BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13542
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64411|PAO_MAIZE Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1
Length = 500
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLT 125
+L L K V +I + P GV V D + YSAD ++++ SLGVL+S+LI F P LP K+
Sbjct: 258 RLQLNKVVREIKYS-PGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVR 316
Query: 126 AI 127
AI
Sbjct: 317 AI 318
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 15 ENWFETSA-----RGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLL 69
E WF A + D L G G++ + GY V + + K + + L
Sbjct: 196 EAWFAVDANLISLKCWDQDECLSGGHGLMVQ--GYEPVIRTIAKDL----------DIRL 243
Query: 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAI 127
VTK+ V+V GT + AD ++ITV +GVLK+NLI F P LP K +AI
Sbjct: 244 NHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAI 301
>sp|Q8NB78|KDM1B_HUMAN Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B
PE=1 SV=3
Length = 822
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 69 LKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAI 127
LK V I++ + V VT DGT YSA ++L+TV L +L+ I F PPL KK+ AI
Sbjct: 594 LKSPVQCIDYSGDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAI 651
>sp|Q9FNA2|PAO1_ARATH Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1
Length = 472
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 63 LSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPK 122
L +L L + V ++ + GVVV DG+ Y A+ ++++ S+GVL+S+L++F P LP
Sbjct: 203 LDYRLKLNQVVREVQ-QSRNGVVVKTEDGSVYEANYVIVSASIGVLQSDLLSFQPLLPRW 261
Query: 123 KLTAIE 128
K AI+
Sbjct: 262 KTEAIQ 267
>sp|Q9SU79|PAO5_ARATH Probable polyamine oxidase 5 OS=Arabidopsis thaliana GN=PAO5 PE=2
SV=1
Length = 533
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Query: 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILIT 102
GY +V L +P Q I L++K VTKI W+ + V + +DG+ AD +++T
Sbjct: 239 GYLSVIHHLASVLP-QGVIQLNRK------VTKIEWQSNE-VKLHFSDGSVVFADHVIVT 290
Query: 103 VSLGVLKSNLIT----FVPPLPPKKLTAI 127
VSLGVLK+ + T F PPLP K AI
Sbjct: 291 VSLGVLKAGIETDAELFSPPLPDFKSDAI 319
>sp|Q6QHF9|PAOX_HUMAN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens
GN=PAOX PE=1 SV=3
Length = 649
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 18/96 (18%)
Query: 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE----------DPKGVVVTCADGT 92
GY + +M +P T ++ +K V I+W + V V C DG
Sbjct: 362 GYQGLTNCMMAALPEDT-------VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGD 414
Query: 93 QYSADRILITVSLGVLKSNLITFV-PPLPPKKLTAI 127
++ A +++TV LG L+ +L TF PPLP +K AI
Sbjct: 415 RFPAHHVIVTVPLGFLREHLDTFFDPPLPAEKAEAI 450
>sp|O96570|A37C_DROLE Protein anon-37Cs OS=Drosophila lebanonensis GN=anon-37Cs PE=3 SV=1
Length = 544
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 86 VTCADGTQYSADRILITVSLGVLKS-NLITFVPPLPPKKLTAI 127
V C DGT YSAD I+ T+ LGVLK+ + I F P LP +KL AI
Sbjct: 311 VACLDGTLYSADHIICTLPLGVLKNFSAILFKPALPLEKLQAI 353
>sp|Q9LYT1|PAO3_ARATH Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1
Length = 488
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 15 ENWF----ET-SARGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLL 69
E WF ET SA+ D L G G++ + GY V L K + + L
Sbjct: 196 EGWFAADAETISAKCWDQEELLPGGHGLMVR--GYRPVINTLSKGL----------DIRL 243
Query: 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAI 127
+TKI+ GV VT G + AD +I + LGVLKS +ITF P LP K AI
Sbjct: 244 SHRITKIS-RRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQWKQEAI 300
>sp|Q6YYZ1|LDL2_ORYSJ Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa
subsp. japonica GN=Os08g0143400 PE=2 SV=1
Length = 763
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 67 LLLKKEVTKI-NWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLT 125
+L +K V +I + ED GV +T G + AD L T LGVLKS I F P LP +KL
Sbjct: 369 VLYEKTVKRIEHGED--GVSITVEGGQVFKADMALCTAPLGVLKSRSIIFEPELPERKLE 426
Query: 126 AIE 128
AI+
Sbjct: 427 AIQ 429
>sp|Q8CIG3|KDM1B_MOUSE Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1b
PE=1 SV=1
Length = 826
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 69 LKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAI 127
LK V I++ + V VT DG +SA ++L+TV L +L+ I F PPL KK+ AI
Sbjct: 600 LKSPVQSIDYTGDE-VQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAI 657
>sp|Q9CAE3|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis
thaliana GN=FLD PE=1 SV=1
Length = 789
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 42 GGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILI 101
GG G + + L + +P +L +K V I + GV VT A Y D +L
Sbjct: 378 GGNGRLVQALAENVP----------ILYEKTVQTIRY-GSNGVKVT-AGNQVYEGDMVLC 425
Query: 102 TVSLGVLKSNLITFVPPLPPKKLTAIE 128
TV LGVLK+ I FVP LP +KL I+
Sbjct: 426 TVPLGVLKNGSIKFVPELPQRKLDCIK 452
>sp|P18487|A37C_DROME Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2 SV=3
Length = 504
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILIT 102
G NV L++ M +L K V +I W V C DG+ Y+AD I+ T
Sbjct: 239 GLDNVVDDLIQNMD-------KAQLQTGKPVGQIQWTPAPMKSVGCLDGSLYNADHIICT 291
Query: 103 VSLGVLKSNL-ITFVPPLPPKKLTAI 127
+ LGVLKS + F P LP K+ AI
Sbjct: 292 LPLGVLKSFAGVLFRPTLPLDKMLAI 317
>sp|O96566|A37C_DROSI Protein anon-37Cs (Fragment) OS=Drosophila simulans GN=anon-37Cs
PE=3 SV=1
Length = 501
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNL-ITFVPPLPPKKL 124
+L K V +I W V C DG+ Y+AD I+ T+ LGVLKS + F P LP K+
Sbjct: 252 QLQTGKPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVLFRPTLPLDKM 311
Query: 125 TAI 127
AI
Sbjct: 312 LAI 314
>sp|Q8C0L6|PAOX_MOUSE Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Mus musculus
GN=Paox PE=1 SV=3
Length = 504
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 42 GGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE----------DPKGVVVTCADG 91
GGY + ++ +P T + K V I+W + V+V C DG
Sbjct: 216 GGYQGLTDRILASLPKDT-------VAFDKPVKTIHWNGSFQEAAFPGETFPVLVECEDG 268
Query: 92 TQYSADRILITVSLGVLKSNLITFV-PPLPPKKLTAIE 128
+ A +++TV LG LK + TF PPLP KK AI+
Sbjct: 269 ARLPAHHVIVTVPLGFLKEHQDTFFEPPLPAKKAEAIK 306
>sp|P50264|FMS1_YEAST Polyamine oxidase FMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FMS1 PE=1 SV=1
Length = 508
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 67 LLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVL------KSNL---ITFVP 117
L L EV I E K V V C DGT Y+AD ++ITV VL + NL I F P
Sbjct: 217 LKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQP 276
Query: 118 PLPP 121
PL P
Sbjct: 277 PLKP 280
>sp|Q99K82|SMOX_MOUSE Spermine oxidase OS=Mus musculus GN=Smox PE=1 SV=1
Length = 555
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 79 EDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPP-LPPKKLTAI 127
++P VVV C D AD +++TVSLGVLK +F P LP +K+ AI
Sbjct: 308 DEPWPVVVECEDCEVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAI 357
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 15 ENWF----ET-SARGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLL 69
E WF ET SA+ D L G G++ + GY V L K + D+ +
Sbjct: 195 EGWFAADAETISAKCWDQEELLPGGHGLMVR--GYRPVINTLAKGL------DIRVGHRV 246
Query: 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAI 127
K V + N GV VT +G + AD +I V LGVLKS I F P LP K AI
Sbjct: 247 TKIVRRYN-----GVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAI 299
>sp|Q865R1|PAOX_BOVIN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus
GN=PAOX PE=1 SV=3
Length = 512
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE----------DPKGVVVTCADGT 92
GY + +M +P ++ K V I+W + V+V C DG
Sbjct: 225 GYQGLTDCIMASLPKDV-------MVFDKPVKTIHWNGSFREASAPGETFPVLVECEDGD 277
Query: 93 QYSADRILITVSLGVLKSNLITFV-PPLPPKKLTAI 127
+ A +++TV LG K +L TF PPLP +K+ AI
Sbjct: 278 CFPAHHVVVTVPLGFFKKHLDTFFEPPLPTEKVEAI 313
>sp|Q9Y802|LSD1_SCHPO Lysine-specific histone demethylase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lsd1 PE=1 SV=1
Length = 1000
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 67 LLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTA 126
+L + V + ED V ++ + T S D+++I + + L ++LITF PPL KKL A
Sbjct: 535 ILFDQCVHTVKLED-NTVNLSFVNETTVSVDKVVICIPMDKLNTHLITFEPPLEEKKLKA 593
Query: 127 IELTNLTSIQQ 137
I+ + T++++
Sbjct: 594 IDRCHFTNVKK 604
>sp|Q9NWM0|SMOX_HUMAN Spermine oxidase OS=Homo sapiens GN=SMOX PE=1 SV=1
Length = 555
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 78 WEDPK--GVVVTCADGTQYSADRILITVSLGVLKSNLITFVPP-LPPKKLTAI 127
W++ + VVV C D AD +++TVSLGVLK +F P LP +K+ AI
Sbjct: 305 WDEDEQWSVVVECEDCELIPADHVIVTVSLGVLKRQYTSFFRPGLPTEKVAAI 357
>sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa
subsp. japonica GN=Os02g0755200 PE=2 SV=1
Length = 849
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 90 DGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIE 128
D + D +L TV LGVLK I FVP LP +K AIE
Sbjct: 508 DKQTFRGDMVLCTVPLGVLKKGNIQFVPELPAQKREAIE 546
>sp|Q9LID0|LDL2_ARATH Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis
thaliana GN=LDL2 PE=2 SV=1
Length = 746
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 67 LLLKKEVTKINWEDPKGVVVTCADGTQ-YSADRILITVSLGVLKSNLITFVPPLPPKKLT 125
++ K V I + D V++ G+Q + AD IL TV LGVLK I F P LP +K
Sbjct: 368 IIYGKSVDTIKYGDGGVEVIS---GSQIFQADMILCTVPLGVLKKRSIKFEPELPRRKQA 424
Query: 126 AIE 128
AI+
Sbjct: 425 AID 427
>sp|Q7XUR2|LDL3_ORYSJ Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa
subsp. japonica GN=Os04g0560300 PE=2 SV=2
Length = 811
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 94 YSADRILITVSLGVLKSNLITFVPPLPPKKLTAIE 128
Y D L TV LGVLK+ + FVP LP +KL +I+
Sbjct: 432 YEGDMALCTVPLGVLKNGGVKFVPELPQRKLDSIK 466
>sp|Q01H90|LDL3_ORYSI Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa
subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1
Length = 811
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 94 YSADRILITVSLGVLKSNLITFVPPLPPKKLTAIE 128
Y D L TV LGVLK+ + FVP LP +KL +I+
Sbjct: 432 YEGDMALCTVPLGVLKNGGVKFVPELPQRKLDSIK 466
>sp|Q21988|AMX1_CAEEL Amine oxidase family member 1 OS=Caenorhabditis elegans GN=amx-1
PE=3 SV=3
Length = 824
Score = 37.4 bits (85), Expect = 0.032, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 73 VTKINW-EDPKGVVVTCADGTQYSA--DRILITVSLGVLKSN-LITFVPPLPPKKLTAIE 128
V I+W D + V + + Q + D+++IT SL VLKSN FVPPLP +K AI+
Sbjct: 579 VKCIDWGRDDRKVKIFFENAEQAAEEFDKVVITTSLSVLKSNHSKMFVPPLPIEKQKAID 638
>sp|B5U6Y8|OXLA_ECHOC L-amino-acid oxidase OS=Echis ocellatus PE=1 SV=1
Length = 504
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKI--NWEDPKGVVVTCADG-TQYSADRILITVSLGVL 108
M Q+P + K +L K VTKI N E + T A + +AD +++ +
Sbjct: 258 MDQLPTSMYRAIEKSVLFKARVTKIQQNAEKVRVTYQTAAKTLSDVTADYVIVCTTSRAA 317
Query: 109 KSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 318 RR--INFKPPLPPKKAHAL 334
>sp|Q8VXV7|LDL1_ARATH Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis
thaliana GN=LDL1 PE=1 SV=1
Length = 844
Score = 35.8 bits (81), Expect = 0.091, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 83 GVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIE 128
GV+V + ++ D L TV LGVLK I F P LP KK AI+
Sbjct: 492 GVLVYTGN-KEFHCDMALCTVPLGVLKKGSIEFYPELPHKKKEAIQ 536
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 94 YSADRILITVSLGVLKSN--LITFVPPLPPKKLTAIE 128
Y D +L T+ LGVLK + FVPPLP K +A++
Sbjct: 617 YKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQ 653
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 94 YSADRILITVSLGVLKSN--LITFVPPLPPKKLTAIE 128
Y D +L T+ LGVLK + FVPPLP K +A++
Sbjct: 616 YKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQ 652
>sp|Q9VW97|LSDA_DROME Possible lysine-specific histone demethylase 1 OS=Drosophila
melanogaster GN=Su(var)3-3 PE=1 SV=1
Length = 890
Score = 33.5 bits (75), Expect = 0.51, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 10/45 (22%)
Query: 94 YSADRILITVSLGVLK----------SNLITFVPPLPPKKLTAIE 128
Y AD ++ T++LGVLK SN + F PPLP K AI+
Sbjct: 609 YKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIK 653
>sp|P81382|OXLA_CALRH L-amino-acid oxidase OS=Calloselasma rhodostoma PE=1 SV=2
Length = 516
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVV---TCADGTQYSADRILITVSLGVL 108
M ++P D+ K+ +V KI D K VV + +AD +++ + +
Sbjct: 258 MDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAV 317
Query: 109 KSNLITFVPPLPPKKLTAI 127
+ LI F PPL PKK A+
Sbjct: 318 R--LIKFNPPLLPKKAHAL 334
>sp|A8QL51|OXLA_BUNMU L-amino-acid oxidase OS=Bungarus multicinctus PE=2 SV=1
Length = 517
Score = 32.7 bits (73), Expect = 0.89, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 54 QMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVV--TCADGTQY-SADRILITVSLGVLKS 110
Q+P D+++ + L +VTKI + K V T A Y +AD +++ + ++
Sbjct: 261 QLPKSMHQDIAEMVHLNAQVTKIQHDAEKVRVAYQTPAKTLSYVTADYVIVCATSRAVRR 320
Query: 111 NLITFVPPLPPKKLTAI 127
I+F PPLP KK A+
Sbjct: 321 --ISFEPPLPSKKAHAL 335
>sp|B5AR80|OXLA_BOTPA L-amino-acid oxidase (Fragment) OS=Bothropoides pauloensis PE=1
SV=1
Length = 503
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVT----CADGTQYSADRILITVSLGV 107
M ++P + +K+ L V KI +D K V VT + +AD +++ +
Sbjct: 258 MDKLPTSMYQAIQEKVRLNVRVIKIQ-QDVKEVTVTYQTSAKETLSVTADYVIVCTTSRA 316
Query: 108 LKSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 317 ARR--IKFEPPLPPKKAHAL 334
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 36 GVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYS 95
G+ + GG G + K L + ++ KLL K VTKI +D K V V ++G ++
Sbjct: 289 GINYPVGGVGGIAKALANGL-----VNKGSKLLYKANVTKILLKDGKAVGVKLSNGREFF 343
Query: 96 ADRIL 100
A ++
Sbjct: 344 AKTVI 348
>sp|Q4JHE1|OXLA_PSEAU L-amino-acid oxidase OS=Pseudechis australis PE=1 SV=1
Length = 517
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 54 QMPGQTPIDLSKKLLLKKEVTKI--NWEDPKGVVVTCADGTQYS-ADRILITVSLGVLKS 110
Q+P +++K+ L +V KI N ED + T A Y AD +++ + +
Sbjct: 261 QLPRSMYQAIAEKVHLNAQVIKIQQNAEDVRVTYQTPAKTLSYVIADYVIVCSTSRAARR 320
Query: 111 NLITFVPPLPPKKLTAI 127
I F PPLPPKK A+
Sbjct: 321 --IHFEPPLPPKKAHAL 335
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 36 GVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYS 95
G+ + GG G + K L + ++ KLL K VTKI +D K V V ++G ++
Sbjct: 289 GINYPVGGVGGIAKALANGL-----VNKGSKLLYKANVTKILLKDGKAVGVKLSNGREFF 343
Query: 96 ADRIL 100
A ++
Sbjct: 344 AKTVI 348
>sp|Q6TGQ8|OXLA_BOTMO L-amino-acid oxidase (Fragment) OS=Bothrops moojeni PE=1 SV=1
Length = 478
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQ----YSADRILITVSLGV 107
M ++P + +K+ L V KI +D K V VT + +AD +++ +
Sbjct: 246 MDKLPTSMYQAIQEKVHLNARVIKIQ-QDVKEVTVTYQTSEKETLSVTADYVIVCTTSRA 304
Query: 108 LKSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 305 ARR--IKFEPPLPPKKAHAL 322
>sp|Q6TGQ9|OXLA_BOTJR L-amino-acid oxidase (Fragment) OS=Bothrops jararacussu PE=1 SV=1
Length = 497
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQ----YSADRILITVSLGV 107
M ++P + +K+ L V KI +D K V VT + +AD +++ +
Sbjct: 253 MDKLPTSMYQAIQEKVHLNARVIKIQ-QDVKEVTVTYQTSEKETLSVTADYVIVCTTSRA 311
Query: 108 LKSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 312 ARR--IKFEPPLPPKKAHAL 329
>sp|Q9XWP6|LSD1_CAEEL Probable lysine-specific histone demethylase 1 OS=Caenorhabditis
elegans GN=spr-5 PE=1 SV=1
Length = 770
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 51 LMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC----ADGTQYSADRILITVSLG 106
L+ Q+ + +D+ LK V I++ + V++ D + A ++ T+ +G
Sbjct: 427 LLTQLSEKRKLDIR----LKHRVLDIDYSGFEHVLLKVQRENGDIEEMKAAFVVSTLPIG 482
Query: 107 VLKSNLI------TFVPPLPPKKLTAIELTNLTSIQQ 137
VLK +I TF P LP KK+ AI S+ +
Sbjct: 483 VLKKTIIADERAPTFTPSLPDKKVEAIRNIGCGSVNK 519
>sp|P0DJ28|SSLA2_DICDI Suppresor of smlA OS=Dictyostelium discoideum GN=sslA2 PE=4 SV=1
Length = 578
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 58 QTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD 90
Q+P + S K LL +K NWEDP+ ++ C D
Sbjct: 232 QSPFN-SLKTLLDNLHSKYNWEDPRNNLIVCCD 263
>sp|P0DJ29|SSLA1_DICDI Suppresor of smlA OS=Dictyostelium discoideum GN=sslA1 PE=2 SV=1
Length = 578
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 58 QTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD 90
Q+P + S K LL +K NWEDP+ ++ C D
Sbjct: 232 QSPFN-SLKTLLDNLHSKYNWEDPRNNLIVCCD 263
>sp|Q6STF1|OXLA_GLOHA L-amino-acid oxidase OS=Gloydius halys PE=1 SV=1
Length = 504
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVV---TCADGTQYSADRILITVSLGVL 108
M ++P + +K+ L +V KI K VV + +AD +++ +
Sbjct: 258 MDKLPTSMYRAIEEKVHLNAQVIKIQKNAEKVTVVYQTPAKEMASVTADYVIVCTTSRAT 317
Query: 109 KSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 318 RR--IKFEPPLPPKKAHAL 334
>sp|Q90W54|OXLA_GLOBL L-amino-acid oxidase OS=Gloydius blomhoffii PE=1 SV=1
Length = 504
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 52 MKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVV---TCADGTQYSADRILITVSLGVL 108
M ++P + +K+ L +V KI K VV + +AD +++ +
Sbjct: 258 MDKLPTSMYRAIEEKVHLNAQVIKIQKNAEKVTVVYQTPAKEMASVTADYVIVCTTSRAT 317
Query: 109 KSNLITFVPPLPPKKLTAI 127
+ I F PPLPPKK A+
Sbjct: 318 RR--IKFEPPLPPKKAHAL 334
>sp|Q10135|LSD2_SCHPO Lysine-specific histone demethylase 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lsd2 PE=1 SV=1
Length = 1273
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLP 120
+K V+K+ E+ K + C D + Y D+++I S SN I F P LP
Sbjct: 797 EKFVSKVTIENDK-CTLDCKDNSSYEVDQVVIACSPSHFSSN-IEFSPGLP 845
>sp|Q0DJS1|TOR_ORYSJ Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica
GN=TOR PE=2 SV=3
Length = 2465
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query: 44 YGNVFKLLMKQMPGQTPIDL---SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRIL 100
Y +VF+ + KQ+P T +DL S +LL E K+ P GT YSAD L
Sbjct: 1999 YYHVFRRIDKQLPSLTTLDLHSVSPELL---ECRKLELAVP---------GT-YSADAPL 2045
Query: 101 ITVSLGVLKSNLITFVPPLPPKKLT 125
+T+ V LI P+KLT
Sbjct: 2046 VTIEYFV--PQLIVITSKQRPRKLT 2068
>sp|P54978|CRTI_PARSN Phytoene desaturase (lycopene-forming) OS=Paracoccus sp. (strain
N81106 / MBIC 01143) GN=crtI PE=3 SV=2
Length = 501
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 36 GVVWKKGGYGNVFK---LLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGT 92
GV + KGG + L +++ GQ +LL +V +I+ + P+ VT ADG
Sbjct: 219 GVWFAKGGTNQLVAGMVALFERLGGQ--------MLLNAKVARIDTDGPRATGVTLADGR 270
Query: 93 QYSADRI 99
+AD +
Sbjct: 271 ALTADMV 277
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,666,348
Number of Sequences: 539616
Number of extensions: 2210494
Number of successful extensions: 5059
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5025
Number of HSP's gapped (non-prelim): 51
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)