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RA+ L+I+G+++ +
Sbjct: 1590 GIGFLRDFRRLNVALTRARSSLLIIGNMETL 1620
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 123 (48.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 54 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 113
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 114 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 148
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 98 (39.6 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 33 IEINTVDQYQGRDKSIILYXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
I I ++D +QGR+K ++ L D +RL VA++RAK+ LI++GD
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGD 1073
Score = 55 (24.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDKDIEIN 36
+ G+ + IG+I Y Q L+ L KD IN
Sbjct: 956 ITKGVKPEQIGIITPYSGQRDLISATLVKDDVIN 989
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 96 (38.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 34 EINTVDQYQGRDKS-IILYXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVII 92
E++TVD +QGR K II+ L +RL V I+RAK+ L ILG L+ ++
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Score = 45 (20.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 7/24 (29%), Positives = 18/24 (75%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDIE 34
+IG+I Y+ Q +++++ L+K+ +
Sbjct: 190 NIGIITHYKAQKTMIQKDLEKEFD 213
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 12 IGVIATYRNQVSLLKRLLDK--DIEINTVDQYQGRDKSIILYXXXXXXXXXXXXI--LND 67
IG+I+ YR QV L+ + I I+TVD +QGR++ II++ I L+D
Sbjct: 744 IGIISPYRQQVLALREIFKNYPGISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSD 803
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
+R+ VA++R + L+ILG+ + +
Sbjct: 804 VRRMNVALTRPRSSLLILGNTKAL 827
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 5 SGIPTDHIGVIATYRNQVSL----------LKRLLDKDIEINTVDQYQGRDKSIILYXXX 54
+G+ IGVI +Y Q S L L +++EI +VD +QGR+K I+
Sbjct: 757 AGVQPHQIGVITSYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCV 816
Query: 55 XXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +RL VAI+RAK+ L+++G+ +V+
Sbjct: 817 RSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL 853
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 5 SGIPTDHIGVIATYRNQVSLL----------KRLLDKDIEINTVDQYQGRDKSIILYXXX 54
+G+ IG+I Y Q S + K+ K+IE+ +VD +QGR+K I+
Sbjct: 736 AGVQPKDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCV 795
Query: 55 XXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +RL VA++RAK+ L+ILG+ +V+
Sbjct: 796 RSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVL 832
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 6 GIPTDHIGVIATYRNQVS-LLKRL-----LDKD----IEINTVDQYQGRDKSIILYXXXX 55
G+ + IGVI Y Q + +L+ + LDKD +E+ +VD +QGR+K I+
Sbjct: 720 GVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVR 779
Query: 56 XXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V ++RAK+ L+ILG+
Sbjct: 780 ANEQQAIGFLRDPRRLNVGLTRAKYGLVILGN 811
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 11 HIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIIL 50
+IG+IA YR Q+ ++ LL +E+NTVD+YQGRDKSIIL
Sbjct: 193 NIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIIL 236
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 123 (48.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 780 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 839
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 840 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 874
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 787 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 846
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 847 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 881
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 790 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 849
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 850 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 884
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 791 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 850
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 851 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 885
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 792 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 851
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 852 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 886
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD----------KDIEINTVDQYQGRDKSIILYX 52
L +G D IG+I Y Q S L + + +++EI +VD +QGR+K I+
Sbjct: 793 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 852
Query: 53 XXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
LND +RL VA++RA++ +II+G+
Sbjct: 853 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 887
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 6 GIPTDHIG----VIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
GI T + G ++ +N S+ K L K +E+ +VD +QGR+K I+
Sbjct: 719 GIVTPYDGQRSYIVQYMQNNGSMQKDLY-KAVEVASVDAFQGREKDFIILSCVRSSEHQG 777
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ND +RL VA++RAK+ +I+LG+ +V+
Sbjct: 778 IGFVNDPRRLNVALTRAKYGVIVLGNPKVL 807
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 109 (43.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ + V+A Y QV +L+ L ++EI +VD +QGR+K ++
Sbjct: 524 AGVKARDVAVVAPYNLQVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGE 583
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + I+ D + +
Sbjct: 584 VGFLAEDRRINVAVTRARRHVAIICDSRTV 613
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 98 PNTGRYGNLGQIPGTDGNRTN 118
P+ R G G+ PGT G+ TN
Sbjct: 696 PSASRPG--GESPGTKGD-TN 713
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 125 (49.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +++++ LDK+ E++TVD +QGR K +I+
Sbjct: 2331 NIGIITHYKAQKTMIQKDLDKEFDRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIG 2390
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RAK+ L ILG L+ ++
Sbjct: 2391 FLASLQRLNVTITRAKYSLFILGHLRTLV 2419
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+P + VI Y QV LL++ L + ++EI +VD +QGR+K ++
Sbjct: 525 AGVPAGDVAVITPYNLQVDLLRQSLAQRHPELEIKSVDGFQGREKEAVILSFVRSNRKGE 584
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 585 VGFLAEDRRINVAVTRARRHVAVVCDSRTV 614
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+P I V++ Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 528 AGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGE 587
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 588 VGFLAEDRRINVAVTRARRHVAVICDSRTV 617
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VIA Y QV LL++ L ++EI +VD +QGR+K +L
Sbjct: 527 AGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVICDSHTV 616
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 120 (47.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +++++ L+K+ E++TVD +QGR K II+
Sbjct: 2317 NIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIG 2376
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RAK+ L ILG L+ ++
Sbjct: 2377 FLASLQRLNVTITRAKYSLFILGHLRTLM 2405
Score = 33 (16.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 3 LISGIPTDHIGVIAT 17
L G+PTD + V A+
Sbjct: 1430 LSGGVPTDVVMVSAS 1444
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 120 (47.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 27/90 (30%), Positives = 52/90 (57%)
Query: 6 GIPTDHIG----VIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
G+ T + G +++T +N K+ K++E+ +VD +QGR+K I+
Sbjct: 772 GVVTPYEGQRSYIVSTMQN-TGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQG 830
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+D +RL VA++RAK+ ++I+G+ +V+
Sbjct: 831 IGFLSDPRRLNVALTRAKYGVVIIGNPKVL 860
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 123 (48.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +L+++ LDK+ E++TVD +QGR K +I+
Sbjct: 2335 NIGIITHYKAQKTLIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIG 2394
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
L +RL V I+RAK+ L ILG L+ +
Sbjct: 2395 FLASLQRLNVTITRAKYSLFILGHLRTL 2422
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 118 (46.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VIA Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 527 AGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVICDSHTV 616
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 118 (46.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VIA Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 527 AGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVICDSHTV 616
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 118 (46.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VIA Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 527 AGVHAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVICDSRTV 616
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 118 (46.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 8 PTDHIGVIATYRNQVS----LLKRLLDKDIEINTVDQYQGRDKSIIL 50
P+D IG+I+ YR+Q+ L+ RL + +E+NT+D+YQGRDKSII+
Sbjct: 948 PSD-IGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIII 993
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 121 (47.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 12 IGVIATYRNQVSLLKR---------LLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
IG+I+ Y+ Q+ +K +LD +I+ NTVD +QG++K II+
Sbjct: 1697 IGIISPYKEQIRKIKEVFVRKYGKPILD-EIDFNTVDGFQGQEKEIIIMSCVRASATGNV 1755
Query: 63 XILNDRKRLTVAISRAKHKLIILGD 87
L+D +R+ VA++RAK L ILG+
Sbjct: 1756 GFLSDVRRMNVALTRAKTTLWILGN 1780
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 122 (48.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +++++ LDK+ E++TVD +QGR K +I+
Sbjct: 2341 NIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIG 2400
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RAK+ L ILG L+ ++
Sbjct: 2401 FLASLQRLNVTITRAKYSLFILGHLRTLM 2429
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 117 (46.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILY 51
SLI SGI IGVI Y++Q+ L LL K ++++TVD +QG +K II+
Sbjct: 769 SLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIIL 828
Query: 52 XXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDL 88
++ KR+ VA++R K L+I+G+L
Sbjct: 829 SCVRTRQVG---FIDSEKRMNVALTRGKRHLLIVGNL 862
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 121 (47.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 9 TDHIGVIATYRNQVSLLKR--------LLDKDIEINTVDQYQGRDKSIILYX-XXXXXXX 59
T IG+I+ YR Q+ +++ +++K I+ NT+D +QG++K IIL
Sbjct: 1743 TGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTK 1802
Query: 60 XXXXILNDRKRLTVAISRAKHKLIILG 86
L D +R+ VA++RAK + +LG
Sbjct: 1803 SSVGFLKDFRRMNVALTRAKTSIWVLG 1829
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 117 (46.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 29/101 (28%), Positives = 54/101 (53%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
+ + IGVI YR QV +K +LD+ ++++ +V+Q+QG++K +I+
Sbjct: 704 VQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNE 763
Query: 63 X-------ILNDRKRLTVAISRAKHKLIILGDLQVIIAIVN 96
L++ +R VAI+RA L+I+G+ +I +N
Sbjct: 764 FDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMN 804
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 121 (47.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +++++ LDK+ E++TVD +QGR K +I+
Sbjct: 2364 NIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIG 2423
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RAK+ L ILG L+ ++
Sbjct: 2424 FLASLQRLNVTITRAKYSLFILGHLRTLM 2452
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 117 (46.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 6 GIPTDHIG---VIATYRNQVSLLKRLLDKDIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
GI T + G I ++ + L L K IE+ +VD +QGR+K I+
Sbjct: 860 GIITPYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGI 919
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVI 91
L D +RL VA++RA+ LIILG+ +V+
Sbjct: 920 GFLQDPRRLNVALTRARFGLIILGNAKVL 948
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 11 HIGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXX 63
+IG+I Y+ Q +++++ L+K+ E++TVD +QGR K II+
Sbjct: 2318 NIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIG 2377
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RAK+ L ILG L+ ++
Sbjct: 2378 FLASLQRLNVTITRAKYSLFILGHLRTLM 2406
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 2 SLI-SGIPTDHIGVIATYRNQV----SLLKRL-LD----KDIEINTVDQYQGRDKSIILY 51
SLI SG+ IGVI Y++Q+ SLL + +D K +E++TVD +QG +K II+
Sbjct: 764 SLIASGLEGSMIGVITLYKSQMYKICSLLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIIL 823
Query: 52 XXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
++ KR+ VA++R + L+I+G L +
Sbjct: 824 SCVRTRQVG---FIDSEKRMNVALTRGRRHLLIIGSLSCL 860
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILYXX 53
+ SGI +GVI Y++Q+ L+ LL K ++++TVD +QG +K I++
Sbjct: 767 IASGIDGSAVGVITFYKSQMYKLQNLLRSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSC 826
Query: 54 XXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDL 88
+ KR+ VA++RAK L+I+G+L
Sbjct: 827 VRTRQTGFT---DSEKRMNVALTRAKRHLLIVGNL 858
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYXXXXXXX 58
+ D IG++ Y Q LK+ + IEI+++D +QG++K +IL+
Sbjct: 2081 VSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNA 2140
Query: 59 XXXXXILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V ++RAK +I+ GD
Sbjct: 2141 NNELGFLRDARRLNVMLTRAKRGVILFGD 2169
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD--------IEINTVDQYQGRDKSIILYXXXXXXX 58
+ D IG++ Y Q LK+ + IEI+++D +QG++K +IL+
Sbjct: 2081 VSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNA 2140
Query: 59 XXXXXILNDRKRLTVAISRAKHKLIILGD 87
L D +RL V ++RAK +I+ GD
Sbjct: 2141 NNELGFLRDARRLNVMLTRAKRGVILFGD 2169
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 115 (45.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 9 TDHIGVIATYRNQVSLLKRLL---D-KDIEINTVDQYQGRDKSIIL------YXXXXXXX 58
TD IGVI YR QV +K LL D DI++ TV+++QG++ + + Y
Sbjct: 1068 TD-IGVITPYRKQVEKIKFLLRSIDLSDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEE 1126
Query: 59 XXXXXILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+RAK LI++G+ +++
Sbjct: 1127 EYCLGFLSNPKRFNVAITRAKALLIVIGNPHLLV 1160
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 117 (46.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILY 51
SLI SGI IGVI Y++Q+ L LL K ++++TVD +QG +K II+
Sbjct: 1947 SLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIIL 2006
Query: 52 XXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDL 88
++ KR+ VA++R K L+I+G+L
Sbjct: 2007 SCVRTRQVG---FIDSEKRMNVALTRGKRHLLIVGNL 2040
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 113 (44.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILY 51
SLI SGI IGVI Y++Q+ L LL K ++++TVD +QG +K II+
Sbjct: 770 SLIASGIAGSMIGVITLYKSQMYKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIIL 829
Query: 52 XXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDL 88
++ KR+ VA++R + L+I+G+L
Sbjct: 830 SCVRTRQVG---FIDSEKRMNVALTRGRRHLLIVGNL 863
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 114 (45.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXX 57
S+ S + + IGVI YR QV +K LL DI++ +V+++QG++ +I+
Sbjct: 1055 SVSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSN 1114
Query: 58 XXXXXX------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+R K LIILG+ V++
Sbjct: 1115 EDRFEDDRYFLGFLSNSKRFNVAITRPKALLIILGNPHVLV 1155
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXXXX 60
S + + IGVI YR QV +K LL DI++ +V+++QG++ +I+
Sbjct: 421 SQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDR 480
Query: 61 XXX------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+R K LI+LG+ V++
Sbjct: 481 FEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 518
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 2 SLI-SGIPTDHIGVIATYRNQVSLLKRLLD---------KDIEINTVDQYQGRDKSIILY 51
SLI SGI IGVI Y++Q+ L LL K ++++TVD +QG +K II+
Sbjct: 868 SLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIIL 927
Query: 52 XXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDL 88
++ KR+ VA++R + L+I+G+L
Sbjct: 928 SCVRTRQVG---FIDSEKRMNVALTRGRRHLLIVGNL 961
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 115 (45.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 13 GVIATYRNQVSLLKRLLDK------DIEINTVDQYQGRDKSIILYXXXXXXXXXXXXILN 66
G+I Y+ Q++ +K L++ +I ++T+D QG +K II+ L+
Sbjct: 1490 GIITPYKLQMNQIKEQLNRSEHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLS 1549
Query: 67 DRKRLTVAISRAKHKLIILGDLQVI 91
DR+R+ VA++RAK L ++G +V+
Sbjct: 1550 DRRRINVALTRAKLGLYVIGTYKVL 1574
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 112 (44.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VI Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 527 AGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVVCDSRTV 616
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 112 (44.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/101 (30%), Positives = 56/101 (55%)
Query: 8 PTDHIGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
P D IG+IA YR QV +++ L+ KDI++ +V+++QG+++ +I+
Sbjct: 840 PND-IGIIAPYRKQVEKIRKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVN 898
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGDLQVIIA 93
L++ KR VA++RAK LI++G+ VI++
Sbjct: 899 YVKMDQDFNIGFLSNEKRFNVAMTRAKGLLIVVGN-PVILS 938
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLL---DKDIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VI Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 527 AGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGE 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 587 VGFLAEDRRINVAVTRARRHVAVVCDSRTV 616
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 112 (44.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXX 57
S+ S + IGVI YR QV ++ LL DI++ +V+++QG++ +I+
Sbjct: 1053 SISSQVSASDIGVITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSN 1112
Query: 58 XXXXXX------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+R K LI+LG+ V++
Sbjct: 1113 EDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1153
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 110 (43.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 10 DHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXXXXXXXIL 65
+ +G++A Y Q L+ +LL ++E+ +V+ YQGR+K+II+ +
Sbjct: 646 EDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTIII-ASLVKSFTNMGFMC 704
Query: 66 NDRKRLTVAISRAKHKLIILGD 87
N R R+ V +SRAK LI++G+
Sbjct: 705 NPR-RVNVLLSRAKALLILVGN 725
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 114 (45.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 12 IGVIATYRNQVSLLKRLLDK--------DIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
IG+I Y+ Q+ L++ + DIE NT D +QGR+ II++
Sbjct: 1737 IGIITPYKAQLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIG 1796
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVI 91
+ D +R+ V ++RA+ L ILGD + +
Sbjct: 1797 FMTDIRRMNVGLTRARSSLWILGDSRAL 1824
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 111 (44.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXX 57
S+ S + IGVI YR QV +K LL DI++ +V+++QG++ +++
Sbjct: 1056 SVSSQVSARDIGVITPYRKQVEKIKILLRNVDLMDIKVGSVEEFQGQEYLVVIISTVRSN 1115
Query: 58 XXXXXX------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+R K LI+LG+ V++
Sbjct: 1116 EDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1156
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 111 (44.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/104 (27%), Positives = 54/104 (51%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRL-LDKDI---EINTVDQYQGRDKSIILYXXXXXX--- 57
+ + D IG+I Y+ QV +L+ + + D+ +I +V+++QG+++ IIL
Sbjct: 1124 ANVTADQIGIITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEI 1183
Query: 58 ----XXXXXXILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNC 97
+ KRL VA+SRA+ +II G+ ++A+ C
Sbjct: 1184 LRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPH-LLAVDEC 1226
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 109 (43.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 1 MSLI-SGIPTDHIGVIATYRNQVSLLKRLLDK----D-IEINTVDQYQGRDKSIILYXXX 54
+SLI +G+ I V + Y QV LL+ LD D +E+ T+D +QGR+ ++
Sbjct: 823 ISLIYAGVSPMAIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMV 882
Query: 55 XXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVIIAIVNCPNT 100
L D +R+ VAI+RA+ + ++ D I C NT
Sbjct: 883 RSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTI-----CHNT 923
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 109 (43.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDK---DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+G+ I VI Y QV LL++ L ++EI +VD +QGR+K ++
Sbjct: 525 AGVRAADIAVITPYNLQVDLLRQSLAHRLPELEIRSVDGFQGREKEAVILSFVRSNRKGE 584
Query: 62 XXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L + +R+ VA++RA+ + ++ D + +
Sbjct: 585 VGFLAEDRRINVAVTRARRHVAVVCDSRTV 614
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 109 (43.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 3 LISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXXX 58
L + I IGVIA YR QV ++ LL + ++++ +V+++QG++ I++
Sbjct: 976 LYNPISAADIGVIAPYRKQVEKIRVLLQRVGLGEVKVGSVEEFQGQEFLIMILSTVRSNE 1035
Query: 59 XXXXX-------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+RAK LI++G+ V+I
Sbjct: 1036 SLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGNPHVLI 1076
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 110 (43.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 35/100 (35%), Positives = 48/100 (48%)
Query: 1 MSLISGIPTDHIGVIATYRNQVSLLKRLLDKDIEINT----------VDQYQGRDKSIIL 50
M L+ G P I ++ATY Q +L+K +L+ NT VD+YQG I+
Sbjct: 1218 MRLL-GYPASKISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTVDRYQGEQNDYII 1276
Query: 51 YXXXXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQV 90
L D +RLTVA+SRA+ L ILG +V
Sbjct: 1277 LSLTRTRTVGY---LRDVRRLTVALSRARLGLYILGRREV 1313
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 108 (43.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 2 SLISGIPTDHIGVIATYRNQVSLLKRLLDK----DIEINTVDQYQGRDKSIILYXXXXXX 57
S+ S + IGVI YR QV +K LL ++++ +V+++QG++ +I+
Sbjct: 1051 SVSSQVSAGDIGVITPYRKQVEKIKILLRNVGLAEVKVGSVEEFQGQEYLVIIISTVRSN 1110
Query: 58 XXXXXX------ILNDRKRLTVAISRAKHKLIILGDLQVII 92
L++ KR VAI+R K LI+LG+ V++
Sbjct: 1111 EDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLV 1151
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 12 IGVIATYRNQV-SLLKRLLDK---------DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+GVI Y+ QV ++ +R+ DK + + +VD +QG ++ II+
Sbjct: 511 VGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGK 570
Query: 62 XXILNDRKRLTVAISRAKHKLIILGD 87
L++R+R VA++RA+H L ++G+
Sbjct: 571 VGFLSNRQRANVALTRARHCLWVIGN 596
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 109 (43.4 bits), Expect = 0.00011, P = 0.00011
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLD----KDIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
+P+ I ++ TY Q+ L++L+ I+++ VD+YQG + IIL
Sbjct: 1143 LPSQ-ITILTTYTGQLFCLRKLMPVKTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKV 1201
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
L R+ VA+SRAK + +G++Q++ +
Sbjct: 1202 GFLQIPNRICVALSRAKKGMYCIGNMQMLAKV 1233
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 9 TDHIGVIATYRNQVSLLK-RL-------LDKDIEINTVDQYQGRDKSIILYXXXXXXXXX 60
+ + +I+ Y QV K R +K ++INTVD +QGR+K + ++
Sbjct: 644 SSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRANENG 703
Query: 61 XXXILNDRKRLTVAISRAKHKLIILG 86
L++ +R+ V I+RAK ++++G
Sbjct: 704 QIGFLSNSRRMNVGITRAKSSVLVVG 729
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 108 (43.1 bits), Expect = 0.00014, P = 0.00014
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 7 IPTDHIGVIATYRNQVSLLKRLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
+P+ I ++ TY Q+ L++L+ + ++ VD+YQG + IIL
Sbjct: 1150 LPSQ-ITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKV 1208
Query: 63 XILNDRKRLTVAISRAKHKLIILGDLQVIIAI 94
L R+ VA+SRAK + +G++Q++ +
Sbjct: 1209 GFLQISNRICVALSRAKKGMYCIGNMQMLAKV 1240
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 12 IGVIATYRNQVSLLK-RLLDK-----D----IEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+GVI+ Y+ QVS ++ R+ DK D + + +VD +QG ++ II+
Sbjct: 594 VGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGN 653
Query: 62 XXILNDRKRLTVAISRAKHKLIILGD 87
L++R+R VA++RA+H L ++G+
Sbjct: 654 IGFLSNRQRANVALTRARHCLWVIGN 679
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 12 IGVIATYRNQV-SLLKRLLDK--------DIEINTVDQYQGRDKSIILYXXXXXXXXXXX 62
+GV++ Y+ QV ++ +R +K + + +VD +QG ++ II+
Sbjct: 544 VGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKV 603
Query: 63 XILNDRKRLTVAISRAKHKLIILGD 87
LN+R+R VA++RA+H L ++G+
Sbjct: 604 GFLNNRQRANVALTRARHCLWVIGN 628
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 5 SGIPTDHIGVIATYRNQVSLLKRLLDKD-------IEINTVDQYQGRDKSIILYXXXXXX 57
+G+ I + Y Q L++RLL + I++ TVD YQG + ++L
Sbjct: 852 NGVEPQKITCLTFYAAQKDLIERLLSESLNREKHFIKVATVDGYQGEENDVVLLSLVRNN 911
Query: 58 XXXXXXILNDRKRLTVAISRAKHKLIILGDLQVI 91
L+ R+ V++SRA+ L I G+ Q++
Sbjct: 912 DRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQLV 945
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 103 (41.3 bits), Expect = 0.00032, P = 0.00032
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 12 IGVIATYRNQVSLLK----RLLDKD----IEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
+GVI Y+ Q+ LK L +D I INTVD +QG+++ +I+
Sbjct: 1101 VGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDVIIMSCVRASNHGVGF 1160
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
+ D +R+ VA++RAK L ++G+ ++
Sbjct: 1161 VA-DIRRMNVALTRAKRALWVMGNASALM 1188
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 102 (41.0 bits), Expect = 0.00033, P = 0.00033
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 12 IGVIATYRNQVSLLKRLLD--------KDIEINTVDQYQGRDKSIILYXXXXXXXXXXXX 63
+GVI Y+ Q+ LK K+I INTVD +QG+++ +I+
Sbjct: 938 VGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGF 997
Query: 64 ILNDRKRLTVAISRAKHKLIILGDLQVII 92
+ +D +R+ VA++RA+ L ++G+ ++
Sbjct: 998 V-SDIRRMNVALTRARRALWVMGNASALM 1025
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 104 (41.7 bits), Expect = 0.00036, P = 0.00036
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 20 NQVSLLKRLLDKDIEINTVDQYQGRDKS-IILYXXXXXXXXXXXXILNDRKRLTVAISRA 78
N + LK++ ++++I T+D++QG+DK II+ ++ D KR+ VA +RA
Sbjct: 1740 NNQNYLKKI--ENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRA 1797
Query: 79 KHKLIILG 86
K KLI +G
Sbjct: 1798 KKKLIFVG 1805
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 99 (39.9 bits), Expect = 0.00039, P = 0.00039
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 12 IGVIATYRNQV-SLLKRLLDK---------DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+GV++ Y+ Q+ ++ +++ DK + + +VD +QG ++ II+
Sbjct: 527 VGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGK 586
Query: 62 XXILNDRKRLTVAISRAKHKLIILGD 87
LN+R+R VA++RA+H L ++G+
Sbjct: 587 VGFLNNRQRANVALTRARHCLWVIGN 612
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 107 (42.7 bits), Expect = 0.00045, P = 0.00045
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 13 GVIATY---RNQVS-LLKRL-LDKDIEINTVDQYQGRDKSIILYXXXXXXXXXXXXILND 67
G++ Y R ++ K+L L +IEI T+D +QG +K I++ L+D
Sbjct: 3857 GIVTPYKLQRKEIEDAYKQLNLSLNIEIKTIDSFQGSEKDIMIMSCVRNESIG---FLSD 3913
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
R+R+ V+I+RAK+ L I+G+ ++
Sbjct: 3914 RRRINVSITRAKYGLFIIGNATLL 3937
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 99 (39.9 bits), Expect = 0.00050, P = 0.00050
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 12 IGVIATYRNQV-SLLKRLLDK---------DIEINTVDQYQGRDKSIILYXXXXXXXXXX 61
+GV++ Y+ Q+ ++ +++ DK + + +VD +QG ++ II+
Sbjct: 690 VGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGK 749
Query: 62 XXILNDRKRLTVAISRAKHKLIILGD 87
LN+R+R VA++RA+H L ++G+
Sbjct: 750 VGFLNNRQRANVALTRARHCLWVIGN 775
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 102 (41.0 bits), Expect = 0.00056, P = 0.00056
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 13 GVIATYRNQVSLLKRLLDK-----DIEINTVDQYQGRDKSIILYXXXXXXXXXXXXILND 67
G+I Y+ Q S +K + +IE +T+D +QG +K II+ L+D
Sbjct: 1541 GIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQGSEKDIIILSCVRSERIG---FLSD 1597
Query: 68 RKRLTVAISRAKHKLIILGDLQVI 91
R+R+ VA++RAK L ++G+ +++
Sbjct: 1598 RRRINVALTRAKFGLFVIGNSKLL 1621
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 99 (39.9 bits), Expect = 0.00062, P = 0.00062
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 827 VGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LII+G+
Sbjct: 887 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGN 921
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 99 (39.9 bits), Expect = 0.00062, P = 0.00062
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 11 HIGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXX 58
++GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 827 NVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 886
Query: 59 XXXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 887 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 922
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 100 (40.3 bits), Expect = 0.00075, P = 0.00074
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 4 ISGIPTDHIGVIATYRNQVSLLKRLLDKDIEIN----------TVDQYQGRDKSIILYXX 53
I G P + I ++ TY Q L++ + + + N TVD+YQG+ I+
Sbjct: 1218 ILGYPAEKISILTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSL 1277
Query: 54 XXXXXXXXXXILNDRKRLTVAISRAKHKLIILGDLQVII 92
+ D +RL VA+SRA+ L +LG +V +
Sbjct: 1278 VKTRNIGH---IRDVRRLVVALSRARLGLYVLGRSKVFM 1313
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 98 (39.6 bits), Expect = 0.00078, P = 0.00077
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 807 VGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 866
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 867 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 901
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 98 (39.6 bits), Expect = 0.00079, P = 0.00079
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 827 VGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 887 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 921
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 98 (39.6 bits), Expect = 0.00079, P = 0.00079
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 827 VGVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 887 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 921
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 98 (39.6 bits), Expect = 0.00079, P = 0.00079
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 827 VGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 887 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 921
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 98 (39.6 bits), Expect = 0.00079, P = 0.00079
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 12 IGVIATYRNQVSLLK----------RLLD--KDIEINTVDQYQGRDKSIILYXXXXXXXX 59
+GVI+ YR QV ++ R LD KD+++ +V+++QG+++S+IL
Sbjct: 828 VGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 887
Query: 60 XXXX-------ILNDRKRLTVAISRAKHKLIILGD 87
L + KR VA++RAK LI++G+
Sbjct: 888 FVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGN 922
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 102 (41.0 bits), Expect = 0.00081, P = 0.00081
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 12 IGVIATYRNQVSLLKRLLDKDI------EINTVDQYQGRDKS-IILYXXXXXXXXXXXXI 64
IG+I Y Q ++ LD+ E++TVD +QGR+K II+
Sbjct: 2365 IGIITPYSAQKKKIQEELDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGF 2424
Query: 65 LNDRKRLTVAISRAKHKLIILGDLQVII 92
L +RL V I+RA+ L ILG L+ ++
Sbjct: 2425 LASLQRLNVTITRARFSLFILGRLKTLM 2452
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 95 (38.5 bits), Expect = 0.00094, P = 0.00094
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 6 GIPTDHIGVIATYRNQVSLLKRLLDK--------DI---EINTVDQYQGRDKSIILYXXX 54
G+ I +I Y+ Q SL+ +L+++ D I TVD QG++ ++++
Sbjct: 410 GVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMV 469
Query: 55 XXXXXXXXXILNDRKRLTVAISRAKHKLIILGD 87
+++ +RL V I+RAK + +G+
Sbjct: 470 RSNPRKTMGFVSELRRLNVVITRAKRHFMFIGN 502
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.142 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 118 106 0.00091 102 3 11 22 0.42 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 496 (53 KB)
Total size of DFA: 96 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.08u 0.07s 9.15t Elapsed: 00:00:17
Total cpu time: 9.09u 0.07s 9.16t Elapsed: 00:00:17
Start: Thu Aug 15 14:04:19 2013 End: Thu Aug 15 14:04:36 2013
WARNINGS ISSUED: 1