Query psy13542
Match_columns 147
No_of_seqs 154 out of 1102
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 21:57:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 99.8 5.9E-19 2E-23 150.6 9.3 121 12-146 368-498 (662)
2 2xag_A Lysine-specific histone 99.7 3.6E-18 1.2E-22 149.4 8.7 120 13-146 540-669 (852)
3 1rsg_A FMS1 protein; FAD bindi 99.7 3.7E-17 1.3E-21 135.2 12.4 120 14-146 176-304 (516)
4 1s3e_A Amine oxidase [flavin-c 99.7 3.1E-17 1E-21 135.6 10.5 125 9-146 169-304 (520)
5 2vvm_A Monoamine oxidase N; FA 99.7 6.3E-17 2.2E-21 132.7 9.9 130 7-146 209-348 (495)
6 4gut_A Lysine-specific histone 99.7 3.4E-16 1.1E-20 135.9 12.8 121 12-146 500-623 (776)
7 1b37_A Protein (polyamine oxid 99.7 3.5E-16 1.2E-20 127.9 11.2 131 14-146 172-308 (472)
8 2yg5_A Putrescine oxidase; oxi 99.7 1.6E-16 5.6E-21 128.6 8.1 123 10-146 170-304 (453)
9 2iid_A L-amino-acid oxidase; f 99.7 5.3E-16 1.8E-20 127.2 10.7 95 40-146 236-334 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 99.6 2.5E-15 8.6E-20 120.8 8.9 123 11-146 166-295 (431)
11 2jae_A L-amino acid oxidase; o 99.6 1.1E-14 3.8E-19 119.2 9.7 94 40-146 234-330 (489)
12 3ayj_A Pro-enzyme of L-phenyla 99.5 1.1E-14 3.7E-19 125.4 7.2 121 15-143 317-483 (721)
13 3i6d_A Protoporphyrinogen oxid 99.5 2.3E-13 7.7E-18 109.9 11.7 92 40-146 230-321 (470)
14 2ivd_A PPO, PPOX, protoporphyr 99.5 7.3E-14 2.5E-18 113.7 8.0 93 40-146 233-328 (478)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 2.6E-13 8.9E-18 106.3 9.9 97 40-146 107-203 (342)
16 3lov_A Protoporphyrinogen oxid 99.4 3.3E-13 1.1E-17 109.9 9.7 90 40-146 231-320 (475)
17 2e1m_B L-glutamate oxidase; L- 99.4 4.7E-13 1.6E-17 92.9 5.5 52 92-146 4-55 (130)
18 4dsg_A UDP-galactopyranose mut 99.4 3.7E-12 1.3E-16 105.0 10.5 126 10-146 161-308 (484)
19 3nks_A Protoporphyrinogen oxid 99.4 7.4E-13 2.5E-17 107.6 6.1 95 40-146 229-324 (477)
20 1sez_A Protoporphyrinogen oxid 99.3 5.2E-12 1.8E-16 103.5 6.4 94 40-145 238-343 (504)
21 3ka7_A Oxidoreductase; structu 99.2 1.4E-11 4.7E-16 98.6 7.8 125 11-146 161-291 (425)
22 4dgk_A Phytoene dehydrogenase; 99.2 2.7E-11 9.1E-16 99.1 6.9 118 14-140 192-311 (501)
23 3nrn_A Uncharacterized protein 99.2 6.3E-11 2.2E-15 95.1 8.2 122 12-146 155-279 (421)
24 4gde_A UDP-galactopyranose mut 99.1 6.3E-10 2.2E-14 90.8 9.6 119 11-144 168-306 (513)
25 2b9w_A Putative aminooxidase; 99.0 1.3E-09 4.3E-14 87.4 9.3 106 12-135 169-281 (424)
26 1yvv_A Amine oxidase, flavin-c 98.7 1.6E-07 5.3E-12 72.5 11.5 90 40-146 105-195 (336)
27 1v0j_A UDP-galactopyranose mut 98.2 1E-07 3.4E-12 76.5 -1.0 102 9-144 162-271 (399)
28 1d5t_A Guanine nucleotide diss 98.1 1.6E-06 5.3E-11 70.3 3.0 63 39-107 228-290 (433)
29 3p1w_A Rabgdi protein; GDI RAB 98.0 6.3E-06 2.1E-10 68.0 6.2 64 36-104 247-311 (475)
30 1vg0_A RAB proteins geranylger 98.0 3.2E-05 1.1E-09 66.0 9.1 60 38-102 371-432 (650)
31 2bcg_G Secretory pathway GDP d 97.9 6.3E-06 2.2E-10 67.0 4.1 60 40-106 237-299 (453)
32 2bi7_A UDP-galactopyranose mut 97.9 6.2E-06 2.1E-10 65.8 3.6 80 8-111 155-242 (384)
33 1i8t_A UDP-galactopyranose mut 97.8 4.4E-06 1.5E-10 66.3 1.7 101 7-144 150-257 (367)
34 3hdq_A UDP-galactopyranose mut 97.5 6.1E-05 2.1E-09 60.8 4.1 97 8-140 179-282 (397)
35 2e1m_A L-glutamate oxidase; L- 97.4 0.00013 4.3E-09 58.5 4.7 75 19-103 293-369 (376)
36 3dje_A Fructosyl amine: oxygen 97.0 0.00099 3.4E-08 53.1 5.5 58 44-107 160-221 (438)
37 3nyc_A D-arginine dehydrogenas 96.9 0.00077 2.6E-08 52.3 4.2 55 45-106 154-208 (381)
38 3dme_A Conserved exported prot 96.8 0.002 6.7E-08 49.6 5.7 58 44-107 149-209 (369)
39 3ps9_A TRNA 5-methylaminomethy 96.7 0.0018 6.2E-08 55.0 5.6 57 45-107 417-473 (676)
40 3pvc_A TRNA 5-methylaminomethy 96.7 0.0023 8E-08 54.5 5.7 56 45-106 412-468 (689)
41 2uzz_A N-methyl-L-tryptophan o 96.5 0.0043 1.5E-07 48.0 5.9 56 45-107 149-204 (372)
42 1y56_B Sarcosine oxidase; dehy 96.4 0.005 1.7E-07 47.9 5.8 55 45-106 149-204 (382)
43 4hb9_A Similarities with proba 96.4 0.011 3.7E-07 46.0 7.5 53 45-105 112-164 (412)
44 2xdo_A TETX2 protein; tetracyc 96.4 0.0098 3.4E-07 46.9 7.3 55 45-107 128-182 (398)
45 3v76_A Flavoprotein; structura 96.4 0.0043 1.5E-07 50.0 5.2 59 41-106 128-186 (417)
46 1ryi_A Glycine oxidase; flavop 96.3 0.0035 1.2E-07 48.7 4.4 55 45-106 164-218 (382)
47 2vou_A 2,6-dihydroxypyridine h 96.3 0.011 3.7E-07 46.6 7.2 56 43-106 97-152 (397)
48 2oln_A NIKD protein; flavoprot 96.3 0.0048 1.6E-07 48.4 5.1 55 45-106 153-207 (397)
49 2i0z_A NAD(FAD)-utilizing dehy 96.3 0.0056 1.9E-07 49.4 5.4 57 43-105 132-189 (447)
50 2gf3_A MSOX, monomeric sarcosi 96.3 0.0056 1.9E-07 47.6 5.3 55 45-106 150-204 (389)
51 2v3a_A Rubredoxin reductase; a 96.1 0.011 3.9E-07 46.4 6.4 54 45-104 187-240 (384)
52 3rp8_A Flavoprotein monooxygen 96.0 0.011 3.8E-07 46.6 5.9 54 45-106 127-180 (407)
53 2ywl_A Thioredoxin reductase r 96.0 0.0081 2.8E-07 41.9 4.5 53 45-105 56-108 (180)
54 3nlc_A Uncharacterized protein 96.0 0.011 3.9E-07 49.4 6.1 57 45-107 220-277 (549)
55 1xdi_A RV3303C-LPDA; reductase 96.0 0.014 4.7E-07 47.7 6.4 41 64-105 237-277 (499)
56 3iwa_A FAD-dependent pyridine 96.0 0.013 4.4E-07 47.4 6.2 55 45-105 202-256 (472)
57 3o0h_A Glutathione reductase; 95.9 0.011 3.8E-07 48.0 5.7 41 64-105 246-286 (484)
58 3lxd_A FAD-dependent pyridine 95.8 0.018 6.1E-07 45.7 6.4 54 46-105 195-249 (415)
59 2gqf_A Hypothetical protein HI 95.8 0.011 3.8E-07 47.2 5.1 56 43-105 107-166 (401)
60 3oc4_A Oxidoreductase, pyridin 95.6 0.03 1E-06 45.1 7.0 54 45-105 189-242 (452)
61 3fg2_P Putative rubredoxin red 95.6 0.021 7.3E-07 45.2 6.0 55 45-105 184-239 (404)
62 1m6i_A Programmed cell death p 95.5 0.028 9.5E-07 45.9 6.6 53 47-105 228-280 (493)
63 2x3n_A Probable FAD-dependent 95.5 0.031 1.1E-06 43.8 6.6 57 45-106 107-165 (399)
64 2yqu_A 2-oxoglutarate dehydrog 95.4 0.019 6.6E-07 46.1 5.2 55 45-105 208-262 (455)
65 2gag_B Heterotetrameric sarcos 95.3 0.021 7.3E-07 44.5 5.1 54 46-106 175-229 (405)
66 1fec_A Trypanothione reductase 95.3 0.035 1.2E-06 45.3 6.4 52 47-104 233-285 (490)
67 1mo9_A ORF3; nucleotide bindin 95.3 0.024 8.1E-07 46.7 5.3 53 46-104 256-313 (523)
68 2zbw_A Thioredoxin reductase; 95.2 0.031 1.1E-06 42.5 5.6 55 45-105 65-119 (335)
69 3ab1_A Ferredoxin--NADP reduct 95.2 0.047 1.6E-06 42.1 6.6 55 45-105 74-129 (360)
70 3ef6_A Toluene 1,2-dioxygenase 95.2 0.024 8.3E-07 45.0 5.0 41 64-105 199-239 (410)
71 2wpf_A Trypanothione reductase 95.1 0.042 1.4E-06 44.9 6.4 40 64-104 249-289 (495)
72 2r9z_A Glutathione amide reduc 95.0 0.04 1.4E-06 44.6 5.9 40 64-104 221-261 (463)
73 4a9w_A Monooxygenase; baeyer-v 95.0 0.06 2.1E-06 40.8 6.5 40 65-106 91-131 (357)
74 1ges_A Glutathione reductase; 94.8 0.045 1.6E-06 44.0 5.8 40 64-104 222-262 (450)
75 3lzw_A Ferredoxin--NADP reduct 94.8 0.067 2.3E-06 40.3 6.4 55 44-105 66-121 (332)
76 1pj5_A N,N-dimethylglycine oxi 94.7 0.039 1.3E-06 47.9 5.3 56 45-107 151-207 (830)
77 4dna_A Probable glutathione re 94.7 0.052 1.8E-06 43.7 5.7 53 46-105 212-266 (463)
78 1onf_A GR, grase, glutathione 94.7 0.069 2.4E-06 43.6 6.5 54 46-105 218-273 (500)
79 2hqm_A GR, grase, glutathione 94.6 0.049 1.7E-06 44.2 5.5 40 64-104 240-282 (479)
80 2qa2_A CABE, polyketide oxygen 94.4 0.054 1.8E-06 44.4 5.3 56 45-106 107-165 (499)
81 3c4n_A Uncharacterized protein 94.4 0.019 6.6E-07 45.4 2.5 55 45-106 172-235 (405)
82 4ap3_A Steroid monooxygenase; 94.4 0.1 3.5E-06 43.4 7.0 40 66-105 117-157 (549)
83 1k0i_A P-hydroxybenzoate hydro 94.3 0.057 1.9E-06 42.1 5.1 57 45-106 103-162 (394)
84 2gv8_A Monooxygenase; FMO, FAD 94.3 0.056 1.9E-06 43.3 5.2 41 65-106 130-176 (447)
85 3d1c_A Flavin-containing putat 94.3 0.15 5.2E-06 39.1 7.4 40 65-106 103-142 (369)
86 1w4x_A Phenylacetone monooxyge 94.3 0.11 3.7E-06 42.9 6.9 41 65-105 111-152 (542)
87 3f8d_A Thioredoxin reductase ( 94.2 0.091 3.1E-06 39.3 5.9 55 45-106 70-124 (323)
88 3gwf_A Cyclohexanone monooxyge 94.2 0.11 3.8E-06 43.0 6.8 40 66-105 105-145 (540)
89 1fl2_A Alkyl hydroperoxide red 94.1 0.12 4E-06 38.8 6.3 56 45-105 56-113 (310)
90 2qa1_A PGAE, polyketide oxygen 94.1 0.056 1.9E-06 44.3 4.8 56 45-106 106-164 (500)
91 2qae_A Lipoamide, dihydrolipoy 94.1 0.084 2.9E-06 42.5 5.7 40 64-104 230-273 (468)
92 2cdu_A NADPH oxidase; flavoenz 94.1 0.084 2.9E-06 42.3 5.7 55 45-105 191-245 (452)
93 3lad_A Dihydrolipoamide dehydr 94.0 0.087 3E-06 42.5 5.8 54 46-105 222-278 (476)
94 1ojt_A Surface protein; redox- 93.9 0.068 2.3E-06 43.3 4.9 53 46-104 227-283 (482)
95 3alj_A 2-methyl-3-hydroxypyrid 93.9 0.096 3.3E-06 40.8 5.6 53 45-106 107-159 (379)
96 3fbs_A Oxidoreductase; structu 93.8 0.13 4.5E-06 38.0 6.0 56 44-105 55-110 (297)
97 3axb_A Putative oxidoreductase 93.8 0.057 1.9E-06 43.0 4.2 56 45-106 181-253 (448)
98 1trb_A Thioredoxin reductase; 93.7 0.18 6.2E-06 37.8 6.8 55 45-105 184-245 (320)
99 3vrd_B FCCB subunit, flavocyto 93.7 0.068 2.3E-06 41.9 4.4 41 64-105 216-256 (401)
100 2q0l_A TRXR, thioredoxin reduc 93.7 0.13 4.4E-06 38.6 5.8 54 45-105 59-112 (311)
101 3cgv_A Geranylgeranyl reductas 93.7 0.046 1.6E-06 42.4 3.4 56 45-106 102-161 (397)
102 3ntd_A FAD-dependent pyridine 93.7 0.13 4.4E-06 42.3 6.3 42 64-105 206-265 (565)
103 1y0p_A Fumarate reductase flav 93.6 0.11 3.7E-06 43.1 5.7 55 45-105 255-315 (571)
104 2weu_A Tryptophan 5-halogenase 93.6 0.14 4.7E-06 41.6 6.2 56 45-107 173-230 (511)
105 3ihg_A RDME; flavoenzyme, anth 93.6 0.058 2E-06 44.2 3.9 56 45-106 120-182 (535)
106 2eq6_A Pyruvate dehydrogenase 93.5 0.094 3.2E-06 42.3 5.1 40 64-104 224-268 (464)
107 3nix_A Flavoprotein/dehydrogen 93.5 0.066 2.3E-06 42.0 4.0 56 45-106 106-165 (421)
108 1qo8_A Flavocytochrome C3 fuma 93.4 0.089 3.1E-06 43.6 4.9 56 44-105 249-310 (566)
109 3fmw_A Oxygenase; mithramycin, 93.2 0.05 1.7E-06 45.5 3.1 56 45-106 148-206 (570)
110 1zmd_A Dihydrolipoyl dehydroge 93.2 0.13 4.4E-06 41.5 5.4 40 64-104 234-279 (474)
111 1q1r_A Putidaredoxin reductase 93.1 0.16 5.5E-06 40.6 5.9 54 46-104 192-247 (431)
112 4b1b_A TRXR, thioredoxin reduc 93.1 0.14 4.8E-06 42.6 5.6 54 44-103 262-315 (542)
113 2a8x_A Dihydrolipoyl dehydroge 93.0 0.13 4.6E-06 41.2 5.2 40 64-104 226-268 (464)
114 1d4d_A Flavocytochrome C fumar 93.0 0.15 5E-06 42.5 5.5 54 45-104 255-314 (572)
115 1zk7_A HGII, reductase, mercur 92.9 0.17 5.8E-06 40.7 5.6 53 46-105 217-269 (467)
116 3uox_A Otemo; baeyer-villiger 92.8 0.15 5.3E-06 42.2 5.5 40 66-105 105-145 (545)
117 3klj_A NAD(FAD)-dependent dehy 92.8 0.19 6.4E-06 39.7 5.7 38 65-105 77-114 (385)
118 3atr_A Conserved archaeal prot 92.8 0.13 4.4E-06 41.2 4.8 57 45-107 100-162 (453)
119 4at0_A 3-ketosteroid-delta4-5a 92.7 0.13 4.4E-06 42.0 4.8 59 42-105 199-262 (510)
120 2qcu_A Aerobic glycerol-3-phos 92.6 0.15 5.1E-06 41.6 5.0 58 44-107 148-210 (501)
121 1vdc_A NTR, NADPH dependent th 92.5 0.13 4.4E-06 39.0 4.3 54 45-106 70-123 (333)
122 3e1t_A Halogenase; flavoprotei 92.4 0.15 5.3E-06 41.6 4.9 56 45-106 111-171 (512)
123 3dgh_A TRXR-1, thioredoxin red 92.4 0.16 5.3E-06 41.1 4.9 42 64-105 241-287 (483)
124 1ebd_A E3BD, dihydrolipoamide 92.4 0.1 3.5E-06 41.9 3.8 41 64-105 225-268 (455)
125 2cul_A Glucose-inhibited divis 92.4 0.18 6.1E-06 36.7 4.8 54 46-105 69-123 (232)
126 3s5w_A L-ornithine 5-monooxyge 92.3 0.17 5.9E-06 40.3 4.9 41 64-105 330-375 (463)
127 1dxl_A Dihydrolipoamide dehydr 92.1 0.15 5.2E-06 40.9 4.5 41 64-105 232-277 (470)
128 3i3l_A Alkylhalidase CMLS; fla 92.1 0.24 8.4E-06 41.5 5.8 58 45-107 128-188 (591)
129 2gmh_A Electron transfer flavo 92.0 0.32 1.1E-05 40.6 6.5 57 45-106 144-216 (584)
130 3h8l_A NADH oxidase; membrane 92.0 0.15 5E-06 40.2 4.1 51 45-105 218-268 (409)
131 2gqw_A Ferredoxin reductase; f 91.9 0.29 9.9E-06 38.7 5.8 36 64-104 201-236 (408)
132 1hyu_A AHPF, alkyl hydroperoxi 91.8 0.35 1.2E-05 39.7 6.3 56 45-105 267-324 (521)
133 3ic9_A Dihydrolipoamide dehydr 91.7 0.41 1.4E-05 38.9 6.6 39 66-105 230-272 (492)
134 3ics_A Coenzyme A-disulfide re 91.6 0.25 8.6E-06 40.9 5.4 52 46-105 229-280 (588)
135 3urh_A Dihydrolipoyl dehydroge 91.6 0.18 6.2E-06 40.8 4.4 41 64-105 253-298 (491)
136 2e4g_A Tryptophan halogenase; 91.6 0.36 1.2E-05 39.8 6.2 41 65-107 210-252 (550)
137 3itj_A Thioredoxin reductase 1 91.5 0.28 9.5E-06 36.9 5.1 54 45-105 84-140 (338)
138 3s5w_A L-ornithine 5-monooxyge 91.5 0.26 8.8E-06 39.3 5.1 40 66-105 143-190 (463)
139 2aqj_A Tryptophan halogenase, 91.4 0.3 1E-05 40.0 5.6 56 45-107 165-222 (538)
140 3l8k_A Dihydrolipoyl dehydroge 90.9 0.44 1.5E-05 38.3 6.0 53 44-105 213-270 (466)
141 1nhp_A NADH peroxidase; oxidor 90.9 0.44 1.5E-05 38.0 5.9 52 46-105 192-244 (447)
142 2bc0_A NADH oxidase; flavoprot 90.8 0.49 1.7E-05 38.3 6.2 51 46-104 237-288 (490)
143 1y56_A Hypothetical protein PH 90.7 0.4 1.4E-05 39.0 5.6 56 40-105 256-311 (493)
144 3itj_A Thioredoxin reductase 1 90.6 0.3 1E-05 36.7 4.5 41 64-105 223-269 (338)
145 3da1_A Glycerol-3-phosphate de 90.5 0.18 6.1E-06 41.9 3.4 57 45-107 170-232 (561)
146 3dk9_A Grase, GR, glutathione 90.4 0.39 1.3E-05 38.6 5.3 41 64-105 242-291 (478)
147 4fk1_A Putative thioredoxin re 90.3 0.81 2.8E-05 34.3 6.7 40 66-105 76-115 (304)
148 4b63_A L-ornithine N5 monooxyg 90.2 0.43 1.5E-05 39.0 5.4 52 45-104 148-211 (501)
149 3d1c_A Flavin-containing putat 90.2 0.42 1.4E-05 36.5 5.1 39 65-104 230-269 (369)
150 2xve_A Flavin-containing monoo 90.1 0.2 6.8E-06 40.5 3.3 39 66-105 119-164 (464)
151 1trb_A Thioredoxin reductase; 90.0 0.45 1.5E-05 35.6 5.1 53 45-105 62-114 (320)
152 3c96_A Flavin-containing monoo 89.9 0.44 1.5E-05 37.4 5.1 39 66-106 125-168 (410)
153 2zbw_A Thioredoxin reductase; 89.7 0.75 2.6E-05 34.6 6.1 55 45-105 191-250 (335)
154 2r0c_A REBC; flavin adenine di 89.6 0.36 1.2E-05 39.8 4.6 53 45-106 138-195 (549)
155 2zxi_A TRNA uridine 5-carboxym 89.5 0.67 2.3E-05 39.5 6.2 56 45-106 123-179 (637)
156 1v59_A Dihydrolipoamide dehydr 89.5 0.36 1.2E-05 38.8 4.4 41 64-104 238-284 (478)
157 2pyx_A Tryptophan halogenase; 89.3 0.59 2E-05 38.2 5.6 54 46-106 176-232 (526)
158 3f8d_A Thioredoxin reductase ( 89.2 0.57 1.9E-05 34.8 5.1 40 64-104 204-248 (323)
159 2q7v_A Thioredoxin reductase; 88.9 0.52 1.8E-05 35.5 4.7 54 45-105 65-121 (325)
160 3cty_A Thioredoxin reductase; 88.8 0.83 2.8E-05 34.2 5.7 53 45-105 72-124 (319)
161 2bry_A NEDD9 interacting prote 88.7 0.24 8.2E-06 40.5 2.8 58 45-107 166-230 (497)
162 3ces_A MNMG, tRNA uridine 5-ca 88.4 0.69 2.4E-05 39.5 5.5 54 46-106 125-180 (651)
163 3dgz_A Thioredoxin reductase 2 88.4 0.58 2E-05 37.8 4.9 55 46-105 226-285 (488)
164 2a87_A TRXR, TR, thioredoxin r 88.3 0.6 2.1E-05 35.4 4.7 53 45-105 71-124 (335)
165 3cgb_A Pyridine nucleotide-dis 88.0 0.84 2.9E-05 36.8 5.6 52 46-105 228-280 (480)
166 3lzw_A Ferredoxin--NADP reduct 87.7 0.49 1.7E-05 35.4 3.8 41 64-105 203-248 (332)
167 3r9u_A Thioredoxin reductase; 87.6 0.7 2.4E-05 34.2 4.6 41 64-105 197-242 (315)
168 3ab1_A Ferredoxin--NADP reduct 87.5 0.88 3E-05 34.8 5.2 39 65-104 217-260 (360)
169 1q1r_A Putidaredoxin reductase 87.3 1 3.6E-05 35.8 5.7 38 65-105 75-112 (431)
170 1rp0_A ARA6, thiazole biosynth 87.2 0.83 2.8E-05 34.2 4.8 54 45-104 119-188 (284)
171 2h88_A Succinate dehydrogenase 86.9 1.2 4E-05 37.7 6.0 55 45-105 155-215 (621)
172 2q0l_A TRXR, thioredoxin reduc 86.8 1 3.5E-05 33.4 5.2 41 64-105 193-239 (311)
173 3h28_A Sulfide-quinone reducta 86.7 0.43 1.5E-05 37.8 3.1 44 64-110 214-262 (430)
174 2rgh_A Alpha-glycerophosphate 86.6 0.53 1.8E-05 39.1 3.7 57 45-107 188-250 (571)
175 3cgb_A Pyridine nucleotide-dis 86.5 1.1 3.7E-05 36.2 5.4 40 65-105 108-150 (480)
176 1kf6_A Fumarate reductase flav 86.3 1.3 4.4E-05 37.1 6.0 55 45-105 134-195 (602)
177 2gqw_A Ferredoxin reductase; f 86.1 0.92 3.2E-05 35.8 4.7 39 64-105 73-111 (408)
178 1lvl_A Dihydrolipoamide dehydr 85.9 0.57 2E-05 37.6 3.5 39 64-105 226-266 (458)
179 2q7v_A Thioredoxin reductase; 84.9 1.7 5.7E-05 32.6 5.5 40 64-104 202-246 (325)
180 3ef6_A Toluene 1,2-dioxygenase 84.9 1.1 3.8E-05 35.3 4.7 38 65-105 72-109 (410)
181 2bc0_A NADH oxidase; flavoprot 84.8 0.94 3.2E-05 36.6 4.3 40 65-105 107-147 (490)
182 3cp8_A TRNA uridine 5-carboxym 84.8 1.2 4.2E-05 37.9 5.1 40 65-106 133-173 (641)
183 2wdq_A Succinate dehydrogenase 84.7 1.3 4.3E-05 37.1 5.1 56 45-105 143-204 (588)
184 4g6h_A Rotenone-insensitive NA 84.6 0.8 2.7E-05 37.5 3.8 51 45-103 272-328 (502)
185 1xhc_A NADH oxidase /nitrite r 84.6 1 3.5E-05 35.1 4.3 37 65-105 75-111 (367)
186 1fl2_A Alkyl hydroperoxide red 83.8 1.7 5.9E-05 32.2 5.1 40 64-104 194-239 (310)
187 1m6i_A Programmed cell death p 83.8 0.88 3E-05 37.0 3.7 38 64-104 104-141 (493)
188 3fbs_A Oxidoreductase; structu 83.7 1.4 4.8E-05 32.2 4.5 36 65-105 189-224 (297)
189 3kd9_A Coenzyme A disulfide re 83.5 2.1 7.2E-05 34.0 5.8 38 66-105 205-242 (449)
190 2dkh_A 3-hydroxybenzoate hydro 83.0 1 3.5E-05 37.8 3.9 56 45-106 141-210 (639)
191 3cty_A Thioredoxin reductase; 82.9 1.9 6.6E-05 32.2 5.1 40 64-104 204-249 (319)
192 2bs2_A Quinol-fumarate reducta 82.5 1.4 4.8E-05 37.4 4.6 55 45-105 158-218 (660)
193 3oc4_A Oxidoreductase, pyridin 82.2 1.4 4.7E-05 35.2 4.2 40 65-105 73-113 (452)
194 3ntd_A FAD-dependent pyridine 82.1 1.7 5.7E-05 35.5 4.8 39 66-105 74-115 (565)
195 1nhp_A NADH peroxidase; oxidor 81.9 2.2 7.6E-05 33.8 5.3 40 65-105 71-113 (447)
196 1vdc_A NTR, NADPH dependent th 81.8 2.6 8.8E-05 31.6 5.5 41 64-105 209-257 (333)
197 3hyw_A Sulfide-quinone reducta 81.8 1.8 6E-05 34.4 4.7 38 65-106 71-108 (430)
198 3ics_A Coenzyme A-disulfide re 81.7 3.7 0.00013 33.8 6.8 39 66-105 109-150 (588)
199 3hyw_A Sulfide-quinone reducta 80.9 4.2 0.00014 32.2 6.6 37 65-104 215-253 (430)
200 3iwa_A FAD-dependent pyridine 80.4 2.7 9.1E-05 33.6 5.3 40 65-105 81-123 (472)
201 1xhc_A NADH oxidase /nitrite r 80.4 1.7 5.8E-05 33.8 4.1 48 46-104 184-231 (367)
202 3lxd_A FAD-dependent pyridine 80.3 1.7 5.9E-05 34.1 4.1 37 65-104 80-116 (415)
203 3kd9_A Coenzyme A disulfide re 79.6 2.4 8.4E-05 33.6 4.9 38 65-105 74-112 (449)
204 4eqs_A Coenzyme A disulfide re 79.4 1.4 4.7E-05 35.2 3.3 36 64-104 202-237 (437)
205 3sx6_A Sulfide-quinone reducta 79.2 1.5 5E-05 34.8 3.4 38 64-104 222-266 (437)
206 3k30_A Histamine dehydrogenase 78.8 1.5 5E-05 37.3 3.4 39 64-105 581-622 (690)
207 3r9u_A Thioredoxin reductase; 78.0 4.9 0.00017 29.5 5.9 52 45-105 62-116 (315)
208 2e5v_A L-aspartate oxidase; ar 77.7 0.89 3E-05 36.8 1.7 54 45-106 119-175 (472)
209 4a5l_A Thioredoxin reductase; 76.9 4.3 0.00015 29.9 5.3 54 45-105 66-119 (314)
210 3sx6_A Sulfide-quinone reducta 75.8 5 0.00017 31.7 5.7 37 65-105 74-110 (437)
211 2cdu_A NADPH oxidase; flavoenz 75.7 2.8 9.5E-05 33.3 4.1 40 65-105 73-115 (452)
212 3fg2_P Putative rubredoxin red 74.0 6 0.0002 30.8 5.6 37 65-105 72-108 (404)
213 2a87_A TRXR, TR, thioredoxin r 73.7 3 0.0001 31.5 3.7 41 64-105 205-250 (335)
214 3h28_A Sulfide-quinone reducta 71.6 7.3 0.00025 30.6 5.6 38 64-105 70-107 (430)
215 1ps9_A 2,4-dienoyl-COA reducta 71.3 4.5 0.00016 34.0 4.6 38 64-105 587-626 (671)
216 1ebd_A E3BD, dihydrolipoamide 70.3 5.1 0.00018 31.8 4.5 37 65-105 106-143 (455)
217 3h8l_A NADH oxidase; membrane 68.7 7.9 0.00027 30.1 5.2 39 65-105 71-111 (409)
218 1y56_A Hypothetical protein PH 68.6 7.8 0.00027 31.3 5.3 55 44-105 160-217 (493)
219 3qfa_A Thioredoxin reductase 1 67.8 6.2 0.00021 32.1 4.5 55 46-105 251-313 (519)
220 1chu_A Protein (L-aspartate ox 67.7 6.9 0.00024 32.1 4.9 42 64-105 153-206 (540)
221 2x8g_A Thioredoxin glutathione 67.1 9.8 0.00034 31.4 5.7 54 46-104 327-392 (598)
222 1coy_A Cholesterol oxidase; ox 67.1 6.9 0.00024 31.8 4.7 41 65-106 242-292 (507)
223 1n4w_A CHOD, cholesterol oxida 66.6 7.3 0.00025 31.6 4.7 41 65-105 237-286 (504)
224 1hyu_A AHPF, alkyl hydroperoxi 65.6 9.3 0.00032 31.1 5.2 40 64-104 405-450 (521)
225 2a8x_A Dihydrolipoyl dehydroge 65.4 5.1 0.00018 31.9 3.5 37 65-105 106-144 (464)
226 3gwf_A Cyclohexanone monooxyge 64.9 7.2 0.00025 32.1 4.4 33 70-107 352-384 (540)
227 4eqs_A Coenzyme A disulfide re 63.1 11 0.00038 29.8 5.1 40 66-106 73-115 (437)
228 3vrd_B FCCB subunit, flavocyto 62.8 9.8 0.00033 29.3 4.7 37 66-106 71-107 (401)
229 3l8k_A Dihydrolipoyl dehydroge 59.5 22 0.00074 28.2 6.3 37 65-105 104-142 (466)
230 3uox_A Otemo; baeyer-villiger 58.9 18 0.0006 29.8 5.7 36 66-107 354-391 (545)
231 3oz2_A Digeranylgeranylglycero 58.6 7.8 0.00027 29.2 3.4 42 64-106 116-161 (397)
232 2v3a_A Rubredoxin reductase; a 57.6 10 0.00036 29.1 4.0 36 66-105 76-111 (384)
233 1jnr_A Adenylylsulfate reducta 57.3 16 0.00055 30.7 5.3 40 65-105 167-216 (643)
234 1v59_A Dihydrolipoamide dehydr 56.2 8.6 0.0003 30.6 3.4 38 65-106 111-156 (478)
235 3pl8_A Pyranose 2-oxidase; sub 55.1 11 0.00038 31.6 4.0 41 65-105 275-322 (623)
236 1dxl_A Dihydrolipoamide dehydr 55.1 11 0.00039 29.8 3.9 37 65-105 111-149 (470)
237 4b63_A L-ornithine N5 monooxyg 54.4 6.2 0.00021 32.0 2.2 39 66-104 355-406 (501)
238 1pn0_A Phenol 2-monooxygenase; 54.3 10 0.00034 32.1 3.6 23 66-88 138-167 (665)
239 1zk7_A HGII, reductase, mercur 54.1 14 0.00049 29.2 4.3 37 65-105 110-148 (467)
240 2jbv_A Choline oxidase; alcoho 52.5 21 0.00071 29.3 5.2 41 64-105 223-271 (546)
241 4a9w_A Monooxygenase; baeyer-v 52.2 7.6 0.00026 28.9 2.3 34 67-105 250-283 (357)
242 2gag_A Heterotetrameric sarcos 51.7 15 0.00051 32.5 4.4 40 64-104 330-380 (965)
243 1kdg_A CDH, cellobiose dehydro 51.1 23 0.0008 28.7 5.2 40 65-105 211-259 (546)
244 1ju2_A HydroxynitrIle lyase; f 49.4 26 0.00089 28.6 5.3 41 64-105 208-259 (536)
245 1ojt_A Surface protein; redox- 46.9 8.8 0.0003 30.7 2.0 38 65-106 110-159 (482)
246 4ap3_A Steroid monooxygenase; 46.4 26 0.00088 28.8 4.8 32 70-107 365-396 (549)
247 1xdi_A RV3303C-LPDA; reductase 46.3 17 0.00058 29.2 3.6 38 65-104 110-153 (499)
248 2qae_A Lipoamide, dihydrolipoy 44.0 19 0.00065 28.5 3.6 36 66-105 109-146 (468)
249 2gv8_A Monooxygenase; FMO, FAD 43.8 19 0.00065 28.3 3.5 35 67-104 254-289 (447)
250 4g6h_A Rotenone-insensitive NA 43.1 25 0.00086 28.5 4.2 34 71-105 116-167 (502)
251 1o94_A Tmadh, trimethylamine d 42.7 14 0.00049 31.4 2.8 39 64-105 585-644 (729)
252 3jsk_A Cypbp37 protein; octame 42.6 32 0.0011 26.8 4.5 30 45-78 160-189 (344)
253 2hqm_A GR, grase, glutathione 42.5 16 0.00054 29.2 2.9 37 65-105 120-158 (479)
254 2xve_A Flavin-containing monoo 41.9 30 0.001 27.5 4.5 30 71-105 245-274 (464)
255 4fk1_A Putative thioredoxin re 40.0 36 0.0012 25.0 4.4 36 66-103 196-232 (304)
256 1lqt_A FPRA; NADP+ derivative, 39.7 32 0.0011 27.4 4.3 41 64-105 266-324 (456)
257 4gcm_A TRXR, thioredoxin reduc 38.2 41 0.0014 24.6 4.4 37 66-105 78-114 (312)
258 1cjc_A Protein (adrenodoxin re 36.6 37 0.0013 27.1 4.2 40 64-104 271-330 (460)
259 1zmd_A Dihydrolipoyl dehydroge 36.5 28 0.00096 27.6 3.4 37 65-105 112-150 (474)
260 1w4x_A Phenylacetone monooxyge 36.1 49 0.0017 26.8 4.9 32 70-107 360-391 (542)
261 2yqu_A 2-oxoglutarate dehydrog 35.8 25 0.00084 27.7 3.0 35 66-105 105-139 (455)
262 3gyx_A Adenylylsulfate reducta 35.4 34 0.0012 29.0 3.9 39 65-104 183-230 (662)
263 3fim_B ARYL-alcohol oxidase; A 33.4 56 0.0019 27.0 4.9 38 65-103 223-272 (566)
264 3t37_A Probable dehydrogenase; 33.4 49 0.0017 26.4 4.4 37 66-103 227-267 (526)
265 1gpe_A Protein (glucose oxidas 32.1 45 0.0015 27.6 4.1 41 65-105 246-295 (587)
266 2l8d_A Lamin-B receptor; DNA b 31.9 48 0.0016 19.5 3.0 29 64-93 22-50 (66)
267 3ft1_A PHL P 3 allergen; beta- 31.6 35 0.0012 21.7 2.7 17 84-100 67-83 (100)
268 2hx5_A Hypothetical protein; t 30.4 87 0.003 20.2 4.7 21 117-137 131-151 (152)
269 3q9t_A Choline dehydrogenase a 30.2 59 0.002 27.0 4.5 39 65-103 221-266 (577)
270 1gte_A Dihydropyrimidine dehyd 29.3 64 0.0022 28.7 4.8 40 64-104 384-439 (1025)
271 3qvp_A Glucose oxidase; oxidor 29.0 64 0.0022 26.8 4.5 39 65-103 242-289 (583)
272 2dig_A Lamin-B receptor; tudor 27.4 56 0.0019 19.3 2.8 28 65-93 26-53 (68)
273 2jnz_A PHL P 3 allergen; timot 27.4 42 0.0014 21.7 2.5 17 84-100 78-94 (108)
274 1iwm_A Outer membrane lipoprot 26.6 64 0.0022 22.6 3.6 42 69-111 68-117 (186)
275 3lad_A Dihydrolipoamide dehydr 25.7 52 0.0018 25.9 3.3 36 66-105 115-152 (476)
276 2g3r_A Tumor suppressor P53-bi 23.8 54 0.0018 21.8 2.5 37 69-107 22-60 (123)
277 3urh_A Dihydrolipoyl dehydroge 23.8 60 0.002 25.8 3.3 25 80-104 141-167 (491)
278 1fec_A Trypanothione reductase 23.5 74 0.0025 25.4 3.8 37 65-105 119-161 (490)
279 3f7w_A Putative fructosamine-3 23.1 75 0.0026 23.0 3.6 37 43-93 1-41 (288)
280 3dgz_A Thioredoxin reductase 2 23.0 51 0.0017 26.2 2.8 26 80-105 130-157 (488)
281 2gjc_A Thiazole biosynthetic e 22.7 1.3E+02 0.0044 23.1 4.9 57 45-105 146-237 (326)
282 3qfa_A Thioredoxin reductase 1 22.0 51 0.0017 26.6 2.6 25 81-105 157-183 (519)
283 1c0p_A D-amino acid oxidase; a 21.1 18 0.00063 27.3 -0.2 44 45-107 142-185 (363)
284 2vdc_G Glutamate synthase [NAD 20.3 35 0.0012 27.2 1.3 40 64-105 316-376 (456)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.77 E-value=5.9e-19 Score=150.61 Aligned_cols=121 Identities=24% Similarity=0.377 Sum_probs=101.7
Q ss_pred cCCCChhccccccccccc--cCCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeC
Q psy13542 12 DGSENWFETSARGLDSFT--DLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCA 89 (147)
Q Consensus 12 ~~g~~~~~~S~~~~~~~~--~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~ 89 (147)
.++.+++.+|+..+.... ...|.+.. ++||+++|+++|++.+ +|++|++|++|.+ ++++|+|++.
T Consensus 368 ~~~~~l~~ls~~~~~~~~~~~~~g~~~~--~~gG~~~l~~~La~~l----------~I~l~~~V~~I~~-~~~~v~V~~~ 434 (662)
T 2z3y_A 368 ANATPLSTLSLKHWDQDDDFEFTGSHLT--VRNGYSCVPVALAEGL----------DIKLNTAVRQVRY-TASGCEVIAV 434 (662)
T ss_dssp HTTSCGGGBBTTTTTTTGGGCCBSCCEE--ETTCTTHHHHHHTTTC----------EEETTEEEEEEEE-ETTEEEEEEE
T ss_pred hcCCChhhcCHhhcCCCcccccCCceee--ecCcHHHHHHHHHhcC----------ceecCCeEEEEEE-CCCcEEEEEe
Confidence 447788899988765432 23344443 7999999999998755 6999999999999 7788999876
Q ss_pred C------CcEEEcCEEEEecChhHHhhCC--cccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 90 D------GTQYSADRILITVSLGVLKSNL--ITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 90 ~------g~~~~ad~VI~t~P~~~l~~~~--~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+ |++++||+||+|+|+++|+++. +.|.|+||+.+.++|++++||.+.||++ .|+++
T Consensus 435 ~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l-~f~~~ 498 (662)
T 2z3y_A 435 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVL-CFDRV 498 (662)
T ss_dssp ESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEE-ECSSC
T ss_pred ecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEE-EcCcc
Confidence 5 5689999999999999999842 4799999999999999999999999999 99876
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.74 E-value=3.6e-18 Score=149.44 Aligned_cols=120 Identities=25% Similarity=0.387 Sum_probs=100.4
Q ss_pred CCCChhcccccccccccc--CCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCC
Q psy13542 13 GSENWFETSARGLDSFTD--LEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD 90 (147)
Q Consensus 13 ~g~~~~~~S~~~~~~~~~--~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~ 90 (147)
.+.+++.+|+..+..... ..|.+.. ++||+++|+++|++.+ +|++|++|++|.+ .+++|+|++.+
T Consensus 540 ~~~~l~~lSl~~~~~~~~~~~~g~~~~--~~gG~~~L~~aLa~~l----------~I~Lnt~V~~I~~-~~~gV~V~~~~ 606 (852)
T 2xag_A 540 NATPLSTLSLKHWDQDDDFEFTGSHLT--VRNGYSCVPVALAEGL----------DIKLNTAVRQVRY-TASGCEVIAVN 606 (852)
T ss_dssp HTSCTTTBBTTTTTGGGGGCCBSCCEE--ETTCTTHHHHHHTTTC----------CEECSEEEEEEEE-ETTEEEEEEEE
T ss_pred ccCChHhhhhhhhhhccccccCCceEE--ecCcHHHHHHHHHhCC----------CEEeCCeEEEEEE-cCCcEEEEEee
Confidence 366788888877654322 3344433 7999999999998865 5999999999999 77889998765
Q ss_pred ------CcEEEcCEEEEecChhHHhhCC--cccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 91 ------GTQYSADRILITVSLGVLKSNL--ITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 91 ------g~~~~ad~VI~t~P~~~l~~~~--~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
|++++||+||+|+|+++|+++. +.|.|+||+.+.++|++++||.+.||++ .|+++
T Consensus 607 ~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L-~F~~~ 669 (852)
T 2xag_A 607 TRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVL-CFDRV 669 (852)
T ss_dssp SSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEE-ECSSC
T ss_pred cccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEE-EcCCc
Confidence 5689999999999999999842 4799999999999999999999999999 99875
No 3
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.72 E-value=3.7e-17 Score=135.24 Aligned_cols=120 Identities=29% Similarity=0.405 Sum_probs=99.9
Q ss_pred CCChhccccccccccccCCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcE
Q psy13542 14 SENWFETSARGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQ 93 (147)
Q Consensus 14 g~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~ 93 (147)
|.+++++|+..+... ..+...+ ++| +++++++|++.+.. ++|++|++|++|.+++++++.|++.+|++
T Consensus 176 g~~~~~~s~~~~~~~--~~~~~~~--~~g-~~~l~~~l~~~l~~-------~~i~~~~~V~~I~~~~~~~v~v~~~~g~~ 243 (516)
T 1rsg_A 176 GLDWKLLSAKDTYFG--HQGRNAF--ALN-YDSVVQRIAQSFPQ-------NWLKLSCEVKSITREPSKNVTVNCEDGTV 243 (516)
T ss_dssp TBCTTTSBHHHHCCC--CSSCCEE--ESC-HHHHHHHHHTTSCG-------GGEETTCCEEEEEECTTSCEEEEETTSCE
T ss_pred CCChHHCChHHHHhh--ccCcchh--hhC-HHHHHHHHHHhCCC-------CEEEECCEEEEEEEcCCCeEEEEECCCcE
Confidence 666778887665422 3344444 567 99999999999974 37999999999998336679999999989
Q ss_pred EEcCEEEEecChhHHhhC---------CcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 94 YSADRILITVSLGVLKSN---------LITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 94 ~~ad~VI~t~P~~~l~~~---------~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
++||+||+|+|+++++.. .+.|.|+||+.+.++|++++||++.||++ .|+++
T Consensus 244 ~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l-~f~~~ 304 (516)
T 1rsg_A 244 YNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIF-EFEEC 304 (516)
T ss_dssp EEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEE-EESSC
T ss_pred EECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEE-EeCCC
Confidence 999999999999999853 24899999999999999999999999999 99875
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.71 E-value=3.1e-17 Score=135.63 Aligned_cols=125 Identities=19% Similarity=0.169 Sum_probs=106.0
Q ss_pred ccccCCCChhccccccccccccCC-----------CCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEE
Q psy13542 9 NTYDGSENWFETSARGLDSFTDLE-----------GCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKIN 77 (147)
Q Consensus 9 ~~~~~g~~~~~~S~~~~~~~~~~~-----------g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~ 77 (147)
....+|.+++++|+..++.+.... +.... ++.||+++++++|++.++ .+|++|++|++|.
T Consensus 169 ~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~ 239 (520)
T 1s3e_A 169 VNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQER-KFVGGSGQVSERIMDLLG--------DRVKLERPVIYID 239 (520)
T ss_dssp HHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSE-EETTCTHHHHHHHHHHHG--------GGEESSCCEEEEE
T ss_pred HhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceE-EEeCCHHHHHHHHHHHcC--------CcEEcCCeeEEEE
Confidence 344567789999988776554321 22222 279999999999999885 3799999999999
Q ss_pred ecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 78 WEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 78 ~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
. ++++++|++.+|+++.||+||+|+|+.+++++ .|.|+||+.+.+++++++|+.+.|+++ .|+++
T Consensus 240 ~-~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l-~~~~~ 304 (520)
T 1s3e_A 240 Q-TRENVLVETLNHEMYEAKYVISAIPPTLGMKI--HFNPPLPMMRNQMITRVPLGSVIKCIV-YYKEP 304 (520)
T ss_dssp C-SSSSEEEEETTSCEEEESEEEECSCGGGGGGS--EEESCCCHHHHHHTTSCCBCCEEEEEE-ECSSC
T ss_pred E-CCCeEEEEECCCeEEEeCEEEECCCHHHHcce--eeCCCCCHHHHHHHHhCCCcceEEEEE-EeCCC
Confidence 8 77889999999999999999999999999988 789999999999999999999999999 99875
No 5
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.69 E-value=6.3e-17 Score=132.67 Aligned_cols=130 Identities=15% Similarity=0.233 Sum_probs=108.5
Q ss_pred hhccccCCCChhccccccccccccCCCC---------ceeeecCCcHHHHHHHHHhhCCCCCCCCCc-ceEEcCCceEEE
Q psy13542 7 NQNTYDGSENWFETSARGLDSFTDLEGC---------FGVVWKKGGYGNVFKLLMKQMPGQTPIDLS-KKLLLKKEVTKI 76 (147)
Q Consensus 7 ~~~~~~~g~~~~~~S~~~~~~~~~~~g~---------~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g-~~i~l~~~V~~I 76 (147)
......++.+++++|+..++.+....+. ..+. ++||+++++++|++.+... | .+|+++++|++|
T Consensus 209 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gG~~~l~~~l~~~l~~~-----g~~~i~~~~~V~~i 282 (495)
T 2vvm_A 209 AFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYK-FKDGQSAFARRFWEEAAGT-----GRLGYVFGCPVRSV 282 (495)
T ss_dssp HHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEE-ETTCHHHHHHHHHHHHHTT-----TCEEEESSCCEEEE
T ss_pred HHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEE-eCCCHHHHHHHHHHHhhhc-----CceEEEeCCEEEEE
Confidence 3444566788999999887765432111 1122 6999999999999998754 3 479999999999
Q ss_pred EecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 77 NWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 77 ~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
.. .++++.|++.+|++++||+||+|+|+++++++ .|.|+||+.+.++++.++|+.+.|+++ .|+++
T Consensus 283 ~~-~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l-~~~~~ 348 (495)
T 2vvm_A 283 VN-ERDAARVTARDGREFVAKRVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHA-EVDNK 348 (495)
T ss_dssp EE-CSSSEEEEETTCCEEEEEEEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEE-EESCG
T ss_pred EE-cCCEEEEEECCCCEEEcCEEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEE-EECCc
Confidence 98 77789999999988999999999999999988 789999999999999999999999999 99874
No 6
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.68 E-value=3.4e-16 Score=135.93 Aligned_cols=121 Identities=34% Similarity=0.516 Sum_probs=104.0
Q ss_pred cCCCChhccccccccc---cccCCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe
Q psy13542 12 DGSENWFETSARGLDS---FTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC 88 (147)
Q Consensus 12 ~~g~~~~~~S~~~~~~---~~~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~ 88 (147)
..|..++++|+..+.. +....|...+ +.+|++.++++|++.+ +|+++++|++|.+ ++++|+|++
T Consensus 500 ~~G~~l~~ls~~~~~~~~~~~~~~G~~~~--~~~G~~~l~~aLa~gl----------~I~l~t~V~~I~~-~~~~v~V~~ 566 (776)
T 4gut_A 500 ACGSNLHQVSARSWDHNEFFAQFAGDHTL--LTPGYSVIIEKLAEGL----------DIQLKSPVQCIDY-SGDEVQVTT 566 (776)
T ss_dssp HHTSCTTSBBTTTTTGGGGSCCCCSCEEE--CTTCTHHHHHHHHTTS----------CEESSCCEEEEEC-SSSSEEEEE
T ss_pred hcCCChHHcChhhhhhhhhHHhcCCCeEE--ECChHHHHHHHHHhCC----------cEEcCCeeEEEEE-cCCEEEEEE
Confidence 4567788888776543 2234455555 7999999999998755 5999999999999 778899999
Q ss_pred CCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 89 ADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 89 ~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
.+|+++.||+||+|+|+++++...+.|.|+||+.+.++|++++||.+.|+++ .|+++
T Consensus 567 ~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l-~f~~~ 623 (776)
T 4gut_A 567 TDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIAL-QFPYR 623 (776)
T ss_dssp TTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEE-ECSSC
T ss_pred CCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEE-ecCcc
Confidence 9998999999999999999987666899999999999999999999999999 99876
No 7
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.67 E-value=3.5e-16 Score=127.93 Aligned_cols=131 Identities=31% Similarity=0.414 Sum_probs=101.5
Q ss_pred CCChhccccccccccc---cCCCCceeeecCCcHHHHHHHHHhhCCCCC-CCC--CcceEEcCCceEEEEecCCCcEEEE
Q psy13542 14 SENWFETSARGLDSFT---DLEGCFGVVWKKGGYGNVFKLLMKQMPGQT-PID--LSKKLLLKKEVTKINWEDPKGVVVT 87 (147)
Q Consensus 14 g~~~~~~S~~~~~~~~---~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~-~~~--~g~~i~l~~~V~~I~~~~~~~v~v~ 87 (147)
+.+++..|+..+.... ...+...+.+++||+++++++|++.+.... .-+ .|.+|+++++|++|.. .+++++|+
T Consensus 172 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~-~~~~v~v~ 250 (472)
T 1b37_A 172 AEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY-SPGGVTVK 250 (472)
T ss_dssp SSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE-CSSCEEEE
T ss_pred cccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE-cCCcEEEE
Confidence 4556666654432111 112223343358999999999999985310 000 0248999999999999 77889999
Q ss_pred eCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 88 CADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 88 ~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+.+|++++||+||+|+|+.+++.+++.|.|+||+.+.++|++++|+.+.|+++ .|+++
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l-~~~~~ 308 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFL-KFPRK 308 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEE-ECSSC
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEE-ECCCc
Confidence 99999999999999999999998766899999999999999999999999999 99875
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.66 E-value=1.6e-16 Score=128.62 Aligned_cols=123 Identities=16% Similarity=0.218 Sum_probs=102.2
Q ss_pred cccCCCChh-ccccccccccccCCCC----------ceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEe
Q psy13542 10 TYDGSENWF-ETSARGLDSFTDLEGC----------FGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINW 78 (147)
Q Consensus 10 ~~~~g~~~~-~~S~~~~~~~~~~~g~----------~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~ 78 (147)
...++.+++ ++|+..++.+....|. ..+ +++||+++++++|++.++ ++|++|++|++|..
T Consensus 170 ~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~~ 240 (453)
T 2yg5_A 170 AGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDK-RVIGGMQQVSIRMAEALG--------DDVFLNAPVRTVKW 240 (453)
T ss_dssp CCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCE-EETTCTHHHHHHHHHHHG--------GGEECSCCEEEEEE
T ss_pred HhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceE-EEcCChHHHHHHHHHhcC--------CcEEcCCceEEEEE
Confidence 345677788 9998877655433221 122 279999999999999885 38999999999998
Q ss_pred cCCCc-EEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 79 EDPKG-VVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 79 ~~~~~-v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
++++ +.|++ +|+++.||+||+|+|+.+++++ .|.|+||+.+.+++++++|+.+.|+++ .|+++
T Consensus 241 -~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l-~~~~~ 304 (453)
T 2yg5_A 241 -NESGATVLAD-GDIRVEASRVILAVPPNLYSRI--SYDPPLPRRQHQMHQHQSLGLVIKVHA-VYETP 304 (453)
T ss_dssp -ETTEEEEEET-TTEEEEEEEEEECSCGGGGGGS--EEESCCCHHHHHHGGGEEECCEEEEEE-EESSC
T ss_pred -eCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcC--EeCCCCCHHHHHHHhcCCCcceEEEEE-EECCC
Confidence 6677 88887 6778999999999999999987 789999999999999999999999999 88865
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.65 E-value=5.3e-16 Score=127.23 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=87.5
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCc----EEEcCEEEEecChhHHhhCCccc
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGT----QYSADRILITVSLGVLKSNLITF 115 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~----~~~ad~VI~t~P~~~l~~~~~~f 115 (147)
++||+++|+++|++.+.. +|++|++|++|.+ .+++|.|++.+|+ +++||+||+|+|+.++..+ .|
T Consensus 236 ~~gG~~~l~~~l~~~l~~--------~i~~~~~V~~I~~-~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i--~f 304 (498)
T 2iid_A 236 IVDGMDKLPTAMYRDIQD--------KVHFNAQVIKIQQ-NDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLI--KF 304 (498)
T ss_dssp ETTCTTHHHHHHHHHTGG--------GEESSCEEEEEEE-CSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTS--EE
T ss_pred eCCcHHHHHHHHHHhccc--------ccccCCEEEEEEE-CCCeEEEEEecCCcccceEEeCEEEECCChHHHhhe--ec
Confidence 799999999999999974 7999999999999 7788999887764 5899999999999999987 89
Q ss_pred CCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 116 VPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 116 ~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
.|+||+.+.+++++++|+.+.||++ .|+++
T Consensus 305 ~p~Lp~~~~~ai~~l~~~~~~kv~l-~~~~~ 334 (498)
T 2iid_A 305 NPPLLPKKAHALRSVHYRSGTKIFL-TCTTK 334 (498)
T ss_dssp ESCCCHHHHHHHHHCCEECEEEEEE-EESSC
T ss_pred CCCCCHHHHHHHHhCCCcceeEEEE-EeCCC
Confidence 9999999999999999999999999 99865
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.60 E-value=2.5e-15 Score=120.80 Aligned_cols=123 Identities=16% Similarity=0.183 Sum_probs=101.8
Q ss_pred ccCCCChhccccccccccccCCCCcee-------eecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc
Q psy13542 11 YDGSENWFETSARGLDSFTDLEGCFGV-------VWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG 83 (147)
Q Consensus 11 ~~~g~~~~~~S~~~~~~~~~~~g~~~~-------~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~ 83 (147)
..++.+++++|+..+..+....+.... ..+.+|+..+++.+++.++ +|++|++|++|.+ ++++
T Consensus 166 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~g---------~i~~~~~V~~i~~-~~~~ 235 (431)
T 3k7m_X 166 NMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEIP---------EIRLQTVVTGIDQ-SGDV 235 (431)
T ss_dssp HHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTCS---------CEESSCCEEEEEC-SSSS
T ss_pred HhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhCC---------ceEeCCEEEEEEE-cCCe
Confidence 345667788887776554432221110 0259999999999998775 5999999999998 7788
Q ss_pred EEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 84 VVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 84 v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
++|++.+|++++||+||+|+|+++++.+ .|.|+||+.+.++++.+.++...|+.+ .|+++
T Consensus 236 v~v~~~~g~~~~ad~vi~a~~~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~-~~~~~ 295 (431)
T 3k7m_X 236 VNVTVKDGHAFQAHSVIVATPMNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILI-HVRGA 295 (431)
T ss_dssp EEEEETTSCCEEEEEEEECSCGGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEE-EEESC
T ss_pred EEEEECCCCEEEeCEEEEecCcchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEE-EECCC
Confidence 9999999988999999999999999988 899999999999999999999999999 99875
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.56 E-value=1.1e-14 Score=119.15 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=85.2
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCC---cEEEcCEEEEecChhHHhhCCcccC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADG---TQYSADRILITVSLGVLKSNLITFV 116 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g---~~~~ad~VI~t~P~~~l~~~~~~f~ 116 (147)
++||+++|+++|++.++. ++|++|++|++|.+ .+++|+|++.+| ++++||+||+|+|+.+++.+ .|
T Consensus 234 ~~gG~~~l~~~l~~~l~~-------~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l--~~- 302 (489)
T 2jae_A 234 PVGGMDRIYYAFQDRIGT-------DNIVFGAEVTSMKN-VSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRL--QN- 302 (489)
T ss_dssp ETTCTTHHHHHHHHHHCG-------GGEETTCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTS--EE-
T ss_pred ecCCHHHHHHHHHHhcCC-------CeEEECCEEEEEEE-cCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhC--cc-
Confidence 799999999999999973 27999999999998 778899988876 68999999999999999987 45
Q ss_pred CCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 117 PPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 117 p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+||+.+.+++++++|+++.|+++ .|+++
T Consensus 303 -~l~~~~~~~l~~~~~~~~~kv~l-~~~~~ 330 (489)
T 2jae_A 303 -NLPGDVLTALKAAKPSSSGKLGI-EYSRR 330 (489)
T ss_dssp -CCCHHHHHHHHTEECCCEEEEEE-EESSC
T ss_pred -CCCHHHHHHHHhCCCccceEEEE-EeCCC
Confidence 79999999999999999999999 99864
No 12
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.53 E-value=1.1e-14 Score=125.37 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=89.6
Q ss_pred CChhccccccccccccCCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceE--EEEecCCCc-------EE
Q psy13542 15 ENWFETSARGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVT--KINWEDPKG-------VV 85 (147)
Q Consensus 15 ~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~--~I~~~~~~~-------v~ 85 (147)
.+..+.|+..++.+........+..+.||+++|+++|++.+.. |+.|+++++|+ +|.+ .+++ |+
T Consensus 317 ~~~~~~S~le~L~~~~~~~~~~~~~i~GG~~~L~~aLa~~l~~------g~~I~l~~~V~~~~I~~-~~~g~~~~~~~V~ 389 (721)
T 3ayj_A 317 KPLYNISLVEMMRLILWDYSNEYTLPVTENVEFIRNLFLKAQN------VGAGKLVVQVRQERVAN-ACHSGTASARAQL 389 (721)
T ss_dssp GGGTTBBHHHHHHHHHTTTTCEECCSSSSTHHHHHHHHHHHHH------HTTTSEEEEEECEEEEE-EEECSSSSCCEEE
T ss_pred CCccchhHHHHHHHHhcCCccceeEECCcHHHHHHHHHHhccc------CCceEeCCEEEeeeEEE-CCCCCccccceEE
Confidence 3445677766555442221112222799999999999999821 12799999999 9998 4333 88
Q ss_pred E-EeCCCc--EEEcCEEEEecChhHHhh----CCcc-------c--------------CCC-C-C-------HHHHHHHh
Q psy13542 86 V-TCADGT--QYSADRILITVSLGVLKS----NLIT-------F--------------VPP-L-P-------PKKLTAIE 128 (147)
Q Consensus 86 v-~~~~g~--~~~ad~VI~t~P~~~l~~----~~~~-------f--------------~p~-L-p-------~~~~~ai~ 128 (147)
| .+.+|+ +++||+||+|+|+++|.. ..+. | .|| | | +++.+||+
T Consensus 390 V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~ 469 (721)
T 3ayj_A 390 LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIG 469 (721)
T ss_dssp EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHH
T ss_pred EEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHH
Confidence 8 456776 799999999999999964 2124 3 344 6 9 99999999
Q ss_pred cCCCcceeEEEEEeC
Q psy13542 129 LTNLTSIQQDTLFQI 143 (147)
Q Consensus 129 ~~~~g~~~Kv~l~~~ 143 (147)
+++|+...||++ +|
T Consensus 470 ~l~~~~s~Kv~l-~~ 483 (721)
T 3ayj_A 470 QLHMARSSKVFA-TV 483 (721)
T ss_dssp TCCEECEEEEEE-EE
T ss_pred hcCcccceEEEE-EE
Confidence 999999999999 99
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.49 E-value=2.3e-13 Score=109.95 Aligned_cols=92 Identities=17% Similarity=0.213 Sum_probs=81.4
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPL 119 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~L 119 (147)
++||++.|+++|++.+.. ++|+++++|++|.. ++++++|++.+|++++||+||+|+|+.+++++ .+.|+
T Consensus 230 ~~~g~~~l~~~l~~~l~~-------~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l--~~~~~- 298 (470)
T 3i6d_A 230 LSTGLQTLVEEIEKQLKL-------TKVYKGTKVTKLSH-SGSCYSLELDNGVTLDADSVIVTAPHKAAAGM--LSELP- 298 (470)
T ss_dssp ETTCTHHHHHHHHHTCCS-------EEEECSCCEEEEEE-CSSSEEEEESSSCEEEESEEEECSCHHHHHHH--TTTST-
T ss_pred eCChHHHHHHHHHHhcCC-------CEEEeCCceEEEEE-cCCeEEEEECCCCEEECCEEEECCCHHHHHHH--cCCch-
Confidence 799999999999999974 38999999999999 77889999999989999999999999999987 33442
Q ss_pred CHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 120 PPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 120 p~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
..+++++++|+++.|+++ .|+++
T Consensus 299 ---~~~~~~~~~~~~~~~v~l-~~~~~ 321 (470)
T 3i6d_A 299 ---AISHLKNMHSTSVANVAL-GFPEG 321 (470)
T ss_dssp ---THHHHHTCEEEEEEEEEE-EESST
T ss_pred ---hhHHHhcCCCCceEEEEE-EECch
Confidence 367899999999999999 98875
No 14
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.48 E-value=7.3e-14 Score=113.71 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=82.6
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe---CCCcEEEcCEEEEecChhHHhhCCcccC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC---ADGTQYSADRILITVSLGVLKSNLITFV 116 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~---~~g~~~~ad~VI~t~P~~~l~~~~~~f~ 116 (147)
++||+++|+++|++.++ ++|+++++|++|.. +++++.|++ .+|++++||+||+|+|+..+.++ .
T Consensus 233 ~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~~-~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l 299 (478)
T 2ivd_A 233 FDGGLQVLIDALAASLG--------DAAHVGARVEGLAR-EDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL----L 299 (478)
T ss_dssp ETTCTHHHHHHHHHHHG--------GGEESSEEEEEEEC-C--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH----H
T ss_pred ECCCHHHHHHHHHHHhh--------hhEEcCCEEEEEEe-cCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHH----h
Confidence 79999999999999985 37999999999998 677788888 77888999999999999999875 4
Q ss_pred CCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 117 PPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 117 p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
|++|+++.+++++++++.+.|+++ .|+++
T Consensus 300 ~~l~~~~~~~l~~~~~~~~~~v~l-~~~~~ 328 (478)
T 2ivd_A 300 RPLDDALAALVAGIAYAPIAVVHL-GFDAG 328 (478)
T ss_dssp TTTCHHHHHHHHTCCBCCEEEEEE-EECTT
T ss_pred hccCHHHHHHHhcCCCCcEEEEEE-EEccc
Confidence 789999999999999999999999 88764
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.46 E-value=2.6e-13 Score=106.31 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=87.9
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPL 119 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~L 119 (147)
..+|+++++++|++.++. +|+++++|++|.. ++++++|++.+|+++.||+||+|+|++.+.+++..+.|+|
T Consensus 107 ~~~g~~~l~~~l~~~~g~--------~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 107 APQGISSIIKHYLKESGA--------EVYFRHRVTQINL-RDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp CTTCTTHHHHHHHHHHTC--------EEESSCCEEEEEE-CSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred cCCCHHHHHHHHHHhcCC--------EEEeCCEEEEEEE-cCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 689999999999998853 8999999999999 7888999999998899999999999999999865566789
Q ss_pred CHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 120 PPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 120 p~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
|++..+++++++|+++.|+++ .|+++
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l-~~~~~ 203 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGL-FYEAG 203 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEE-ECSSC
T ss_pred CHHHHHHHhcCCccccEEEEE-EECCC
Confidence 999999999999999999999 99853
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.44 E-value=3.3e-13 Score=109.91 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=80.1
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPL 119 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~L 119 (147)
++||+++|+++|++.+... +|+++++|++|.. .+++++|++.+| +++||+||+|+|+.+++++ .+.|++
T Consensus 231 ~~~G~~~l~~~l~~~l~~~-------~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~l--l~~~~~ 299 (475)
T 3lov_A 231 LETGLESLIERLEEVLERS-------EIRLETPLLAISR-EDGRYRLKTDHG-PEYADYVLLTIPHPQVVQL--LPDAHL 299 (475)
T ss_dssp ETTCHHHHHHHHHHHCSSC-------EEESSCCCCEEEE-ETTEEEEECTTC-CEEESEEEECSCHHHHHHH--CTTSCC
T ss_pred eCChHHHHHHHHHhhccCC-------EEEcCCeeeEEEE-eCCEEEEEECCC-eEECCEEEECCCHHHHHHH--cCccCH
Confidence 7999999999999999742 8999999999998 777899999999 8999999999999999987 445543
Q ss_pred CHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 120 PPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 120 p~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+++++++|+++.|+++ .|+++
T Consensus 300 -----~~~~~~~~~~~~~v~l-~~~~~ 320 (475)
T 3lov_A 300 -----PELEQLTTHSTATVTM-IFDQQ 320 (475)
T ss_dssp -----HHHHTCCEEEEEEEEE-EEECC
T ss_pred -----HHHhcCCCCeEEEEEE-EECCc
Confidence 7889999999999999 88865
No 17
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.38 E-value=4.7e-13 Score=92.87 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=49.7
Q ss_pred cEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 92 TQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 92 ~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
++++||+||||+|+++|+.+ .|.|+||+.+.++|++++||..+|+++ +|+++
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I--~F~P~LP~~k~~Ai~~l~~g~~~Kv~l-~f~~~ 55 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFV--KVTPPFSYKKRRAVIETHYDQATKVLL-EFSRR 55 (130)
T ss_dssp EEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEE-EESSC
T ss_pred eEEEcCEEEEcCCHHHHhcC--cCCCCCCHHHHHHHHhCCCcceeEEEE-EECCC
Confidence 47899999999999999987 999999999999999999999999999 99886
No 18
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.36 E-value=3.7e-12 Score=104.97 Aligned_cols=126 Identities=15% Similarity=0.099 Sum_probs=97.1
Q ss_pred cccCCCChhccccccccccccC--------------C----C-Cceeee-cCCcHHHHHHHHHhhCCCCCCCCCcceEEc
Q psy13542 10 TYDGSENWFETSARGLDSFTDL--------------E----G-CFGVVW-KKGGYGNVFKLLMKQMPGQTPIDLSKKLLL 69 (147)
Q Consensus 10 ~~~~g~~~~~~S~~~~~~~~~~--------------~----g-~~~~~~-~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l 69 (147)
...|+.+++++|+.++...... . + ...+.| +.||+++|+++|++.+... +|++
T Consensus 161 ~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~-------~i~~ 233 (484)
T 4dsg_A 161 FKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSE-------KLTF 233 (484)
T ss_dssp HHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGG-------GEEE
T ss_pred hhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhC-------eEEE
Confidence 3467889999999765433221 0 1 112333 4699999999999999753 7999
Q ss_pred C--CceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 70 K--KEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 70 ~--~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+ ++|++|.. ++++| ++.+|+++.||+||+|+|+..+.+++....|++|++..+++++++|.++.++.+ .|+.+
T Consensus 234 ~~~~~V~~I~~-~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l-~~~~~ 308 (484)
T 4dsg_A 234 NSGFQAIAIDA-DAKTI--TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGI-GVKGT 308 (484)
T ss_dssp CGGGCEEEEET-TTTEE--EETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEE-EEESC
T ss_pred CCCceeEEEEe-cCCEE--EECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEE-EEcCC
Confidence 9 56999998 66665 457888999999999999999998733234568999999999999999999999 77653
No 19
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.35 E-value=7.4e-13 Score=107.61 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=82.3
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVTCADGTQYSADRILITVSLGVLKSNLITFVPP 118 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~ 118 (147)
++||+++|+++|++.+... |++|+++++|++|.. .+++ +.|++. +.++.||+||+|+|+..++++ .|+
T Consensus 229 ~~gG~~~l~~~l~~~l~~~-----g~~i~~~~~V~~i~~-~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~l----l~~ 297 (477)
T 3nks_A 229 LRGGLEMLPQALETHLTSR-----GVSVLRGQPVCGLSL-QAEGRWKVSLR-DSSLEADHVISAIPASVLSEL----LPA 297 (477)
T ss_dssp ETTCTTHHHHHHHHHHHHT-----TCEEECSCCCCEEEE-CGGGCEEEECS-SCEEEESEEEECSCHHHHHHH----SCG
T ss_pred ECCCHHHHHHHHHHHHHhc-----CCEEEeCCEEEEEEE-cCCceEEEEEC-CeEEEcCEEEECCCHHHHHHh----ccc
Confidence 7999999999999999654 469999999999998 6666 888775 448999999999999999976 566
Q ss_pred CCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 119 LPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 119 Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
++++..+++++++|+++.++.+ .|+++
T Consensus 298 ~~~~~~~~l~~~~~~~~~~v~l-~~~~~ 324 (477)
T 3nks_A 298 EAAPLARALSAITAVSVAVVNL-QYQGA 324 (477)
T ss_dssp GGHHHHHHHHTCCEEEEEEEEE-EETTC
T ss_pred cCHHHHHHHhcCCCCcEEEEEE-EECCC
Confidence 6778889999999999999999 88865
No 20
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.26 E-value=5.2e-12 Score=103.50 Aligned_cols=94 Identities=17% Similarity=0.149 Sum_probs=74.7
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc------EEEEeC--CC---cEEEcCEEEEecChhHH
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG------VVVTCA--DG---TQYSADRILITVSLGVL 108 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~------v~v~~~--~g---~~~~ad~VI~t~P~~~l 108 (147)
++||+++|+++|++.++.. +|++|++|++|.. .+++ +.|++. +| ++++||+||+|+|+..+
T Consensus 238 ~~GG~~~l~~~l~~~l~~~-------~i~~~~~V~~I~~-~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l 309 (504)
T 1sez_A 238 FLGGMQTLTDAICKDLRED-------ELRLNSRVLELSC-SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDV 309 (504)
T ss_dssp ETTCTHHHHHHHHTTSCTT-------TEETTCCEEEEEE-ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHH
T ss_pred eCcHHHHHHHHHHhhcccc-------eEEcCCeEEEEEe-cCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHH
Confidence 6999999999999998632 7999999999998 5555 666654 56 57899999999999999
Q ss_pred hhCCc-ccCCCCCHHHHHHHhcCCCcceeEEEEEeCCC
Q psy13542 109 KSNLI-TFVPPLPPKKLTAIELTNLTSIQQDTLFQIPT 145 (147)
Q Consensus 109 ~~~~~-~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~ 145 (147)
++++. ...++++++. ++++.++++.|+++ .|++
T Consensus 310 ~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l-~~~~ 343 (504)
T 1sez_A 310 KSMKIAKRGNPFLLNF---IPEVDYVPLSVVIT-TFKR 343 (504)
T ss_dssp HTSEEESSSSBCCCTT---SCCCCEEEEEEEEE-EEEG
T ss_pred HHHhhcccCCcccHHH---HhcCCCCceEEEEE-EEch
Confidence 98732 1124455543 77889999999999 8764
No 21
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.25 E-value=1.4e-11 Score=98.64 Aligned_cols=125 Identities=12% Similarity=0.057 Sum_probs=95.3
Q ss_pred ccCCCChhcccccccccccc---CCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-E
Q psy13542 11 YDGSENWFETSARGLDSFTD---LEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-V 86 (147)
Q Consensus 11 ~~~g~~~~~~S~~~~~~~~~---~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v 86 (147)
..++.+++++|+..+..... ..+...+ +.||++.++++|++.+... |++|+++++|++|.. ++++++ |
T Consensus 161 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~gG~~~l~~~l~~~~~~~-----G~~i~~~~~V~~i~~-~~~~~~gv 232 (425)
T 3ka7_A 161 WALSLKSDEVPVEEVFEIIENMYRFGGTGI--PEGGCKGIIDALETVISAN-----GGKIHTGQEVSKILI-ENGKAAGI 232 (425)
T ss_dssp HHHSSCGGGSBHHHHHHHHHHHHHHCSCEE--ETTSHHHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-ETTEEEEE
T ss_pred HHhCCCcccchHHHHHHHHHHHHhcCCccc--cCCCHHHHHHHHHHHHHHc-----CCEEEECCceeEEEE-ECCEEEEE
Confidence 34677888888865433221 1233333 6999999999999998754 569999999999998 667776 6
Q ss_pred EeCCCcEEEcCEEEEecChhHHhhCCcccCCCC--CHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 87 TCADGTQYSADRILITVSLGVLKSNLITFVPPL--PPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 87 ~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~L--p~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
+++ |+++.||+||+|+|+..+.+++. ..+.+ |++..+.++++.++...++++ .|+++
T Consensus 233 ~~~-g~~~~ad~VV~a~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~v~l-~~~~~ 291 (425)
T 3ka7_A 233 IAD-DRIHDADLVISNLGHAATAVLCS-EALSKEADAAYFKMVGTLQPSAGIKICL-AADEP 291 (425)
T ss_dssp EET-TEEEECSEEEECSCHHHHHHHTT-TTCCTTTTHHHHHHHHHCCCBEEEEEEE-EESSC
T ss_pred EEC-CEEEECCEEEECCCHHHHHHhcC-CcccccCCHHHHHHhhCcCCCceEEEEe-ecCCC
Confidence 664 77899999999999999987632 12233 888889999999999999998 87764
No 22
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.19 E-value=2.7e-11 Score=99.07 Aligned_cols=118 Identities=14% Similarity=0.183 Sum_probs=65.5
Q ss_pred CCChhccccccccccccCCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEeCCCc
Q psy13542 14 SENWFETSARGLDSFTDLEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTCADGT 92 (147)
Q Consensus 14 g~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~~~g~ 92 (147)
+.+.+..+++.+..+....+..++ ++||+++|+++|++.+.+. |++|++|++|++|.. ++++++ |++.||+
T Consensus 192 ~~p~~~~~~~~~~~~~~~~~G~~~--p~GG~~~l~~aL~~~~~~~-----Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~ 263 (501)
T 4dgk_A 192 GNPFATSSIYTLIHALEREWGVWF--PRGGTGALVQGMIKLFQDL-----GGEVVLNARVSHMET-TGNKIEAVHLEDGR 263 (501)
T ss_dssp SCC--CCCTHHHHHHHHSCCCEEE--ETTHHHHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-ETTEEEEEEETTSC
T ss_pred CCcchhhhhhhhhhhhhccCCeEE--eCCCCcchHHHHHHHHHHh-----CCceeeecceeEEEe-eCCeEEEEEecCCc
Confidence 333333333333333333333343 7999999999999998754 679999999999998 667765 8899999
Q ss_pred EEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCc-ceeEEEE
Q psy13542 93 QYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLT-SIQQDTL 140 (147)
Q Consensus 93 ~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g-~~~Kv~l 140 (147)
++.||+||+++++..+...+.. ..+++.+..+.++...++ +..++++
T Consensus 264 ~~~ad~VV~~a~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 264 RFLTQAVASNADVVHTYRDLLS-QHPAAVKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp EEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred EEEcCEEEECCCHHHHHHHhcc-ccccchhhhhhhhccccCCceeEEEe
Confidence 9999999999987765443221 223555556667777664 3445554
No 23
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.17 E-value=6.3e-11 Score=95.09 Aligned_cols=122 Identities=22% Similarity=0.201 Sum_probs=94.1
Q ss_pred cCCCChhcccccccccccc---CCCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe
Q psy13542 12 DGSENWFETSARGLDSFTD---LEGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC 88 (147)
Q Consensus 12 ~~g~~~~~~S~~~~~~~~~---~~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~ 88 (147)
.++.+++++|+..+..... ..+...+ +.||++.++++|++.+... |++|+++++|++|.. +++++ | +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~gG~~~l~~~l~~~~~~~-----G~~i~~~~~V~~i~~-~~~~v-V-~ 224 (421)
T 3nrn_A 155 ADSVSLSDLTALELAKEIRAALRWGGPGL--IRGGCKAVIDELERIIMEN-----KGKILTRKEVVEINI-EEKKV-Y-T 224 (421)
T ss_dssp HHSSCGGGSBHHHHHHHHHHHHHHCSCEE--ETTCHHHHHHHHHHHHHTT-----TCEEESSCCEEEEET-TTTEE-E-E
T ss_pred hcCCCcccCCHHHHHHHHHHHhhcCCcce--ecCCHHHHHHHHHHHHHHC-----CCEEEcCCeEEEEEE-ECCEE-E-E
Confidence 3567788888754433221 1223333 7999999999999999754 579999999999998 77788 6 4
Q ss_pred CCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 89 ADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 89 ~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
.+|+++.||+||+|+|+..+.+++. .+.+|++..++++++.+....++.+ .++++
T Consensus 225 ~~g~~~~ad~Vv~a~~~~~~~~ll~--~~~~~~~~~~~~~~~~~~~~~~v~l-~~~~~ 279 (421)
T 3nrn_A 225 RDNEEYSFDVAISNVGVRETVKLIG--RDYFDRDYLKQVDSIEPSEGIKFNL-AVPGE 279 (421)
T ss_dssp TTCCEEECSEEEECSCHHHHHHHHC--GGGSCHHHHHHHHTCCCCCEEEEEE-EEESS
T ss_pred eCCcEEEeCEEEECCCHHHHHHhcC--cccCCHHHHHHHhCCCCCceEEEEE-EEcCC
Confidence 5677999999999999999987521 2458888889999999998889888 76653
No 24
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.06 E-value=6.3e-10 Score=90.82 Aligned_cols=119 Identities=17% Similarity=0.148 Sum_probs=89.2
Q ss_pred ccCCCChhccccccccccccC---------------C---CCc-eee-ecCCcHHHHHHHHHhhCCCCCCCCCcceEEcC
Q psy13542 11 YDGSENWFETSARGLDSFTDL---------------E---GCF-GVV-WKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLK 70 (147)
Q Consensus 11 ~~~g~~~~~~S~~~~~~~~~~---------------~---g~~-~~~-~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~ 70 (147)
..++.+++++|+.++...... . +.+ .+. +++||+++++++|++.+... |++|++|
T Consensus 168 ~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~-----g~~i~~~ 242 (513)
T 4gde_A 168 KVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKE-----KTRFGEK 242 (513)
T ss_dssp HHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGG-----GEEESGG
T ss_pred hhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhc-----Ceeeecc
Confidence 356778888888765432210 1 111 111 25899999999999999865 6799999
Q ss_pred CceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCC
Q psy13542 71 KEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIP 144 (147)
Q Consensus 71 ~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~ 144 (147)
++|++|.. ++++ +++.+|+++.||+||+|+|++.|.++ .+ ++....+...++|.++..+.+ .|+
T Consensus 243 ~~V~~I~~-~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~----l~--~~~~~~~~~~l~y~~~~~v~l-~~~ 306 (513)
T 4gde_A 243 GKVTKVNA-NNKT--VTLQDGTTIGYKKLVSTMAVDFLAEA----MN--DQELVGLTKQLFYSSTHVIGV-GVR 306 (513)
T ss_dssp GCEEEEET-TTTE--EEETTSCEEEEEEEEECSCHHHHHHH----TT--CHHHHHHHTTCCEEEEEEEEE-EEE
T ss_pred eEEEEEEc-cCCE--EEEcCCCEEECCEEEECCCHHHHHHh----cC--chhhHhhhhcccCCceEEEEE-EEe
Confidence 99999998 6554 55789999999999999999999976 22 345677888999998888877 553
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.01 E-value=1.3e-09 Score=87.35 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=78.9
Q ss_pred cCCCChhccccccccccccC-------CCCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE
Q psy13542 12 DGSENWFETSARGLDSFTDL-------EGCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV 84 (147)
Q Consensus 12 ~~g~~~~~~S~~~~~~~~~~-------~g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v 84 (147)
.++ +++++|+..++.+... .+..+. +.||+++++++|.+.+.. +|++|++|++|.. +++++
T Consensus 169 ~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~l~~~l~~~l~~--------~v~~~~~V~~i~~-~~~~v 236 (424)
T 2b9w_A 169 GYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWT--WADGTQAMFEHLNATLEH--------PAERNVDITRITR-EDGKV 236 (424)
T ss_dssp CCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBC--CTTCHHHHHHHHHHHSSS--------CCBCSCCEEEEEC-CTTCE
T ss_pred ccC-ChHhcCHHHHHHhhhHhhhhcccCCceEE--eCChHHHHHHHHHHhhcc--------eEEcCCEEEEEEE-ECCEE
Confidence 344 4577777665544431 233332 689999999999999974 6999999999998 77789
Q ss_pred EEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcce
Q psy13542 85 VVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSI 135 (147)
Q Consensus 85 ~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~ 135 (147)
.|++.+| ++.||+||+|+|+..+.++ .|++|+++ +.+..+.+...
T Consensus 237 ~v~~~~g-~~~ad~Vv~a~~~~~~~~~----l~~~~~~~-~~~~~~~~~~~ 281 (424)
T 2b9w_A 237 HIHTTDW-DRESDVLVLTVPLEKFLDY----SDADDDER-EYFSKIIHQQY 281 (424)
T ss_dssp EEEESSC-EEEESEEEECSCHHHHTTS----BCCCHHHH-HHHTTCEEEEE
T ss_pred EEEECCC-eEEcCEEEECCCHHHHhhc----cCCCHHHH-HHHhcCCccee
Confidence 9999888 5999999999999988643 56666654 35676766443
No 26
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.71 E-value=1.6e-07 Score=72.51 Aligned_cols=90 Identities=12% Similarity=0.146 Sum_probs=75.6
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEE-cCEEEEecChhHHhhCCcccCCC
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYS-ADRILITVSLGVLKSNLITFVPP 118 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~-ad~VI~t~P~~~l~~~~~~f~p~ 118 (147)
...|++.+.+.+++.+ +|+++++|++|.. ++++++|++.+|+... ||+||+|+|+..+.++ .+.
T Consensus 105 ~~~~~~~l~~~l~~g~----------~i~~~~~v~~i~~-~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~----~~~ 169 (336)
T 1yvv_A 105 GKPGMSAITRAMRGDM----------PVSFSCRITEVFR-GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL----LAA 169 (336)
T ss_dssp ESSCTHHHHHHHHTTC----------CEECSCCEEEEEE-CSSCEEEEETTSCEEEEESEEEECSCHHHHGGG----GTT
T ss_pred cCccHHHHHHHHHccC----------cEEecCEEEEEEE-eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh----hcc
Confidence 4679999999998844 6999999999999 7888999999997764 9999999999998875 232
Q ss_pred CCHHHHHHHhcCCCcceeEEEEEeCCCC
Q psy13542 119 LPPKKLTAIELTNLTSIQQDTLFQIPTE 146 (147)
Q Consensus 119 Lp~~~~~ai~~~~~g~~~Kv~l~~~~~~ 146 (147)
.+....+++.+.|+...++.+ .|+++
T Consensus 170 -~~~l~~~~~~~~~~~~~~~~~-~~~~~ 195 (336)
T 1yvv_A 170 -APKLASVVAGVKMDPTWAVAL-AFETP 195 (336)
T ss_dssp -CHHHHHHHTTCCEEEEEEEEE-EESSC
T ss_pred -CHHHHHHHhhcCccceeEEEE-EecCC
Confidence 345578899999999999999 88764
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.23 E-value=1e-07 Score=76.54 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=71.4
Q ss_pred ccccCCCChhccccccccccc---cCC-C--Ccee-eecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC
Q psy13542 9 NTYDGSENWFETSARGLDSFT---DLE-G--CFGV-VWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP 81 (147)
Q Consensus 9 ~~~~~g~~~~~~S~~~~~~~~---~~~-g--~~~~-~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~ 81 (147)
....|+.+++++|+..+.... ..+ + ...+ .+++||+++++++|++.++ .+|++|++|++|.. .
T Consensus 162 ~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g--------~~I~l~~~V~~I~~-~- 231 (399)
T 1v0j_A 162 TAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHR--------IEVRLNTDWFDVRG-Q- 231 (399)
T ss_dssp HHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTT--------EEEECSCCHHHHHH-H-
T ss_pred HHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCC--------eEEEECCchhhhhh-h-
Confidence 345678899999988763221 111 1 1122 2589999999999998664 48999999999976 2
Q ss_pred CcEEEEeCCCcEE-EcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCC
Q psy13542 82 KGVVVTCADGTQY-SADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIP 144 (147)
Q Consensus 82 ~~v~v~~~~g~~~-~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~ 144 (147)
| + ++ .||+||+|+|+..+.++ .+..++|.++..+.+ .++
T Consensus 232 --v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~s~~~~~~-~~~ 271 (399)
T 1v0j_A 232 --L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWRTLDFEVE-VLP 271 (399)
T ss_dssp --H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEEEEEEEEE-EES
T ss_pred --h-----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcceEEEEEE-EEc
Confidence 2 1 34 69999999999998864 234667777666666 544
No 28
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.07 E-value=1.6e-06 Score=70.27 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=51.7
Q ss_pred ecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 39 WKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 39 ~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
+++||++.++++|++.+... |++|+++++|++|.. .++++.....+|+++.||+||+|+|+..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~~-----G~~i~~~~~V~~I~~-~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAIY-----GGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp EETTCTTHHHHHHHHHHHHH-----TCCCBCSCCCCEEEE-ETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred EeCcCHHHHHHHHHHHHHHc-----CCEEECCCEEEEEEE-eCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 37999999999999877533 458999999999998 6667663335788999999999998863
No 29
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.04 E-value=6.3e-06 Score=68.02 Aligned_cols=64 Identities=16% Similarity=0.271 Sum_probs=51.9
Q ss_pred eeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEecC
Q psy13542 36 GVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 36 ~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~P 104 (147)
.+.|++||++.|+++|++.+... |++|+++++|++|..+.+++ +.|++.+|+++.||+||++..
T Consensus 247 ~~~yp~gG~~~L~~aL~r~~~~~-----Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~ 311 (475)
T 3p1w_A 247 PFIYPLYGLGGIPEGFSRMCAIN-----GGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPS 311 (475)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHC-------CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGG
T ss_pred ceEEECCCHHHHHHHHHHHHHHc-----CCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCC
Confidence 44568999999999999988754 67999999999998733344 568889998999999999983
No 30
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.96 E-value=3.2e-05 Score=66.02 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=48.0
Q ss_pred eecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-CcE-EEEeCCCcEEEcCEEEEe
Q psy13542 38 VWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KGV-VVTCADGTQYSADRILIT 102 (147)
Q Consensus 38 ~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t 102 (147)
.|+.||++.|+++|++.+... |+.|+++++|++|..+.+ +++ .|.+.+|+++.||+||++
T Consensus 371 ~yp~GG~g~L~qaL~r~~~~~-----Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 371 LFPLYGQGELPQCFCRMCAVF-----GGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp EEETTCTTHHHHHHHHHHHHT-----TCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred EEeCCchhHHHHHHHHHHHHc-----CCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 347999999999998877654 679999999999987332 554 345678999999999983
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.93 E-value=6.3e-06 Score=66.99 Aligned_cols=60 Identities=8% Similarity=0.061 Sum_probs=50.2
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC--CCcE-EEEeCCCcEEEcCEEEEecChh
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED--PKGV-VVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~--~~~v-~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
++||++.++++|++.+... |++|+++++|++|.. . ++++ .|++ +|+++.||+||+|+++.
T Consensus 237 p~gG~~~l~~al~~~~~~~-----G~~i~~~~~V~~i~~-~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 237 PMYGLGELPQGFARLSAIY-----GGTYMLDTPIDEVLY-KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp ETTCTTHHHHHHHHHHHHT-----TCEEECSCCCCEEEE-ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eCCCHHHHHHHHHHHHHHc-----CCEEECCCEEEEEEE-ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 7999999999999888543 569999999999998 5 5554 4666 57789999999999875
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.90 E-value=6.2e-06 Score=65.83 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=58.1
Q ss_pred hccccCCCChhccccccccccc---cCC----CCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceE-EEEec
Q psy13542 8 QNTYDGSENWFETSARGLDSFT---DLE----GCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVT-KINWE 79 (147)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~~---~~~----g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~-~I~~~ 79 (147)
.....|+.+++++|+..+.... ... ...+..+++||+++++++|++..+ .+|++|++|+ +|..
T Consensus 155 ~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g--------~~I~l~~~V~~~i~~- 225 (384)
T 2bi7_A 155 YTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHEN--------IKVDLQREFIVEERT- 225 (384)
T ss_dssp HHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCSTT--------EEEEESCCCCGGGGG-
T ss_pred HHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcCC--------CEEEECCeeehhhhc-
Confidence 3455788999999988652111 111 112222489999999999998543 4899999999 8864
Q ss_pred CCCcEEEEeCCCcEEEcCEEEEecChhHHhhC
Q psy13542 80 DPKGVVVTCADGTQYSADRILITVSLGVLKSN 111 (147)
Q Consensus 80 ~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~ 111 (147)
.||+||+|+|+..+.++
T Consensus 226 ---------------~~d~VI~a~p~~~~~~~ 242 (384)
T 2bi7_A 226 ---------------HYDHVFYSGPLDAFYGY 242 (384)
T ss_dssp ---------------GSSEEEECSCHHHHTTT
T ss_pred ---------------cCCEEEEcCCHHHHHHh
Confidence 19999999999998764
No 33
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.84 E-value=4.4e-06 Score=66.29 Aligned_cols=101 Identities=13% Similarity=0.033 Sum_probs=67.4
Q ss_pred hhccccCCCChhcccccccccc--cc-CC----CCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEec
Q psy13542 7 NQNTYDGSENWFETSARGLDSF--TD-LE----GCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE 79 (147)
Q Consensus 7 ~~~~~~~g~~~~~~S~~~~~~~--~~-~~----g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~ 79 (147)
-.....||.+++++|+..+... .. .+ ...+..+++||+++++++|++. . +|++|++|++|..
T Consensus 150 p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g---~-------~i~l~~~V~~i~~- 218 (367)
T 1i8t_A 150 GYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEG---V-------DVKLGIDFLKDKD- 218 (367)
T ss_dssp HHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTT---S-------EEECSCCGGGSHH-
T ss_pred HHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcC---C-------EEEeCCceeeech-
Confidence 3344567899999998766321 11 11 1112225899999999999982 2 8999999999864
Q ss_pred CCCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEEEeCC
Q psy13542 80 DPKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTLFQIP 144 (147)
Q Consensus 80 ~~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l~~~~ 144 (147)
.| ...||+||+|+|+..+.+. .+..++|.++.-+.+ .++
T Consensus 219 ---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~-~~d 257 (367)
T 1i8t_A 219 ---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETE-RHE 257 (367)
T ss_dssp ---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEE-EES
T ss_pred ---hh--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEE-Eec
Confidence 22 1358999999999987653 133556665555555 444
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.54 E-value=6.1e-05 Score=60.75 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=65.2
Q ss_pred hccccCCCChhccccccccccccC---CC---Ccee-eecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC
Q psy13542 8 QNTYDGSENWFETSARGLDSFTDL---EG---CFGV-VWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED 80 (147)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~~~~---~g---~~~~-~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~ 80 (147)
.....||.+++++|+.++...... .. ...+ .+++||+.+|+++|++..+ .+|++|++|+++
T Consensus 179 y~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g--------~~V~l~~~v~~~---- 246 (397)
T 3hdq_A 179 YTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPN--------IKVMLNTDYREI---- 246 (397)
T ss_dssp HHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTT--------EEEEESCCGGGT----
T ss_pred HhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccC--------CEEEECCeEEec----
Confidence 344578999999998765432211 11 1122 2479999999999977553 589999999743
Q ss_pred CCcEEEEeCCCcEEEcCEEEEecChhHHhhCCcccCCCCCHHHHHHHhcCCCcceeEEEE
Q psy13542 81 PKGVVVTCADGTQYSADRILITVSLGVLKSNLITFVPPLPPKKLTAIELTNLTSIQQDTL 140 (147)
Q Consensus 81 ~~~v~v~~~~g~~~~ad~VI~t~P~~~l~~~~~~f~p~Lp~~~~~ai~~~~~g~~~Kv~l 140 (147)
+.++.+|+||+|+|+..+-.. ....+.|.++.-+.+
T Consensus 247 ----------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~ 282 (397)
T 3hdq_A 247 ----------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHE 282 (397)
T ss_dssp ----------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEE
T ss_pred ----------cccccCCEEEEcCCHHHHHHH--------------hcCCCCCceEEEEEE
Confidence 234579999999999988542 233555666655555
No 35
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.44 E-value=0.00013 Score=58.51 Aligned_cols=75 Identities=11% Similarity=0.046 Sum_probs=46.2
Q ss_pred ccccccccccc-cCC-CCceeeecCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEc
Q psy13542 19 ETSARGLDSFT-DLE-GCFGVVWKKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSA 96 (147)
Q Consensus 19 ~~S~~~~~~~~-~~~-g~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~a 96 (147)
++|+...+.+. ... +...++ ++||+++|+++|++.++. +|++|++|++|.. .++++.+.+.+......
T Consensus 293 ~~s~l~~l~~~~~~~~~~~~~~-i~GG~~~l~~~l~~~l~~--------~i~l~~~V~~I~~-~~~gv~v~~~~~~~~~g 362 (376)
T 2e1m_A 293 HLAFFHSFLGRSDIDPRATYWE-IEGGSRMLPETLAKDLRD--------QIVMGQRMVRLEY-YDPGRDGHHGELTGPGG 362 (376)
T ss_dssp TSBHHHHHHHCSCSCTTCCEEE-ETTCTTHHHHHHHHHGGG--------TEECSEEEEEEEE-CCCC-------------
T ss_pred hhhHHHHHHHhhhhccCCceEE-ECCcHHHHHHHHHHhcCC--------cEEecCeEEEEEE-CCCceEEEeCCCcCCCC
Confidence 66666655433 122 334444 799999999999999974 7999999999999 77777776654444566
Q ss_pred CEEEEec
Q psy13542 97 DRILITV 103 (147)
Q Consensus 97 d~VI~t~ 103 (147)
.+|.+.+
T Consensus 363 ~~~~~~~ 369 (376)
T 2e1m_A 363 PAVAIQT 369 (376)
T ss_dssp CCEEEEE
T ss_pred CeeEEEe
Confidence 7777665
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.98 E-value=0.00099 Score=53.15 Aligned_cols=58 Identities=16% Similarity=0.251 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCC---ceEEEEecCCCcEE-EEeCCCcEEEcCEEEEecChhH
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKK---EVTKINWEDPKGVV-VTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~---~V~~I~~~~~~~v~-v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
...+.++|.+.+... |.+|++++ +|++|.. .++++. |++.+|+++.||+||+|+-...
T Consensus 160 ~~~~~~~L~~~a~~~-----Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 160 ARNALVAAAREAQRM-----GVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHHT-----TCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhc-----CCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 467777887777543 56999999 9999998 677887 9999998899999999997664
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.90 E-value=0.00077 Score=52.30 Aligned_cols=55 Identities=15% Similarity=0.212 Sum_probs=45.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.++|.+.+... |.+|+++++|++|.. +++++.|++.+| ++.||+||+|+-..
T Consensus 154 ~~~~~~l~~~a~~~-----Gv~i~~~~~V~~i~~-~~~~~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 154 DALHQGYLRGIRRN-----QGQVLCNHEALEIRR-VDGAWEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCCCCEEEE-ETTEEEEECSSE-EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCCEEEEEEE-eCCeEEEEeCCC-EEEcCEEEECCChh
Confidence 67777777776543 469999999999998 667799999888 89999999998764
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.80 E-value=0.002 Score=49.57 Aligned_cols=58 Identities=9% Similarity=0.121 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEEeCCC--cEEEcCEEEEecChhH
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVTCADG--TQYSADRILITVSLGV 107 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~~~~g--~~~~ad~VI~t~P~~~ 107 (147)
...+.+.|.+.+... |.+|+++++|++|.. ++++ +.|.+.+| .++.||+||+|+-...
T Consensus 149 ~~~~~~~l~~~~~~~-----Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESD-----GAQLVFHTPLIAGRV-RPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-CTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHC-----CCEEECCCEEEEEEE-cCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 456777777776543 569999999999998 5554 88988888 4899999999997653
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.75 E-value=0.0018 Score=54.99 Aligned_cols=57 Identities=5% Similarity=0.121 Sum_probs=47.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.++|.+.+... |.+|+++++|++|.. ++++|.|++.+|.++.||.||+|+-...
T Consensus 417 ~~l~~aL~~~a~~~-----Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQ-----GLQIYYQYQLQNFSR-KDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCeeeEEEE-eCCeEEEEECCCCEEECCEEEECCCcch
Confidence 67777777766543 469999999999998 7778999998888999999999997663
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.66 E-value=0.0023 Score=54.50 Aligned_cols=56 Identities=7% Similarity=0.076 Sum_probs=46.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCc-EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGT-QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~-~~~ad~VI~t~P~~ 106 (147)
..+.++|.+.+... |.+|+++++|++|.. +++++.|.+.+|+ ++.||+||+|+...
T Consensus 412 ~~l~~aL~~~a~~~-----Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQN-----GMTCHYQHELQRLKR-IDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCCEEEEEE-CSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCeEeEEEE-eCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 67778887766543 469999999999999 7778999998887 89999999999776
No 41
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.52 E-value=0.0043 Score=48.04 Aligned_cols=56 Identities=25% Similarity=0.334 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+++.+++|++|.. +++++.|++.+| +++||+||+|+....
T Consensus 149 ~~l~~~l~~~~~~~-----G~~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEA-----GCAQLFNCPVTAIRH-DDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-CSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCCEEEEEEE-cCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 36667776666433 458999999999998 667798988888 599999999998754
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.43 E-value=0.005 Score=47.93 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=44.1
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++.+++|++|.. +++++. |++.+| +++||+||+|+-..
T Consensus 149 ~~l~~~l~~~~~~~-----Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 149 FEATTAFAVKAKEY-----GAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchh
Confidence 56667776666433 459999999999998 677887 888888 89999999999764
No 43
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.38 E-value=0.011 Score=46.02 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=43.5
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..|-+.|.+.++. .|+++++|+++...++++++|++.||++++||.||-|=-.
T Consensus 112 ~~L~~~L~~~~~~--------~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~ 164 (412)
T 4hb9_A 112 TELKEILNKGLAN--------TIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGS 164 (412)
T ss_dssp HHHHHHHHTTCTT--------TEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCT
T ss_pred HHHHHHHHhhccc--------eEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCC
Confidence 4566777777764 7999999999987455679999999999999999988544
No 44
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.37 E-value=0.0098 Score=46.87 Aligned_cols=55 Identities=9% Similarity=0.173 Sum_probs=46.4
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..|.+.|.+.+.. ..|+++++|++|.. ++++++|++.+|++++||.||.|.-...
T Consensus 128 ~~l~~~L~~~~~~-------~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 128 NDLRAILLNSLEN-------DTVIWDRKLVMLEP-GKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHHTSCT-------TSEEESCCEEEEEE-CSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHHhhcCC-------CEEEECCEEEEEEE-CCCEEEEEECCCcEEecCEEEECCCcch
Confidence 5677788888764 27999999999998 7778999999998999999999987643
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.36 E-value=0.0043 Score=49.99 Aligned_cols=59 Identities=17% Similarity=0.311 Sum_probs=48.4
Q ss_pred CCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 41 KGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 41 ~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
......+.+.|.+.+... |.+|+++++|++|.. +++++.|++.+| +++||+||+|+-..
T Consensus 128 ~~~~~~l~~~L~~~l~~~-----Gv~i~~~~~V~~i~~-~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEA-----GVQLRLETSIGEVER-TASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp SSCHHHHHHHHHHHHHHH-----TCEEECSCCEEEEEE-ETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred CCCHHHHHHHHHHHHHHC-----CCEEEECCEEEEEEE-eCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 445678888888777543 459999999999998 677899999888 89999999998654
No 46
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.33 E-value=0.0035 Score=48.75 Aligned_cols=55 Identities=13% Similarity=0.175 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++++++|++|.. +++++.|++.+| ++.||.||+|+...
T Consensus 164 ~~~~~~l~~~~~~~-----g~~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKML-----GAEIFEHTPVLHVER-DGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHT-----TCEEETTCCCCEEEC-SSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCCcEEEEEE-ECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 56777777766543 458999999999998 777888888888 89999999999763
No 47
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.31 E-value=0.011 Score=46.60 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 43 G~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
+...+.+.|.+.+.. .+|+++++|++|.. ++++++|++.+|++++||.||.|.-..
T Consensus 97 ~~~~l~~~L~~~~~~-------~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 97 SYDSIYGGLYELFGP-------ERYHTSKCLVGLSQ-DSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp EHHHHHHHHHHHHCS-------TTEETTCCEEEEEE-CSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred CHHHHHHHHHHhCCC-------cEEEcCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECCCcc
Confidence 346788888887753 48999999999998 778899999999999999999997554
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.31 E-value=0.0048 Score=48.41 Aligned_cols=55 Identities=22% Similarity=0.291 Sum_probs=42.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. +++++.|++.+| +++||.||+|+-..
T Consensus 153 ~~~~~~l~~~a~~~-----Gv~i~~~~~V~~i~~-~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAA-----GATLRAGETVTELVP-DADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCCEEEEEE-ETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHc-----CCEEECCCEEEEEEE-cCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 45666666655432 458999999999998 667888888777 89999999999543
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.28 E-value=0.0056 Score=49.37 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=45.7
Q ss_pred cHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEecCh
Q psy13542 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 43 G~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
....+.+.|.+.+... |.+|+++++|++|.. ++++ +.|++.+|++++||.||+|+-.
T Consensus 132 ~~~~l~~~L~~~~~~~-----GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg 189 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDL-----GVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGG 189 (447)
T ss_dssp CHHHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCC
T ss_pred CHHHHHHHHHHHHHHC-----CCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCC
Confidence 3577888887777543 469999999999997 5566 7888888977999999999853
No 50
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.27 E-value=0.0056 Score=47.62 Aligned_cols=55 Identities=20% Similarity=0.419 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++.+++|++|.. +++++.|++.+| +++||.||+|+-..
T Consensus 150 ~~~~~~l~~~~~~~-----Gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 150 ENCIRAYRELAEAR-----GAKVLTHTRVEDFDI-SPDSVKIETANG-SYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-CSSCEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCcEEEEEEe-cCCeEEEEeCCC-EEEeCEEEEecCcc
Confidence 57777777776543 469999999999998 677788888777 79999999999765
No 51
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.13 E-value=0.011 Score=46.37 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
..+.+.+.+.+... |.+++++++|++|.. +++++.|++.+|+++.||.||+|+.
T Consensus 187 ~~~~~~l~~~l~~~-----gv~i~~~~~v~~i~~-~~~~~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 187 PAAAKAVQAGLEGL-----GVRFHLGPVLASLKK-AGEGLEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp HHHHHHHHHHHHTT-----TCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHc-----CCEEEeCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECcC
Confidence 34555566655433 469999999999998 6667888888998999999999985
No 52
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.03 E-value=0.011 Score=46.60 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=45.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+.. .+|+++++|++|.. ++++++|++.+|++++||.||.|.-..
T Consensus 127 ~~l~~~L~~~~~~-------~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGR-------DSVQFGKRVTRCEE-DADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCG-------GGEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCc-------CEEEECCEEEEEEe-cCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 5667777777753 28999999999998 778899999999999999999997553
No 53
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.00 E-value=0.0081 Score=41.93 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=41.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++ +|++|.. +++++.|++.+| ++.||.||+|+-.
T Consensus 56 ~~~~~~l~~~~~~~-----gv~v~~~-~v~~i~~-~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 56 EELLRRLEAHARRY-----GAEVRPG-VVKGVRD-MGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEC-CCCEEEE-CSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHc-----CCEEEeC-EEEEEEE-cCCEEEEEECCC-EEEECEEEECCCC
Confidence 45666666655433 3589999 9999998 667788998888 8999999999854
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=95.99 E-value=0.011 Score=49.37 Aligned_cols=57 Identities=9% Similarity=0.205 Sum_probs=45.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+|+++++|++|.. .++++ .|++.+|+++.||.||+|+-...
T Consensus 220 ~~l~~~L~~~l~~~-----Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIEL-----GGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhc-----CCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 56777777766543 469999999999998 66655 48889998999999999986543
No 55
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.98 E-value=0.014 Score=47.68 Aligned_cols=41 Identities=22% Similarity=0.373 Sum_probs=35.7
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. +++++.|++.+|+++.||.||+|+..
T Consensus 237 GV~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 237 GVRLFKNARAASVTR-TGAGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp TCEEETTCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEE-eCCEEEEEECCCcEEEcCEEEECCCC
Confidence 459999999999998 66678888888989999999999853
No 56
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.97 E-value=0.013 Score=47.40 Aligned_cols=55 Identities=11% Similarity=0.199 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. .++++.|.+.+|+++.||.||+|+..
T Consensus 202 ~~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEKN-----DVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhc-----CCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 33444444444332 469999999999998 77788888889989999999999854
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.95 E-value=0.011 Score=48.05 Aligned_cols=41 Identities=15% Similarity=0.299 Sum_probs=36.5
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. .++++.|++.+|+++.||.||+|+..
T Consensus 246 Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 246 GISIIYEATVSQVQS-TENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp TCEEESSCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEe-eCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 458999999999998 77788999999989999999999864
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.84 E-value=0.018 Score=45.73 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=40.6
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. +++++ .|.+.+|+++.||.||+++..
T Consensus 195 ~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 195 ALSEFYQAEHRAH-----GVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHT-----TCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHhC-----CCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 3444444444332 469999999999998 66665 688899999999999999853
No 59
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.81 E-value=0.011 Score=47.21 Aligned_cols=56 Identities=16% Similarity=0.309 Sum_probs=43.9
Q ss_pred cHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC----CCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED----PKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 43 G~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~----~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.-..+.+.|.+.+... |.+|+++++|++|.. + ++++.|++.+| +++||+||+|+-.
T Consensus 107 ~~~~l~~~L~~~~~~~-----Gv~i~~~~~v~~i~~-~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~ 166 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKY-----GAKILLRSEVSQVER-IQNDEKVRFVLQVNST-QWQCKNLIVATGG 166 (401)
T ss_dssp CTHHHHHHHHHHHHHH-----TCEEECSCCEEEEEE-CCSCSSCCEEEEETTE-EEEESEEEECCCC
T ss_pred CHHHHHHHHHHHHHHC-----CCEEEeCCEEEEEEc-ccCcCCCeEEEEECCC-EEECCEEEECCCC
Confidence 3466777777766533 458999999999997 5 56788988877 8999999999843
No 60
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.62 E-value=0.03 Score=45.05 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=42.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. .++++.|++.+| ++.||.||+|+..
T Consensus 189 ~~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQ-----AVIFHFEETVLGIEE-TANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp HHHHHHHHHHHHTT-----TEEEEETCCEEEEEE-CSSCEEEEESSC-EEEESEEEECSCC
T ss_pred HHHHHHHHHHHHHc-----CCEEEeCCEEEEEEc-cCCeEEEEECCC-EEEeCEEEECcCC
Confidence 44555555555543 569999999999997 667788888777 8999999999854
No 61
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.60 E-value=0.021 Score=45.18 Aligned_cols=55 Identities=16% Similarity=0.260 Sum_probs=40.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. +++++ .|.+.+|+++.||.||+++..
T Consensus 184 ~~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSGA-----GIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhC-----CcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 34444444444332 469999999999987 55555 588899999999999999854
No 62
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.53 E-value=0.028 Score=45.94 Aligned_cols=53 Identities=17% Similarity=0.298 Sum_probs=40.7
Q ss_pred HHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 47 VFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 47 l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
+.+.+.+.+... |.++++++.|++|.. .++.+.|++.+|+++.||.||+++..
T Consensus 228 ~~~~~~~~l~~~-----GV~v~~~~~V~~i~~-~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 228 LSNWTMEKVRRE-----GVKVMPNAIVQSVGV-SSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHTT-----TCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHhc-----CCEEEeCCEEEEEEe-cCCeEEEEECCCCEEECCEEEECCCC
Confidence 444444444433 569999999999987 55677888899999999999999853
No 63
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.51 E-value=0.031 Score=43.80 Aligned_cols=57 Identities=12% Similarity=0.314 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE--EEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV--VVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v--~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... + |.+|+++++|++|.. +++++ .|++.+|++++||.||.|.-..
T Consensus 107 ~~l~~~L~~~~~~~---~-gv~i~~~~~v~~i~~-~~~~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 107 ESLRRLVLEKIDGE---A-TVEMLFETRIEAVQR-DERHAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp HHHHHHHHHHHTTC---T-TEEEECSCCEEEEEE-CTTSCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhhhc---C-CcEEEcCCEEEEEEE-cCCceEEEEEECCCCEEECCEEEECCCCC
Confidence 56777777777541 0 358999999999998 77788 8999999899999999998654
No 64
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.41 E-value=0.019 Score=46.14 Aligned_cols=55 Identities=24% Similarity=0.233 Sum_probs=41.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. +++++.+++.+|+++.+|.||+|+..
T Consensus 208 ~~~~~~l~~~l~~~-----Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 208 LEVSRAAERVFKKQ-----GLTIRTGVRVTAVVP-EAKGARVELEGGEVLEADRVLVAVGR 262 (455)
T ss_dssp HHHHHHHHHHHHHH-----TCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHC-----CCEEEECCEEEEEEE-eCCEEEEEECCCeEEEcCEEEECcCC
Confidence 34445555544332 458999999999998 66678888888889999999999843
No 65
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.33 E-value=0.021 Score=44.53 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=42.2
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEecChh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+.+.|.+.+... |.+++++++|++|.. ++++ +.|++.+| ++.||.||+|+-..
T Consensus 175 ~~~~~l~~~~~~~-----g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 175 HVAWAFARKANEM-----GVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHT-----TCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHC-----CCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 6667776666433 459999999999998 5555 56888888 79999999999754
No 66
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.29 E-value=0.035 Score=45.30 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=39.7
Q ss_pred HHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEecC
Q psy13542 47 VFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPK-GVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 47 l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~P 104 (147)
+.+.+.+.+... |.+++++++|++|.. +++ .+.|++.+|+++.+|.||+|+.
T Consensus 233 ~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G 285 (490)
T 1fec_A 233 LRKQLTEQLRAN-----GINVRTHENPAKVTK-NADGTRHVVFESGAEADYDVVMLAIG 285 (490)
T ss_dssp HHHHHHHHHHHT-----TEEEEETCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHHHhC-----CCEEEeCCEEEEEEE-cCCCEEEEEECCCcEEEcCEEEEccC
Confidence 444444444433 469999999999998 543 4788888998999999999985
No 67
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.26 E-value=0.024 Score=46.68 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=39.9
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc----EEEEeCCCc-EEEcCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG----VVVTCADGT-QYSADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~----v~v~~~~g~-~~~ad~VI~t~P 104 (147)
.+.+.+.+.+... |.+++++++|++|.. .+++ +.|++.+|+ ++.||.||+|+.
T Consensus 256 ~~~~~l~~~l~~~-----GV~i~~~~~V~~i~~-~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 256 ETRAYVLDRMKEQ-----GMEIISGSNVTRIEE-DANGRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp HHHHHHHHHHHHT-----TCEEESSCEEEEEEE-CTTSBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred HHHHHHHHHHHhC-----CcEEEECCEEEEEEE-cCCCceEEEEEEECCCcEEEEcCEEEECcC
Confidence 3444555555433 469999999999987 5455 778888887 899999999984
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.23 E-value=0.031 Score=42.46 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=42.5
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... +.++++++.|++|.. .++.+.|++.+|+++.+|+||+|+-.
T Consensus 65 ~~~~~~l~~~~~~~-----~~~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 65 KDLVKGLVEQVAPF-----NPVYSLGERAETLER-EGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHHHGGG-----CCEEEESCCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHc-----CCEEEeCCEEEEEEE-CCCEEEEEECCCCEEEeCEEEECCCC
Confidence 45666665555422 237899999999998 55678899888888999999999865
No 69
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.21 E-value=0.047 Score=42.11 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=42.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPK-GVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... +.++++++.|++|.. .++ .+.|++.+|+++.+|+||+|+-.
T Consensus 74 ~~~~~~l~~~~~~~-----~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 74 IDLVESLWAQAERY-----NPDVVLNETVTKYTK-LDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHHHTT-----CCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHh-----CCEEEcCCEEEEEEE-CCCceEEEEECCCcEEEeeEEEEccCC
Confidence 55666666655432 348999999999998 544 78899999989999999999865
No 70
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.19 E-value=0.024 Score=45.04 Aligned_cols=41 Identities=24% Similarity=0.265 Sum_probs=34.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. ++....|++.+|+++.||.||+++..
T Consensus 199 GV~i~~~~~v~~i~~-~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 199 GVQVELGTGVVGFSG-EGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp TCEEECSCCEEEEEC-SSSCCEEEETTSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEec-cCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 458999999999987 55445788899999999999999854
No 71
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.12 E-value=0.042 Score=44.92 Aligned_cols=40 Identities=13% Similarity=0.318 Sum_probs=34.2
Q ss_pred cceEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDP-KGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~-~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. .+ +.+.|++.+|+++.||.||+++.
T Consensus 249 GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G 289 (495)
T 2wpf_A 249 GIEIMTNENPAKVSL-NTDGSKHVTFESGKTLDVDVVMMAIG 289 (495)
T ss_dssp TCEEEESCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEE-cCCceEEEEECCCcEEEcCEEEECCC
Confidence 469999999999987 54 34788888998999999999984
No 72
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.03 E-value=0.04 Score=44.58 Aligned_cols=40 Identities=23% Similarity=0.332 Sum_probs=34.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCc-EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGT-QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~-~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. .++++.|++.+|+ ++.+|.||+|+.
T Consensus 221 gv~i~~~~~v~~i~~-~~~~~~v~~~~G~~~i~~D~vv~a~G 261 (463)
T 2r9z_A 221 GIETHLEFAVAALER-DAQGTTLVAQDGTRLEGFDSVIWAVG 261 (463)
T ss_dssp TCEEESSCCEEEEEE-ETTEEEEEETTCCEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEE-eCCeEEEEEeCCcEEEEcCEEEECCC
Confidence 458999999999987 5556888889998 899999999974
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.96 E-value=0.06 Score=40.80 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=35.3
Q ss_pred ceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVV-VTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~-v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+++++++|++|.. .++++. |++.+| ++.||+||+|+-..
T Consensus 91 ~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 91 LPVLRPIRVQRVSH-FGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp CCEECSCCEEEEEE-ETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CEEEcCCEEEEEEE-CCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 37999999999998 777888 998888 89999999999753
No 74
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.85 E-value=0.045 Score=44.01 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=34.0
Q ss_pred cceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPK-GVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. .++ .+.|++.+|+++.+|.||+|+.
T Consensus 222 Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~i~~D~vv~a~G 262 (450)
T 1ges_A 222 GPQLHTNAIPKAVVK-NTDGSLTLELEDGRSETVDCLIWAIG 262 (450)
T ss_dssp SCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEE-eCCcEEEEEECCCcEEEcCEEEECCC
Confidence 458999999999997 544 4788888998999999999983
No 75
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.82 E-value=0.067 Score=40.27 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEecCh
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPK-GVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~-~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
...+.+.+.+.+... |.+++++++|++|.. .++ .+.|++.+|+ +.+|+||+|+-.
T Consensus 66 ~~~~~~~~~~~~~~~-----~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 66 AQELINNLKEQMAKF-----DQTICLEQAVESVEK-QADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHHTTS-----CCEEECSCCEEEEEE-CTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHh-----CCcEEccCEEEEEEE-CCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 356777777766543 358999999999998 544 7899999885 999999999876
No 76
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.67 E-value=0.039 Score=47.92 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=44.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.++|++.+... |.+|+.+++|++|.. +++++ .|.+.+| +++||+||+|+-...
T Consensus 151 ~~l~~~L~~~a~~~-----Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESA-----GVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHc-----CCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 46777777776543 469999999999998 66665 5778888 899999999996653
No 77
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.67 E-value=0.052 Score=43.74 Aligned_cols=53 Identities=19% Similarity=0.330 Sum_probs=39.5
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc-EEEE-eCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG-VVVT-CADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~-v~v~-~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. .+++ +.|+ +.+|+ +.||.||+|+..
T Consensus 212 ~~~~~l~~~l~~~-----Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 212 DMRRGLHAAMEEK-----GIRILCEDIIQSVSA-DADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHHT-----TCEEECSCCEEEEEE-CTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHHHHHHC-----CCEEECCCEEEEEEE-cCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 3444454444432 469999999999998 5444 7888 88997 999999999854
No 78
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.65 E-value=0.069 Score=43.56 Aligned_cols=54 Identities=19% Similarity=0.265 Sum_probs=40.1
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-CcEEEEeCCCcE-EEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KGVVVTCADGTQ-YSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~v~v~~~~g~~-~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. .+ +.+.|++.+|++ +.+|.||+++..
T Consensus 218 ~~~~~l~~~l~~~-----gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 218 SVINVLENDMKKN-----NINIVTFADVVEIKK-VSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHT-----TCEEECSCCEEEEEE-SSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred hhHHHHHHHHHhC-----CCEEEECCEEEEEEE-cCCceEEEEECCCcEEEECCEEEECCCC
Confidence 3444444544433 468999999999987 44 347888889987 999999999853
No 79
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.62 E-value=0.049 Score=44.17 Aligned_cols=40 Identities=10% Similarity=0.189 Sum_probs=33.5
Q ss_pred cceEEcCCceEEEEecCCCc--EEEEeCCC-cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKG--VVVTCADG-TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~--v~v~~~~g-~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. .+++ +.|++.+| +++.+|.||+|+.
T Consensus 240 Gv~i~~~~~v~~i~~-~~~~~~~~v~~~~G~~~i~~D~vv~a~G 282 (479)
T 2hqm_A 240 GINVHKLSKIVKVEK-NVETDKLKIHMNDSKSIDDVDELIWTIG 282 (479)
T ss_dssp TCEEECSCCEEEEEE-CC-CCCEEEEETTSCEEEEESEEEECSC
T ss_pred CeEEEeCCEEEEEEE-cCCCcEEEEEECCCcEEEEcCEEEECCC
Confidence 458999999999987 5444 78888899 7899999999985
No 80
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.41 E-value=0.054 Score=44.37 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=41.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCc---EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGT---QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~---~~~ad~VI~t~P~~ 106 (147)
..+-+.|.+.+... |.+|+++++|++|.. ++++|+|++.+|. +++||.||.|--..
T Consensus 107 ~~l~~~L~~~~~~~-----gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 107 STTESVLEEWALGR-----GAELLRGHTVRALTD-EGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCEEEEEEE-CSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhC-----CCEEEcCCEEEEEEE-eCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 34455555544322 348999999999998 7788999887775 79999999987654
No 81
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.40 E-value=0.019 Score=45.45 Aligned_cols=55 Identities=22% Similarity=0.280 Sum_probs=38.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceE---------EEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVT---------KINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~---------~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++.+++|+ +|.. +++++.|++.+| +++||.||+|+-..
T Consensus 172 ~~l~~~L~~~~~~~-----Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIGQ-----GAGLLLNTRAELVPGGVRLHRLTV-TNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHTT-----TCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCCEEEeccccccccceEe-eCCeEEEEECCc-EEECCEEEECCCcc
Confidence 55777787777543 46899999999 8887 666777777777 89999999999765
No 82
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.39 E-value=0.1 Score=43.38 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=34.5
Q ss_pred eEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDP-KGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~-~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.++++++|++++++.+ +.++|++.+|+++.||+||+|+-.
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 7999999999998332 368999999999999999999974
No 83
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.33 E-value=0.057 Score=42.14 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=41.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|..++++++.|++ .+|+ +++||.||.|.-..
T Consensus 103 ~~l~~~L~~~~~~~-----g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 103 TEVTRDLMEAREAC-----GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHhc-----CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 44555565555322 3589999999999873345677876 6886 79999999997654
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.33 E-value=0.056 Score=43.28 Aligned_cols=41 Identities=22% Similarity=0.131 Sum_probs=34.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCC---Cc---EEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCAD---GT---QYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~---g~---~~~ad~VI~t~P~~ 106 (147)
..|+++++|++|.. .++++.|++.+ |+ ++.||+||+|+-..
T Consensus 130 ~~i~~~t~V~~v~~-~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 130 PFIKLATDVLDIEK-KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp GGEECSEEEEEEEE-ETTEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred CeEEeCCEEEEEEe-CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 37999999999998 66778887765 76 79999999999763
No 85
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.27 E-value=0.15 Score=39.06 Aligned_cols=40 Identities=20% Similarity=0.203 Sum_probs=34.5
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+++++++|++|.. .++++.|++.+| ++.||+||+|+-..
T Consensus 103 v~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 103 LNIFENTVVTNISA-DDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp CEEECSCCEEEEEE-CSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CeEEeCCEEEEEEE-CCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 38999999999998 667888988887 69999999998754
No 86
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.27 E-value=0.11 Score=42.90 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=34.9
Q ss_pred ceEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDP-KGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~-~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..|+++++|+++.++.+ +.++|++.+|++++||+||+|+-.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 47999999999998333 468999999989999999999964
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.21 E-value=0.091 Score=39.27 Aligned_cols=55 Identities=20% Similarity=0.328 Sum_probs=41.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.+.+.+... |.++++ +.|.+|.. .++.+.|++.+|+++.+|++|+|+-..
T Consensus 70 ~~~~~~~~~~~~~~-----~v~~~~-~~v~~i~~-~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKY-----EVPVLL-DIVEKIEN-RGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTT-----TCCEEE-SCEEEEEE-C--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEE-EEEEEEEe-cCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 45666665555432 347888 99999998 777899999998899999999998654
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.18 E-value=0.11 Score=43.04 Aligned_cols=40 Identities=28% Similarity=0.287 Sum_probs=34.5
Q ss_pred eEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDP-KGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~-~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.|+++++|+++.++.+ +.++|++.+|+++.||+||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 7999999999998333 368999999989999999999974
No 89
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.11 E-value=0.12 Score=38.75 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=41.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC--CCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED--PKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~--~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|+.|..+. ++.+.|++.+|+++.+|++|+|+-.
T Consensus 56 ~~~~~~~~~~~~~~-----~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 56 QKLAGALKVHVDEY-----DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA 113 (310)
T ss_dssp HHHHHHHHHHHHTS-----CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC
Confidence 45555555555332 35899999999998621 2368888888989999999999865
No 90
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.08 E-value=0.056 Score=44.29 Aligned_cols=56 Identities=16% Similarity=0.036 Sum_probs=41.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCc---EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGT---QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~---~~~ad~VI~t~P~~ 106 (147)
..+-+.|.+.+... |.+|+++++|++|.. ++++|+|++.++. +++||.||.|--..
T Consensus 106 ~~l~~~L~~~~~~~-----gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 106 SVTETHLEQWATGL-----GADIRRGHEVLSLTD-DGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEETCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred HHHHHHHHHHHHHC-----CCEEECCcEEEEEEE-cCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 34445555444322 348999999999998 7778888887764 79999999987654
No 91
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.07 E-value=0.084 Score=42.53 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=31.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC--CC--cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA--DG--TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~--~g--~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. +++++.|++. +| +++.+|.||+|+.
T Consensus 230 gv~i~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 230 KMKFMTSTKVVGGTN-NGDSVSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp CCEEECSCEEEEEEE-CSSSEEEEEECC---EEEEEESEEEECSC
T ss_pred CcEEEeCCEEEEEEE-cCCeEEEEEEcCCCceEEEECCEEEECCC
Confidence 458999999999998 6666777765 66 6799999999984
No 92
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.06 E-value=0.084 Score=42.32 Aligned_cols=55 Identities=15% Similarity=0.283 Sum_probs=38.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. .++++.....+|+++.||.||+++..
T Consensus 191 ~~~~~~l~~~l~~~-----Gv~i~~~~~v~~i~~-~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 191 KEFTDILAKDYEAH-----GVNLVLGSKVAAFEE-VDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESSCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCE
T ss_pred hhHHHHHHHHHHHC-----CCEEEcCCeeEEEEc-CCCeEEEEEeCCCEEECCEEEECcCC
Confidence 34445555555433 469999999999986 55666533347889999999999853
No 93
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.03 E-value=0.087 Score=42.46 Aligned_cols=54 Identities=28% Similarity=0.300 Sum_probs=39.3
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCC---cEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADG---TQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g---~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. +++++.++..++ +++.+|.||+++..
T Consensus 222 ~~~~~l~~~l~~~-----Gv~v~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 222 QVAKEAQKILTKQ-----GLKILLGARVTGTEV-KNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHHHHHHHT-----TEEEEETCEEEEEEE-CSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhC-----CCEEEECCEEEEEEE-cCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 3444444444332 468999999999998 777777776654 67999999999864
No 94
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.90 E-value=0.068 Score=43.32 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=39.5
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCC----CcEEEcCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD----GTQYSADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~----g~~~~ad~VI~t~P 104 (147)
.+.+.+.+.+... |.+++++++|.+|.. +++++.|++.+ |+++.+|.||+++.
T Consensus 227 ~~~~~l~~~l~~~-----gV~i~~~~~v~~i~~-~~~~~~v~~~~~~~~g~~~~~D~vv~a~G 283 (482)
T 1ojt_A 227 DLVKVWQKQNEYR-----FDNIMVNTKTVAVEP-KEDGVYVTFEGANAPKEPQRYDAVLVAAG 283 (482)
T ss_dssp HHHHHHHHHHGGG-----EEEEECSCEEEEEEE-ETTEEEEEEESSSCCSSCEEESCEEECCC
T ss_pred HHHHHHHHHHHhc-----CCEEEECCEEEEEEE-cCCeEEEEEeccCCCceEEEcCEEEECcC
Confidence 3444555555433 568999999999987 55667777766 77899999999984
No 95
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.86 E-value=0.096 Score=40.75 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=39.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. + + .|++.+|++++||.||.|.-..
T Consensus 107 ~~l~~~L~~~~~~~-----gv~i~~~~~v~~i~~-~--~-~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 107 SHLHDALVNRARAL-----GVDISVNSEAVAADP-V--G-RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCCEEEEET-T--T-EEEETTSCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHhc-----CCEEEeCCEEEEEEe-C--C-EEEECCCCEEEcCEEEECCCcc
Confidence 45555555555432 358999999999986 3 4 7888889899999999998654
No 96
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.83 E-value=0.13 Score=37.97 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
...+.+.+.+.+... + +..+ ++..|+.|.. .++++.|++.+|+++.+|+||+|+-.
T Consensus 55 ~~~~~~~~~~~~~~~---~-~v~~-~~~~v~~i~~-~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 55 PGEIIAEARRQIERY---P-TIHW-VEGRVTDAKG-SFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp HHHHHHHHHHHHTTC---T-TEEE-EESCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhc---C-CeEE-EEeEEEEEEE-cCCeEEEEECCCCEEEcCEEEECCCC
Confidence 356677776666532 0 1233 3679999998 66779999999989999999999865
No 97
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=93.80 E-value=0.057 Score=43.00 Aligned_cols=56 Identities=9% Similarity=0.296 Sum_probs=42.1
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEec--------------CCCcE-EEEeCCCcEE--EcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE--------------DPKGV-VVTCADGTQY--SADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~--------------~~~~v-~v~~~~g~~~--~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++.+++|++|..+ +++++ .|.+.+| ++ .||.||+|+-..
T Consensus 181 ~~l~~~L~~~~~~~-----Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 181 EKVVDYYYRRASGA-----GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHhC-----CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 46777777776543 4699999999999861 23344 6778888 68 999999999754
No 98
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.73 E-value=0.18 Score=37.79 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=37.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCC----C--cEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCAD----G--TQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~----g--~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. +++++ .|++.+ | +++.+|.||++++.
T Consensus 184 ~~~~~~l~~~l~~~-----gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVENG-----NIILHTNRTLEEVTG-DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHTS-----SEEEECSCEEEEEEE-CSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhcccC-----CeEEEcCceeEEEEc-CCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 34555665555433 469999999999997 55443 244332 4 57999999999864
No 99
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.70 E-value=0.068 Score=41.92 Aligned_cols=41 Identities=12% Similarity=0.100 Sum_probs=35.8
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.++++++.|+.++. +++...|.+.+|+++.+|.++++.|.
T Consensus 216 gi~v~~~~~v~~v~~-~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKT-DTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp SEEEECTTTTCEEEE-ETTTTEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEeCceEEEEEe-cccceEEEcCCCcEEEeeEEEEecCc
Confidence 568999999999988 66677888999999999999999864
No 100
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.70 E-value=0.13 Score=38.55 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=40.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++ ++|.+|.. .++++.|++.+|+++.+|+||+|+-.
T Consensus 59 ~~~~~~l~~~~~~~-----~v~~~~-~~v~~i~~-~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 59 LDFMQPWQEQCFRF-----GLKHEM-TAVQRVSK-KDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHHTT-----SCEEEC-SCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEE-EEEEEEEE-cCCEEEEEEcCCCEEECCEEEECCCC
Confidence 45566665555432 347887 79999998 66678888888889999999999974
No 101
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.70 E-value=0.046 Score=42.39 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=40.1
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEe---CCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTC---ADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~---~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. +++++. |++ .++.+++||.||.|.-..
T Consensus 102 ~~l~~~L~~~~~~~-----gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 102 DKFDKHLAALAAKA-----GADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHH-----TCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhC-----CCEEEECCEEEEEEE-eCCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 34555555554322 358999999999998 667765 665 355689999999998654
No 102
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.68 E-value=0.13 Score=42.28 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=34.8
Q ss_pred cceEEcCCceEEEEec------------------CCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWE------------------DPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~------------------~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.++++++.|++|..+ .++++.+.+.+|+++.||.||+++..
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 4589999999999862 25567888889999999999999853
No 103
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=93.59 E-value=0.11 Score=43.13 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=40.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-CcE---EEEeCCCc--EEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KGV---VVTCADGT--QYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~v---~v~~~~g~--~~~ad~VI~t~P~ 105 (147)
..+.+.|.+.+... |.+|+++++|++|.. ++ ++| .+...+|+ ++.||.||+|+-.
T Consensus 255 ~~l~~~L~~~~~~~-----gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKR-----NIDLRMNTRGIEVLK-DDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSEEEEEEEE-CTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhc-----CCEEEeCCEeeEeEE-cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 56777777766543 469999999999998 54 543 44444675 6899999999854
No 104
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.58 E-value=0.14 Score=41.63 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=41.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG--VVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~--v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+++.+ +|++|.. ++++ +.|++.+|++++||.||.|.-...
T Consensus 173 ~~l~~~L~~~a~~~-----gv~~~~~-~v~~i~~-~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIAR-----GVRHVVD-DVQHVGQ-DERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEC-CEEEEEE-CTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHC-----CCEEEEC-eEeEEEE-cCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 34555555554322 3589999 9999987 5444 678888898899999999987753
No 105
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.55 E-value=0.058 Score=44.22 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=42.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCC----cEEEEeCCC---cEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPK----GVVVTCADG---TQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~----~v~v~~~~g---~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. +++ ++++++.++ .+++||.||.|.-..
T Consensus 120 ~~l~~~L~~~a~~~-----gv~i~~~~~v~~i~~-~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 120 DKLEPILLAQARKH-----GGAIRFGTRLLSFRQ-HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCEEEEEEE-ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCEEEEEEE-CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 44555555555432 358999999999998 666 888887766 689999999998654
No 106
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.53 E-value=0.094 Score=42.32 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=33.1
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC-C--Cc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA-D--GT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~-~--g~--~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. +++++.|++. + |+ ++.+|.||+|+.
T Consensus 224 gV~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEK-KKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp TCEEECSEEEEEEEE-ETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred CCEEEcCCEEEEEEE-eCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 458999999999997 6666777765 6 76 899999999984
No 107
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.46 E-value=0.066 Score=42.02 Aligned_cols=56 Identities=21% Similarity=0.231 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc--EEEEeCCCc--EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG--VVVTCADGT--QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~--v~v~~~~g~--~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+.+++|++|.. .+++ +.|.+.+|+ +++||.||.|.-..
T Consensus 106 ~~~~~~L~~~a~~~-----gv~i~~~~~v~~i~~-~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 106 GNFDKTLADEAARQ-----GVDVEYEVGVTDIKF-FGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHH-----TCEEECSEEEEEEEE-ETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHhC-----CCEEEcCCEEEEEEE-eCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 34445555544322 358999999999998 5555 456678887 69999999998654
No 108
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=93.40 E-value=0.089 Score=43.62 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-CcE---EEEeCCCc--EEEcCEEEEecCh
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KGV---VVTCADGT--QYSADRILITVSL 105 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~v---~v~~~~g~--~~~ad~VI~t~P~ 105 (147)
-..+.+.|.+.+... |.+|+++++|++|.. ++ ++| .+...+|+ ++.||.||+|+-.
T Consensus 249 ~~~l~~~L~~~~~~~-----gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQ-----GIDTRLNSRVVKLVV-NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHHHT-----TCCEECSEEEEEEEE-CTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhc-----CCEEEeCCEEEEEEE-CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 355777777766533 458999999999998 55 553 34444775 6899999999854
No 109
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.24 E-value=0.05 Score=45.47 Aligned_cols=56 Identities=20% Similarity=0.109 Sum_probs=42.4
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe--CCC-cEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC--ADG-TQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~--~~g-~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. ++++++|++ .+| ++++||.||.|.-..
T Consensus 148 ~~l~~~L~~~a~~~-----gv~i~~~~~v~~l~~-~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 148 SRTEALLAEHAREA-----GAEIPRGHEVTRLRQ-DAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp HHHHHHHHHHHHHH-----TEECCBSCEEEECCB-CSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCEEEEEEE-cCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 44555555555322 358999999999998 778888877 678 789999999998653
No 110
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.22 E-value=0.13 Score=41.50 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=32.5
Q ss_pred cceEEcCCceEEEEecCCCc-EEEEe-----CCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKG-VVVTC-----ADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~-v~v~~-----~~g~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. ++++ +.++. .+++++.+|.||+++.
T Consensus 234 Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 234 GFKFKLNTKVTGATK-KSDGKIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp TCEEECSEEEEEEEE-CTTSCEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred CCEEEeCceEEEEEE-cCCceEEEEEEecCCCCceEEEcCEEEECcC
Confidence 458999999999998 5555 77763 4667899999999985
No 111
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.14 E-value=0.16 Score=40.56 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=38.5
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEec-CCCcE-EEEeCCCcEEEcCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE-DPKGV-VVTCADGTQYSADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~-~~~~v-~v~~~~g~~~~ad~VI~t~P 104 (147)
.+.+.+.+.+... |.+++++++|++|... .++++ .|.+.+|+++.||.||+++.
T Consensus 192 ~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 192 PVSAFYEHLHREA-----GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp HHHHHHHHHHHHH-----TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHhC-----CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 3444444444332 4589999999999851 23445 67888998999999999985
No 112
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.11 E-value=0.14 Score=42.60 Aligned_cols=54 Identities=15% Similarity=0.007 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEec
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITV 103 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~ 103 (147)
-..+.+.+.+.+... |..+++++.|+++.. .++++.|.+.++.++.+|.|++|+
T Consensus 262 D~ei~~~l~~~l~~~-----gi~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~D~vLvAv 315 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQ-----GVMFKNGILPKKLTK-MDDKILVEFSDKTSELYDTVLYAI 315 (542)
T ss_dssp CHHHHHHHHHHHHHT-----TCEEEETCCEEEEEE-ETTEEEEEETTSCEEEESEEEECS
T ss_pred chhHHHHHHHHHHhh-----cceeecceEEEEEEe-cCCeEEEEEcCCCeEEEEEEEEcc
Confidence 344556666666544 469999999999998 778899999999899999999998
No 113
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.96 E-value=0.13 Score=41.24 Aligned_cols=40 Identities=25% Similarity=0.375 Sum_probs=32.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC-CC--cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA-DG--TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~-~g--~~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. +++++.+++. +| +++.+|.||+++.
T Consensus 226 gv~i~~~~~v~~i~~-~~~~~~v~~~~~g~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 226 GVTILTATKVESIAD-GGSQVTVTVTKDGVAQELKAEKVLQAIG 268 (464)
T ss_dssp TCEEECSCEEEEEEE-CSSCEEEEEESSSCEEEEEESEEEECSC
T ss_pred CCEEEeCcEEEEEEE-cCCeEEEEEEcCCceEEEEcCEEEECCC
Confidence 358999999999997 6666777764 56 6799999999984
No 114
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=92.95 E-value=0.15 Score=42.50 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=39.1
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-Cc---EEEEeCCCc--EEEcCEEEEecC
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KG---VVVTCADGT--QYSADRILITVS 104 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~---v~v~~~~g~--~~~ad~VI~t~P 104 (147)
..+.+.|.+.+... |.+|+++++|++|.. ++ ++ |.+...+|+ ++.||.||+|+-
T Consensus 255 ~~l~~~L~~~~~~~-----gv~i~~~t~v~~l~~-~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtG 314 (572)
T 1d4d_A 255 AHVAQVLWDNAVKR-----GTDIRLNSRVVRILE-DASGKVTGVLVKGEYTGYYVIKADAVVIAAG 314 (572)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSEEEEEEEE-C--CCEEEEEEEETTTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHc-----CCeEEecCEEEEEEE-CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCC
Confidence 46777777776543 469999999999987 54 54 344444674 689999999985
No 115
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.86 E-value=0.17 Score=40.70 Aligned_cols=53 Identities=11% Similarity=0.208 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. +++.+.|.+.+ .++.+|.||+|+..
T Consensus 217 ~~~~~l~~~l~~~-----Gv~i~~~~~v~~i~~-~~~~~~v~~~~-~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 217 AIGEAVTAAFRAE-----GIEVLEHTQASQVAH-MDGEFVLTTTH-GELRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHHHHHHT-----TCEEETTCCEEEEEE-ETTEEEEEETT-EEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhC-----CCEEEcCCEEEEEEE-eCCEEEEEECC-cEEEcCEEEECCCC
Confidence 4555555555433 469999999999987 55667777764 58999999999854
No 116
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.83 E-value=0.15 Score=42.24 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=34.4
Q ss_pred eEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDP-KGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~-~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.|+++++|++++++.+ +.++|++.+|++++||+||+|+-.
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 7999999999998332 468999999999999999999974
No 117
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.82 E-value=0.19 Score=39.75 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=32.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|++|+. .+. +|++.+|+++.+|++|+|+-.
T Consensus 77 i~~~~~~~V~~id~-~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 77 IKVITSEFATSIDP-NNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp CEEECSCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEecCC
Confidence 48999999999997 544 567788999999999999964
No 118
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.80 E-value=0.13 Score=41.25 Aligned_cols=57 Identities=5% Similarity=-0.041 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEe--C-CCc--EEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTC--A-DGT--QYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~--~-~g~--~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+|+++++|++|.. +++++. |++ . +|+ +++||.||.|.-...
T Consensus 100 ~~l~~~L~~~a~~~-----gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 100 PLYNQRVLKEAQDR-----GVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHc-----CCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 34556665555322 358999999999998 666653 443 3 675 799999999986543
No 119
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=92.68 E-value=0.13 Score=42.04 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEeC-CCc--EEEcC-EEEEecCh
Q psy13542 42 GGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTCA-DGT--QYSAD-RILITVSL 105 (147)
Q Consensus 42 gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~~-~g~--~~~ad-~VI~t~P~ 105 (147)
+|...+.+.|.+.+... |.+|+++++|++|..+++++|. |... +|+ ++.|| .||+|+--
T Consensus 199 ~g~~~l~~~L~~~~~~~-----Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKL-----GVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp CTTHHHHHHHHHHHHHT-----TCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHc-----CCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 34447788887776543 4699999999999983245442 3332 342 58995 99998853
No 120
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.57 E-value=0.15 Score=41.59 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe---CCCc--EEEcCEEEEecChhH
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC---ADGT--QYSADRILITVSLGV 107 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~---~~g~--~~~ad~VI~t~P~~~ 107 (147)
-..+...|++.+... |.+++.+++|++|.. +++.+.|++ .+|+ +++||.||.|+-+..
T Consensus 148 ~~~l~~~l~~~a~~~-----Gv~i~~~~~V~~l~~-~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRK-----GGEVLTRTRATSARR-ENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHT-----TCEEECSEEEEEEEE-ETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHc-----CCEEEcCcEEEEEEE-eCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 356777777766543 469999999999998 555566666 3575 789999999997654
No 121
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.53 E-value=0.13 Score=38.95 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=39.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.+.+.+... |.++++++ |..|.. .++.++|++ +|+++.+|+||+|+-..
T Consensus 70 ~~~~~~l~~~~~~~-----gv~~~~~~-v~~i~~-~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 70 VELTDKFRKQSERF-----GTTIFTET-VTKVDF-SSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECCC-CCEEEC-SSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHC-----CCEEEEeE-EEEEEE-cCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 35555555544322 34889887 999998 677788888 77889999999998653
No 122
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=92.44 E-value=0.15 Score=41.56 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=40.5
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc---EEEEeCCCc--EEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG---VVVTCADGT--QYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~---v~v~~~~g~--~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|.. .+++ +++.+.+|+ +++||.||.|.-..
T Consensus 111 ~~l~~~L~~~a~~~-----Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 111 ARFDDMLLRNSERK-----GVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhC-----CCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 34555565555322 458999999999998 6664 455566784 79999999998664
No 123
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.43 E-value=0.16 Score=41.13 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=31.8
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCc-----EEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGT-----QYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~-----~~~ad~VI~t~P~ 105 (147)
|.+++++++|.+|....++.+.|++.+++ ++.+|.||+++..
T Consensus 241 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 45899999999998733445777765543 7899999999843
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.43 E-value=0.1 Score=41.86 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=32.5
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC---CCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA---DGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~---~g~~~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. +++++.+++. +++++.+|.||+++..
T Consensus 225 gv~i~~~~~v~~i~~-~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 225 GVEVVTNALAKGAEE-REDGVTVTYEANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp TCEEEESEEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEE-eCCeEEEEEEeCCceeEEEcCEEEECcCC
Confidence 458999999999987 5556777654 4567999999999854
No 125
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=92.40 E-value=0.18 Score=36.72 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=38.3
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.|.+.+... + |.+++ +++|++|.. +++++ .|.+.+|+++.||.||.|+-.
T Consensus 69 ~~~~~l~~~~~~~---~-gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 69 AFHARAKYLLEGL---R-PLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp HHHHHHHHHHHTC---T-TEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred HHHHHHHHHHHcC---C-CcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCC
Confidence 4445555555321 0 24677 679999988 55664 577888888999999999876
No 126
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.27 E-value=0.17 Score=40.33 Aligned_cols=41 Identities=10% Similarity=0.203 Sum_probs=33.5
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC---CCcE--EEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA---DGTQ--YSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~---~g~~--~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. .++++.|++. +|+. +.+|.||+|+-.
T Consensus 330 ~v~i~~~~~v~~v~~-~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 330 RHAFRCMTTVERATA-TAQGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CSEEETTEEEEEEEE-ETTEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CeEEEeCCEEEEEEe-cCCEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 358999999999998 6677877765 6754 899999999843
No 127
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.13 E-value=0.15 Score=40.91 Aligned_cols=41 Identities=29% Similarity=0.396 Sum_probs=32.2
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC---CC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA---DG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~---~g--~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. +++++.|++. +| +++.+|.||+++..
T Consensus 232 gv~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDT-SGDGVKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp SCCEECSEEEEEEEC-SSSSEEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred CCEEEeCCEEEEEEE-cCCeEEEEEEecCCCcceEEECCEEEECCCC
Confidence 458999999999987 5556766653 44 67999999999843
No 128
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.05 E-value=0.24 Score=41.51 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=41.9
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeC-CC--cEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCA-DG--TQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~-~g--~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+++.+++|++|..++++.+.|++. +| ++++||.||.|.-...
T Consensus 128 ~~l~~~L~~~a~~~-----Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSR-----GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHT-----TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 44555555555332 45899999999999733556778776 67 5799999999986543
No 129
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=92.05 E-value=0.32 Score=40.58 Aligned_cols=57 Identities=12% Similarity=0.182 Sum_probs=41.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE-EEeC------CC---------cEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV-VTCA------DG---------TQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~-v~~~------~g---------~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+|+++++|++|..++++.+. |++. +| .+++||.||.|.-..
T Consensus 144 ~~l~~~L~~~a~~~-----Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 144 GHLVSWMGEQAEAL-----GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHHT-----TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHHc-----CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 46677777666432 4589999999999983334554 7665 33 689999999998664
No 130
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.96 E-value=0.15 Score=40.19 Aligned_cols=51 Identities=16% Similarity=0.119 Sum_probs=36.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++++|++|.. + + |++.+|+++.||.||++++.
T Consensus 218 ~~~~~~~~~~l~~~-----gV~~~~~~~v~~i~~-~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQL-----GIKLVHNFKIKEIRE-H--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHH-----TCEEECSCCEEEECS-S--E--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHC-----CCEEEcCCceEEECC-C--e--EEECCCCEEeeeEEEECCCC
Confidence 34445555544432 358999999999975 2 3 66788999999999999854
No 131
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=91.92 E-value=0.29 Score=38.73 Aligned_cols=36 Identities=31% Similarity=0.434 Sum_probs=30.4
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
|.+++++++|++|. + + .|++.+|+++.||.||+++.
T Consensus 201 GV~i~~~~~v~~i~--~-~--~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 201 GVDLRFERSVTGSV--D-G--VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp TCEEEESCCEEEEE--T-T--EEEETTSCEEECSEEEECSC
T ss_pred CcEEEeCCEEEEEE--C-C--EEEECCCCEEEcCEEEECcC
Confidence 45899999999998 2 2 56778898999999999985
No 132
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.79 E-value=0.35 Score=39.70 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=42.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC--CCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED--PKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~--~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++.+++|+.|.... ++.+.|++.+|+++.+|+||+|+-.
T Consensus 267 ~~l~~~l~~~~~~~-----gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 267 QKLAGALKAHVSDY-----DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA 324 (521)
T ss_dssp HHHHHHHHHHHHTS-----CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC
Confidence 45666666655432 45899999999998621 2368899989989999999999865
No 133
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=91.68 E-value=0.41 Score=38.89 Aligned_cols=39 Identities=21% Similarity=0.059 Sum_probs=33.1
Q ss_pred eEEcCCceEEEEecCCCcEEEEeC--CC--cEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCA--DG--TQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~--~g--~~~~ad~VI~t~P~ 105 (147)
+++++++|++|.. .++++.+++. +| +++.+|.||+++..
T Consensus 230 ~i~~~~~v~~i~~-~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 230 YFDAKARVISTIE-KEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp EEETTCEEEEEEE-CSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred EEEECCEEEEEEE-cCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 8999999999998 7778888764 67 67999999999854
No 134
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.65 E-value=0.25 Score=40.94 Aligned_cols=52 Identities=12% Similarity=0.270 Sum_probs=37.7
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. .+++ |++.+|+++.||.||+|+..
T Consensus 229 ~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~~~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 229 EMAAYVHEHMKNH-----DVELVFEDGVDALEE-NGAV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHT-----TCEEECSCCEEEEEG-GGTE--EEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHc-----CCEEEECCeEEEEec-CCCE--EEECCCCEEEcCEEEEccCC
Confidence 3444444444332 458999999999987 4443 56678889999999999853
No 135
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.63 E-value=0.18 Score=40.84 Aligned_cols=41 Identities=27% Similarity=0.263 Sum_probs=32.5
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCAD---G--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~---g--~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. .++++.|+..+ | +++.+|.||+++..
T Consensus 253 gV~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 253 GIDFKLGAKVTGAVK-SGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp TCEEECSEEEEEEEE-ETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred CCEEEECCeEEEEEE-eCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 458999999999998 66677666542 5 57999999999853
No 136
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.55 E-value=0.36 Score=39.81 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=33.7
Q ss_pred ceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEecChhH
Q psy13542 65 KKLLLKKEVTKINWEDPKG--VVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~--v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
.+++++ +|++|.. .+++ +.|++.+|+++.||.||.|.-...
T Consensus 210 v~i~~~-~V~~i~~-~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 210 VRHVED-RVEHVQR-DANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CEEEEC-CEEEEEE-CTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred cEEEEC-eEeEEEE-cCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 489999 9999987 5444 678888898899999999987643
No 137
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.53 E-value=0.28 Score=36.88 Aligned_cols=54 Identities=13% Similarity=0.256 Sum_probs=40.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe---CCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC---ADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~---~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++++ |.+|.. .++.+.+++ .++.++.+|++|+|+-.
T Consensus 84 ~~~~~~~~~~~~~~-----gv~i~~~~-v~~i~~-~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 84 SELMDRMREQSTKF-----GTEIITET-VSKVDL-SSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECSC-EEEEEC-SSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEEeE-EEEEEE-cCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 45555555554322 34899998 999998 778898887 36778999999999865
No 138
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.49 E-value=0.26 Score=39.30 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=31.3
Q ss_pred eEEcCCceEEEEecC--CCc--EEEEeCCCc----EEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWED--PKG--VVVTCADGT----QYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~--~~~--v~v~~~~g~----~~~ad~VI~t~P~ 105 (147)
.++++++|++|+... ++. ++|++.+|+ ++.||+||+|+-.
T Consensus 143 ~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 143 QSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred eEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 799999999998721 322 477777765 8999999999864
No 139
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.44 E-value=0.3 Score=40.02 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=40.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG--VVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~--v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+++.+ +|++|.. .+++ +.|++.+|++++||.||.|.-...
T Consensus 165 ~~l~~~L~~~a~~~-----gv~~~~~-~v~~i~~-~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVER-----GVNRVVD-EVVDVRL-NNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEC-CEEEEEE-CTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHC-----CCEEEEe-eEeEEEE-cCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 45555565555322 3589999 8999988 4443 578888898899999999987643
No 140
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=90.92 E-value=0.44 Score=38.30 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=40.3
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-CcEEEEeC--CCc--EEEcCEEEEecCh
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-KGVVVTCA--DGT--QYSADRILITVSL 105 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-~~v~v~~~--~g~--~~~ad~VI~t~P~ 105 (147)
-..+.+.+.+.+. - +++++++|++|.. .+ +++.|++. +|+ ++.+|.||+++..
T Consensus 213 d~~~~~~l~~~l~-v-------~i~~~~~v~~i~~-~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 213 DQDIVNTLLSILK-L-------NIKFNSPVTEVKK-IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp CHHHHHHHHHHHC-C-------CEECSCCEEEEEE-EETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred CHHHHHHHHhcCE-E-------EEEECCEEEEEEE-cCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 3455666666554 2 7999999999988 55 77888877 676 7999999999853
No 141
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=90.85 E-value=0.44 Score=37.98 Aligned_cols=52 Identities=21% Similarity=0.337 Sum_probs=37.2
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. + +++ .|.+ +|+++.+|.||+++..
T Consensus 192 ~~~~~l~~~l~~~-----gv~i~~~~~v~~i~~-~-~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 192 EFTDVLTEEMEAN-----NITIATGETVERYEG-D-GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHTT-----TEEEEESCCEEEEEC-S-SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHhC-----CCEEEcCCEEEEEEc-c-CcEEEEEE-CCCEEECCEEEECcCC
Confidence 4455555555443 569999999999987 4 343 4555 4568999999999853
No 142
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=90.80 E-value=0.49 Score=38.35 Aligned_cols=51 Identities=20% Similarity=0.384 Sum_probs=36.4
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P 104 (147)
.+.+.+.+.+... |.++++++.|++|.. + +++ .|.+ +|+++.||.||+++.
T Consensus 237 ~~~~~l~~~l~~~-----GV~i~~~~~v~~i~~-~-~~v~~v~~-~g~~i~~D~Vi~a~G 288 (490)
T 2bc0_A 237 DLTDLMAKNMEEH-----GIQLAFGETVKEVAG-N-GKVEKIIT-DKNEYDVDMVILAVG 288 (490)
T ss_dssp HHHHHHHHHHHTT-----TCEEEETCCEEEEEC-S-SSCCEEEE-SSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHhC-----CeEEEeCCEEEEEEc-C-CcEEEEEE-CCcEEECCEEEECCC
Confidence 3445555555433 469999999999986 4 333 3555 677899999999985
No 143
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.75 E-value=0.4 Score=39.03 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=40.5
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 40 KKGGYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 40 ~~gG~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
+.+|.-.+-+.+.+ . |.++++++.|++|.. +++...|.+.+|+++.||.||+++..
T Consensus 256 iGgG~~gle~~l~~-~--------GV~v~~~~~v~~i~~-~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 256 TGSKADEVIQELER-W--------GIDYVHIPNVKRVEG-NEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp ESTTHHHHHHHHHH-H--------TCEEEECSSEEEEEC-SSSCCEEEETTCCEEECSEEEECCCE
T ss_pred ECCCHHHHHHHHHh-C--------CcEEEeCCeeEEEec-CCceEEEEeCCCeEEEeCEEEECCCc
Confidence 45666555544432 2 348999999999986 54444567888989999999999853
No 144
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.57 E-value=0.3 Score=36.71 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=30.6
Q ss_pred cceEEcCCceEEEEecCCCcEE-EEeCC-----CcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVV-VTCAD-----GTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~-v~~~~-----g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|.+|.. +++++. |++.+ ++++.+|.||+++..
T Consensus 223 gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 223 KIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp TEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 358999999999998 555432 54433 357899999999854
No 145
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=90.46 E-value=0.18 Score=41.94 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeC---CC--cEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCA---DG--TQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~---~g--~~~~ad~VI~t~P~~~ 107 (147)
..+..+|++.+... |.+|+.+++|++|.. +++++ .|++. +| .+++||.||.|+-+..
T Consensus 170 ~~l~~~L~~~a~~~-----G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVAR-----GAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHc-----CCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 66777777766443 569999999999998 66653 35543 24 4789999999997754
No 146
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=90.41 E-value=0.39 Score=38.65 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=32.0
Q ss_pred cceEEcCCceEEEEecCCCc--EEEEeCC---C----cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKG--VVVTCAD---G----TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~--v~v~~~~---g----~~~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. .+++ +.|.+.+ | +++.+|.||+++..
T Consensus 242 gv~i~~~~~v~~i~~-~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKK-TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp TCEEETTEEEEEEEE-CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEE-cCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 458999999999987 5444 6677664 2 57899999999853
No 147
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=90.32 E-value=0.81 Score=34.26 Aligned_cols=40 Identities=23% Similarity=0.313 Sum_probs=30.9
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
...++..+..+....++.++|.+.+|+++.+|++|+|+-.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 76 VHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp EEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred EEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 4455566777766355668899999999999999999964
No 148
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.25 E-value=0.43 Score=38.98 Aligned_cols=52 Identities=10% Similarity=0.149 Sum_probs=37.5
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC-------CcEEEEeCCC-----cEEEcCEEEEecC
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP-------KGVVVTCADG-----TQYSADRILITVS 104 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~-------~~v~v~~~~g-----~~~~ad~VI~t~P 104 (147)
..-.+..++++.. .|++++.|++|.+... +.++|++.++ +++.|++||+++.
T Consensus 148 ~~Yl~~~A~~~~~--------~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 148 EDYMRWCAQQFSD--------VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp HHHHHHHHHTTGG--------GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHcCC--------ceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 3444555666642 7999999999987332 2478887544 3689999999998
No 149
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.25 E-value=0.42 Score=36.52 Aligned_cols=39 Identities=8% Similarity=0.204 Sum_probs=31.9
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEE-cCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYS-ADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~-ad~VI~t~P 104 (147)
.++++++.|.+|.. .++.+.|++.+|+++. +|.||+++.
T Consensus 230 v~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~d~vi~a~G 269 (369)
T 3d1c_A 230 IEMNVHYTVKDIDF-NNGQYHISFDSGQSVHTPHEPILATG 269 (369)
T ss_dssp EEEECSCCEEEEEE-ETTEEEEEESSSCCEEESSCCEECCC
T ss_pred EEEecCcEEEEEEe-cCCceEEEecCCeEeccCCceEEeec
Confidence 58999999999986 5567788888887665 599999884
No 150
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.07 E-value=0.2 Score=40.48 Aligned_cols=39 Identities=13% Similarity=0.196 Sum_probs=30.9
Q ss_pred eEEcCCceEEEEecCCC--cEEEEeCC---C--cEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPK--GVVVTCAD---G--TQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~--~v~v~~~~---g--~~~~ad~VI~t~P~ 105 (147)
.|++++.|++|.. .++ +++|++.+ | .++.||+||+|+-.
T Consensus 119 ~i~~~~~V~~v~~-~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 119 YIRFNTAVRHVEF-NEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp GEECSEEEEEEEE-ETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred eEEeCCEEEEEEE-cCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 3999999999998 444 67777654 4 57899999999974
No 151
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=90.02 E-value=0.45 Score=35.57 Aligned_cols=53 Identities=9% Similarity=0.302 Sum_probs=37.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++++ |+.|.. .++.+.| +.+|+++.+|++|+|+-.
T Consensus 62 ~~~~~~~~~~~~~~-----~~~~~~~~-v~~i~~-~~~~~~v-~~~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 62 PLLMERMHEHATKF-----ETEIIFDH-INKVDL-QNRPFRL-NGDNGEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECCC-EEEEEC-SSSSEEE-EESSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHC-----CCEEEEee-eeEEEe-cCCEEEE-EeCCCEEEcCEEEECCCC
Confidence 34555554444321 24788886 999988 7777887 667789999999999864
No 152
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=89.87 E-value=0.44 Score=37.41 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=32.1
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEecChh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCAD---G--TQYSADRILITVSLG 106 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~---g--~~~~ad~VI~t~P~~ 106 (147)
+|+++++|++|.. +++++|++.+ | ++++||.||.|.-..
T Consensus 125 ~v~~~~~v~~i~~--~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~ 168 (410)
T 3c96_A 125 AVRTGLGVERIEE--RDGRVLIGARDGHGKPQALGADVLVGADGIH 168 (410)
T ss_dssp SEEESEEEEEEEE--ETTEEEEEEEETTSCEEEEEESEEEECCCTT
T ss_pred EEEECCEEEEEec--CCccEEEEecCCCCCceEEecCEEEECCCcc
Confidence 6999999999987 4568887654 7 579999999998664
No 153
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=89.73 E-value=0.75 Score=34.62 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=37.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeC---CC--cEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCA---DG--TQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~---~g--~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++++.|.+|.. +++...|++. +| +++.+|.||+++..
T Consensus 191 ~~~~~~l~~~l~~~-----gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 191 EASVKELMKAHEEG-----RLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHHHHHHHTT-----SSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHHhccccC-----CeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 44556666655433 458999999999987 5442234443 66 57899999999853
No 154
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=89.64 E-value=0.36 Score=39.82 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=41.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD---G--TQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~---g--~~~~ad~VI~t~P~~ 106 (147)
..+-+.|.+.+.. .|+++++|++|.. ++++|+|++.+ | ++++||+||.|.-..
T Consensus 138 ~~l~~~L~~~a~~--------~v~~~~~v~~~~~-~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 138 HWLAPLLAEAVGE--------RLRTRSRLDSFEQ-RDDHVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHHHGG--------GEECSEEEEEEEE-CSSCEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHH--------hcccCcEEEEEEE-eCCEEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 3566677777753 2999999999998 77788887654 6 479999999997654
No 155
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=89.54 E-value=0.67 Score=39.47 Aligned_cols=56 Identities=18% Similarity=0.157 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+.... |.+| +++.|+.|.. +++++ .|.+.+|+++.||.||+|+-..
T Consensus 123 ~~~~~~L~~~Le~~~----GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 123 KRYREYMKKVCENQE----NLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHHTCT----TEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHhCC----CCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 345555655554210 2467 6789999988 66665 5888899899999999999753
No 156
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=89.53 E-value=0.36 Score=38.84 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=30.8
Q ss_pred cceEEcCCceEEEEec-CCCcEEEEeC-----CCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWE-DPKGVVVTCA-----DGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~-~~~~v~v~~~-----~g~~~~ad~VI~t~P 104 (147)
|.+++++++|++|... +++.+.|++. +++++.+|.||+++.
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 284 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVG 284 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCC
Confidence 4589999999999862 2344666654 456799999999984
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=89.34 E-value=0.59 Score=38.19 Aligned_cols=54 Identities=11% Similarity=0.092 Sum_probs=38.2
Q ss_pred HHHHHHHhhCCC-CCCCCCcceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEecChh
Q psy13542 46 NVFKLLMKQMPG-QTPIDLSKKLLLKKEVTKINWEDPKG--VVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 46 ~l~~~l~~~l~~-~~~~~~g~~i~l~~~V~~I~~~~~~~--v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+.+.|.+.+.. . |.+++.+ .|++|.. ++++ +.|++.+|.+++||.||.|.-..
T Consensus 176 ~l~~~L~~~a~~~~-----Gv~i~~~-~v~~i~~-~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 176 KFSQLLTEHCTQKL-----GVTHIRD-HVSQIIN-NQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHTS-----CCEEEEC-CEEEEEE-CTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHhcC-----CCEEEEe-EEEEEEe-cCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 445555544432 2 3589999 5999988 5443 46778887789999999998764
No 158
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.23 E-value=0.57 Score=34.81 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=30.2
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCC---Cc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCAD---GT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~---g~--~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. +++...|++.+ |+ ++.+|.||+++.
T Consensus 204 gv~~~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKG-DKVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp TEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEeCCEEEEEec-cCceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 458999999999987 54433455543 75 789999999874
No 159
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=88.92 E-value=0.52 Score=35.47 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=37.5
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC--CCc-EEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED--PKG-VVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~--~~~-v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++. ..|.+|.. . ++. +.|.+.+|+++.+|+||+|+-.
T Consensus 65 ~~~~~~l~~~~~~~-----gv~~~~-~~v~~i~~-~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 65 MELAQRMHQQAEKF-----GAKVEM-DEVQGVQH-DATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEE-CCEEEEEE-CTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEe-eeEEEEEe-ccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 34555554444321 236777 68999988 5 443 7777778889999999999865
No 160
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.78 E-value=0.83 Score=34.24 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=38.4
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++ .+|+.|.. .++.+.|.+ ++.++.+|++|+|+-.
T Consensus 72 ~~~~~~~~~~~~~~-----~v~~~~-~~v~~i~~-~~~~~~v~~-~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 72 SELAKLFADHAANY-----AKIREG-VEVRSIKK-TQGGFDIET-NDDTYHAKYVIITTGT 124 (319)
T ss_dssp HHHHHHHHHHHHTT-----SEEEET-CCEEEEEE-ETTEEEEEE-SSSEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEE-eeEEEEEE-eCCEEEEEE-CCCEEEeCEEEECCCC
Confidence 45566665555432 347777 78999988 666777877 5668999999999864
No 161
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=88.70 E-value=0.24 Score=40.45 Aligned_cols=58 Identities=12% Similarity=0.038 Sum_probs=40.1
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEec--CCCcEEEEe--C-CC--cEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE--DPKGVVVTC--A-DG--TQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~--~~~~v~v~~--~-~g--~~~~ad~VI~t~P~~~ 107 (147)
..+.+.|.+.+... |.+|+++++|++|..+ +++.+.|++ . +| ++++||.||.|+-...
T Consensus 166 ~~l~~~L~~~~~~~-----gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLL-----GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 45555665555322 3589999999999872 134567766 4 66 5799999999986543
No 162
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=88.42 E-value=0.69 Score=39.49 Aligned_cols=54 Identities=11% Similarity=0.133 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCC-CCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecChh
Q psy13542 46 NVFKLLMKQMPG-QTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 46 ~l~~~l~~~l~~-~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+.+.|.+.+.. . |.++ +++.|+.|.. +++++ .|.+.+|.++.||.||+|+-..
T Consensus 125 ~~~~~L~e~Le~~~-----GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQP-----NLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCT-----TEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCC-----CCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 455555555532 1 3477 6789999987 66665 6888889889999999999764
No 163
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.40 E-value=0.58 Score=37.81 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=36.7
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCC---Cc--EEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCAD---GT--QYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~---g~--~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.++++++.|++|....++.+.|++.+ |+ ++.+|.||+++..
T Consensus 226 ~~~~~l~~~l~~~-----gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 226 QMSSLVTEHMESH-----GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHT-----TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHC-----CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 3444455544433 458999999999987334456666543 54 4789999999853
No 164
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=88.29 E-value=0.6 Score=35.39 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=37.3
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEE-EeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVV-TCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v-~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.++++++ |.+|.. ++.++| .+.+|+++.+|++|+|+-.
T Consensus 71 ~~~~~~l~~~~~~~-----~v~~~~~~-v~~i~~--~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 71 PELMDEMREQALRF-----GADLRMED-VESVSL--HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp HHHHHHHHHHHHHT-----TCEEECCC-EEEEEC--SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CCEEEEee-EEEEEe--CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 44555554444321 24789887 999986 345677 7788889999999999865
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=88.05 E-value=0.84 Score=36.84 Aligned_cols=52 Identities=19% Similarity=0.344 Sum_probs=35.5
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.+++++++|++|.. + +++ .+.+. +.++.||.||+|+..
T Consensus 228 ~~~~~l~~~l~~~-----Gv~i~~~~~v~~i~~-~-~~v~~v~~~-~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 228 DMAEYIYKEADKH-----HIEILTNENVKAFKG-N-ERVEAVETD-KGTYKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHHHHHHT-----TCEEECSCCEEEEEE-S-SBEEEEEET-TEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHc-----CcEEEcCCEEEEEEc-C-CcEEEEEEC-CCEEEcCEEEECcCC
Confidence 3444444444332 458999999999987 5 344 45554 448999999999853
No 166
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.66 E-value=0.49 Score=35.39 Aligned_cols=41 Identities=7% Similarity=0.046 Sum_probs=30.2
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCC-----CcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCAD-----GTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~-----g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|.+|.. +++...|++.+ ++++.+|.||++++.
T Consensus 203 gv~~~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 203 KVNVLTPFVPAELIG-EDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp SCEEETTEEEEEEEC-SSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred CeEEEeCceeeEEec-CCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 358999999999987 54444454433 357899999999853
No 167
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=87.56 E-value=0.7 Score=34.22 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=31.2
Q ss_pred cceEEcCCceEEEEecCCCc---EEEEeCCCc--EEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKG---VVVTCADGT--QYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~---v~v~~~~g~--~~~ad~VI~t~P~ 105 (147)
|.+++++++|.+|.. ++++ +.+...+|+ ++.+|.||+++..
T Consensus 197 gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 197 KIELITSASVDEVYG-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp TEEEECSCEEEEEEE-ETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred CeEEEeCcEEEEEEc-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 468999999999987 5433 444444775 7899999999854
No 168
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=87.54 E-value=0.88 Score=34.77 Aligned_cols=39 Identities=31% Similarity=0.385 Sum_probs=29.9
Q ss_pred ceEEcCCceEEEEecCCCc---EEEEeCCC--cEEEcCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWEDPKG---VVVTCADG--TQYSADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~---v~v~~~~g--~~~~ad~VI~t~P 104 (147)
.+++++++|++|.. ++++ +.+...+| +++.+|.||+++.
T Consensus 217 v~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 217 IDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp EEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCC
T ss_pred eEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCC
Confidence 58999999999987 5454 33433477 5789999999985
No 169
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=87.29 E-value=1 Score=35.76 Aligned_cols=38 Identities=32% Similarity=0.389 Sum_probs=31.3
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|+.|+. .+. .|++.+|+++.+|++|+|+-.
T Consensus 75 v~~~~~~~v~~i~~-~~~--~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 75 IQLLGGTQVTAINR-DRQ--QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp EEEECSCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEcCCC
Confidence 48999999999987 544 466678889999999999854
No 170
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=87.19 E-value=0.83 Score=34.19 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=37.0
Q ss_pred HHHHHHHHhhCCC-CCCCCCcceEEcCCceEEEEecCCCcE-EEEeC---------CC-----cEEEcCEEEEecC
Q psy13542 45 GNVFKLLMKQMPG-QTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCA---------DG-----TQYSADRILITVS 104 (147)
Q Consensus 45 ~~l~~~l~~~l~~-~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~---------~g-----~~~~ad~VI~t~P 104 (147)
..+.+.|.+.+.. . |.+++++++|++|.. +++++ .|.+. +| .++.||.||+|+-
T Consensus 119 ~~~~~~l~~~~~~~~-----gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG 188 (284)
T 1rp0_A 119 ALFTSTIMSKLLARP-----NVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCG 188 (284)
T ss_dssp HHHHHHHHHHHHTST-----TEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcC-----CCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCC
Confidence 4566666665532 2 468999999999987 55544 23321 32 5799999999986
No 171
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=86.94 E-value=1.2 Score=37.66 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=40.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE---EEEe-CCCc--EEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV---VVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v---~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
..+.+.|.+.+... |.+|+.+++|.++.. +++++ .+.. .+|+ .+.||.||+|+--
T Consensus 155 ~~l~~~L~~~~~~~-----gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRY-----DTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTS-----CCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhC-----CCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 46888888887643 469999999999987 55543 3333 4675 6899999999854
No 172
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=86.77 E-value=1 Score=33.44 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=30.2
Q ss_pred cceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGV-VVTCA---DGT--QYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v-~v~~~---~g~--~~~ad~VI~t~P~ 105 (147)
|.+++++++|.+|.. +++++ .|.+. +|+ ++.+|.||+++..
T Consensus 193 gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKG-DASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp TEEEETTEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CeEEEeCCEEEEEEC-CCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 458999999999987 54443 34433 665 6899999999853
No 173
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=86.73 E-value=0.43 Score=37.84 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=31.4
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeC--CCcEEEcCEEEEec---ChhHHhh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCA--DGTQYSADRILITV---SLGVLKS 110 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~--~g~~~~ad~VI~t~---P~~~l~~ 110 (147)
|.+++++++|++|+. ++++++.. +|+++.+|.||+++ |...+..
T Consensus 214 GV~i~~~~~v~~v~~---~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 214 NIDWIANVAVKAIEP---DKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp TCEEECSCEEEEECS---SEEEEECTTSCEEEEECSEEEEECEEECCHHHHT
T ss_pred CCEEEeCCEEEEEeC---CeEEEEecCCCceEEeeeEEEECCCCccchhHhh
Confidence 358999999999965 34555542 26789999999985 4444443
No 174
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=86.57 E-value=0.53 Score=39.15 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=39.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV-VVTCA---DGT--QYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v-~v~~~---~g~--~~~ad~VI~t~P~~~ 107 (147)
..+...+++.+... |.+|+.+++|++|.. +++++ .|+.. +|+ ++.||.||.|+-+..
T Consensus 188 ~~l~~~l~~~a~~~-----Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAED-----GAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHT-----TCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHc-----CCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 45666666655433 469999999999998 55553 34432 343 689999999997754
No 175
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=86.48 E-value=1.1 Score=36.15 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=32.9
Q ss_pred ceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
.++++++.|+.|+. +++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 108 v~~~~~~~v~~i~~-~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 108 IDAKVRHEVTKVDT-EKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CEEESSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEC-CCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 37999999999998 667788776 5576 7999999999864
No 176
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=86.33 E-value=1.3 Score=37.12 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=40.7
Q ss_pred HHHHHHHHhhCCCCCCCCCc-ceEEcCCceEEEEecCCCc---EEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLS-KKLLLKKEVTKINWEDPKG---VVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g-~~i~l~~~V~~I~~~~~~~---v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
..+.+.|.+.+... | .+|+.+++|++|.. ++++ +.+.. .+|+ ++.||.||+|+-.
T Consensus 134 ~~l~~~L~~~~~~~-----gnv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 134 FHMLHTLFQTSLQF-----PQIQRFDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHHHTTC-----TTEEEEETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhC-----CCcEEEeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 46778888877643 3 58999999999987 5554 33332 5776 6899999999865
No 177
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=86.06 E-value=0.92 Score=35.77 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=31.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|+.|+. .+. +|++.+|+++.+|++|+|+-.
T Consensus 73 ~v~~~~~~~v~~i~~-~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDP-QAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp SCEEEETCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEcCCEEEEEEC-CCC--EEEECCCCEEECCEEEECCCC
Confidence 458999999999987 433 466678889999999999854
No 178
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.94 E-value=0.57 Score=37.58 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=30.6
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. . ++.+++.+| +++.+|.||+|+..
T Consensus 226 gv~i~~~~~v~~i~~-~--~v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-G--CLLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp TCEEETTCEEEEEET-T--EEEEECSSSCCCEECCSCEEECCCE
T ss_pred CCEEEECCEEEEEEe-C--CEEEEECCCceEEEECCEEEECcCC
Confidence 358999999999985 2 376765456 68999999999853
No 179
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.91 E-value=1.7 Score=32.60 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=29.2
Q ss_pred cceEEcCCceEEEEecCCC--cEEEEe-CCCc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPK--GVVVTC-ADGT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~--~v~v~~-~~g~--~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. ++. ++.+.. .+|+ ++.+|.||+++.
T Consensus 202 gv~i~~~~~v~~i~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQG-ADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp TEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CceEecCCceEEEcc-CCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 458999999999987 433 233332 2664 789999999984
No 180
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.86 E-value=1.1 Score=35.26 Aligned_cols=38 Identities=32% Similarity=0.452 Sum_probs=31.6
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|+.|+. ... .|++.+|+++.+|++|+|+-.
T Consensus 72 i~~~~~~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 72 IDMLTGPEVTALDV-QTR--TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp CEEEESCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEccCC
Confidence 48999999999987 443 567788889999999999864
No 181
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=84.81 E-value=0.94 Score=36.62 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=31.3
Q ss_pred ceEEcCCceEEEEecCCCcEEEE-eCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVT-CADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~-~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|..|+. +++.+.+. ..+++++.+|++|+|+-.
T Consensus 107 v~v~~~~~v~~i~~-~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 107 AKVYMESPVQSIDY-DAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp CEEETTCCEEEEET-TTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEC-CCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 37899999999997 66777776 322457999999999864
No 182
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=84.81 E-value=1.2 Score=37.86 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=32.2
Q ss_pred ceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVV-VTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~-v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.++ ++..|+.|.. +++++. |.+.+|+++.||.||+|+-..
T Consensus 133 V~I-~~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 133 IDL-LQDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp EEE-EECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred CEE-EeeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 366 4669999987 666765 888899899999999998654
No 183
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=84.74 E-value=1.3 Score=37.06 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=39.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE---EEEe-CCCc--EEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV---VVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v---~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
..+.+.|.+.+... |.+|+++++|++|..+.++++ .+.. .+|+ ++.||.||+|+--
T Consensus 143 ~~l~~~L~~~~~~~-----gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-----HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhC-----CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 46677777666432 459999999999987224443 3332 5665 5899999999865
No 184
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=84.65 E-value=0.8 Score=37.47 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=35.2
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEE--EEeCCCc----EEEcCEEEEec
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVV--VTCADGT----QYSADRILITV 103 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~--v~~~~g~----~~~ad~VI~t~ 103 (147)
..+.+.+.+.+... |.++++|+.|++|+. +++. +...||+ ++.||.||.|+
T Consensus 272 ~~~~~~~~~~L~~~-----GV~v~~~~~v~~v~~---~~~~~~~~~~dg~~~~~~i~ad~viwa~ 328 (502)
T 4g6h_A 272 KKLSSYAQSHLENT-----SIKVHLRTAVAKVEE---KQLLAKTKHEDGKITEETIPYGTLIWAT 328 (502)
T ss_dssp HHHHHHHHHHHHHT-----TCEEETTEEEEEECS---SEEEEEEECTTSCEEEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHhc-----ceeeecCceEEEEeC---CceEEEEEecCcccceeeeccCEEEEcc
Confidence 44555555555443 569999999999965 3443 3445663 68999999887
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.59 E-value=1 Score=35.08 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=29.4
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|+.|+. .. ..|+ .+|+++.+|++|+|+-.
T Consensus 75 v~~~~g~~v~~id~-~~--~~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 75 IEIRLAEEAKLIDR-GR--KVVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp EEEECSCCEEEEET-TT--TEEE-ESSCEEECSEEEECCCE
T ss_pred cEEEECCEEEEEEC-CC--CEEE-ECCcEEECCEEEECCCC
Confidence 47899999999987 43 3455 57778999999999864
No 186
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=83.82 E-value=1.7 Score=32.18 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=29.5
Q ss_pred cceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGV-VVTCA---DGT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v-~v~~~---~g~--~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. +++++ .|.+. +|+ ++.+|.||+++.
T Consensus 194 gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 194 NVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp TEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 458999999999987 55544 34433 353 689999999974
No 187
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=83.80 E-value=0.88 Score=36.96 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=31.4
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
|.++++++.|++|+. .+. +|++.+|+++.+|++|+|+-
T Consensus 104 gv~~~~g~~v~~id~-~~~--~V~~~~g~~i~yd~lviATG 141 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDV-RDN--MVKLNDGSQITYEKCLIATG 141 (493)
T ss_dssp EEEEEETCCEEEEEG-GGT--EEEETTSCEEEEEEEEECCC
T ss_pred CeEEEcCCEEEEEEC-CCC--EEEECCCCEEECCEEEECCC
Confidence 458899999999987 443 56678898999999999985
No 188
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=83.67 E-value=1.4 Score=32.25 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=29.0
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++. ++|++|.. ++ .|.+.+|+++.+|.||+++..
T Consensus 189 v~i~~-~~v~~i~~-~~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 189 VRVET-TRIREIAG-HA---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp CEEEC-SCEEEEET-TE---EEEETTSCEEEESEEEECCEE
T ss_pred cEEEc-ceeeeeec-CC---eEEeCCCCEEEEEEEEEccCc
Confidence 47875 89999976 33 677889999999999999843
No 189
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=83.49 E-value=2.1 Score=33.98 Aligned_cols=38 Identities=21% Similarity=0.359 Sum_probs=29.4
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
++++++.|.+|.. .+ ++.....+|+++.+|.||+++..
T Consensus 205 ~i~~~~~v~~i~~-~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 205 NLRLQEITMKIEG-EE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp EEEESCCEEEEEC-SS-SCCEEEETTEEEECSEEEECSCE
T ss_pred EEEeCCeEEEEec-cC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 7999999999986 44 44333456778999999999843
No 190
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=83.01 E-value=1 Score=37.85 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=38.8
Q ss_pred HHHHHHHHhhCCCCCCCCCcc--eEEcCCceEEEEecCC----CcEEEEeC------CC--cEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSK--KLLLKKEVTKINWEDP----KGVVVTCA------DG--TQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~--~i~l~~~V~~I~~~~~----~~v~v~~~------~g--~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |. +|+++++|+++.. ++ .+|+|++. +| ++++||.||.|.-..
T Consensus 141 ~~l~~~L~~~a~~~-----g~~v~v~~~~~v~~l~~-~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 141 ARVHDHYLERMRNS-----PSRLEPHYARRVLDVKV-DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp HHHHHHHHHHHHHS-----TTCCCCBCSEEEEEEEE-CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhC-----CCCcEEecCCEEEEEEE-CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcc
Confidence 34555555555432 22 7999999999998 44 25777654 46 579999999998654
No 191
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.92 E-value=1.9 Score=32.17 Aligned_cols=40 Identities=25% Similarity=0.283 Sum_probs=29.3
Q ss_pred cceEEcCCceEEEEecCCCc---EEEEe-CCCc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKG---VVVTC-ADGT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~---v~v~~-~~g~--~~~ad~VI~t~P 104 (147)
|.+++++++|++|.. ++++ +.+.. .+|+ ++.+|.||+++.
T Consensus 204 gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 204 NIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp TCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred CcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 358999999999987 5442 33332 2664 689999999984
No 192
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=82.55 E-value=1.4 Score=37.45 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=38.7
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCc---EEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKG---VVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~---v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
..+.+.|.+.+... |.+|+.+++|.+|.. ++++ +.+.. .+|+ .+.||.||+|+--
T Consensus 158 ~~l~~~L~~~a~~~-----gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 158 HTMLFAVANECLKL-----GVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHH-----TCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhC-----CCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 35777777766432 358999999999987 4453 33332 5675 4899999999854
No 193
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=82.24 E-value=1.4 Score=35.20 Aligned_cols=40 Identities=23% Similarity=0.378 Sum_probs=32.1
Q ss_pred ceEEcCCceEEEEecCCCcEEEE-eCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVT-CADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~-~~~g~~~~ad~VI~t~P~ 105 (147)
.+++++++|++|+. .++.+.++ ..+++++.+|++|+|+-.
T Consensus 73 i~~~~~~~V~~id~-~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 73 IQLLLNREVVAMDV-ENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp EEEECSCEEEEEET-TTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CEEEECCEEEEEEC-CCCEEEEEecCceEEEEcCEEEECCCc
Confidence 47889999999998 77777775 235568999999999854
No 194
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=82.11 E-value=1.7 Score=35.54 Aligned_cols=39 Identities=33% Similarity=0.389 Sum_probs=31.6
Q ss_pred eEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
+++++++|++|+. .++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 74 ~~~~~~~V~~id~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 74 EVRVKHEVVAIDR-AAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp EEETTEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EEEECCEEEEEEC-CCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 7899999999998 777777765 3343 7899999999854
No 195
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=81.86 E-value=2.2 Score=33.84 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=31.6
Q ss_pred ceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
.++++++.|..|.. .++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 71 v~~~~~~~v~~i~~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 71 VNVFSNTEITAIQP-KEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp CEEEETEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CEEEECCEEEEEeC-CCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 37889999999988 667777765 4565 4899999999853
No 196
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=81.81 E-value=2.6 Score=31.55 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=29.9
Q ss_pred cceEEcCCceEEEEecCCC--c---EEEEeC-CC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPK--G---VVVTCA-DG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~--~---v~v~~~-~g--~~~~ad~VI~t~P~ 105 (147)
|.++++++.|.+|.. +++ + +.+... +| +++.+|.||+++..
T Consensus 209 gv~i~~~~~v~~i~~-~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 209 KIDVIWNSSVVEAYG-DGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp TEEEECSEEEEEEEE-SSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CeeEecCCceEEEeC-CCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 458999999999987 543 3 444331 45 57899999999853
No 197
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=81.78 E-value=1.8 Score=34.39 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=29.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
.+++.+ .|++|+. ++. +|++++|+++.+|++|+|+-..
T Consensus 71 v~~i~~-~v~~Id~-~~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 71 IEFINE-KAESIDP-DAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEET-TTT--EEEETTCCEEECSEEEECCCCE
T ss_pred cEEEEe-EEEEEEC-CCC--EEEECCCCEEECCEEEEeCCCC
Confidence 355554 7999987 443 4678899999999999999753
No 198
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=81.74 E-value=3.7 Score=33.80 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=32.3
Q ss_pred eEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
++++++.|++|+. .++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 109 ~v~~~~~V~~id~-~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 109 DIRVLSEVVKINK-EEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp EEECSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EEEECCEEEEEEC-CCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 7999999999998 777787775 4565 6899999999854
No 199
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=80.86 E-value=4.2 Score=32.15 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=29.8
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P 104 (147)
.++++++.|++|+. +++.+...+| +++.||.+|++++
T Consensus 215 V~~~~~~~v~~v~~---~~~~~~~~~g~~~~i~~d~vi~~~G 253 (430)
T 3hyw_A 215 IDWIANVAVKAIEP---DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp CEEECSCEEEEECS---SEEEEECTTSCEEEEECSEEEEECE
T ss_pred eEEEeCceEEEEeC---CceEEEeeCCCceEeecceEEEecc
Confidence 58999999999964 5677776555 5789999999975
No 200
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=80.40 E-value=2.7 Score=33.63 Aligned_cols=40 Identities=13% Similarity=0.263 Sum_probs=32.3
Q ss_pred ceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
.+++++++|++|+. .++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 81 i~~~~~~~V~~id~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 81 VEALVETRAHAIDR-AAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp CEEECSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cEEEECCEEEEEEC-CCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 47889999999998 777777775 3454 7899999999854
No 201
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.38 E-value=1.7 Score=33.77 Aligned_cols=48 Identities=15% Similarity=0.258 Sum_probs=33.9
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
.+.+.+.+.+... |.+++++++|++|.. ++ |++.+|+ +.+|.||+++.
T Consensus 184 ~~~~~l~~~l~~~-----gV~i~~~~~v~~i~~---~~--v~~~~g~-i~~D~vi~a~G 231 (367)
T 1xhc_A 184 ELSNMIKDMLEET-----GVKFFLNSELLEANE---EG--VLTNSGF-IEGKVKICAIG 231 (367)
T ss_dssp HHHHHHHHHHHHT-----TEEEECSCCEEEECS---SE--EEETTEE-EECSCEEEECC
T ss_pred HHHHHHHHHHHHC-----CCEEEcCCEEEEEEe---eE--EEECCCE-EEcCEEEECcC
Confidence 3444444444433 468999999999973 23 5667887 99999999874
No 202
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=80.33 E-value=1.7 Score=34.10 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=30.9
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
.+++++++|+.|+. .+. .|++.+|+++.+|++|+|+-
T Consensus 80 i~~~~~~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG 116 (415)
T 3lxd_A 80 VEMKLGAEVVSLDP-AAH--TVKLGDGSAIEYGKLIWATG 116 (415)
T ss_dssp EEEEETCCEEEEET-TTT--EEEETTSCEEEEEEEEECCC
T ss_pred cEEEeCCEEEEEEC-CCC--EEEECCCCEEEeeEEEEccC
Confidence 48999999999987 433 56778888999999999985
No 203
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=79.64 E-value=2.4 Score=33.61 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=30.6
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC-cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG-TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g-~~~~ad~VI~t~P~ 105 (147)
.+++++++|+.|+. +...|.+.+| .++.+|++|+|+-.
T Consensus 74 i~v~~~~~v~~i~~---~~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 74 IDLHLNAEVIEVDT---GYVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp CEEETTCEEEEECS---SEEEEECSSSEEEEECSEEEECCCE
T ss_pred cEEEecCEEEEEec---CCCEEEECCceEEEEcCEEEECCCC
Confidence 48999999999976 3466777777 47999999999853
No 204
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=79.45 E-value=1.4 Score=35.22 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=29.7
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P 104 (147)
|.++++++.|++++. + .|++.+|+++.+|.||+++.
T Consensus 202 gV~i~~~~~v~~~~~---~--~v~~~~g~~~~~D~vl~a~G 237 (437)
T 4eqs_A 202 EIPYRLNEEINAING---N--EITFKSGKVEHYDMIIEGVG 237 (437)
T ss_dssp TCCEEESCCEEEEET---T--EEEETTSCEEECSEEEECCC
T ss_pred ceEEEeccEEEEecC---C--eeeecCCeEEeeeeEEEEec
Confidence 358999999999865 2 36678999999999999974
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=79.19 E-value=1.5 Score=34.83 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=28.4
Q ss_pred cceEEcCCceEEEEecCCCcEEEEe--CC-----CcEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTC--AD-----GTQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~--~~-----g~~~~ad~VI~t~P 104 (147)
|.++++++.|++|.. +++.+.. .+ ++++.+|.++++++
T Consensus 222 gI~~~~~~~v~~v~~---~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 222 GIEAYTNCKVTKVED---NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp TCEEECSEEEEEEET---TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred CCEEEcCCEEEEEEC---CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 358999999999975 3555553 33 56789999999864
No 206
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=78.80 E-value=1.5 Score=37.26 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=29.7
Q ss_pred cceEEcCCceEEEEecCCCcEEEEe---CCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTC---ADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~---~~g~~~~ad~VI~t~P~ 105 (147)
|.+++++++|++|.. + ++.++. .+++++.||.||+|+..
T Consensus 581 GV~i~~~~~V~~i~~-~--~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 581 GVARVTDHAVVAVGA-G--GVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp TCEEEESEEEEEEET-T--EEEEEETTTCCEEEEECSEEEEESCE
T ss_pred CCEEEcCcEEEEEEC-C--eEEEEEccCCeEEEEECCEEEECCCC
Confidence 358999999999976 3 455543 35568999999999854
No 207
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=77.96 E-value=4.9 Score=29.48 Aligned_cols=52 Identities=10% Similarity=-0.007 Sum_probs=37.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC--CcEEEE-eCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP--KGVVVT-CADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~--~~v~v~-~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... |.+++++ +|.+| . ++ +.+.++ ..++ ++.+|++|+|+-.
T Consensus 62 ~~~~~~~~~~~~~~-----~v~~~~~-~v~~i-~-~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRF-----GLKHEMV-GVEQI-L-KNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTT-----CCEEECC-CEEEE-E-ECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHc-----CcEEEEE-EEEEE-e-cCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 56677776666543 3488888 89999 6 55 678752 2344 8999999999865
No 208
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=77.72 E-value=0.89 Score=36.80 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=35.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcE---EEEeCCCcEEEcCEEEEecChh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGV---VVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v---~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
..+.+.|.+.+... |.+++.+++| +|.. +++++ .+.+.+| ++.||.||+|+-..
T Consensus 119 ~~l~~~L~~~~~~~-----gv~i~~~~~v-~l~~-~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREE-----GIPIIEDRLV-EIRV-KDGKVTGFVTEKRGL-VEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHT-----TCCEECCCEE-EEEE-ETTEEEEEEETTTEE-ECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhC-----CCEEEECcEE-EEEE-eCCEEEEEEEEeCCC-eEEeeeEEECCCCC
Confidence 35666666655322 3589999999 9987 55554 3333344 57799999998643
No 209
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=76.94 E-value=4.3 Score=29.93 Aligned_cols=54 Identities=6% Similarity=0.224 Sum_probs=36.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..+.+.+.+.+... +..+. ...|..+.. ..+.+.+.+.++.++.+|++|+|+-.
T Consensus 66 ~~l~~~~~~~~~~~-----~~~~~-~~~v~~~~~-~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 66 NELMMNMRTQSEKY-----GTTII-TETIDHVDF-STQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHHT-----TCEEE-CCCEEEEEC-SSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHhhc-----CcEEE-EeEEEEeec-CCCceEEEECCCeEEEEeEEEEcccc
Confidence 34555554444322 12444 456777776 66677788888899999999999964
No 210
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=75.79 E-value=5 Score=31.68 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=29.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+++ ...|+.|+. .++ +|++.+|+++.+|++|+|+-.
T Consensus 74 v~~~-~~~v~~id~-~~~--~V~~~~g~~i~~d~lviAtG~ 110 (437)
T 3sx6_A 74 IHFI-AQSAEQIDA-EAQ--NITLADGNTVHYDYLMIATGP 110 (437)
T ss_dssp CEEE-CSCEEEEET-TTT--EEEETTSCEEECSEEEECCCC
T ss_pred CEEE-EeEEEEEEc-CCC--EEEECCCCEEECCEEEECCCC
Confidence 4666 469999987 544 577788888999999999865
No 211
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=75.66 E-value=2.8 Score=33.33 Aligned_cols=40 Identities=15% Similarity=0.273 Sum_probs=31.4
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeC-C--CcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCA-D--GTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~-~--g~~~~ad~VI~t~P~ 105 (147)
.+++++++|..|+. .++.+.+... + ++++.+|++|+|+-.
T Consensus 73 v~~~~~~~v~~i~~-~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 73 ANVQMRHQVTNVDP-ETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp CEEEESEEEEEEEG-GGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CEEEeCCEEEEEEc-CCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 37889999999987 6667777652 2 457999999999863
No 212
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=73.99 E-value=6 Score=30.84 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=30.0
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.++++ ++|++|+. .+. .|++.+|+++.+|++|+|+-.
T Consensus 72 i~~~~-~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 72 IELIS-DRMVSIDR-EGR--KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp EEEEC-CCEEEEET-TTT--EEEESSSCEEECSEEEECCCE
T ss_pred CEEEE-EEEEEEEC-CCC--EEEECCCCEEECCEEEEeeCC
Confidence 37888 99999987 544 567788889999999999864
No 213
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=73.67 E-value=3 Score=31.45 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=29.8
Q ss_pred cceEEcCCceEEEEecCCC--cEEEEe-CCC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPK--GVVVTC-ADG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~--~v~v~~-~~g--~~~~ad~VI~t~P~ 105 (147)
|.++++++.|.+|.. +++ ++.+.. .+| +++.+|.||+++..
T Consensus 205 gV~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 205 KIRFLTNHTVVAVDG-DTTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp TEEEECSEEEEEEEC-SSSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred CcEEEeCceeEEEec-CCcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 458999999999987 443 255543 244 57899999999854
No 214
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=71.57 E-value=7.3 Score=30.63 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=28.9
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
|.+++. ..|+.|+. .+. .|++.+|+++.+|++|+|+-.
T Consensus 70 gv~~~~-~~v~~id~-~~~--~v~~~~g~~i~~d~liiAtG~ 107 (430)
T 3h28_A 70 NIEFIN-EKAESIDP-DAN--TVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp TEEEEC-SCEEEEET-TTT--EEEETTCCEEECSEEEECCCC
T ss_pred CCEEEE-EEEEEEEC-CCC--EEEECCCcEEECCEEEEcCCc
Confidence 346765 48999987 444 567788888999999999854
No 215
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=71.35 E-value=4.5 Score=34.04 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=29.8
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. +++.++ .+| +++.+|.||+++..
T Consensus 587 GV~v~~~~~v~~i~~---~~v~~~-~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 587 GVKMIPGVSYQKIDD---DGLHVV-INGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp TCEEECSCEEEEEET---TEEEEE-ETTEEEEECCSEEEECCCE
T ss_pred CCEEEeCcEEEEEeC---CeEEEe-cCCeEEEEeCCEEEECCCc
Confidence 358999999999974 356665 567 57899999999854
No 216
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.26 E-value=5.1 Score=31.77 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=28.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC-cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG-TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g-~~~~ad~VI~t~P~ 105 (147)
.+++.++.+. + +++.+.|++.+| +++.+|++|+|+-.
T Consensus 106 v~~~~g~~~~-i---d~~~v~V~~~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 106 VEIVKGEAYF-V---DANTVRVVNGDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp CEEEESEEEE-E---ETTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CEEEEEEEEE-c---cCCeEEEEeCCCcEEEEeCEEEEecCC
Confidence 4788887654 4 335788888887 68999999999854
No 217
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=68.67 E-value=7.9 Score=30.06 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=27.0
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
.+++.+ .|++|+. ++..+.+...++ .++.+|+||+|+-.
T Consensus 71 v~~~~~-~v~~i~~-~~~~V~~~~g~~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 71 IQFQEG-TVEKIDA-KSSMVYYTKPDGSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp CEEEEC-EEEEEET-TTTEEEEECTTSCEEEEECSEEEECCCC
T ss_pred eEEEEe-eEEEEeC-CCCEEEEccCCcccceeeCCEEEECCCC
Confidence 378877 9999987 555555443222 24899999999754
No 218
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=68.64 E-value=7.8 Score=31.28 Aligned_cols=55 Identities=13% Similarity=0.189 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 44 YGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 44 ~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
...+.+.+.+.+ .. +.++++++.|.+|.. .++.+.+.. .+++ .+.+|++|+|+-.
T Consensus 160 ~~~~~~~l~~~l-~~-----~v~~~~~~~v~~i~~-~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 160 SRKVVEELVGKL-NE-----NTKIYLETSALGVFD-KGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHHHTC-CT-----TEEEETTEEECCCEE-CSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHHH-hc-----CCEEEcCCEEEEEEc-CCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 345666777766 22 357899999999988 666666554 4554 6899999999854
No 219
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=67.78 E-value=6.2 Score=32.11 Aligned_cols=55 Identities=7% Similarity=0.132 Sum_probs=34.3
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCC---CcEEEE--eCCC-c--EEEcCEEEEecCh
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDP---KGVVVT--CADG-T--QYSADRILITVSL 105 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~---~~v~v~--~~~g-~--~~~ad~VI~t~P~ 105 (147)
.+.+.+.+.+... |.++++++.|++|....+ +++.++ ..+| + ++.+|.||+++..
T Consensus 251 ~~~~~~~~~l~~~-----GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 251 DMANKIGEHMEEH-----GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHHT-----TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHC-----CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 3444454444433 458999998888875222 345444 4455 2 4689999999854
No 220
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=67.75 E-value=6.9 Score=32.14 Aligned_cols=42 Identities=14% Similarity=0.114 Sum_probs=29.6
Q ss_pred cceEEcCCceEEEEecCCC------cE---EEEe-CCCc--EEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPK------GV---VVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~------~v---~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
|.+|+.+++|++|..++++ ++ .+.. .+|+ ++.||.||+|+--
T Consensus 153 gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 153 NIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGG 206 (540)
T ss_dssp TEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCC
T ss_pred CCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 3589999999999862223 43 3333 3565 6899999999854
No 221
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.14 E-value=9.8 Score=31.35 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=34.2
Q ss_pred HHHHHHHhhCCCCCCCCCcceEEcCCceEEEEec------C--CCcEEEE--eCCCcEEE--cCEEEEecC
Q psy13542 46 NVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWE------D--PKGVVVT--CADGTQYS--ADRILITVS 104 (147)
Q Consensus 46 ~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~------~--~~~v~v~--~~~g~~~~--ad~VI~t~P 104 (147)
.+.+.+.+.+... |.++++++.+++|... . ++++.++ ..+|+++. +|.||+++.
T Consensus 327 ~~~~~~~~~l~~~-----gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G 392 (598)
T 2x8g_A 327 QMAEKVGDYMENH-----GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVG 392 (598)
T ss_dssp HHHHHHHHHHHHT-----TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHhC-----CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeC
Confidence 3444444444332 4589999988888641 1 1445554 46776665 999999984
No 222
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=67.07 E-value=6.9 Score=31.79 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=29.3
Q ss_pred ceEEcCCceEEEEecCC-C-c-EEEEeC--CC-----cEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDP-K-G-VVVTCA--DG-----TQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~-~-~-v~v~~~--~g-----~~~~ad~VI~t~P~~ 106 (147)
.+|++++.|++|.. ++ + + +.|... +| .++.|+.||+|.-.-
T Consensus 242 ~~i~~~~~v~~i~~-~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 242 LTITTLHRVTKVAP-ATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp EEEECSEEEEEEEE-CSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred cEEEeCCEEEEEEE-CCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 38999999999998 44 3 2 334442 56 368899999987543
No 223
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=66.57 E-value=7.3 Score=31.57 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=29.2
Q ss_pred ceEEcCCceEEEEecCCC-c-EEEEe--CCC-----cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPK-G-VVVTC--ADG-----TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~-~-v~v~~--~~g-----~~~~ad~VI~t~P~ 105 (147)
.+|++++.|++|..++++ + +.|.+ .+| .++.|+.||+|.-.
T Consensus 237 ~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~ 286 (504)
T 1n4w_A 237 VTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGS 286 (504)
T ss_dssp EEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCC
Confidence 389999999999983223 2 33444 366 36889999998854
No 224
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=65.60 E-value=9.3 Score=31.09 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=29.7
Q ss_pred cceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGV-VVTCA---DGT--QYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v-~v~~~---~g~--~~~ad~VI~t~P 104 (147)
|.++++++.|++|.. +++++ .|.+. +|+ ++.+|.||+++.
T Consensus 405 gV~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 405 NVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp TEEEECSEEEEEEEE-CSSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEeCCEEEEEEc-CCCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 458999999999987 55554 34433 453 689999999975
No 225
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=65.38 E-value=5.1 Score=31.86 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.2
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
.+++.++.+. . +++.+.|.+.+| +++.+|++|+|+-.
T Consensus 106 v~~~~g~~~~---i-d~~~v~V~~~~G~~~~~~~d~lViAtG~ 144 (464)
T 2a8x_A 106 ITEIHGYGTF---A-DANTLLVDLNDGGTESVTFDNAIIATGS 144 (464)
T ss_dssp CEEECEEEEE---S-SSSEEEEEETTSCCEEEEEEEEEECCCE
T ss_pred CEEEEeEEEE---e-cCCeEEEEeCCCceEEEEcCEEEECCCC
Confidence 4788776543 3 456788888888 68999999999854
No 226
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=64.88 E-value=7.2 Score=32.07 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=26.3
Q ss_pred CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 70 ~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
+.+|++|.. ++ |.+.||+.+.+|.||+|+-+..
T Consensus 352 ~~~I~~it~---~g--v~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 352 ENPIREVTA---KG--VVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp TSCEEEECS---SE--EEETTCCEEECSEEEECCCBSC
T ss_pred CCCccEEec---Ce--EEcCCCCEEECCEEEECCccCc
Confidence 678888865 33 6678998899999999996653
No 227
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=63.05 E-value=11 Score=29.81 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=30.7
Q ss_pred eEEcCCceEEEEecCCCcEEEEeC---CCcEEEcCEEEEecChh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCA---DGTQYSADRILITVSLG 106 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~---~g~~~~ad~VI~t~P~~ 106 (147)
+++++++|++|+. ....+.+... ++.++.+|++|+|+-..
T Consensus 73 ~~~~~~~V~~id~-~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 73 TVKTYHEVIAIND-ERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp EEEETEEEEEEET-TTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred EEEeCCeEEEEEc-cCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 7899999999998 6666666543 23468899999998753
No 228
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=62.80 E-value=9.8 Score=29.33 Aligned_cols=37 Identities=22% Similarity=0.412 Sum_probs=28.2
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLG 106 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~ 106 (147)
++.. ..|+.|+. .+. +|++.+|+++.+|++|+|+-..
T Consensus 71 ~~i~-~~v~~id~-~~~--~v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 71 QVVH-DSALGIDP-DKK--LVKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp EEEC-SCEEEEET-TTT--EEEETTSCEEECSEEEECCCEE
T ss_pred EEEE-eEEEEEEc-cCc--EEEecccceeecceeeeccCCc
Confidence 5554 47899987 443 4677889999999999998753
No 229
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=59.47 E-value=22 Score=28.23 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=28.4
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcE--EEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQ--YSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~--~~ad~VI~t~P~ 105 (147)
.++..+ .|+.+.. +.+.|.+.+|++ +.+|++|+|+-.
T Consensus 104 v~~~~g-~v~~id~---~~~~V~~~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 104 LTFYKG-YVKIKDP---THVIVKTDEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp EEEESE-EEEEEET---TEEEEEETTSCEEEEEEEEEEECCCE
T ss_pred CEEEEe-EEEEecC---CeEEEEcCCCcEEEEecCEEEECCCC
Confidence 466665 5666653 578888888988 999999999854
No 230
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=58.92 E-value=18 Score=29.77 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=27.7
Q ss_pred eEEc--CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 66 KLLL--KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 66 ~i~l--~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
++.. +++|++|.. ++ |.+.+| .+.+|.||+|+-+..
T Consensus 354 ~lv~~~~~~I~~it~---~g--v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 354 HLVDIREAPIQEVTP---EG--IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp EEEETTTSCEEEEET---TE--EEESSC-EEECSEEEECCCCBS
T ss_pred EEEecCCCCceEEcc---Ce--EEeCCC-eeecCEEEECCcccc
Confidence 4543 688888865 33 566899 999999999997765
No 231
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=58.62 E-value=7.8 Score=29.23 Aligned_cols=42 Identities=7% Similarity=0.054 Sum_probs=29.8
Q ss_pred cceEEcCCceEEEEecCCCcEEE-Ee-CCC--cEEEcCEEEEecChh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVV-TC-ADG--TQYSADRILITVSLG 106 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v-~~-~~g--~~~~ad~VI~t~P~~ 106 (147)
|.+++++++|+.+.. +++++.. .. .+| .+++||.||-|--.+
T Consensus 116 G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 116 GADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp TCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 358999999999988 5565432 22 233 368999999987543
No 232
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=57.63 E-value=10 Score=29.14 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=27.7
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
++++++.|+.|.. .+.. |++.+ .++.+|++|+|+-.
T Consensus 76 ~~~~~~~v~~i~~-~~~~--v~~~~-~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 76 RILTHTRVTGIDP-GHQR--IWIGE-EEVRYRDLVLAWGA 111 (384)
T ss_dssp EEECSCCCCEEEG-GGTE--EEETT-EEEECSEEEECCCE
T ss_pred EEEeCCEEEEEEC-CCCE--EEECC-cEEECCEEEEeCCC
Confidence 7889999999987 4444 44444 47999999999864
No 233
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=57.28 E-value=16 Score=30.66 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=29.2
Q ss_pred c-eEEcCCceEEEEecCCC---cE---EEE-eCCCc--EEEcCEEEEecCh
Q psy13542 65 K-KLLLKKEVTKINWEDPK---GV---VVT-CADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~-~i~l~~~V~~I~~~~~~---~v---~v~-~~~g~--~~~ad~VI~t~P~ 105 (147)
. +|+.+++|+++.. +++ ++ .+. ..+|+ ++.|+.||+|+--
T Consensus 167 v~~i~~~~~v~~L~~-~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 167 EENIYERVFIFELLK-DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp GGGEECSEEEEEEEE-CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred CcEEEecCEEEEEEE-cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 5 6999999999987 544 54 222 25665 6899999998743
No 234
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=56.22 E-value=8.6 Score=30.60 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=28.3
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cE------EEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQ------YSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~------~~ad~VI~t~P~~ 106 (147)
.+++.++.+. . +++.++|++.+| ++ +.+|++|+|+-..
T Consensus 111 v~~~~g~~~~---~-~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 111 VTYYKGNGSF---E-DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp CEEEESEEEE---S-SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred CEEEEEEEEE---c-cCCeEEEEecCCCcccccccceEEeCEEEECcCCC
Confidence 4788887664 2 455788887777 56 9999999998653
No 235
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=55.14 E-value=11 Score=31.56 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=28.9
Q ss_pred ceEEcCCceEEEEecCCC-c---EEEEe-CCCc--EEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPK-G---VVVTC-ADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~-~---v~v~~-~~g~--~~~ad~VI~t~P~ 105 (147)
.+|++++.|++|..+.++ + |.+.. .+|+ ++.||.||+++-.
T Consensus 275 v~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~ 322 (623)
T 3pl8_A 275 FNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGA 322 (623)
T ss_dssp EEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCT
T ss_pred EEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCC
Confidence 489999999999883221 2 34443 3564 6789999999854
No 236
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.08 E-value=11 Score=29.79 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=28.1
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
.+++.++.+. + +++.+.|++.+| +++++|++|+|+-.
T Consensus 111 v~~~~g~~~~-~---~~~~~~v~~~~G~~~~i~~d~lIiAtGs 149 (470)
T 1dxl_A 111 VTYVKGYGKF-V---SPSEISVDTIEGENTVVKGKHIIIATGS 149 (470)
T ss_dssp CEEEESCEEE-E---ETTEEEECCSSSCCEEEECSEEEECCCE
T ss_pred CEEEEeEEEE-e---cCCEEEEEeCCCceEEEEcCEEEECCCC
Confidence 3788888654 4 335788887777 68999999999864
No 237
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=54.38 E-value=6.2 Score=32.03 Aligned_cols=39 Identities=10% Similarity=0.362 Sum_probs=24.2
Q ss_pred eEEcCCceEEEEecCC-CcEEE------------EeCCCcEEEcCEEEEecC
Q psy13542 66 KLLLKKEVTKINWEDP-KGVVV------------TCADGTQYSADRILITVS 104 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~-~~v~v------------~~~~g~~~~ad~VI~t~P 104 (147)
++..+..|..+....+ +.+.| .+.+|+++.+|.||+||-
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATG 406 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATG 406 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCC
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcC
Confidence 5666667777765211 22333 345788999999999993
No 238
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=54.32 E-value=10 Score=32.08 Aligned_cols=23 Identities=17% Similarity=0.050 Sum_probs=17.3
Q ss_pred eEEcCCceEEEEecC-------CCcEEEEe
Q psy13542 66 KLLLKKEVTKINWED-------PKGVVVTC 88 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~-------~~~v~v~~ 88 (147)
+|++++.|+++..+. +++|+|++
T Consensus 138 ~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 138 KVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp CEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred EEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 799999999998832 24677754
No 239
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=54.09 E-value=14 Score=29.24 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=26.9
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
.+++.++ ++.+.. +.+.|.+.+| +++.+|++|+|+-.
T Consensus 110 v~~~~g~-~~~~~~---~~~~v~~~~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 110 ITVVHGE-ARFKDD---QSLTVRLNEGGERVVMFDRCLVATGA 148 (467)
T ss_dssp EEEEEEE-EEEEET---TEEEEEETTSSEEEEECSEEEECCCE
T ss_pred eEEEEEE-EEEccC---CEEEEEeCCCceEEEEeCEEEEeCCC
Confidence 3566653 555543 4688888888 68999999999864
No 240
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=52.52 E-value=21 Score=29.26 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=29.0
Q ss_pred cceEEcCCceEEEEecCC-CcE-EEEeC-C--Cc--EEEcC-EEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDP-KGV-VVTCA-D--GT--QYSAD-RILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~-~~v-~v~~~-~--g~--~~~ad-~VI~t~P~ 105 (147)
+.+|++++.|++|.. ++ +++ .|.+. + |+ ++.|+ .||+|+-.
T Consensus 223 ~~~i~~~~~V~~i~~-~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 223 NFTLLTGLRARQLVF-DADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp TEEEECSCEEEEEEE-CTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CcEEEeCCEEEEEEE-CCCCeEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 359999999999998 54 443 34432 2 53 68898 89988644
No 241
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=52.20 E-value=7.6 Score=28.86 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=25.4
Q ss_pred EEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 67 LLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 67 i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
+..+..|+++.. + .|.+.+|+++.+|.||+++..
T Consensus 250 i~~~~~v~~~~~---~--~v~~~~g~~i~~D~vi~a~G~ 283 (357)
T 4a9w_A 250 LAAVPPPARFSP---T--GMQWADGTERAFDAVIWCTGF 283 (357)
T ss_dssp CCEECCCSEEET---T--EEECTTSCEEECSEEEECCCB
T ss_pred eEEecCcceEeC---C--eeEECCCCEecCCEEEECCCc
Confidence 556666766654 2 266788999999999999854
No 242
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=51.74 E-value=15 Score=32.48 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=28.8
Q ss_pred cceEEcCCceEEEEecC-CCc---EEEEe--C---CC--cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWED-PKG---VVVTC--A---DG--TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~-~~~---v~v~~--~---~g--~~~~ad~VI~t~P 104 (147)
|.++++++.|++|.. . +++ +++.. . +| +++.+|.||+++.
T Consensus 330 GV~v~~~~~v~~i~~-~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 330 GVQVISGSVVVDTEA-DENGELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp TCCEEETEEEEEEEE-CTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred CeEEEeCCEeEEEec-cCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 458999999999986 3 443 34443 1 24 6799999999985
No 243
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=51.07 E-value=23 Score=28.73 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=28.8
Q ss_pred ceEEcCCceEEEEecCCCcE-EEEeCC---Cc--EE---EcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGV-VVTCAD---GT--QY---SADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v-~v~~~~---g~--~~---~ad~VI~t~P~ 105 (147)
.+|++++.|++|.. +++++ .|.+.+ |+ ++ .+|.||+|+-.
T Consensus 211 ~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~ 259 (546)
T 1kdg_A 211 FTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGA 259 (546)
T ss_dssp EEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHH
T ss_pred cEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCCh
Confidence 48999999999998 54443 455443 63 33 88999999754
No 244
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=49.39 E-value=26 Score=28.60 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=27.8
Q ss_pred cceEEcCCceEEEEecCCC---cE-EEEe--CCCcE--E---EcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPK---GV-VVTC--ADGTQ--Y---SADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~---~v-~v~~--~~g~~--~---~ad~VI~t~P~ 105 (147)
+.+|++++.|++|.. +++ ++ .|.+ .+|+. + .++.||+|+-.
T Consensus 208 ~~~v~~~~~v~~i~~-~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa 259 (536)
T 1ju2_A 208 NLRVGVHASVEKIIF-SNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGT 259 (536)
T ss_dssp TEEEEESCEEEEEEE-CCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHH
T ss_pred CcEEEeCCEEEEEEE-CCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcc
Confidence 358999999999998 442 32 3443 35653 4 56889998743
No 245
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.87 E-value=8.8 Score=30.72 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=27.0
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCC------------cEEEcCEEEEecChh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADG------------TQYSADRILITVSLG 106 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g------------~~~~ad~VI~t~P~~ 106 (147)
.+++.++.+. + +++.+.|++.+| +++.+|++|+|+-..
T Consensus 110 v~~~~g~~~~-~---~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 110 VDVIQGDGQF-L---DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp CEEEEEEEEE-E---ETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred cEEEeeEEEE-c---cCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCC
Confidence 3777777554 2 345677876666 679999999998654
No 246
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=46.38 E-value=26 Score=28.78 Aligned_cols=32 Identities=13% Similarity=0.373 Sum_probs=25.1
Q ss_pred CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 70 ~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+|++|.. ++ |.+.+| .+.+|.||+|+-+..
T Consensus 365 ~~~I~~it~---~g--v~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 365 STPIVGMDE---TG--IVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp TSCEEEEET---TE--EEESSC-EEECSEEEECCCEEE
T ss_pred CCCceEEeC---Cc--EEeCCC-ceecCEEEECCcccc
Confidence 578888865 33 566889 999999999997754
No 247
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=46.25 E-value=17 Score=29.17 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=27.6
Q ss_pred ceEEcCCceEEEEecC----CCcEEEEeCCCc--EEEcCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWED----PKGVVVTCADGT--QYSADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~----~~~v~v~~~~g~--~~~ad~VI~t~P 104 (147)
.+++.++ ++.|.. . ++.+.|.+.+|+ ++.+|++|+|+-
T Consensus 110 v~~~~g~-~~~i~~-~~~~~~~~~~V~~~~g~~~~~~~d~lviATG 153 (499)
T 1xdi_A 110 VQVIAGR-GELIDS-TPGLARHRIKATAADGSTSEHEADVVLVATG 153 (499)
T ss_dssp CEEEESE-EEECCS-SSCCSSEEEEEECTTSCEEEEEESEEEECCC
T ss_pred CEEEEeE-EEEecC-cccCCCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 3788875 666543 2 256788887886 799999999974
No 248
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=43.96 E-value=19 Score=28.50 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=27.0
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
+++.++.+ .+. ++.+.|.+.+| +++.+|++|+|+-.
T Consensus 109 ~~~~g~~~-~i~---~~~~~v~~~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 109 TYYKGEGS-FET---AHSIRVNGLDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp EEEEEEEE-EEE---TTEEEEEETTSCEEEEEEEEEEECCCE
T ss_pred EEEEEEEE-Eee---CCEEEEEecCCceEEEEcCEEEECCCC
Confidence 67777644 343 35788888888 78999999999864
No 249
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=43.84 E-value=19 Score=28.32 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=24.7
Q ss_pred EEcCCceEEEEecCCCcEEEEeCCCcE-EEcCEEEEecC
Q psy13542 67 LLLKKEVTKINWEDPKGVVVTCADGTQ-YSADRILITVS 104 (147)
Q Consensus 67 i~l~~~V~~I~~~~~~~v~v~~~~g~~-~~ad~VI~t~P 104 (147)
|.++..|+++.. +++ .|++.||++ +.+|.||+|+-
T Consensus 254 i~~~~~v~~~~~-~~~--~v~~~dG~~~~~~D~vi~atG 289 (447)
T 2gv8_A 254 LQQVPEITKFDP-TTR--EIYLKGGKVLSNIDRVIYCTG 289 (447)
T ss_dssp EEEECCEEEEET-TTT--EEEETTTEEECCCSEEEECCC
T ss_pred eEEecCeEEEec-CCC--EEEECCCCEeccCCEEEECCC
Confidence 455667777764 333 466678866 68999999984
No 250
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=43.06 E-value=25 Score=28.47 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=24.5
Q ss_pred CceEEEEecCCCcEEEEe------------------CCCcEEEcCEEEEecCh
Q psy13542 71 KEVTKINWEDPKGVVVTC------------------ADGTQYSADRILITVSL 105 (147)
Q Consensus 71 ~~V~~I~~~~~~~v~v~~------------------~~g~~~~ad~VI~t~P~ 105 (147)
..|++|+. +...|.+.. .++.++.+|++|+|+-.
T Consensus 116 ~~v~~ID~-~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs 167 (502)
T 4g6h_A 116 AEATSINP-DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA 167 (502)
T ss_dssp EEEEEEEG-GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC
T ss_pred EEEEEEEh-hhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc
Confidence 46778877 556666543 34668999999999864
No 251
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=42.66 E-value=14 Score=31.41 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=28.2
Q ss_pred cceEEcCCceEEEEecCCCcEEEEe--CCC-cE------------------EEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTC--ADG-TQ------------------YSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~--~~g-~~------------------~~ad~VI~t~P~ 105 (147)
|.++++++.|++|.. +++.++. .++ ++ +.||.||+++..
T Consensus 585 GV~i~~~~~v~~i~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 585 HVEELGDHFCSRIEP---GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp TCEEECSEEEEEEET---TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred CCEEEcCcEEEEEEC---CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 458999999999975 3455543 233 33 899999999863
No 252
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=42.62 E-value=32 Score=26.78 Aligned_cols=30 Identities=10% Similarity=0.038 Sum_probs=19.9
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEe
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINW 78 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~ 78 (147)
..+.+.|.+.+... .|.+++.++.|+.+..
T Consensus 160 ~d~~~~L~~~a~~~----~gV~i~~~~~V~dLi~ 189 (344)
T 3jsk_A 160 ALFTSTVLSKVLQR----PNVKLFNATTVEDLIT 189 (344)
T ss_dssp HHHHHHHHHHHHTC----TTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHhC----CCCEEEeCCEEEEEEe
Confidence 45556666655321 0358999999999977
No 253
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=42.49 E-value=16 Score=29.19 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=26.7
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCc--EEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGT--QYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~--~~~ad~VI~t~P~ 105 (147)
.+++.++ ++.| +++.+.|.+.+|+ ++.+|++|+|+-.
T Consensus 120 v~~~~g~-~~~i---~~~~~~v~~~~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 120 VDVVFGW-ARFN---KDGNVEVQKRDNTTEVYSANHILVATGG 158 (479)
T ss_dssp EEEEEEE-EEEC---TTSCEEEEESSSCCEEEEEEEEEECCCE
T ss_pred CEEEEeE-EEEe---eCCEEEEEeCCCcEEEEEeCEEEEcCCC
Confidence 3666664 5444 3356888888886 7999999999964
No 254
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=41.91 E-value=30 Score=27.49 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=22.6
Q ss_pred CceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 71 KEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 71 ~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
..|++|.. ++ |.+.||+++.+|.||+|+..
T Consensus 245 ~~V~~i~~---~~--V~~~dG~~i~~D~Vi~atG~ 274 (464)
T 2xve_A 245 PNLVRVDT---EN--AYFADGSSEKVDAIILCTGY 274 (464)
T ss_dssp SCEEEECS---SE--EEETTSCEEECSEEEECCCB
T ss_pred CCeEEEeC---CE--EEECCCCEEeCCEEEECCCC
Confidence 66777643 33 56678989999999999954
No 255
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=39.98 E-value=36 Score=24.97 Aligned_cols=36 Identities=8% Similarity=0.053 Sum_probs=25.6
Q ss_pred eEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEec
Q psy13542 66 KLLLKKEVTKINWEDPKG-VVVTCADGTQYSADRILITV 103 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~ 103 (147)
.++.+ .|+.+.. +++. ..|++.+|+++.+|.+|+++
T Consensus 196 ~~~~~-~v~~~~~-~~~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 196 PVITE-SIRTLQG-EGGYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CEECS-CEEEEES-GGGCCCEEEETTSCEECCCEEEECC
T ss_pred eEeee-eEEEeec-CCCeeeeeeccccceeeecceeeee
Confidence 55554 5777776 4444 35788999999999988765
No 256
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=39.72 E-value=32 Score=27.39 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=28.6
Q ss_pred cceEEcCCceEEEEecCCC--cEEEEe--------------CCC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPK--GVVVTC--------------ADG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~--~v~v~~--------------~~g--~~~~ad~VI~t~P~ 105 (147)
|..+++++.+.+|.. ++. ++++.. .+| +++.||.||.++..
T Consensus 266 gv~i~~~~~~~~i~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 266 RMVFRFLTSPIEIKG-KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEECSEEEEEEEC-SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred eEEEEeCCCCeEEec-CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 468999999999986 422 244431 134 46899999999853
No 257
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=38.16 E-value=41 Score=24.61 Aligned_cols=37 Identities=8% Similarity=-0.019 Sum_probs=25.3
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
.+..+..+..... . .. .+...++++++||++|+|+-.
T Consensus 78 ~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 78 VYQYGDIKSVEDK-G-EY-KVINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp EEEECCCCEEEEC-S-SC-EEEECSSCEEEEEEEEECCCE
T ss_pred cccceeeeeeeee-e-cc-eeeccCCeEEEeceeEEcccC
Confidence 5677666666554 2 22 344556779999999999964
No 258
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=36.62 E-value=37 Score=27.07 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=28.1
Q ss_pred cceEEcCCceEEEEecCC-C-c---EEEEeC-------------CC--cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDP-K-G---VVVTCA-------------DG--TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~-~-~---v~v~~~-------------~g--~~~~ad~VI~t~P 104 (147)
|..+++++.+.+|.. ++ + + +++... +| +++.+|.||.++.
T Consensus 271 gv~~~~~~~~~~i~~-~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G 330 (460)
T 1cjc_A 271 AWGLRFFRSPQQVLP-SPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIG 330 (460)
T ss_dssp EEEEECSEEEEEEEE-CTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCC
T ss_pred eEEEECCCChheEEc-CCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCC
Confidence 468999999999987 42 3 3 333210 34 5789999999984
No 259
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=36.49 E-value=28 Score=27.56 Aligned_cols=37 Identities=22% Similarity=0.109 Sum_probs=26.6
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCC-C-cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCAD-G-TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~-g-~~~~ad~VI~t~P~ 105 (147)
.+++.++.+ .+ +++.+.|++.+ | +++.+|++|+|+-.
T Consensus 112 v~~~~g~~~-~~---~~~~~~v~~~~gg~~~~~~d~lViAtGs 150 (474)
T 1zmd_A 112 VVHVNGYGK-IT---GKNQVTATKADGGTQVIDTKNILIATGS 150 (474)
T ss_dssp CEEEESEEE-EE---ETTEEEEECTTSCEEEEEEEEEEECCCE
T ss_pred CEEEEEEEE-Ee---cCCEEEEEecCCCcEEEEeCEEEECCCC
Confidence 377877543 34 23568888877 4 57999999999864
No 260
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=36.11 E-value=49 Score=26.84 Aligned_cols=32 Identities=16% Similarity=0.428 Sum_probs=23.9
Q ss_pred CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 70 KKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 70 ~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
+++|++|.. ++ |.+.| +++.+|.||+|+-...
T Consensus 360 ~~~i~~i~~---~g--v~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 360 SAPIETITP---RG--VRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp TSCEEEECS---SE--EEESS-CEEECSEEEECCCCCC
T ss_pred CCCceEEcC---Ce--EEeCC-eEEecCEEEEcCCccc
Confidence 678888854 44 45567 7899999999996543
No 261
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=35.82 E-value=25 Score=27.72 Aligned_cols=35 Identities=20% Similarity=0.175 Sum_probs=25.3
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~ 105 (147)
+++.++.+. + +++.+.|.+ +|+++.+|++|+|+-.
T Consensus 105 ~~~~g~~~~-i---~~~~~~v~~-~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 105 ARHQGTARF-L---SERKVLVEE-TGEELEARYILIATGS 139 (455)
T ss_dssp EEEESCEEE-S---SSSEEEETT-TCCEEEEEEEEECCCE
T ss_pred EEEEeEEEE-e---cCCeEEEee-CCEEEEecEEEECCCC
Confidence 677776442 2 445677766 7788999999999854
No 262
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=35.38 E-value=34 Score=28.96 Aligned_cols=39 Identities=10% Similarity=0.227 Sum_probs=27.9
Q ss_pred ceEEcCCceEEEEecCCC---cE---EEEe-CCCc--EEEcCEEEEecC
Q psy13542 65 KKLLLKKEVTKINWEDPK---GV---VVTC-ADGT--QYSADRILITVS 104 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~---~v---~v~~-~~g~--~~~ad~VI~t~P 104 (147)
.+|+.++.|..+.. +++ ++ .+.. .+|+ .+.|+.||+|+-
T Consensus 183 V~i~~~~~v~dLi~-~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 183 DRIIERIFIVKLLL-DKNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TTEECSEEECCCEE-CSSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred cEEEEceEEEEEEE-eCCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 37999999999887 444 43 2222 4553 589999999884
No 263
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=33.40 E-value=56 Score=26.99 Aligned_cols=38 Identities=21% Similarity=0.285 Sum_probs=26.5
Q ss_pred ceEEcCCceEEEEecC----C-C---cEEEEeCCC---cEEEc-CEEEEec
Q psy13542 65 KKLLLKKEVTKINWED----P-K---GVVVTCADG---TQYSA-DRILITV 103 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~----~-~---~v~v~~~~g---~~~~a-d~VI~t~ 103 (147)
-.|++++.|++|.. + + . +|++...+| .++.| +.||++.
T Consensus 223 L~Vlt~a~V~rIl~-~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsA 272 (566)
T 3fim_B 223 LSVLINAQVTKLVN-SGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSA 272 (566)
T ss_dssp EEEESSCEEEEEEC-CEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECC
T ss_pred eEEECCCEEEEEEe-ecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEec
Confidence 38999999999998 4 2 1 355544444 35677 6688886
No 264
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=33.36 E-value=49 Score=26.38 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=27.1
Q ss_pred eEEcCCceEEEEecCCCc---EEEEeCCC-cEEEcCEEEEec
Q psy13542 66 KLLLKKEVTKINWEDPKG---VVVTCADG-TQYSADRILITV 103 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~---v~v~~~~g-~~~~ad~VI~t~ 103 (147)
.|..++.|++|.. ++++ +.+...++ ..+.|+.||++.
T Consensus 227 ~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsA 267 (526)
T 3t37_A 227 TILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCA 267 (526)
T ss_dssp EEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECS
T ss_pred EEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcc
Confidence 7999999999998 5554 33444444 357899999987
No 265
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=32.06 E-value=45 Score=27.56 Aligned_cols=41 Identities=15% Similarity=0.183 Sum_probs=27.9
Q ss_pred ceEEcCCceEEEEecCC---Cc---EEEEeCCCc--EEEc-CEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDP---KG---VVVTCADGT--QYSA-DRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~---~~---v~v~~~~g~--~~~a-d~VI~t~P~ 105 (147)
.+|++++.|++|..+.+ ++ |.+...+|+ ++.| +.||+|.-.
T Consensus 246 l~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~ 295 (587)
T 1gpe_A 246 LEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGS 295 (587)
T ss_dssp EEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCT
T ss_pred cEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCC
Confidence 48999999999987321 12 333334664 5678 889998853
No 266
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=31.91 E-value=48 Score=19.51 Aligned_cols=29 Identities=24% Similarity=0.227 Sum_probs=23.3
Q ss_pred cceEEcCCceEEEEecCCCcEEEEeCCCcE
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVVVTCADGTQ 93 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~ 93 (147)
|+...+-.+|.+|.. ++.-+.|.+.+|.+
T Consensus 22 Gd~~yYparI~Si~s-~~~~Y~V~fKdgT~ 50 (66)
T 2l8d_A 22 GSVLYYEVQVTSYDD-ASHLYTVKYKDGTE 50 (66)
T ss_dssp TSSCEEEEEEEEEET-TTTEEEEEETTSCE
T ss_pred CCccceEEEEEEecc-CCceEEEEecCCCE
Confidence 457888899999995 77778999988844
No 267
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=31.63 E-value=35 Score=21.69 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=14.4
Q ss_pred EEEEeCCCcEEEcCEEE
Q psy13542 84 VVVTCADGTQYSADRIL 100 (147)
Q Consensus 84 v~v~~~~g~~~~ad~VI 100 (147)
++|++.||++..++.||
T Consensus 67 fRvt~~~G~~~v~~nVi 83 (100)
T 3ft1_A 67 FRFMSKGGMRNVFDEVI 83 (100)
T ss_dssp EEEEETTCCEEEEEEEE
T ss_pred EEEEEcCCcEEEECeEe
Confidence 78888899998888876
No 268
>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1
Probab=30.38 E-value=87 Score=20.18 Aligned_cols=21 Identities=19% Similarity=0.135 Sum_probs=12.7
Q ss_pred CCCCHHHHHHHhcCCCcceeE
Q psy13542 117 PPLPPKKLTAIELTNLTSIQQ 137 (147)
Q Consensus 117 p~Lp~~~~~ai~~~~~g~~~K 137 (147)
-++|++.++++.....+...|
T Consensus 131 ~~iP~~~~~~l~~~~~~~~~~ 151 (152)
T 2hx5_A 131 CALPEGIDRWLEASGVGKIGS 151 (152)
T ss_dssp CCCCHHHHHHHHHTC------
T ss_pred ecCCHHHHHHHHhhcccCccc
Confidence 368999999998877666554
No 269
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=30.20 E-value=59 Score=26.96 Aligned_cols=39 Identities=15% Similarity=0.361 Sum_probs=26.8
Q ss_pred ceEEcCCceEEEEecC-CC---cEEEEeCCCc--EEEc-CEEEEec
Q psy13542 65 KKLLLKKEVTKINWED-PK---GVVVTCADGT--QYSA-DRILITV 103 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~-~~---~v~v~~~~g~--~~~a-d~VI~t~ 103 (147)
-.|++++.|++|..+. ++ +|++...+|+ ++.| +.||++.
T Consensus 221 l~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsa 266 (577)
T 3q9t_A 221 ITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQ 266 (577)
T ss_dssp EEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECS
T ss_pred eEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcc
Confidence 3899999999999832 33 2445445564 4667 5688887
No 270
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=29.30 E-value=64 Score=28.66 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=27.2
Q ss_pred cceEEcCCceEEEEecCCCcEE-EEeC------CC---------cEEEcCEEEEecC
Q psy13542 64 SKKLLLKKEVTKINWEDPKGVV-VTCA------DG---------TQYSADRILITVS 104 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~v~-v~~~------~g---------~~~~ad~VI~t~P 104 (147)
|.++++++.+.+|.. .++++. |++. +| +++.||.||+++.
T Consensus 384 Gv~~~~~~~~~~i~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 384 KCEFLPFLSPRKVIV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp TCEEECSEEEEEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred CCEEEeCCCceEEEc-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 458889989998876 444442 3221 22 3689999999984
No 271
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=29.03 E-value=64 Score=26.79 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=26.7
Q ss_pred ceEEcCCceEEEEecC---CCc---EEEEeCCCc--EEEcC-EEEEec
Q psy13542 65 KKLLLKKEVTKINWED---PKG---VVVTCADGT--QYSAD-RILITV 103 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~---~~~---v~v~~~~g~--~~~ad-~VI~t~ 103 (147)
-.|++++.|++|..+. +++ |++...+|+ ++.|+ .||++.
T Consensus 242 L~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsA 289 (583)
T 3qvp_A 242 LQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAA 289 (583)
T ss_dssp EEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECS
T ss_pred cEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeC
Confidence 3899999999999832 333 333334664 46786 599987
No 272
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=27.41 E-value=56 Score=19.30 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=22.7
Q ss_pred ceEEcCCceEEEEecCCCcEEEEeCCCcE
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTCADGTQ 93 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~~~g~~ 93 (147)
+...+-.+|++|.. ++.-+.|.+.+|.+
T Consensus 26 d~~yYparItSits-~~~~Y~VkfKdgT~ 53 (68)
T 2dig_A 26 SSLYYEVEILSHDS-TSQLYTVKYKDGTE 53 (68)
T ss_dssp TCCEEEEEEEEEET-TTTEEEEECTTSCE
T ss_pred CccceEEEEEEecc-CCceEEEEecCCCE
Confidence 47888899999995 77778999888843
No 273
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=27.35 E-value=42 Score=21.73 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=14.3
Q ss_pred EEEEeCCCcEEEcCEEE
Q psy13542 84 VVVTCADGTQYSADRIL 100 (147)
Q Consensus 84 v~v~~~~g~~~~ad~VI 100 (147)
++|++.+|++..++.||
T Consensus 78 fRvtts~G~~~va~nVi 94 (108)
T 2jnz_A 78 FRFMSKGGMRNVFDEVI 94 (108)
T ss_dssp EEEEETTTEEEEEEEEE
T ss_pred EEEEEcCCcEEEECeEE
Confidence 78888899888888876
No 274
>1iwm_A Outer membrane lipoprotein LOLB; unclosed beta barrel, protein transport; 1.90A {Escherichia coli} SCOP: b.125.1.2 PDB: 1iwn_A*
Probab=26.60 E-value=64 Score=22.63 Aligned_cols=42 Identities=24% Similarity=0.435 Sum_probs=29.7
Q ss_pred cCCceEEEEecCCCcEEEEeCCCcEEEcCE---EE-----EecChhHHhhC
Q psy13542 69 LKKEVTKINWEDPKGVVVTCADGTQYSADR---IL-----ITVSLGVLKSN 111 (147)
Q Consensus 69 l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~---VI-----~t~P~~~l~~~ 111 (147)
+++.+.+|.. +++++++...+|+.+.++. ++ ..+|+..|..+
T Consensus 68 LG~t~~~l~~-~~~~~~L~~~~g~~~~a~d~e~Ll~~~~G~~lPv~~L~~W 117 (186)
T 1iwm_A 68 LGSTELELNA-QPGNVQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQW 117 (186)
T ss_dssp TSCEEEEEEE-ETTEEEEECTTSCEEEESCHHHHHHHHHSCCCCHHHHHHH
T ss_pred cCccEEEEEE-cCCEEEEEECCCCEEeCCCHHHHHHHHHCCcchHHHHHHH
Confidence 4567788888 7788889877887776533 23 56777777765
No 275
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=25.73 E-value=52 Score=25.93 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=25.1
Q ss_pred eEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 66 KLLLKKEVTKINWEDPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 66 ~i~l~~~V~~I~~~~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
++..++.+. . +++.+.|.+.+| +++.+|++|+|+-.
T Consensus 115 ~~~~g~~~~---~-~~~~~~v~~~~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 115 TLFEGHGKL---L-AGKKVEVTAADGSSQVLDTENVILASGS 152 (476)
T ss_dssp EEEESEEEE---C-STTCEEEECTTSCEEEECCSCEEECCCE
T ss_pred EEEEeEEEE---e-cCCEEEEEcCCCceEEEEcCEEEEcCCC
Confidence 555554332 2 456788888888 57899999999853
No 276
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=23.81 E-value=54 Score=21.76 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=26.0
Q ss_pred cCCceEEEEecCCCcEEEEeCCCc--EEEcCEEEEecChhH
Q psy13542 69 LKKEVTKINWEDPKGVVVTCADGT--QYSADRILITVSLGV 107 (147)
Q Consensus 69 l~~~V~~I~~~~~~~v~v~~~~g~--~~~ad~VI~t~P~~~ 107 (147)
+.-.|.+. . .++++.|.+.||. ++.++.||+.-|++.
T Consensus 22 YpG~V~~~-~-~~~ky~V~FdDg~~~~v~~k~iiv~d~ip~ 60 (123)
T 2g3r_A 22 YSGKITRD-V-GAGKYKLLFDDGYECDVLGKDILLCDPIPL 60 (123)
T ss_dssp EEEEEEEE-E-ETTEEEEEETTSCEEEEEGGGEECCSSCCT
T ss_pred cccEEEEe-c-cCCeEEEEEcCCCeeEeecceEEEecccCC
Confidence 33345554 3 5678999999984 467899998877774
No 277
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=23.76 E-value=60 Score=25.78 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=20.2
Q ss_pred CCCcEEEEeCCC--cEEEcCEEEEecC
Q psy13542 80 DPKGVVVTCADG--TQYSADRILITVS 104 (147)
Q Consensus 80 ~~~~v~v~~~~g--~~~~ad~VI~t~P 104 (147)
+++.+.|.+.+| +++.+|++|+|+-
T Consensus 141 ~~~~~~v~~~~g~~~~~~~d~lViATG 167 (491)
T 3urh_A 141 GQGKVSVTNEKGEEQVLEAKNVVIATG 167 (491)
T ss_dssp SSSEEEEECTTSCEEEEECSEEEECCC
T ss_pred cCCEEEEEeCCCceEEEEeCEEEEccC
Confidence 446788888777 5799999999984
No 278
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=23.48 E-value=74 Score=25.36 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=25.5
Q ss_pred ceEEcCCceEEEEecCCCcEEEEe---CCC---cEEEcCEEEEecCh
Q psy13542 65 KKLLLKKEVTKINWEDPKGVVVTC---ADG---TQYSADRILITVSL 105 (147)
Q Consensus 65 ~~i~l~~~V~~I~~~~~~~v~v~~---~~g---~~~~ad~VI~t~P~ 105 (147)
.+++.++ ++.|.. ..+.+.+ .+| +++.+|++|+|+-.
T Consensus 119 v~~~~g~-~~~i~~---~~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 119 LTFHQGF-GALQDN---HTVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp EEEEESE-EEEEET---TEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cEEEEeE-EEEeeC---CEEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 3677775 555543 4566654 366 68999999999864
No 279
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=23.09 E-value=75 Score=23.01 Aligned_cols=37 Identities=24% Similarity=0.171 Sum_probs=22.2
Q ss_pred cHHHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEe---cC-CCcEEEEeCCCcE
Q psy13542 43 GYGNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINW---ED-PKGVVVTCADGTQ 93 (147)
Q Consensus 43 G~~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~---~~-~~~v~v~~~~g~~ 93 (147)
|+++|...+.+..+ .+|.+|.. .. +..++|++.||+.
T Consensus 1 g~~~v~a~~~~l~G--------------~~v~~v~~~g~G~~~~vyrv~l~DG~~ 41 (288)
T 3f7w_A 1 GVNSVAARVTELTG--------------REVAAVAERGHSHRWHLYRVELADGTP 41 (288)
T ss_dssp CCHHHHHHHHHHHC--------------CCEEEEEEEEEETTEEEEEEEETTSCE
T ss_pred ChHHHHHHHHHhcC--------------CCeEEEEecCCCCCeEEEEEEECCCCE
Confidence 67777777766554 34555543 11 1236888889854
No 280
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=23.00 E-value=51 Score=26.21 Aligned_cols=26 Identities=31% Similarity=0.259 Sum_probs=20.3
Q ss_pred CCCcEEEEeCCC--cEEEcCEEEEecCh
Q psy13542 80 DPKGVVVTCADG--TQYSADRILITVSL 105 (147)
Q Consensus 80 ~~~~v~v~~~~g--~~~~ad~VI~t~P~ 105 (147)
+.+.+.|.+.+| +++.+|++|+|+-.
T Consensus 130 ~~~~v~v~~~~g~~~~~~~d~lViATGs 157 (488)
T 3dgz_A 130 DEHTVRGVDKGGKATLLSAEHIVIATGG 157 (488)
T ss_dssp SSSEEEEECTTSCEEEEEEEEEEECCCE
T ss_pred cCCeEEEEeCCCceEEEECCEEEEcCCC
Confidence 345678888777 47999999999863
No 281
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=22.72 E-value=1.3e+02 Score=23.06 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=35.0
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecC--C-C--cE---EEEe------------CCCcEEEc--------
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWED--P-K--GV---VVTC------------ADGTQYSA-------- 96 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~--~-~--~v---~v~~------------~~g~~~~a-------- 96 (147)
..+.+.|.+.+... + |.+++.+++|+.+..+. + + +| .+.. .++.++.|
T Consensus 146 ~~~~~~L~~~a~~~---~-GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~ 221 (326)
T 2gjc_A 146 ALFISTVLSKVLQL---P-NVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGT 221 (326)
T ss_dssp HHHHHHHHHHHHTS---T-TEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSC
T ss_pred HHHHHHHHHHHHHh---c-CcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccc
Confidence 45566665555321 0 35899999999998732 2 3 33 2221 13467999
Q ss_pred -------CEEEEecCh
Q psy13542 97 -------DRILITVSL 105 (147)
Q Consensus 97 -------d~VI~t~P~ 105 (147)
|.||.|+-.
T Consensus 222 ~~~~~~~~~VV~ATG~ 237 (326)
T 2gjc_A 222 RDLSQKHGVILSTTGH 237 (326)
T ss_dssp CCSSTTCCEEEECCCC
T ss_pred ccccccCCEEEECcCC
Confidence 999999954
No 282
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=22.03 E-value=51 Score=26.60 Aligned_cols=25 Identities=36% Similarity=0.553 Sum_probs=19.8
Q ss_pred CCcEEEEeCCCc--EEEcCEEEEecCh
Q psy13542 81 PKGVVVTCADGT--QYSADRILITVSL 105 (147)
Q Consensus 81 ~~~v~v~~~~g~--~~~ad~VI~t~P~ 105 (147)
.+.+.|.+.+|+ ++.+|++|+|+-.
T Consensus 157 ~~~v~v~~~~g~~~~i~~d~lViATGs 183 (519)
T 3qfa_A 157 PHRIKATNNKGKEKIYSAERFLIATGE 183 (519)
T ss_dssp TTEEEEECTTCCCCEEEEEEEEECCCE
T ss_pred CCEEEEEcCCCCEEEEECCEEEEECCC
Confidence 356788877774 7999999999863
No 283
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.06 E-value=18 Score=27.26 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=30.6
Q ss_pred HHHHHHHHhhCCCCCCCCCcceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEecChhH
Q psy13542 45 GNVFKLLMKQMPGQTPIDLSKKLLLKKEVTKINWEDPKGVVVTCADGTQYSADRILITVSLGV 107 (147)
Q Consensus 45 ~~l~~~l~~~l~~~~~~~~g~~i~l~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~P~~~ 107 (147)
..+.++|.+.+... |.+++. ++|++|.. . .+ +||.||+|+-...
T Consensus 142 ~~~~~~l~~~~~~~-----G~~i~~-~~v~~l~~-~-----------~~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 142 PKYCQYLARELQKL-----GATFER-RTVTSLEQ-A-----------FD-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEE-CCCSBGGG-T-----------CS-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHC-----CCEEEE-EEcccHhh-c-----------Cc-CCCEEEECCCcch
Confidence 56777777776543 458888 89998876 2 02 6888888876554
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=20.28 E-value=35 Score=27.24 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=25.5
Q ss_pred cceEEcCCceEEEEecCCCc---EEEE---e----C---------CC--cEEEcCEEEEecCh
Q psy13542 64 SKKLLLKKEVTKINWEDPKG---VVVT---C----A---------DG--TQYSADRILITVSL 105 (147)
Q Consensus 64 g~~i~l~~~V~~I~~~~~~~---v~v~---~----~---------~g--~~~~ad~VI~t~P~ 105 (147)
|.++++++.+.+|.. + ++ +.+. . . +| +++.||.||+++..
T Consensus 316 Gv~~~~~~~~~~i~~-~-g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 316 GVEFIWQAAPEGFTG-D-TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp TCEEECCSSSCCEEE-E-EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred CCEEEeCCCceEEeC-C-CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 457888888888864 2 22 2221 0 1 23 46899999999853
Done!