Your job contains 1 sequence.
>psy13546
MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV
CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNDWSWHMLPHNDC
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13546
(109 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034968 - symbol:RpL12 "Ribosomal protein L12" spe... 476 2.7e-45 1
UNIPROTKB|E1BTG1 - symbol:RPL12 "Uncharacterized protein"... 446 4.0e-42 1
ZFIN|ZDB-GENE-030131-5297 - symbol:rpl12 "ribosomal prote... 441 1.4e-41 1
UNIPROTKB|P61284 - symbol:RPL12 "60S ribosomal protein L1... 440 1.7e-41 1
UNIPROTKB|E2RR58 - symbol:RPL12 "60S ribosomal protein L1... 440 1.7e-41 1
UNIPROTKB|P30050 - symbol:RPL12 "60S ribosomal protein L1... 440 1.7e-41 1
UNIPROTKB|Q6QAS5 - symbol:RPL12 "60S ribosomal protein L1... 440 1.7e-41 1
RGD|1306318 - symbol:Rpl12-ps1 "ribosomal protein L12, ps... 440 1.7e-41 1
RGD|1565106 - symbol:Rpl12 "ribosomal protein L12" specie... 440 1.7e-41 1
RGD|1595128 - symbol:LOC685320 "similar to 60S ribosomal ... 440 1.7e-41 1
UNIPROTKB|P23358 - symbol:Rpl12 "60S ribosomal protein L1... 440 1.7e-41 1
UNIPROTKB|F1LWC2 - symbol:F1LWC2 "Uncharacterized protein... 430 2.0e-40 1
WB|WBGene00004424 - symbol:rpl-12 species:6239 "Caenorhab... 430 2.0e-40 1
UNIPROTKB|G3MZG7 - symbol:LOC783641 "Uncharacterized prot... 429 2.6e-40 1
UNIPROTKB|F1N3R2 - symbol:F1N3R2 "Uncharacterized protein... 421 1.8e-39 1
UNIPROTKB|F1MDX5 - symbol:F1MDX5 "Uncharacterized protein... 418 3.7e-39 1
ASPGD|ASPL0000053192 - symbol:AN0262 species:162425 "Emer... 411 2.1e-38 1
UNIPROTKB|F1PUJ6 - symbol:RPL12 "60S ribosomal protein L1... 408 4.3e-38 1
POMBASE|SPCC16C4.13c - symbol:rpl1201 "60S ribosomal prot... 398 4.9e-37 1
POMBASE|SPCC31H12.04c - symbol:rpl1202 "60S ribosomal pro... 398 4.9e-37 1
SGD|S000000780 - symbol:RPL12A "Ribosomal 60S subunit pro... 393 1.7e-36 1
SGD|S000002826 - symbol:RPL12B "Ribosomal 60S subunit pro... 393 1.7e-36 1
UNIPROTKB|I3LBL3 - symbol:LOC100523853 "Uncharacterized p... 389 4.4e-36 1
UNIPROTKB|F1M4N3 - symbol:LOC499782 "Protein LOC685320" s... 386 9.2e-36 1
CGD|CAL0006405 - symbol:RPL12 species:5476 "Candida albic... 384 1.5e-35 1
UNIPROTKB|I3LBH4 - symbol:LOC100156825 "Uncharacterized p... 378 6.5e-35 1
TAIR|locus:2061753 - symbol:AT2G37190 species:3702 "Arabi... 377 8.3e-35 1
TAIR|locus:2084036 - symbol:AT3G53430 species:3702 "Arabi... 377 8.3e-35 1
TAIR|locus:2175841 - symbol:AT5G60670 species:3702 "Arabi... 377 8.3e-35 1
RGD|1563956 - symbol:RGD1563956 "similar to 60S ribosomal... 369 5.8e-34 1
DICTYBASE|DDB_G0288295 - symbol:rpl12 "S60 ribosomal prot... 358 8.5e-33 1
UNIPROTKB|F1PJT3 - symbol:F1PJT3 "Uncharacterized protein... 356 1.4e-32 1
UNIPROTKB|F1S1A2 - symbol:F1S1A2 "Uncharacterized protein... 355 1.8e-32 1
UNIPROTKB|I3LFQ4 - symbol:I3LFQ4 "Uncharacterized protein... 351 4.7e-32 1
UNIPROTKB|J9NW89 - symbol:J9NW89 "Uncharacterized protein... 348 9.8e-32 1
UNIPROTKB|F1PHL1 - symbol:F1PHL1 "Uncharacterized protein... 338 1.1e-30 1
UNIPROTKB|F1MB63 - symbol:F1MB63 "Uncharacterized protein... 310 1.0e-27 1
UNIPROTKB|F1LY34 - symbol:F1LY34 "Uncharacterized protein... 299 1.5e-26 1
UNIPROTKB|F1PH72 - symbol:F1PH72 "Uncharacterized protein... 244 1.0e-20 1
UNIPROTKB|F1M2I2 - symbol:F1M2I2 "Uncharacterized protein... 222 2.2e-18 1
UNIPROTKB|J9NWC5 - symbol:PPHLN1 "Uncharacterized protein... 212 2.5e-17 1
>FB|FBgn0034968 [details] [associations]
symbol:RpL12 "Ribosomal protein L12" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:AE013599 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE GeneTree:ENSGT00390000006922
CTD:6136 ChiTaRS:RPL12 EMBL:AY071246 RefSeq:NP_524819.1
RefSeq:NP_726412.1 RefSeq:NP_726413.1 UniGene:Dm.7505 SMR:Q9W1B9
IntAct:Q9W1B9 MINT:MINT-312526 STRING:Q9W1B9
EnsemblMetazoa:FBtr0072174 EnsemblMetazoa:FBtr0072175
EnsemblMetazoa:FBtr0072176 GeneID:45329 KEGG:dme:Dmel_CG3195
UCSC:CG3195-RA FlyBase:FBgn0034968 InParanoid:Q9W1B9
OrthoDB:EOG4CC2HM GenomeRNAi:45329 NextBio:838036 Uniprot:Q9W1B9
Length = 165
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 93/97 (95%), Positives = 94/97 (96%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTEVK VYLRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT DWKGLKITV
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKK KN
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN 97
>UNIPROTKB|E1BTG1 [details] [associations]
symbol:RPL12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:PRSMARE
GeneTree:ENSGT00390000006922 EMBL:AADN02026932 IPI:IPI00574602
Ensembl:ENSGALT00000014314 Uniprot:E1BTG1
Length = 169
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 87/97 (89%), Positives = 91/97 (93%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTEVK VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPTEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>ZFIN|ZDB-GENE-030131-5297 [details] [associations]
symbol:rpl12 "ribosomal protein L12" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 ZFIN:ZDB-GENE-030131-5297 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 CTD:6136 HOVERGEN:HBG007231 EMBL:BC049061
IPI:IPI00509732 RefSeq:NP_963878.3 UniGene:Dr.75945
ProteinModelPortal:Q7ZUG1 SMR:Q7ZUG1 STRING:Q7ZUG1 GeneID:327089
KEGG:dre:327089 InParanoid:Q7ZUG1 NextBio:20809876
ArrayExpress:Q7ZUG1 Uniprot:Q7ZUG1
Length = 165
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 85/97 (87%), Positives = 91/97 (93%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K V++RC GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGPRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQAAI VVPSA++LIIKALKEPPRDRKKVKN
Sbjct: 61 KLTIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKN 97
>UNIPROTKB|P61284 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
UniGene:Bt.23981 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 EMBL:AY528249
EMBL:BC102693 EMBL:BC142032 IPI:IPI00700975 RefSeq:NP_991366.1
ProteinModelPortal:P61284 SMR:P61284 STRING:P61284 PRIDE:P61284
Ensembl:ENSBTAT00000009152 Ensembl:ENSBTAT00000009155 GeneID:404133
KEGG:bta:404133 CTD:6136 HOVERGEN:HBG007231 InParanoid:P61284
OrthoDB:EOG473PSB NextBio:20817570 ArrayExpress:P61284
Uniprot:P61284
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>UNIPROTKB|E2RR58 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 GeneTree:ENSGT00390000006922 CTD:6136
RefSeq:NP_001238885.1 UniGene:Cfa.39098 PDB:2ZKR PDBsum:2ZKR
ProteinModelPortal:E2RR58 SMR:E2RR58 PRIDE:E2RR58
Ensembl:ENSCAFT00000045165 GeneID:480716 KEGG:cfa:480716
EvolutionaryTrace:E2RR58 NextBio:20855696 Uniprot:E2RR58
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>UNIPROTKB|P30050 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471090
GO:GO:0003723 GO:GO:0003735 GO:GO:0006415 GO:GO:0006414
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 EMBL:AL445222
GO:GO:0019083 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:L06505 EMBL:BC050644 EMBL:BC059950
EMBL:BC094831 EMBL:BC105603 IPI:IPI00024933 IPI:IPI00816063
PIR:S35531 RefSeq:NP_000967.1 UniGene:Hs.408054
ProteinModelPortal:P30050 SMR:P30050 IntAct:P30050
MINT:MINT-2802291 STRING:P30050 PhosphoSite:P30050 DMDM:266921
SWISS-2DPAGE:P30050 PaxDb:P30050 PRIDE:P30050 DNASU:6136
Ensembl:ENST00000361436 Ensembl:ENST00000536368 GeneID:6136
KEGG:hsa:6136 UCSC:uc004bqy.2 UCSC:uc004bqz.2 GeneCards:GC09M130209
H-InvDB:HIX0170298 HGNC:HGNC:10302 HPA:HPA003403 MIM:180475
neXtProt:NX_P30050 PharmGKB:PA34665 InParanoid:P30050 ChiTaRS:RPL12
GenomeRNAi:6136 NextBio:23835 ArrayExpress:P30050 Bgee:P30050
CleanEx:HS_RPL12 Genevestigator:P30050 GermOnline:ENSG00000197958
Uniprot:P30050
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>UNIPROTKB|Q6QAS5 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 OMA:PRSMARE
GeneTree:ENSGT00390000006922 HOVERGEN:HBG007231 OrthoDB:EOG473PSB
EMBL:CU407118 EMBL:AY550045 UniGene:Ssc.17945 STRING:Q6QAS5
Ensembl:ENSSSCT00000006171 Uniprot:Q6QAS5
Length = 191
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 87 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 123
>RGD|1306318 [details] [associations]
symbol:Rpl12-ps1 "ribosomal protein L12, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1306318 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00210164 PRIDE:D3ZJE2
Ensembl:ENSRNOT00000003002 UCSC:RGD:1306318 OMA:ITDDINS
NextBio:641573 Uniprot:D3ZJE2
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>RGD|1565106 [details] [associations]
symbol:Rpl12 "ribosomal protein L12" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
GeneTree:ENSGT00390000006922 CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561 PIR:A36667
RefSeq:NP_001102668.1 UniGene:Rn.128979 UniGene:Rn.203094
UniGene:Rn.203151 ProteinModelPortal:P23358 SMR:P23358
IntAct:P23358 STRING:P23358 PRIDE:P23358 Ensembl:ENSRNOT00000042736
GeneID:499782 KEGG:rno:499782 UCSC:RGD:1565106 InParanoid:P23358
NextBio:703993 ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>RGD|1595128 [details] [associations]
symbol:LOC685320 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 RGD:1595128
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 IPI:IPI00779086
Ensembl:ENSRNOT00000021725 Uniprot:F8WFW0
Length = 191
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 87 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 123
>UNIPROTKB|P23358 [details] [associations]
symbol:Rpl12 "60S ribosomal protein L12" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 RGD:1565106 Pfam:PF03946 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 CTD:6136
HOVERGEN:HBG007231 OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561
PIR:A36667 RefSeq:NP_001102668.1 UniGene:Rn.128979
UniGene:Rn.203094 UniGene:Rn.203151 ProteinModelPortal:P23358
SMR:P23358 IntAct:P23358 STRING:P23358 PRIDE:P23358
Ensembl:ENSRNOT00000042736 GeneID:499782 KEGG:rno:499782
UCSC:RGD:1565106 InParanoid:P23358 NextBio:703993
ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>UNIPROTKB|F1LWC2 [details] [associations]
symbol:F1LWC2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 IPI:IPI00950092 Ensembl:ENSRNOT00000041683
Ensembl:ENSRNOT00000048189 Uniprot:F1LWC2
Length = 165
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 84/96 (87%), Positives = 88/96 (91%)
Query: 2 PPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVC 61
P KFDP E+K VYLRC GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 2 PTKFDPNEIKVVYLRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 62 LTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>WB|WBGene00004424 [details] [associations]
symbol:rpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0032940
GO:GO:0006412 GO:GO:0000003 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:Z82274 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 PIR:T23150
RefSeq:NP_001040960.1 RefSeq:NP_502542.1 ProteinModelPortal:P61866
SMR:P61866 DIP:DIP-26259N IntAct:P61866 MINT:MINT-1060363
STRING:P61866 PaxDb:P61866 PRIDE:P61866 EnsemblMetazoa:JC8.3a
GeneID:178279 KEGG:cel:CELE_JC8.3 UCSC:JC8.3a.2 CTD:178279
WormBase:JC8.3a WormBase:JC8.3c InParanoid:P61866 NextBio:900474
Uniprot:P61866
Length = 165
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 82/97 (84%), Positives = 89/97 (91%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTE+K VYLRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNR A I VVPSAASLI+K LKEPPRDRKKVKN
Sbjct: 61 KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKN 97
>UNIPROTKB|G3MZG7 [details] [associations]
symbol:LOC783641 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:TEILIRT
GeneTree:ENSGT00390000006922 EMBL:DAAA02048410
RefSeq:XP_003587427.1 Ensembl:ENSBTAT00000023331 GeneID:783641
KEGG:bta:783641 Uniprot:G3MZG7
Length = 165
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 83/97 (85%), Positives = 89/97 (91%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIG LGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGALGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK +N
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQRN 97
>UNIPROTKB|F1N3R2 [details] [associations]
symbol:F1N3R2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02007492
IPI:IPI00691456 Ensembl:ENSBTAT00000038959 Uniprot:F1N3R2
Length = 192
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 82/97 (84%), Positives = 87/97 (89%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ VYLRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 33 MPPKFDPNEINVVYLRCTSGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQ RQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 93 KLTIQYRQAQIQVVPSASALIIKALKEPPRDRKKQKN 129
>UNIPROTKB|F1MDX5 [details] [associations]
symbol:F1MDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:DAAA02019094 IPI:IPI00704351
Ensembl:ENSBTAT00000024473 OMA:EIVNIAW NextBio:20928163
Uniprot:F1MDX5
Length = 165
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 82/97 (84%), Positives = 86/97 (88%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPK DP E+K VYLRC GGEVGA S LAPKIGPLGLSPKKVGDDIAKATG WKGL+ITV
Sbjct: 1 MPPKLDPNEIKVVYLRCTGGEVGAMSVLAPKIGPLGLSPKKVGDDIAKATGGWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASTLIIKALKEPPRDRKKQKN 97
>ASPGD|ASPL0000053192 [details] [associations]
symbol:AN0262 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 OMA:PRSMARE EnsemblFungi:CADANIAT00002462
Uniprot:C8VUJ2
Length = 165
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 78/97 (80%), Positives = 88/97 (90%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK ++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK TGDWKGL++TV
Sbjct: 1 MPPKFDPNEVKIIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA +SVVPSA+SL+IKALKEPPRDRKK KN
Sbjct: 61 RLTIQNRQAQVSVVPSASSLVIKALKEPPRDRKKEKN 97
>UNIPROTKB|F1PUJ6 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03000628
Ensembl:ENSCAFT00000003405 OMA:FSIARTM Uniprot:F1PUJ6
Length = 165
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 81/97 (83%), Positives = 86/97 (88%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MP KFDP E+K VYLRC GGEVGATS+LA KI PLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPLKFDPNEIKVVYLRCTGGEVGATSALALKISPLGLSPKKVGDDIAKATSDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
>POMBASE|SPCC16C4.13c [details] [associations]
symbol:rpl1201 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPCC16C4.13c
PomBase:SPCC31H12.04c Pfam:PF03946 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0000027 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 76/97 (78%), Positives = 87/97 (89%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +++R VGGEV S+LAPKIGPLGLSPKKVG+DIAKAT DWKGL++TV
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQAA+SVVPSA++L+IKALKEP RDRKK KN
Sbjct: 61 KLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKN 97
>POMBASE|SPCC31H12.04c [details] [associations]
symbol:rpl1202 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
PomBase:SPCC16C4.13c PomBase:SPCC31H12.04c Pfam:PF03946
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 GO:GO:0022625
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 76/97 (78%), Positives = 87/97 (89%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +++R VGGEV S+LAPKIGPLGLSPKKVG+DIAKAT DWKGL++TV
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQAA+SVVPSA++L+IKALKEP RDRKK KN
Sbjct: 61 KLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKN 97
>SGD|S000000780 [details] [associations]
symbol:RPL12A "Ribosomal 60S subunit protein L12A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 SGD:S000000780
Pfam:PF03946 GO:GO:0003723 EMBL:BK006939 GO:GO:0003735
GO:GO:0002181 EMBL:U18795 GO:GO:0000027 PDB:3J16 PDBsum:3J16
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O5H PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O5H HOGENOM:HOG000082125 KO:K02870
EMBL:X51519 EMBL:AY693201 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 ProteinModelPortal:P0CX53
SMR:P0CX53 EnsemblFungi:YDR418W EnsemblFungi:YEL054C GeneID:852026
GeneID:852032 GeneID:856656 KEGG:sce:YDR418W KEGG:sce:YDR422C
KEGG:sce:YEL054C CYGD:YEL054c EvolutionaryTrace:P0CX53
NextBio:970252 ArrayExpress:P0CX53 GermOnline:YEL054C
Uniprot:P0CX53
Length = 165
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 77/97 (79%), Positives = 88/97 (90%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQNRQAA SVVPSA+SL+I ALKEPPRDRKK KN
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKN 97
>SGD|S000002826 [details] [associations]
symbol:RPL12B "Ribosomal 60S subunit protein L12B"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 SGD:S000002826 EMBL:U33007 Pfam:PF03946 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 GO:GO:0000027
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 EnsemblFungi:YDR418W
EnsemblFungi:YEL054C GeneID:852026 GeneID:852032 GeneID:856656
KEGG:sce:YDR418W KEGG:sce:YDR422C KEGG:sce:YEL054C NextBio:970252
EMBL:X51520 ProteinModelPortal:P0CX54 SMR:P0CX54 CYGD:YDR418w
GeneTree:ENSGT00390000006922 ArrayExpress:P0CX54 GermOnline:YDR418W
Uniprot:P0CX54
Length = 165
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 77/97 (79%), Positives = 88/97 (90%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQNRQAA SVVPSA+SL+I ALKEPPRDRKK KN
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKN 97
>UNIPROTKB|I3LBL3 [details] [associations]
symbol:LOC100523853 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:FP090889
Ensembl:ENSSSCT00000016160 Uniprot:I3LBL3
Length = 191
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 76/97 (78%), Positives = 83/97 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K +YLRC GGE GA S+LAPKIGP GLSPKKVGDDI KATGDWKGL+ITV
Sbjct: 27 MPPKFDPKEIKVMYLRCTGGEGGAPSALAPKIGPPGLSPKKVGDDITKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTI NRQA + VVPS ++LIIKALKE PRDRKK KN
Sbjct: 87 KLTIPNRQAQMEVVPSGSALIIKALKELPRDRKKQKN 123
>UNIPROTKB|F1M4N3 [details] [associations]
symbol:LOC499782 "Protein LOC685320" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 SMART:SM00649
RGD:1595128 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF54747 IPI:IPI00948765 Ensembl:ENSRNOT00000064675
ArrayExpress:F1M4N3 Uniprot:F1M4N3
Length = 189
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 76/85 (89%), Positives = 80/85 (94%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV LTIQNRQA I
Sbjct: 104 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 163
Query: 73 VVPSAASLIIKALKEPPRDRKKVKN 97
VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 164 VVPSASALIIKALKEPPRDRKKQKN 188
>CGD|CAL0006405 [details] [associations]
symbol:RPL12 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 CGD:CAL0006405
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0080
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
HOGENOM:HOG000082125 KO:K02870 RefSeq:XP_721592.1
RefSeq:XP_721712.1 ProteinModelPortal:Q5AJF7 SMR:Q5AJF7
STRING:Q5AJF7 GeneID:3636659 GeneID:3636787 KEGG:cal:CaO19.1635
KEGG:cal:CaO19.9203 Uniprot:Q5AJF7
Length = 165
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 76/97 (78%), Positives = 86/97 (88%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+S+LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKFLYLRAVGGEVGASSALAPKIGPLGLSPKKVGEDIAKATKEYKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQNRQA SVVPSA+SL+I ALKEP RDRKK KN
Sbjct: 61 QLRIQNRQATASVVPSASSLVITALKEPVRDRKKEKN 97
>UNIPROTKB|I3LBH4 [details] [associations]
symbol:LOC100156825 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:CU326405
Ensembl:ENSSSCT00000010794 Uniprot:I3LBH4
Length = 191
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 73/97 (75%), Positives = 83/97 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKF+P E+K +YLRC GE+ A S+LAPKIGPLGLSPK+VGDDIAKA GDWKGL+ITV
Sbjct: 27 MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
TIQNRQA + VVPSA++LIIKA KE PRDRKK KN
Sbjct: 87 KPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKN 123
>TAIR|locus:2061753 [details] [associations]
symbol:AT2G37190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005773
"vacuole" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0009506 GO:GO:0009507 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
GO:GO:0009409 GO:GO:0008270 GO:GO:0003735 GO:GO:0019843
EMBL:AC006260 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 EMBL:AF372896 EMBL:BT002673
EMBL:AY086293 EMBL:Z17756 IPI:IPI00516681 PIR:F84789
RefSeq:NP_181256.1 UniGene:At.25014 ProteinModelPortal:P50883
SMR:P50883 IntAct:P50883 STRING:P50883 PaxDb:P50883 PRIDE:P50883
ProMEX:P50883 EnsemblPlants:AT2G37190.1 GeneID:818295
KEGG:ath:AT2G37190 TAIR:At2g37190 HOGENOM:HOG000082125
InParanoid:P50883 KO:K02870 OMA:PRSMARE ProtClustDB:PLN03072
Genevestigator:P50883 GermOnline:AT2G37190 Uniprot:P50883
Length = 166
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 71/98 (72%), Positives = 86/98 (87%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKN 98
>TAIR|locus:2084036 [details] [associations]
symbol:AT3G53430 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
GO:GO:0006412 EMBL:AL132966 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 ProtClustDB:PLN03072
EMBL:AY140102 EMBL:BT002590 IPI:IPI00532442 PIR:T45883
RefSeq:NP_190911.1 UniGene:At.22805 UniGene:At.68911
ProteinModelPortal:Q9LFH5 SMR:Q9LFH5 IntAct:Q9LFH5 STRING:Q9LFH5
PaxDb:Q9LFH5 PRIDE:Q9LFH5 EnsemblPlants:AT3G53430.1 GeneID:824511
KEGG:ath:AT3G53430 GeneFarm:223 TAIR:At3g53430 InParanoid:Q9LFH5
OMA:TAEFNGM Genevestigator:Q9LFH5 GermOnline:AT3G53430
Uniprot:Q9LFH5
Length = 166
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 71/98 (72%), Positives = 86/98 (87%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKN 98
>TAIR|locus:2175841 [details] [associations]
symbol:AT5G60670 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 EMBL:AB005246
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
ProtClustDB:PLN03072 EMBL:AY039614 EMBL:AY078025 EMBL:AY088164
IPI:IPI00540499 RefSeq:NP_200875.1 UniGene:At.22910
ProteinModelPortal:Q9FF52 SMR:Q9FF52 STRING:Q9FF52 PRIDE:Q9FF52
EnsemblPlants:AT5G60670.1 GeneID:836188 KEGG:ath:AT5G60670
GeneFarm:222 TAIR:At5g60670 InParanoid:Q9FF52 OMA:TEILIRT
Genevestigator:Q9FF52 GermOnline:AT5G60670 Uniprot:Q9FF52
Length = 166
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 71/98 (72%), Positives = 86/98 (87%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKN 98
>RGD|1563956 [details] [associations]
symbol:RGD1563956 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1563956 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00362058 PRIDE:D4A8N3
Ensembl:ENSRNOT00000030686 NextBio:652136 Uniprot:D4A8N3
Length = 157
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 74/91 (81%), Positives = 79/91 (86%)
Query: 7 PTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN 66
P E+K VYLRC EV ATS+LAPKIGPL LSPKKVGDDIAK TGDWKGL+ITV LTIQN
Sbjct: 3 PNEIKVVYLRCTRDEVRATSALAPKIGPLRLSPKKVGDDIAKTTGDWKGLRITVKLTIQN 62
Query: 67 RQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
RQA I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 63 RQAQIEVVPSASALIIKALKEPPRDRKKQKN 93
>DICTYBASE|DDB_G0288295 [details] [associations]
symbol:rpl12 "S60 ribosomal protein L12"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000911
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
dictyBase:DDB_G0288295 Pfam:PF03946 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000109 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE
RefSeq:XP_636797.1 HSSP:P35979 ProteinModelPortal:Q54J50 SMR:Q54J50
STRING:Q54J50 PRIDE:Q54J50 EnsemblProtists:DDB0229950
GeneID:8626554 KEGG:ddi:DDB_G0288295 ProtClustDB:PTZ00105
Uniprot:Q54J50
Length = 166
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 69/97 (71%), Positives = 82/97 (84%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPK DP+E +V+LR GGE GA S+LAPK+GPLG+SPKKVGDDIAKAT WKG+K++V
Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNR A V+PSA++L+IKALKEPPRDRKK KN
Sbjct: 61 KLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKN 97
>UNIPROTKB|F1PJT3 [details] [associations]
symbol:F1PJT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:AAEX03010427
Ensembl:ENSCAFT00000010621 OMA:NISSKRH Uniprot:F1PJT3
Length = 194
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 74/97 (76%), Positives = 83/97 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PPKFDP E+K VYLRC GGEVGATS PKIGPLGLSPKKVGDD+AKAT +WK L+ITV
Sbjct: 34 LPPKFDP-EIKVVYLRCTGGEVGATS---PKIGPLGLSPKKVGDDMAKATSNWKDLRITV 89
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VVPSA++LII+ALK PPRD K+ KN
Sbjct: 90 KLTIQNRQAQIEVVPSASALIIEALKGPPRDLKQ-KN 125
>UNIPROTKB|F1S1A2 [details] [associations]
symbol:F1S1A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
EMBL:CU929934 Ensembl:ENSSSCT00000019265 Uniprot:F1S1A2
Length = 158
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 71/97 (73%), Positives = 81/97 (83%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
M PKFDP ++K +YLRC GGE GA S+LAP IGPLGLSPKKVGDD+AKATGD KGL+I V
Sbjct: 1 MQPKFDPNKIKVIYLRCTGGEDGAPSALAPTIGPLGLSPKKVGDDVAKATGDCKGLRIIV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
LTIQNRQA I VV SA++L IKALKE PR+RK+ KN
Sbjct: 61 KLTIQNRQAQIEVVASASALPIKALKELPRERKQQKN 97
>UNIPROTKB|I3LFQ4 [details] [associations]
symbol:I3LFQ4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSSSCT00000029393 OMA:GCRINGK
Uniprot:I3LFQ4
Length = 167
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 71/98 (72%), Positives = 78/98 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLK-IT 59
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKA G WKG +
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAXG-WKGFATLG 59
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
+ + I VVPSA++LIIKALKEPPRDRKK KN
Sbjct: 60 KSYNVSLQVVQIEVVPSASALIIKALKEPPRDRKKQKN 97
>UNIPROTKB|J9NW89 [details] [associations]
symbol:J9NW89 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000021487
Uniprot:J9NW89
Length = 171
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 70/97 (72%), Positives = 79/97 (81%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ ++LRC GGEVGA S+LA KI P GLSPKKVG DI K G WKGL+ITV
Sbjct: 12 MPPKFDPNEINVMFLRCTGGEVGAMSALALKIDP-GLSPKKVGYDIVKTGGYWKGLRITV 70
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQNRQA I V+PSA++LIIKALKEPPRDRK+ KN
Sbjct: 71 KLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKN 107
>UNIPROTKB|F1PHL1 [details] [associations]
symbol:F1PHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000016097
Uniprot:F1PHL1
Length = 160
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 68/97 (70%), Positives = 77/97 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ ++LRC GEV A S+LA KI P GLSPKKVG DI K G WKGL+ITV
Sbjct: 1 MPPKFDPNEINVMFLRCTSGEVSAMSALALKIDP-GLSPKKVGYDIVKTAGYWKGLRITV 59
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQNRQA I V+PSA++LIIKALKEPPRDRK+ KN
Sbjct: 60 KLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKN 96
>UNIPROTKB|F1MB63 [details] [associations]
symbol:F1MB63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02033567
IPI:IPI00906805 Ensembl:ENSBTAT00000014127 Uniprot:F1MB63
Length = 163
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/94 (62%), Positives = 72/94 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PP + EVK VYL C GGEVG S+L PKIGPLGL PK+V D KATGDWKGL+I +
Sbjct: 1 LPPGYHLNEVKVVYLWCTGGEVGVVSALLPKIGPLGLFPKEVDGDTTKATGDWKGLRIKM 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKK 94
+T QNRQA V+PSA++LI+KALKEPPR ++K
Sbjct: 61 KMTTQNRQAKAEVIPSASALILKALKEPPRQKQK 94
>UNIPROTKB|F1LY34 [details] [associations]
symbol:F1LY34 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 IPI:IPI00950870
Ensembl:ENSRNOT00000066710 Uniprot:F1LY34
Length = 171
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 64/97 (65%), Positives = 74/97 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
M PKF P+E+K + C GGEVG S+LA KIGP+ KKVGDD AKAT DWKGL++TV
Sbjct: 15 MLPKFKPSEIK---VMCTGGEVGVISTLALKIGPI----KKVGDDFAKATADWKGLRVTV 67
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKN 97
L IQ RQ I VVPSA++LI+KALKEPPRDRKK KN
Sbjct: 68 KLAIQ-RQVQIEVVPSASALIVKALKEPPRDRKKKKN 103
>UNIPROTKB|F1PH72 [details] [associations]
symbol:F1PH72 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03003112
Ensembl:ENSCAFT00000004329 Uniprot:F1PH72
Length = 158
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/97 (58%), Positives = 69/97 (71%)
Query: 1 MPPKFDPTEVKKVYLRCVGG-EVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKIT 59
M PKFDP ++K +YL C+GG EV TS L KI PL LSPKK GDDI KATG K L IT
Sbjct: 1 MLPKFDP-KIKVIYLWCIGGGEVCNTSVLVQKIRPLDLSPKKAGDDITKATGGLKFLGIT 59
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVK 96
V LTIQN QA + VVPSA++LII+A P R+ +++
Sbjct: 60 VKLTIQNTQAQLEVVPSASALIIRA---PTRNHLEIE 93
>UNIPROTKB|F1M2I2 [details] [associations]
symbol:F1M2I2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 IPI:IPI00387938
Ensembl:ENSRNOT00000033403 Uniprot:F1M2I2
Length = 160
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 55/91 (60%), Positives = 64/91 (70%)
Query: 4 KFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLT 63
K DP ++K ++LRC GG ATS+L PKIGP GLSPKK KATGDWKGL +TV LT
Sbjct: 30 KADP-KIKAMHLRCTGGR--ATSAL-PKIGPPGLSPKK------KATGDWKGLMVTVKLT 79
Query: 64 IQNRQAAISVVPSAASLIIKALKEPPRDRKK 94
IQNRQA VVPSA +L +K L RDR+K
Sbjct: 80 IQNRQAQPEVVPSAPALALKEL----RDRRK 106
>UNIPROTKB|J9NWC5 [details] [associations]
symbol:PPHLN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 EMBL:AAEX03015128 GeneTree:ENSGT00390000016228
EMBL:AAEX03015129 Ensembl:ENSCAFT00000046129 Uniprot:J9NWC5
Length = 167
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 51/99 (51%), Positives = 64/99 (64%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PP+ P+E K VYLRC GEV A S L PKIG L SP +V DD+AKAT D
Sbjct: 17 IPPRSHPSETKIVYLRCTHGEVSALSVLVPKIGLLSPSPIEVADDLAKATDD-------- 68
Query: 61 CL-TIQNRQAAIS-VVPSAASLIIKALKEPPRDRKKVKN 97
C+ T + Q ++ VV SA++LI++ LKEPPRD KK KN
Sbjct: 69 CVVTDHSEQTSLDEVVFSASALIVRVLKEPPRDWKKQKN 107
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 109 109 0.00091 102 3 11 22 0.49 30
29 0.41 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 563 (60 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.74u 0.09s 12.83t Elapsed: 00:00:01
Total cpu time: 12.74u 0.09s 12.83t Elapsed: 00:00:01
Start: Thu Aug 15 14:13:18 2013 End: Thu Aug 15 14:13:19 2013