BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13547
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61866|RL12_CAEEL 60S ribosomal protein L12 OS=Caenorhabditis elegans GN=rpl-12 PE=3
SV=1
Length = 165
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/165 (75%), Positives = 143/165 (86%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTE+K VYLRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNR A I VVPSAASLI+K LKEPPRDRKKVKNVKHNG++ +D I I+R MRPRS
Sbjct: 61 KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
MA+K GTVKE+LGT QSVG T++G+ DIIE+I NGEIE+P +
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIPAQ 165
>sp|P61865|RL12_CAEBR 60S ribosomal protein L12 OS=Caenorhabditis briggsae GN=rpl-12 PE=3
SV=1
Length = 165
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/165 (75%), Positives = 143/165 (86%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTE+K VYLRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNR A I VVPSAASLI+K LKEPPRDRKKVKNVKHNG++ +D I I+R MRPRS
Sbjct: 61 KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
MA+K GTVKE+LGT QSVG T++G+ DIIE+I NGEIE+P +
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIPAQ 165
>sp|P23358|RL12_RAT 60S ribosomal protein L12 OS=Rattus norvegicus GN=Rpl12 PE=2 SV=1
Length = 165
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/163 (75%), Positives = 140/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KHNGN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P35979|RL12_MOUSE 60S ribosomal protein L12 OS=Mus musculus GN=Rpl12 PE=1 SV=2
Length = 165
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/163 (75%), Positives = 140/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KH+GN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P30050|RL12_HUMAN 60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1
Length = 165
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 140/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KH+GN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|E2RR58|RL12_CANFA 60S ribosomal protein L12 OS=Canis familiaris GN=RPL12 PE=1 SV=1
Length = 165
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 140/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KH+GN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P61284|RL12_BOVIN 60S ribosomal protein L12 OS=Bos taurus GN=RPL12 PE=2 SV=1
Length = 165
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 140/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KH+GN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|Q6QMZ7|RL12_CHILA 60S ribosomal protein L12 OS=Chinchilla lanigera GN=RPL12 PE=2 SV=1
Length = 165
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 139/163 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDRKK KN+KH+GN+ DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+ R DII+ I+NG +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVECP 163
>sp|O75000|RL12_SCHPO 60S ribosomal protein L12 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1201 PE=1 SV=1
Length = 165
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 141/165 (85%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +++R VGGEV S+LAPKIGPLGLSPKKVG+DIAKAT DWKGL++TV
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQAA+SVVPSA++L+IKALKEP RDRKK KNV H+GNV +DEI ++RTMR +S
Sbjct: 61 KLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+A++ GTVKE+LGT SVG TV+G++ D+ + IDNGEIE+P+E
Sbjct: 121 LAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165
>sp|Q9C285|RL12_NEUCR 60S ribosomal protein L12 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-12
PE=3 SV=1
Length = 165
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/165 (69%), Positives = 139/165 (84%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK + LR GGEVGA+S+LAPKIGPLGLSPKKVG+DIAKATGDWKGL++TV
Sbjct: 1 MPPKFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATGDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNRQAA+SVVP+A++L+I+ALKEPPRDRKK KN+KHN +V DEI I+RTMR +S
Sbjct: 61 KLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+++ GTV EVLGT SVG V+G+S + + EAI GEI+VPEE
Sbjct: 121 FSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVPEE 165
>sp|P50883|RL121_ARATH 60S ribosomal protein L12-1 OS=Arabidopsis thaliana GN=RPL12A PE=1
SV=2
Length = 166
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 139/165 (84%), Gaps = 1/165 (0%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN+KHNGN+ D++ I+R MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
S+A++ GTV+E+LGTC SVG TV+G+ +DI + I +GE+E+PE
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPE 165
>sp|P0CX54|RL12B_YEAST 60S ribosomal protein L12-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL12B PE=1 SV=1
Length = 165
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 134/164 (81%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
L IQNRQAA SVVPSA+SL+I ALKEPPRDRKK KNVKH+GN+ +DEI I+R MR +S
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
R KE+LGT QSVG V+ ++ DIIE I+ GEIE+PE
Sbjct: 121 FGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIPE 164
>sp|P0CX53|RL12A_YEAST 60S ribosomal protein L12-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL12A PE=1 SV=1
Length = 165
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 134/164 (81%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
L IQNRQAA SVVPSA+SL+I ALKEPPRDRKK KNVKH+GN+ +DEI I+R MR +S
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
R KE+LGT QSVG V+ ++ DIIE I+ GEIE+PE
Sbjct: 121 FGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIPE 164
>sp|Q9LFH5|RL122_ARATH 60S ribosomal protein L12-2 OS=Arabidopsis thaliana GN=RPL12B PE=1
SV=1
Length = 166
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 138/165 (83%), Gaps = 1/165 (0%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN+KHNGN+ D++ I+R MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
S+A++ GTV+E+LGTC SVG TV+G+ +D+ + I GEIE+PE
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPE 165
>sp|Q9FF52|RL123_ARATH 60S ribosomal protein L12-3 OS=Arabidopsis thaliana GN=RPL12C PE=2
SV=1
Length = 166
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 140/166 (84%), Gaps = 1/166 (0%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKKVKN+KHNGN+ D++ I++ MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
S+A++ GTVKE+LGTC SVG TV+G+ +D+ E I++G+I++P E
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166
>sp|O50003|RL12_PRUAR 60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1
Length = 166
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 137/164 (83%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPKFDP++V VY+R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKGL++T
Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPR 119
V LT+QNRQA +SVVPSAA+L+IKALKEP RDRKK KN+KH+G++ +D++ I++ M+ R
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
SMA++ GTVKE+L TC SVG TV+G+ +D+ + I +G++E+P
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIP 164
>sp|Q54J50|RL12_DICDI 60S ribosomal protein L12 OS=Dictyostelium discoideum GN=rpl12 PE=1
SV=1
Length = 166
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 131/164 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPK DP+E +V+LR GGE GA S+LAPK+GPLG+SPKKVGDDIAKAT WKG+K++V
Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS 120
LTIQNR A V+PSA++L+IKALKEPPRDRKK KN+KHNGN+P++EI I++TMR +S
Sbjct: 61 KLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
+A F G+V E+LGT SVG V G+S RDI I +GEIEV E
Sbjct: 121 LAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEVVE 164
>sp|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment) OS=Chlamydomonas reinhardtii
GN=RPL12 PE=2 SV=1
Length = 157
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 10 VKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-GDWKGLKITVCLTIQNRQ 68
V +V +R GGEVG SSLAPKIGPLGLSPKK+G+DIAK T DWKGL+ITV LT+QNRQ
Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60
Query: 69 AAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGT 128
A ISV+PSAA+L+IKALKEP RDRKK KN+KH G+V + +I I+R MRPRS A+
Sbjct: 61 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 120
Query: 129 VKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
KE+LGT SVG V+G+ RD+I AID+G IE+P+
Sbjct: 121 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIPD 156
>sp|Q8SR84|RL12_ENCCU 60S ribosomal protein L12 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL12 PE=1 SV=1
Length = 166
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 119/163 (73%), Gaps = 5/163 (3%)
Query: 5 FDPTEVKKVYLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLT 63
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT D+K LK+ V L
Sbjct: 7 MDP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLA 63
Query: 64 IQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMR-PRSMA 122
I++R+A + V PS A+LIIK+LKEPPRDRKK KN+ HNG++ + E+ +I+R R RS +
Sbjct: 64 IKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYS 123
Query: 123 RKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
GTVKEVLGTC+S+G V+G+ +++ ID GEI++P++
Sbjct: 124 NSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPDQ 166
>sp|O29712|RL11_ARCFU 50S ribosomal protein L11P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl11p PE=3 SV=1
Length = 157
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Query: 10 VKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN-RQ 68
V+ V + GG+ L P IGPLGL+ K+V D I +AT D++GL + V + +++ R
Sbjct: 2 VQVVEVLVPGGQASPGPPLGPAIGPLGLNVKQVVDKINEATKDYEGLSVPVKIIVKDDRS 61
Query: 69 AAISV-VPSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKF 125
I V +P ++LI + L K N GN+ ++++ NI+R R +S++
Sbjct: 62 FEIEVGIPPVSALIKRELG----IEKGASNPGREVVGNLTMEQLLNIARIKRQQSLSYTL 117
Query: 126 VGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
VKEVLGTC S+G TVEG+S +++ I+ G++E+PEE
Sbjct: 118 KEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVEIPEE 157
>sp|A3CSJ5|RL11_METMJ 50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1
Length = 158
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI---QNRQAAISVVP 75
GG+ A L P +GPLG++ K V DDI K T ++ G+++ V +T+ +N + + P
Sbjct: 11 GGKATAGPPLGPALGPLGINVKAVVDDINKKTAEFNGMQVPVTVTVDDKKNFTIEVGIPP 70
Query: 76 SAASL-----IIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVK 130
+ A + I K EP G++P++ I+R ++ VK
Sbjct: 71 TTALVMKEAGITKGSTEP--------GALVAGDLPLEAAVRIARMKFDGMLSYDLKSAVK 122
Query: 131 EVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
EVLGTC SVG TVEG+ R++I+A++NGE +
Sbjct: 123 EVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
>sp|A2STU0|RL11_METLZ 50S ribosomal protein L11P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rpl11p PE=3 SV=1
Length = 157
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQ-AAISV-VPS 76
GG A L P +GPLG++ K V DDI K T ++ G+ + V + + +++ ++V +P
Sbjct: 11 GGRATAGPPLGPALGPLGINVKAVVDDINKKTAEFNGMSVPVTVMVDDKKNVTLTVGIPP 70
Query: 77 AASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLGTC 136
+L++K + N + GN+P++ + I++ ++ KEV+GTC
Sbjct: 71 TTALVMK--EAGVEKGSGTPNTQAVGNLPLEAVIRIAKMKMESMLSYDLKTAAKEVMGTC 128
Query: 137 QSVGATVEGRSARDIIEAIDNGE 159
SVG TVEG++A+ I A++ GE
Sbjct: 129 VSVGVTVEGKTAKQAIAAVNAGE 151
>sp|Q8TZK0|RL11_PYRFU 50S ribosomal protein L11P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl11p PE=1 SV=1
Length = 164
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 7 PTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQ- 65
P +V +V + GG+ L P IGPLGL+ K+V D I +AT D+ G+++ V + +
Sbjct: 2 PKQVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKINEATKDFAGMQVPVKIIVDP 59
Query: 66 -NRQAAISV-VPSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSM 121
+Q I V VP + LI K L K KHN GN+ ++++ I++ + + +
Sbjct: 60 VTKQFEIEVGVPPTSQLIKKEL----GLEKGSGEPKHNIVGNLTMEQVIKIAKMKKDQML 115
Query: 122 ARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNG 158
A KEV+GT S+G TVEG+ R++ + ID G
Sbjct: 116 ALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
>sp|Q9V2S3|RL11_PYRAB 50S ribosomal protein L11P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl11p PE=3 SV=1
Length = 164
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQ--NRQAAISV-VP 75
GG+ L P IGPLGL+ K+V D I +AT ++ G+++ V + + +Q I V VP
Sbjct: 12 GGKATPGPPLGPAIGPLGLNVKQVVDKINEATKEFAGMQVPVKIIVDPVTKQFEIEVGVP 71
Query: 76 SAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEVL 133
+ LI K L K KHN GN+ ++++ I++ R + +A KEV+
Sbjct: 72 PTSQLIKKEL----GLEKGSGEPKHNIVGNLTMEQVIKIAKMKRNQMLALTLKAAAKEVI 127
Query: 134 GTCQSVGATVEGRSARDIIEAIDNG 158
GT S+G TVEG+ R++ ID G
Sbjct: 128 GTALSMGVTVEGKDPREVQREIDEG 152
>sp|P35025|RL11_SULAC 50S ribosomal protein L11P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl11p PE=1 SV=3
Length = 170
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 15/160 (9%)
Query: 7 PTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN 66
PT+ K+ + GG L P + LGL+ ++V I T +KG+ + V + I +
Sbjct: 2 PTKTIKIMVE--GGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDS 59
Query: 67 RQAAISV---VPSAASLIIKAL--KEPPRD--RKKVKNVKHNGNVPIDEIYNISRTMRPR 119
+ VP+ SL++KA+ +EP D KK+ GN+ +++I +I+ +P+
Sbjct: 60 STKKYDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI------GNLDLEQIADIAIKKKPQ 113
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGE 159
A+ +K +LGT +S+G TVEG+ +D+I+ ID G+
Sbjct: 114 LSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQGK 153
>sp|O57779|RL11_PYRHO 50S ribosomal protein L11P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl11p PE=3 SV=1
Length = 164
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQ--NRQAAISV-VP 75
GG+ L P IGPLGL+ K+V D I +AT ++ G+++ V + + +Q I V VP
Sbjct: 12 GGKATPGPPLGPAIGPLGLNVKQVVDKINEATKEFAGMQVPVKIIVDPVTKQFEIEVGVP 71
Query: 76 SAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEVL 133
+ LI K L K KHN GN+ ++++ I++ R + +A KEV+
Sbjct: 72 PTSQLIKKEL----GLEKGSGEPKHNIVGNLTMEQVIKIAKMKRSQMLALTLKAAAKEVI 127
Query: 134 GTCQSVGATVEGRSARDIIEAIDNG 158
GT S+G TVEG+ R + ID G
Sbjct: 128 GTALSMGVTVEGKDPRIVQREIDEG 152
>sp|B8GIY2|RL11_METPE 50S ribosomal protein L11P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1
Length = 158
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 16/151 (10%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQ-AAISV-VPS 76
GG A + P +GPLG++ K V DDI K T ++ G+++ V + + +++ ISV +P
Sbjct: 11 GGRATAGPPIGPALGPLGINVKAVVDDINKKTAEFNGMQVPVKIEVDDKKNVTISVGIPP 70
Query: 77 AASLIIKAL------KEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVK 130
+L++K + EP N G++PI+ I+R ++ + VK
Sbjct: 71 TTALVMKEVGIEKGSAEP--------NSIIVGDLPIEAAVRIARMKLDDMLSYELKTAVK 122
Query: 131 EVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
EV+GTC SVG TV+G+ ++I+ AI G+ +
Sbjct: 123 EVIGTCVSVGVTVDGKKPKEILAAISAGQYD 153
>sp|Q46EU7|RL11_METBF 50S ribosomal protein L11P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl11p PE=3 SV=1
Length = 161
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQ-AAISV-VPS 76
GG+ L P +GPLG++ K+V + I + T D+ G+++ V + + +++ I V P
Sbjct: 11 GGKANPGPPLGPALGPLGVNIKEVVEKINEKTRDYNGMQVPVKVIVDDKKNVEIEVGTPP 70
Query: 77 AASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
ASLI+K L +K N GN+ I ++ I+R + ++ T+KEV+G
Sbjct: 71 TASLIMKELG----IQKGSGNAGSEVVGNISISQVAKIARMKKEDVLSYDLKATMKEVMG 126
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIE 161
TC +G TVEG ARD +A+D G+ +
Sbjct: 127 TCVPMGVTVEGVEARDSQKALDQGKFD 153
>sp|Q5JH34|RL11_PYRKO 50S ribosomal protein L11P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl11p PE=3 SV=1
Length = 165
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN---RQAAISV-V 74
GG+ L P IGPLGL+ K+V D+I KAT +++G+++ V + +++ + I V +
Sbjct: 11 GGKASPGPPLGPAIGPLGLNVKQVVDEINKATKEFEGMQVPVKIIVEDPKKKTFRIEVGI 70
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEV 132
P + LI K L P K H GN+ ++++ I++ + +A KEV
Sbjct: 71 PPTSQLIKKELGIP----KGSSEAGHTPAGNLTMEQVIKIAKMKIDQMLAPNLKAAAKEV 126
Query: 133 LGTCQSVGATVEGRSARDIIEAIDNG 158
+GT S+G TVEG+ R++ ID G
Sbjct: 127 IGTALSMGVTVEGKDPREVQREIDEG 152
>sp|C5A426|RL11_THEGJ 50S ribosomal protein L11P OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl11p PE=3 SV=1
Length = 165
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN---RQAAISV-V 74
GG+ L P IGPLGL+ K+V D+I KAT +++G+++ V + +++ + I V +
Sbjct: 11 GGKASPGPPLGPAIGPLGLNVKQVVDEINKATKEFEGMQVPVKIIVEDPKKKTFRIEVGI 70
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
P + LI K L P + V + GN+ ++++ I++ + +A KEV+G
Sbjct: 71 PPTSQLIKKELGIPKGSSEPVHS--PVGNLTMEQVIKIAKMKIDQMLAPTLKAASKEVIG 128
Query: 135 TCQSVGATVEGRSARDIIEAIDNG 158
T S+G TVEG+ R++ ID G
Sbjct: 129 TALSMGVTVEGKDPREVQREIDEG 152
>sp|Q2FQ31|RL11_METHJ 50S ribosomal protein L11P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl11p PE=3 SV=1
Length = 158
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI-QNRQAAISV-VPS 76
GG+ A L P +GPLG++ K V D+I K T + G+++ V + + + + ISV +P
Sbjct: 11 GGKATAGPPLGPALGPLGINVKAVVDEINKKTASFNGMQVPVRVEVDEKKNFTISVGIPP 70
Query: 77 AASLIIKALKEPPRDRKKVK-NVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLGT 135
+LI +KE ++ + N K G+VP++ I++ ++ VKEV+GT
Sbjct: 71 TTALI---MKEAGVEKGSGEPNTKIVGDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGT 127
Query: 136 CQSVGATVEGRSARDIIEAIDNG 158
C S+G TV G+ +D+++ ID+G
Sbjct: 128 CVSLGITVSGKKPKDMLKEIDSG 150
>sp|A6UQ78|RL11_METVS 50S ribosomal protein L11P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl11p PE=3 SV=1
Length = 159
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
V + GG+ A L P IGPLG++ +V I T D++G+ + V + ++ +
Sbjct: 6 VEILVTGGKATAGPPLGPAIGPLGVNIMQVVQMINTKTKDYEGMSVPVKVIVETTKRTFE 65
Query: 73 V---VPSAASLIIKAL------KEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMAR 123
V +P A++LI K L +EP K GN+ +++I I++ + +A
Sbjct: 66 VEVGIPPASALIKKELGLESGSQEPKH--------KVAGNITMEKIVKIAKMKQDAMLAY 117
Query: 124 KFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
KEV+GTC SVG VEG++ ++ +A+D GE +
Sbjct: 118 TLKSAAKEVIGTCVSVGVNVEGKTPKEAQKAVDAGEFD 155
>sp|P54030|RL11_METJA 50S ribosomal protein L11P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl11p PE=3 SV=1
Length = 161
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI--QNRQAA 70
V + GG A L P IGPLG++ +V +I + T D++G+++ V + + + R+
Sbjct: 6 VEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRKFE 65
Query: 71 ISV-VPSAASLIIKALKEPPRDRKKVKNVKHN------GNVPIDEIYNISRTMRPRSMAR 123
I V +P +LI K L ++ H GN+ ++++ I++ + ++
Sbjct: 66 IEVGIPPTTALIKKELG--------IETAAHEPRHEVVGNLTLEQVIKIAKMKKDAMLSY 117
Query: 124 KFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNG 158
VKEVLGTC S+G TVEG+ +++ + ID G
Sbjct: 118 TLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
>sp|Q97BN1|RL11_THEVO 50S ribosomal protein L11P OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl11p PE=3 SV=1
Length = 158
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI---QNRQAAISV-V 74
GG+ + P +GPLGL+ +V +I + T +++G+++ V +T+ + ++ I+V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
P ++L+ K L KK + V GN +++I N++ P +A+ V EVLG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAV--AGNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
TC ++G VEG+ +++ + I +G+I++ +
Sbjct: 129 TCVAMGINVEGKDPKEVQKLIKSGQIKIEQ 158
>sp|B6YSX7|RL11_THEON 50S ribosomal protein L11P OS=Thermococcus onnurineus (strain NA1)
GN=rpl11p PE=3 SV=1
Length = 163
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN---RQAAISV-V 74
GG+ L P IGPLGL+ K+V D+I KAT D++G+++ V + +++ + I V V
Sbjct: 11 GGKASPGPPLGPAIGPLGLNVKQVVDEINKATKDFEGMQVPVKIIVEDPKKKTFRIEVGV 70
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEV 132
P + LI K L P K H+ GN+ ++++ I++ + +A KEV
Sbjct: 71 PPVSQLIKKELGIP----KGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEV 126
Query: 133 LGTCQSVGATVEGRSARDIIEAIDNG 158
+GT S+G TVEG+ R++ + ID G
Sbjct: 127 IGTALSMGVTVEGKDPREVQKEIDEG 152
>sp|Q6L1Y0|RL11_PICTO 50S ribosomal protein L11P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl11p
PE=3 SV=1
Length = 155
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI----QNRQAAISVV 74
GG+ L P +GPLGL+ +V DI + T ++ G+++ V + + + I V
Sbjct: 10 GGKATTGPPLGPALGPLGLNLGQVVKDINEKTKNFAGMQVPVTVNVIDPATKKYEIIVGV 69
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
P ++L+ K L KK + + GN +++I ++ + R ++ G V EVLG
Sbjct: 70 PPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLG 127
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIEV 162
+ S+G TV+GR +++ + I NGEIE+
Sbjct: 128 SAVSLGITVDGRDPKEVQKMIKNGEIEI 155
>sp|Q8PY53|RL11_METMA 50S ribosomal protein L11P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl11p PE=3 SV=1
Length = 161
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQ-AAISV-VPS 76
GG+ L P +GPLG++ K+V + I + T D+ G+++ V + + +++ I V P
Sbjct: 11 GGKANPGPPLGPALGPLGVNIKEVVEKINEKTRDYNGMQVPVKVIVDDKKNVEIEVGTPP 70
Query: 77 AASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
ASL++K L +K N GN+ I ++ I+R + ++ T+KEV+G
Sbjct: 71 TASLVMKEL----GIQKGSGNAGSEVVGNLTIPQVAKIARMKKEDVLSYDLKATMKEVMG 126
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIE 161
TC +G VEG A+D +A+D G+ +
Sbjct: 127 TCVPMGVNVEGMKAKDCQKALDEGKFD 153
>sp|Q971J0|RL11_SULTO 50S ribosomal protein L11P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl11p PE=3 SV=1
Length = 170
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 11 KKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN--RQ 68
K + + GG V LAP + LGL+ +V I AT +KG+ + V L + ++
Sbjct: 4 KSIKIVVEGGNVKPGPPLAPTLSQLGLNVGEVVKKINDATSQFKGMSVPVTLEVDTDTKK 63
Query: 69 AAISV-VPSAASLIIKALK--EPPRD--RKKVKNVKHNGNVPIDEIYNISRTMRPRSMAR 123
I V +P+ SL++K EP D KKV G++ ++I ++ +P+ A+
Sbjct: 64 YEIKVGIPTTTSLLLKFANASEPSGDPAHKKV------GDIKFEDIIQVAIMKKPQITAK 117
Query: 124 KFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
VK +LGT S+G TV+ +S +++++A+D G+ +
Sbjct: 118 TLKAAVKSILGTAHSIGLTVDKKSPKELVKAVDEGKYD 155
>sp|P62445|RL11_METMP 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl11p PE=3 SV=1
Length = 159
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
V + GG+ A L P IGPLG++ +V I T D++G+ + V + + +
Sbjct: 6 VEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRTFE 65
Query: 73 V---VPSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVG 127
V +P A++LI K + K + KH GN+ +++I I++ + +A
Sbjct: 66 VEVGIPPASALIKKEI----GIEKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 128 TVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
KEV+GTC SVG +VEG + + +AID G+ +
Sbjct: 122 ASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
>sp|A6VH19|RL11_METM7 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl11p PE=3 SV=1
Length = 159
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
V + GG+ A L P IGPLG++ +V I + T D+ G+ + V + + +
Sbjct: 6 VEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINEMTKDYDGMSVPVKVIVNTDKRTFE 65
Query: 73 V---VPSAASLIIKAL------KEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSM 121
V +P A++L+ K L +EP KH GN+ ++++ I++ + +
Sbjct: 66 VEVGIPPASALVKKELGITTGSQEP----------KHQVAGNLTMEQVVKIAKMKQDAML 115
Query: 122 ARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
A KEV+GTC SVG VEG + ++ +A+D G+ +
Sbjct: 116 AYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
>sp|A9A9N0|RL11_METM6 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl11p PE=3 SV=1
Length = 159
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
V + GG+ A L P IGPLG++ +V I + T D+ G+ + V + + +
Sbjct: 6 VEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINEMTKDYDGMSVPVKVIVNTDKRTFE 65
Query: 73 V---VPSAASLIIKAL------KEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSM 121
V +P A++L+ K L +EP KH GN+ ++++ I++ + +
Sbjct: 66 VEVGIPPASALVKKELGITTGSQEP----------KHQVAGNLTMEQVVKIAKMKQDAML 115
Query: 122 ARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
A KEV+GTC SVG VEG + ++ +A+D G+ +
Sbjct: 116 AYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
>sp|A4FW91|RL11_METM5 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl11p PE=3 SV=1
Length = 159
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 21/160 (13%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
V + GG+ A L P IGPLG++ +V I T D+ G+ + V + + +
Sbjct: 6 VEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINDMTKDYDGMSVPVKVIVDTDKRTFE 65
Query: 73 V---VPSAASLIIKAL------KEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSM 121
V +P A++L+ K L +EP KH GN+ ++++ I++ + +
Sbjct: 66 VEVGIPPASALVKKELGIATGAQEP----------KHQVAGNLTMEQVVKIAKMKQDAML 115
Query: 122 ARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
A KEV+GTC SVG VEG + ++ +AID G+ +
Sbjct: 116 AYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAIDAGQFD 155
>sp|Q2NEW0|RL11_METST 50S ribosomal protein L11P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl11p PE=3 SV=1
Length = 160
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLT--IQNRQAAISV-VP 75
GG+ L P IGPLG++ +V ++I K T D+ G+K+ V +T + + IS+ P
Sbjct: 12 GGKATPGPPLGPAIGPLGINMMQVVEEINKKTADFGGMKVPVKITADMDTKDFEISIGTP 71
Query: 76 SAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLGT 135
+L++ L + V + +++ + ++R +A + KEV+GT
Sbjct: 72 PTTALVLDELGIESGSHEPGTEVA--ADFSVEQAFKVARMKFDDLLANDYKHATKEVIGT 129
Query: 136 CQSVGATVEGRSARDIIEAIDNGEIE 161
C S+G V+G+ R+ + IDNG+ +
Sbjct: 130 CVSMGINVQGKDGRETQKDIDNGDYD 155
>sp|Q0W049|RL11_UNCMA 50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I
GN=rpl11p PE=3 SV=1
Length = 158
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQ-NRQAAISV-VPS 76
GG+ L P +GPLG++ KKV D+I T D+ G+ + V + + +R + V P
Sbjct: 11 GGKANPGPPLGPALGPLGINIKKVVDEINNKTKDYNGMTVPVKVIVDASRNFTVEVGTPP 70
Query: 77 AASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLGTC 136
++L++ LK N G++ I++ +++ R ++ VKEV GTC
Sbjct: 71 TSALVLSELKL--EKGSGTPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTC 128
Query: 137 QSVGATVEGRSARDIIEAIDNGEIE 161
S+G +EG+ ++ I ++ G+ +
Sbjct: 129 VSLGVMIEGKKPKEFIAEVNAGKYD 153
>sp|A4YH87|RL11_METS5 50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl11p PE=3 SV=1
Length = 168
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 11 KKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN--RQ 68
K + + GG V LAP + LGL+ +V I +AT +KG+ + V L + ++
Sbjct: 4 KSIKVVVEGGNVKPGPPLAPTLSQLGLNVGEVVKKINEATSQFKGMTVPVTLDVDTDTKK 63
Query: 69 AAISV-VPSAASLIIK-ALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFV 126
+SV VP+ SL++K A P + K + GN+ +D++ ++ + +P A++
Sbjct: 64 YEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI---GNISMDDVIEVAISKKPSLTAKELK 120
Query: 127 GTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
G VK +LGT +S+G TV+ + + ++ ++ G+ +
Sbjct: 121 GAVKSILGTAKSIGLTVDNKDPKLVVREVEEGKYD 155
>sp|Q9HL70|RL11_THEAC 50S ribosomal protein L11P OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rpl11p PE=3 SV=2
Length = 156
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI---QNRQAAISV-V 74
GG+ + P +GPLGL+ +V +I + T +++G+++ V +T+ + ++ I+V +
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMRVPVTITVVDPETKKYEITVGI 70
Query: 75 PSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
P ++L+ K L K+ + + GN +D+I ++++T +A EVLG
Sbjct: 71 PPTSALLKKKLGIEKGAAKRKEAIA--GNATLDQIVDVAKTKMASMLASDLKAATLEVLG 128
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIEV 162
TC S+G V+G+ +++ I GEI +
Sbjct: 129 TCVSMGINVDGKDPKEVQRQIKAGEISI 156
>sp|Q8TI82|RL11_METAC 50S ribosomal protein L11P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl11p PE=3
SV=1
Length = 161
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQ-AAISV-VPS 76
GG+ L P +GPLG++ K+V + I + T D+ G+++ V + + +++ I V P
Sbjct: 11 GGKANPGPPLGPALGPLGVNIKEVVEKINEKTRDYNGMQVPVKVIVDDKKNVEIEVGTPP 70
Query: 77 AASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFVGTVKEVLG 134
ASL++K L +K N GN+ I ++ ++R + ++ +KEV+G
Sbjct: 71 TASLVMKEL----GIQKGSGNAGSEVVGNLTISQVAKVARMKKEDVLSYDLKAAMKEVMG 126
Query: 135 TCQSVGATVEGRSARDIIEAIDNGEIE 161
+C +G VEG A+D +A+D G+ +
Sbjct: 127 SCVPMGVNVEGMKAKDCQKALDEGKFD 153
>sp|A9A582|RL11_NITMS 50S ribosomal protein L11P OS=Nitrosopumilus maritimus (strain
SCM1) GN=rpl11p PE=3 SV=1
Length = 159
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 11 KKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKI--TVCLTIQNRQ 68
+K+ GG A L P +GPLG++ +V + I T D++G+K+ TV + ++
Sbjct: 4 QKISSLVTGGGASAGPPLGPALGPLGVNIMEVINAINDKTKDFEGMKVPVTVIVDSDTKK 63
Query: 69 AAISV-VPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVG 127
I + +PSAA+LI+K + + + G+V +D + ++ T S A
Sbjct: 64 YEIEIGIPSAAALIMK--EAGIQKGSGASGTEWAGDVTMDAVVKVANTKLENSYASSLKS 121
Query: 128 TVKEVLGTCQSVGATVEGRSARDIIEAIDNGE 159
K ++GTC ++G VEG++ ++I I+ G+
Sbjct: 122 VAKTIVGTCLALGVKVEGKTPKEITAEINEGK 153
>sp|Q8TX52|RL11_METKA 50S ribosomal protein L11P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl11p PE=3 SV=1
Length = 166
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 11 KKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTI--QNRQ 68
++V + GG+ L P +GPLG++ ++V ++I + T D+KG+++ V + + + R+
Sbjct: 4 EEVEVLIEGGKADPGPPLGPALGPLGVNIQEVVEEINRKTKDFKGMEVPVKIIVDTETRE 63
Query: 69 AAISVVPSAASLIIKALKEPPRDRKKVKNVKHN--GNVPIDEIYNISRTMRPRSMARKFV 126
+ V S IIK+ E D K +H G++ ++++ I++ ++
Sbjct: 64 FEVKVGSPPTSAIIKS--ELGID-KGAHEPRHETVGDLSMEQVIKIAKMKFDDLLSYDLK 120
Query: 127 GTVKEVLGTCQSVGATVEGRSARDIIEAIDNG 158
KE+LGTC S+G TVEG+ +++ + ID G
Sbjct: 121 TAAKEILGTCGSMGVTVEGKDPKEVQKEIDEG 152
>sp|O27715|RL11_METTH 50S ribosomal protein L11P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl11p PE=3 SV=1
Length = 160
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 19 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAISV---VP 75
GG+ L P IGPLG++ +V ++I + T D++G+K+ V + + V P
Sbjct: 12 GGKATPGPPLGPAIGPLGINMMQVVEEINRKTADFEGMKVPVKIIVDTDTRDFEVEVGTP 71
Query: 76 SAASLIIKALK------EPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRSMARKFVGTV 129
+LI+ LK +P D+ ++ ++++ I+R ++ + V
Sbjct: 72 PTTALIMDELKLEKGSQDPGMDKI--------ADISMEQVLKIARMKFDALLSNDYKRAV 123
Query: 130 KEVLGTCQSVGATVEGRSARDIIEAIDNG 158
KE++GTC S+G TV G+ R++ +D G
Sbjct: 124 KEIMGTCVSMGITVNGKDPREVQREVDQG 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,368,749
Number of Sequences: 539616
Number of extensions: 2417587
Number of successful extensions: 5878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 5692
Number of HSP's gapped (non-prelim): 470
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)