Your job contains 1 sequence.
>psy13547
MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV
CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKVKNVKHNGNVPIDEIYNISRTMRPRS
MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13547
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034968 - symbol:RpL12 "Ribosomal protein L12" spe... 620 1.5e-60 1
WB|WBGene00004424 - symbol:rpl-12 species:6239 "Caenorhab... 588 3.6e-57 1
ZFIN|ZDB-GENE-030131-5297 - symbol:rpl12 "ribosomal prote... 582 1.6e-56 1
UNIPROTKB|P61284 - symbol:RPL12 "60S ribosomal protein L1... 580 2.5e-56 1
UNIPROTKB|E2RR58 - symbol:RPL12 "60S ribosomal protein L1... 580 2.5e-56 1
UNIPROTKB|P30050 - symbol:RPL12 "60S ribosomal protein L1... 580 2.5e-56 1
UNIPROTKB|Q6QAS5 - symbol:RPL12 "60S ribosomal protein L1... 580 2.5e-56 1
UNIPROTKB|E1BTG1 - symbol:RPL12 "Uncharacterized protein"... 579 3.3e-56 1
RGD|1565106 - symbol:Rpl12 "ribosomal protein L12" specie... 579 3.3e-56 1
RGD|1595128 - symbol:LOC685320 "similar to 60S ribosomal ... 579 3.3e-56 1
UNIPROTKB|P23358 - symbol:Rpl12 "60S ribosomal protein L1... 579 3.3e-56 1
UNIPROTKB|F1LWC2 - symbol:F1LWC2 "Uncharacterized protein... 569 3.7e-55 1
RGD|1306318 - symbol:Rpl12-ps1 "ribosomal protein L12, ps... 567 6.1e-55 1
UNIPROTKB|G3MZG7 - symbol:LOC783641 "Uncharacterized prot... 564 1.3e-54 1
POMBASE|SPCC16C4.13c - symbol:rpl1201 "60S ribosomal prot... 550 3.8e-53 1
POMBASE|SPCC31H12.04c - symbol:rpl1202 "60S ribosomal pro... 550 3.8e-53 1
ASPGD|ASPL0000053192 - symbol:AN0262 species:162425 "Emer... 548 6.3e-53 1
UNIPROTKB|F1MDX5 - symbol:F1MDX5 "Uncharacterized protein... 546 1.0e-52 1
UNIPROTKB|F1PUJ6 - symbol:RPL12 "60S ribosomal protein L1... 525 1.7e-50 1
TAIR|locus:2061753 - symbol:AT2G37190 species:3702 "Arabi... 517 1.2e-49 1
CGD|CAL0006405 - symbol:RPL12 species:5476 "Candida albic... 516 1.5e-49 1
SGD|S000000780 - symbol:RPL12A "Ribosomal 60S subunit pro... 515 2.0e-49 1
SGD|S000002826 - symbol:RPL12B "Ribosomal 60S subunit pro... 515 2.0e-49 1
TAIR|locus:2084036 - symbol:AT3G53430 species:3702 "Arabi... 515 2.0e-49 1
TAIR|locus:2175841 - symbol:AT5G60670 species:3702 "Arabi... 515 2.0e-49 1
UNIPROTKB|F1N3R2 - symbol:F1N3R2 "Uncharacterized protein... 505 2.3e-48 1
UNIPROTKB|I3LBH4 - symbol:LOC100156825 "Uncharacterized p... 501 6.0e-48 1
UNIPROTKB|I3LFQ4 - symbol:I3LFQ4 "Uncharacterized protein... 485 3.0e-46 1
UNIPROTKB|I3LBL3 - symbol:LOC100523853 "Uncharacterized p... 481 7.9e-46 1
DICTYBASE|DDB_G0288295 - symbol:rpl12 "S60 ribosomal prot... 478 1.6e-45 1
RGD|1563956 - symbol:RGD1563956 "similar to 60S ribosomal... 475 3.4e-45 1
UNIPROTKB|J9NW89 - symbol:J9NW89 "Uncharacterized protein... 442 1.1e-41 1
UNIPROTKB|F1PHL1 - symbol:F1PHL1 "Uncharacterized protein... 427 4.2e-40 1
UNIPROTKB|F1S1A2 - symbol:F1S1A2 "Uncharacterized protein... 417 4.8e-39 1
UNIPROTKB|F1PJT3 - symbol:F1PJT3 "Uncharacterized protein... 398 4.9e-37 1
UNIPROTKB|F1MB63 - symbol:F1MB63 "Uncharacterized protein... 395 1.0e-36 1
UNIPROTKB|F1LY34 - symbol:F1LY34 "Uncharacterized protein... 395 1.0e-36 1
UNIPROTKB|F1M4N3 - symbol:LOC499782 "Protein LOC685320" s... 367 9.5e-34 1
UNIPROTKB|F1M2I2 - symbol:F1M2I2 "Uncharacterized protein... 218 5.1e-26 2
UNIPROTKB|F1PH72 - symbol:F1PH72 "Uncharacterized protein... 294 5.2e-26 1
UNIPROTKB|J9NWC5 - symbol:PPHLN1 "Uncharacterized protein... 260 2.1e-22 1
>FB|FBgn0034968 [details] [associations]
symbol:RpL12 "Ribosomal protein L12" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:AE013599 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE GeneTree:ENSGT00390000006922
CTD:6136 ChiTaRS:RPL12 EMBL:AY071246 RefSeq:NP_524819.1
RefSeq:NP_726412.1 RefSeq:NP_726413.1 UniGene:Dm.7505 SMR:Q9W1B9
IntAct:Q9W1B9 MINT:MINT-312526 STRING:Q9W1B9
EnsemblMetazoa:FBtr0072174 EnsemblMetazoa:FBtr0072175
EnsemblMetazoa:FBtr0072176 GeneID:45329 KEGG:dme:Dmel_CG3195
UCSC:CG3195-RA FlyBase:FBgn0034968 InParanoid:Q9W1B9
OrthoDB:EOG4CC2HM GenomeRNAi:45329 NextBio:838036 Uniprot:Q9W1B9
Length = 165
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 123/165 (74%), Positives = 134/165 (81%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTEVK VYLRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT DWKGLKITV
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
CLTIQNRQAAISVVPSAASLIIKALKEPPRDR ++I I+R MRPRS
Sbjct: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
MAR+ GT KEVLGT QSVG TV+G+ D+I+ ++ G IEVP E
Sbjct: 121 MARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPAE 165
>WB|WBGene00004424 [details] [associations]
symbol:rpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0032940
GO:GO:0006412 GO:GO:0000003 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:Z82274 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 PIR:T23150
RefSeq:NP_001040960.1 RefSeq:NP_502542.1 ProteinModelPortal:P61866
SMR:P61866 DIP:DIP-26259N IntAct:P61866 MINT:MINT-1060363
STRING:P61866 PaxDb:P61866 PRIDE:P61866 EnsemblMetazoa:JC8.3a
GeneID:178279 KEGG:cel:CELE_JC8.3 UCSC:JC8.3a.2 CTD:178279
WormBase:JC8.3a WormBase:JC8.3c InParanoid:P61866 NextBio:900474
Uniprot:P61866
Length = 165
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 114/165 (69%), Positives = 131/165 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTE+K VYLRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNR A I VVPSAASLI+K LKEPPRDR +D I I+R MRPRS
Sbjct: 61 KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
MA+K GTVKE+LGT QSVG T++G+ DIIE+I NGEIE+P +
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIPAQ 165
>ZFIN|ZDB-GENE-030131-5297 [details] [associations]
symbol:rpl12 "ribosomal protein L12" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 ZFIN:ZDB-GENE-030131-5297 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 CTD:6136 HOVERGEN:HBG007231 EMBL:BC049061
IPI:IPI00509732 RefSeq:NP_963878.3 UniGene:Dr.75945
ProteinModelPortal:Q7ZUG1 SMR:Q7ZUG1 STRING:Q7ZUG1 GeneID:327089
KEGG:dre:327089 InParanoid:Q7ZUG1 NextBio:20809876
ArrayExpress:Q7ZUG1 Uniprot:Q7ZUG1
Length = 165
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 113/165 (68%), Positives = 131/165 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K V++RC GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGPRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQAAI VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVAFDEIVNIARVMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+AR+ GT+KE+LGT QSVG T++GR D+I+ I++G +E P E
Sbjct: 121 IARELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGAVECPTE 165
>UNIPROTKB|P61284 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
UniGene:Bt.23981 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 EMBL:AY528249
EMBL:BC102693 EMBL:BC142032 IPI:IPI00700975 RefSeq:NP_991366.1
ProteinModelPortal:P61284 SMR:P61284 STRING:P61284 PRIDE:P61284
Ensembl:ENSBTAT00000009152 Ensembl:ENSBTAT00000009155 GeneID:404133
KEGG:bta:404133 CTD:6136 HOVERGEN:HBG007231 InParanoid:P61284
OrthoDB:EOG473PSB NextBio:20817570 ArrayExpress:P61284
Uniprot:P61284
Length = 165
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|E2RR58 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 GeneTree:ENSGT00390000006922 CTD:6136
RefSeq:NP_001238885.1 UniGene:Cfa.39098 PDB:2ZKR PDBsum:2ZKR
ProteinModelPortal:E2RR58 SMR:E2RR58 PRIDE:E2RR58
Ensembl:ENSCAFT00000045165 GeneID:480716 KEGG:cfa:480716
EvolutionaryTrace:E2RR58 NextBio:20855696 Uniprot:E2RR58
Length = 165
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|P30050 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471090
GO:GO:0003723 GO:GO:0003735 GO:GO:0006415 GO:GO:0006414
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 EMBL:AL445222
GO:GO:0019083 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:L06505 EMBL:BC050644 EMBL:BC059950
EMBL:BC094831 EMBL:BC105603 IPI:IPI00024933 IPI:IPI00816063
PIR:S35531 RefSeq:NP_000967.1 UniGene:Hs.408054
ProteinModelPortal:P30050 SMR:P30050 IntAct:P30050
MINT:MINT-2802291 STRING:P30050 PhosphoSite:P30050 DMDM:266921
SWISS-2DPAGE:P30050 PaxDb:P30050 PRIDE:P30050 DNASU:6136
Ensembl:ENST00000361436 Ensembl:ENST00000536368 GeneID:6136
KEGG:hsa:6136 UCSC:uc004bqy.2 UCSC:uc004bqz.2 GeneCards:GC09M130209
H-InvDB:HIX0170298 HGNC:HGNC:10302 HPA:HPA003403 MIM:180475
neXtProt:NX_P30050 PharmGKB:PA34665 InParanoid:P30050 ChiTaRS:RPL12
GenomeRNAi:6136 NextBio:23835 ArrayExpress:P30050 Bgee:P30050
CleanEx:HS_RPL12 Genevestigator:P30050 GermOnline:ENSG00000197958
Uniprot:P30050
Length = 165
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|Q6QAS5 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 OMA:PRSMARE
GeneTree:ENSGT00390000006922 HOVERGEN:HBG007231 OrthoDB:EOG473PSB
EMBL:CU407118 EMBL:AY550045 UniGene:Ssc.17945 STRING:Q6QAS5
Ensembl:ENSSSCT00000006171 Uniprot:Q6QAS5
Length = 191
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 87 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 146
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 147 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 189
>UNIPROTKB|E1BTG1 [details] [associations]
symbol:RPL12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:PRSMARE
GeneTree:ENSGT00390000006922 EMBL:AADN02026932 IPI:IPI00574602
Ensembl:ENSGALT00000014314 Uniprot:E1BTG1
Length = 169
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 116/165 (70%), Positives = 131/165 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDPTEVK VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPTEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGSVSFDEIVNIARQMRHRS 120
Query: 121 MARKF--VGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG +++GR DII+ I++G IE P
Sbjct: 121 LARELSAAGTIKEILGTAQSVGCSIDGRHPHDIIDDINSGAIECP 165
>RGD|1565106 [details] [associations]
symbol:Rpl12 "ribosomal protein L12" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
GeneTree:ENSGT00390000006922 CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561 PIR:A36667
RefSeq:NP_001102668.1 UniGene:Rn.128979 UniGene:Rn.203094
UniGene:Rn.203151 ProteinModelPortal:P23358 SMR:P23358
IntAct:P23358 STRING:P23358 PRIDE:P23358 Ensembl:ENSRNOT00000042736
GeneID:499782 KEGG:rno:499782 UCSC:RGD:1565106 InParanoid:P23358
NextBio:703993 ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>RGD|1595128 [details] [associations]
symbol:LOC685320 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 RGD:1595128
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 IPI:IPI00779086
Ensembl:ENSRNOT00000021725 Uniprot:F8WFW0
Length = 191
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 87 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 146
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 147 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 189
>UNIPROTKB|P23358 [details] [associations]
symbol:Rpl12 "60S ribosomal protein L12" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 RGD:1565106 Pfam:PF03946 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 CTD:6136
HOVERGEN:HBG007231 OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561
PIR:A36667 RefSeq:NP_001102668.1 UniGene:Rn.128979
UniGene:Rn.203094 UniGene:Rn.203151 ProteinModelPortal:P23358
SMR:P23358 IntAct:P23358 STRING:P23358 PRIDE:P23358
Ensembl:ENSRNOT00000042736 GeneID:499782 KEGG:rno:499782
UCSC:RGD:1565106 InParanoid:P23358 NextBio:703993
ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 114/163 (69%), Positives = 129/163 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|F1LWC2 [details] [associations]
symbol:F1LWC2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 IPI:IPI00950092 Ensembl:ENSRNOT00000041683
Ensembl:ENSRNOT00000048189 Uniprot:F1LWC2
Length = 165
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 113/162 (69%), Positives = 127/162 (78%)
Query: 2 PPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVC 61
P KFDP E+K VYLRC GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 2 PTKFDPNEIKVVYLRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 62 LTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRSM 121
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSL 121
Query: 122 ARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>RGD|1306318 [details] [associations]
symbol:Rpl12-ps1 "ribosomal protein L12, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1306318 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00210164 PRIDE:D3ZJE2
Ensembl:ENSRNOT00000003002 UCSC:RGD:1306318 OMA:ITDDINS
NextBio:641573 Uniprot:D3ZJE2
Length = 165
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 112/163 (68%), Positives = 127/163 (77%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+G DI + I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGHHPHDITDDINSGAMECP 163
>UNIPROTKB|G3MZG7 [details] [associations]
symbol:LOC783641 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:TEILIRT
GeneTree:ENSGT00390000006922 EMBL:DAAA02048410
RefSeq:XP_003587427.1 Ensembl:ENSBTAT00000023331 GeneID:783641
KEGG:bta:783641 Uniprot:G3MZG7
Length = 165
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 112/163 (68%), Positives = 127/163 (77%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K VYLRC GGEVGATS+LAPKIG LGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGALGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+R M RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQRNIKHSGNITFDEIVNIARQMWHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>POMBASE|SPCC16C4.13c [details] [associations]
symbol:rpl1201 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPCC16C4.13c
PomBase:SPCC31H12.04c Pfam:PF03946 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0000027 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 105/165 (63%), Positives = 131/165 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +++R VGGEV S+LAPKIGPLGLSPKKVG+DIAKAT DWKGL++TV
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQAA+SVVPSA++L+IKALKEP RDR +DEI ++RTMR +S
Sbjct: 61 KLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+A++ GTVKE+LGT SVG TV+G++ D+ + IDNGEIE+P+E
Sbjct: 121 LAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165
>POMBASE|SPCC31H12.04c [details] [associations]
symbol:rpl1202 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
PomBase:SPCC16C4.13c PomBase:SPCC31H12.04c Pfam:PF03946
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 GO:GO:0022625
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 105/165 (63%), Positives = 131/165 (79%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +++R VGGEV S+LAPKIGPLGLSPKKVG+DIAKAT DWKGL++TV
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKATKDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQAA+SVVPSA++L+IKALKEP RDR +DEI ++RTMR +S
Sbjct: 61 KLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+A++ GTVKE+LGT SVG TV+G++ D+ + IDNGEIE+P+E
Sbjct: 121 LAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165
>ASPGD|ASPL0000053192 [details] [associations]
symbol:AN0262 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 OMA:PRSMARE EnsemblFungi:CADANIAT00002462
Uniprot:C8VUJ2
Length = 165
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 106/165 (64%), Positives = 128/165 (77%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK ++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK TGDWKGL++TV
Sbjct: 1 MPPKFDPNEVKIIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWKGLRVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA +SVVPSA+SL+IKALKEPPRDR P DEI I+R MR RS
Sbjct: 61 RLTIQNRQAQVSVVPSASSLVIKALKEPPRDRKKEKNIKHTKSIPFDEIVEIARKMRSRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
+A++ GTV E+LGT SVG V+GRS +D+ + + +GEI+VP E
Sbjct: 121 LAKELKGTVLEILGTAFSVGCKVDGRSPKDVSDDVKSGEIDVPSE 165
>UNIPROTKB|F1MDX5 [details] [associations]
symbol:F1MDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:DAAA02019094 IPI:IPI00704351
Ensembl:ENSBTAT00000024473 OMA:EIVNIAW NextBio:20928163
Uniprot:F1MDX5
Length = 165
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 109/163 (66%), Positives = 124/163 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPK DP E+K VYLRC GGEVGA S LAPKIGPLGLSPKKVGDDIAKATG WKGL+ITV
Sbjct: 1 MPPKLDPNEIKVVYLRCTGGEVGAMSVLAPKIGPLGLSPKKVGDDIAKATGGWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI+ M+ RS
Sbjct: 61 KLTIQNRQAQIEVVPSASTLIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAWQMQHRS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPYDIIDGINSGAVECP 163
>UNIPROTKB|F1PUJ6 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03000628
Ensembl:ENSCAFT00000003405 OMA:FSIARTM Uniprot:F1PUJ6
Length = 165
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 106/163 (65%), Positives = 124/163 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MP KFDP E+K VYLRC GGEVGATS+LA KI PLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPLKFDPNEIKVVYLRCTGGEVGATSALALKISPLGLSPKKVGDDIAKATSDWKGLRITV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VVPSA++LIIKALKEPPRDR DEI NI++ M+ +S
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNNTFDEIVNIAQQMQHQS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V+G DII+ I++G +E P
Sbjct: 121 LARELSGTIKEILGTGQSVGCNVDGCHPHDIIDDINSGAVECP 163
>TAIR|locus:2061753 [details] [associations]
symbol:AT2G37190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005773
"vacuole" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0009506 GO:GO:0009507 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
GO:GO:0009409 GO:GO:0008270 GO:GO:0003735 GO:GO:0019843
EMBL:AC006260 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 EMBL:AF372896 EMBL:BT002673
EMBL:AY086293 EMBL:Z17756 IPI:IPI00516681 PIR:F84789
RefSeq:NP_181256.1 UniGene:At.25014 ProteinModelPortal:P50883
SMR:P50883 IntAct:P50883 STRING:P50883 PaxDb:P50883 PRIDE:P50883
ProMEX:P50883 EnsemblPlants:AT2G37190.1 GeneID:818295
KEGG:ath:AT2G37190 TAIR:At2g37190 HOGENOM:HOG000082125
InParanoid:P50883 KO:K02870 OMA:PRSMARE ProtClustDB:PLN03072
Genevestigator:P50883 GermOnline:AT2G37190 Uniprot:P50883
Length = 166
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 97/165 (58%), Positives = 127/165 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDR D++ I+R MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
S+A++ GTV+E+LGTC SVG TV+G+ +DI + I +GE+E+PE
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPE 165
>CGD|CAL0006405 [details] [associations]
symbol:RPL12 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 CGD:CAL0006405
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0080
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
HOGENOM:HOG000082125 KO:K02870 RefSeq:XP_721592.1
RefSeq:XP_721712.1 ProteinModelPortal:Q5AJF7 SMR:Q5AJF7
STRING:Q5AJF7 GeneID:3636659 GeneID:3636787 KEGG:cal:CaO19.1635
KEGG:cal:CaO19.9203 Uniprot:Q5AJF7
Length = 165
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 102/164 (62%), Positives = 125/164 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+S+LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKFLYLRAVGGEVGASSALAPKIGPLGLSPKKVGEDIAKATKEYKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQNRQA SVVPSA+SL+I ALKEP RDR P+DEI+ I+R M+ +S
Sbjct: 61 QLRIQNRQATASVVPSASSLVITALKEPVRDRKKEKNVKHSGNIPLDEIFEIARKMQHKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
+ KE+LGT QSVG V+G++ DII+AI+ GEI+VPE
Sbjct: 121 FGKNLASVSKEILGTAQSVGCRVDGKNPHDIIDAINAGEIDVPE 164
>SGD|S000000780 [details] [associations]
symbol:RPL12A "Ribosomal 60S subunit protein L12A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 SGD:S000000780
Pfam:PF03946 GO:GO:0003723 EMBL:BK006939 GO:GO:0003735
GO:GO:0002181 EMBL:U18795 GO:GO:0000027 PDB:3J16 PDBsum:3J16
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O5H PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O5H HOGENOM:HOG000082125 KO:K02870
EMBL:X51519 EMBL:AY693201 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 ProteinModelPortal:P0CX53
SMR:P0CX53 EnsemblFungi:YDR418W EnsemblFungi:YEL054C GeneID:852026
GeneID:852032 GeneID:856656 KEGG:sce:YDR418W KEGG:sce:YDR422C
KEGG:sce:YEL054C CYGD:YEL054c EvolutionaryTrace:P0CX53
NextBio:970252 ArrayExpress:P0CX53 GermOnline:YEL054C
Uniprot:P0CX53
Length = 165
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 103/164 (62%), Positives = 123/164 (75%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQNRQAA SVVPSA+SL+I ALKEPPRDR +DEI I+R MR +S
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
R KE+LGT QSVG V+ ++ DIIE I+ GEIE+PE
Sbjct: 121 FGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIPE 164
>SGD|S000002826 [details] [associations]
symbol:RPL12B "Ribosomal 60S subunit protein L12B"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 SGD:S000002826 EMBL:U33007 Pfam:PF03946 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 GO:GO:0000027
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 EnsemblFungi:YDR418W
EnsemblFungi:YEL054C GeneID:852026 GeneID:852032 GeneID:856656
KEGG:sce:YDR418W KEGG:sce:YDR422C KEGG:sce:YEL054C NextBio:970252
EMBL:X51520 ProteinModelPortal:P0CX54 SMR:P0CX54 CYGD:YDR418w
GeneTree:ENSGT00390000006922 ArrayExpress:P0CX54 GermOnline:YDR418W
Uniprot:P0CX54
Length = 165
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 103/164 (62%), Positives = 123/164 (75%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP EVK +YLR VGGEVGA+++LAPKIGPLGLSPKKVG+DIAKAT ++KG+K+TV
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQNRQAA SVVPSA+SL+I ALKEPPRDR +DEI I+R MR +S
Sbjct: 61 QLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
R KE+LGT QSVG V+ ++ DIIE I+ GEIE+PE
Sbjct: 121 FGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIPE 164
>TAIR|locus:2084036 [details] [associations]
symbol:AT3G53430 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
GO:GO:0006412 EMBL:AL132966 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 ProtClustDB:PLN03072
EMBL:AY140102 EMBL:BT002590 IPI:IPI00532442 PIR:T45883
RefSeq:NP_190911.1 UniGene:At.22805 UniGene:At.68911
ProteinModelPortal:Q9LFH5 SMR:Q9LFH5 IntAct:Q9LFH5 STRING:Q9LFH5
PaxDb:Q9LFH5 PRIDE:Q9LFH5 EnsemblPlants:AT3G53430.1 GeneID:824511
KEGG:ath:AT3G53430 GeneFarm:223 TAIR:At3g53430 InParanoid:Q9LFH5
OMA:TAEFNGM Genevestigator:Q9LFH5 GermOnline:AT3G53430
Uniprot:Q9LFH5
Length = 166
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 97/165 (58%), Positives = 126/165 (76%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDR D++ I+R MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
S+A++ GTV+E+LGTC SVG TV+G+ +D+ + I GEIE+PE
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPE 165
>TAIR|locus:2175841 [details] [associations]
symbol:AT5G60670 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 EMBL:AB005246
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
ProtClustDB:PLN03072 EMBL:AY039614 EMBL:AY078025 EMBL:AY088164
IPI:IPI00540499 RefSeq:NP_200875.1 UniGene:At.22910
ProteinModelPortal:Q9FF52 SMR:Q9FF52 STRING:Q9FF52 PRIDE:Q9FF52
EnsemblPlants:AT5G60670.1 GeneID:836188 KEGG:ath:AT5G60670
GeneFarm:222 TAIR:At5g60670 InParanoid:Q9FF52 OMA:TEILIRT
Genevestigator:Q9FF52 GermOnline:AT5G60670 Uniprot:Q9FF52
Length = 166
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/166 (57%), Positives = 128/166 (77%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLKIT 59
MPPK DP+++ VY+R GGEVGA SSLAPKIGPLGL+PKK+G+DIAK T +WKGL++T
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPR 119
V LT+QNRQA ++VVPSAA+L+IKALKEP RDR D++ I++ MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPEE 165
S+A++ GTVKE+LGTC SVG TV+G+ +D+ E I++G+I++P E
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166
>UNIPROTKB|F1N3R2 [details] [associations]
symbol:F1N3R2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02007492
IPI:IPI00691456 Ensembl:ENSBTAT00000038959 Uniprot:F1N3R2
Length = 192
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/161 (63%), Positives = 119/161 (73%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ VYLRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV
Sbjct: 33 MPPKFDPNEINVVYLRCTSGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQ RQA I VVPSA++LIIKALKEPPRDR DEI N +R M RS
Sbjct: 93 KLTIQYRQAQIQVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIINTARQMWHRS 152
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
+AR+ GT+KE+LGT QS+G D+I+ I++G +E
Sbjct: 153 LARELSGTIKEILGTTQSIG-----HHPHDVIDDINSGTVE 188
>UNIPROTKB|I3LBH4 [details] [associations]
symbol:LOC100156825 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:CU326405
Ensembl:ENSSSCT00000010794 Uniprot:I3LBH4
Length = 191
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 100/161 (62%), Positives = 118/161 (73%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKF+P E+K +YLRC GE+ A S+LAPKIGPLGLSPK+VGDDIAKA GDWKGL+ITV
Sbjct: 27 MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
TIQNRQA + VVPSA++LIIKA KE PRDR DEI NI+R MR S
Sbjct: 87 KPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCS 146
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
+AR+ GT+KE+LGT QSVG V GR DII+ I +G +E
Sbjct: 147 LARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVE 187
>UNIPROTKB|I3LFQ4 [details] [associations]
symbol:I3LFQ4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSSSCT00000029393 OMA:GCRINGK
Uniprot:I3LFQ4
Length = 167
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 99/164 (60%), Positives = 116/164 (70%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLK-IT 59
MPPKFDP E+K VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKA G WKG +
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAXG-WKGFATLG 59
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPR 119
+ + I VVPSA++LIIKALKEPPRDR DEI NI+R MR R
Sbjct: 60 KSYNVSLQVVQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
S+AR+ G +KE+LGT QSVG V+GR DII+ I++G +E P
Sbjct: 120 SLARELSGKIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|I3LBL3 [details] [associations]
symbol:LOC100523853 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:FP090889
Ensembl:ENSSSCT00000016160 Uniprot:I3LBL3
Length = 191
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 99/163 (60%), Positives = 114/163 (69%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+K +YLRC GGE GA S+LAPKIGP GLSPKKVGDDI KATGDWKGL+ITV
Sbjct: 27 MPPKFDPKEIKVMYLRCTGGEGGAPSALAPKIGPPGLSPKKVGDDITKATGDWKGLRITV 86
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTI NRQA + VVPS ++LIIKALKE PRDR E +I+R MR S
Sbjct: 87 KLTIPNRQAQMEVVPSGSALIIKALKELPRDRKKQKNIKHSGNITFVETVSIARQMRHHS 146
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+A + GT+KE+LGT QSVG V GR II+ I G +E P
Sbjct: 147 LAGELSGTLKEILGTAQSVGCNVGGRHPHAIIDDIHRGAVECP 189
>DICTYBASE|DDB_G0288295 [details] [associations]
symbol:rpl12 "S60 ribosomal protein L12"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000911
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
dictyBase:DDB_G0288295 Pfam:PF03946 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000109 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE
RefSeq:XP_636797.1 HSSP:P35979 ProteinModelPortal:Q54J50 SMR:Q54J50
STRING:Q54J50 PRIDE:Q54J50 EnsemblProtists:DDB0229950
GeneID:8626554 KEGG:ddi:DDB_G0288295 ProtClustDB:PTZ00105
Uniprot:Q54J50
Length = 166
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 97/164 (59%), Positives = 120/164 (73%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPK DP+E +V+LR GGE GA S+LAPK+GPLG+SPKKVGDDIAKAT WKG+K++V
Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNR A V+PSA++L+IKALKEPPRDR P++EI I++TMR +S
Sbjct: 61 KLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVPE 164
+A F G+V E+LGT SVG V G+S RDI I +GEIEV E
Sbjct: 121 LAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEVVE 164
>RGD|1563956 [details] [associations]
symbol:RGD1563956 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1563956 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00362058 PRIDE:D4A8N3
Ensembl:ENSRNOT00000030686 NextBio:652136 Uniprot:D4A8N3
Length = 157
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 99/157 (63%), Positives = 114/157 (72%)
Query: 7 PTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQN 66
P E+K VYLRC EV ATS+LAPKIGPL LSPKKVGDDIAK TGDWKGL+ITV LTIQN
Sbjct: 3 PNEIKVVYLRCTRDEVRATSALAPKIGPLRLSPKKVGDDIAKTTGDWKGLRITVKLTIQN 62
Query: 67 RQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRSMARKFV 126
RQA I VVPSA++LIIKALKEPPRDR DEI NI+ MR +S+AR+
Sbjct: 63 RQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAGQMRHQSLARELS 122
Query: 127 GTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
GT+KE+LGT QSVG V+GR DI ++G +E P
Sbjct: 123 GTIKEILGTAQSVGCNVDGRHPHDI----NSGAVECP 155
>UNIPROTKB|J9NW89 [details] [associations]
symbol:J9NW89 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000021487
Uniprot:J9NW89
Length = 171
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 94/163 (57%), Positives = 112/163 (68%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ ++LRC GGEVGA S+LA KI P GLSPKKVG DI K G WKGL+ITV
Sbjct: 12 MPPKFDPNEINVMFLRCTGGEVGAMSALALKIDP-GLSPKKVGYDIVKTGGYWKGLRITV 70
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQNRQA I V+PSA++LIIKALKEPPRDR DE+ NI+ RS
Sbjct: 71 KLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKNIKHSGNITFDELVNIAH----RS 126
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V R+ DII+ I + +E P
Sbjct: 127 LARELSGTIKEILGTAQSVGCNVGCRNPHDIIDDISSYAVECP 169
>UNIPROTKB|F1PHL1 [details] [associations]
symbol:F1PHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000016097
Uniprot:F1PHL1
Length = 160
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 91/163 (55%), Positives = 110/163 (67%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
MPPKFDP E+ ++LRC GEV A S+LA KI P GLSPKKVG DI K G WKGL+ITV
Sbjct: 1 MPPKFDPNEINVMFLRCTSGEVSAMSALALKIDP-GLSPKKVGYDIVKTAGYWKGLRITV 59
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQNRQA I V+PSA++LIIKALKEPPRDR DE+ +I RS
Sbjct: 60 KLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKNIKHSGNITFDELVSIGH----RS 115
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+AR+ GT+KE+LGT QSVG V R+ DII+ I++ +E P
Sbjct: 116 LARELSGTIKEILGTAQSVGCNVGCRNPHDIIDDINSYAVECP 158
>UNIPROTKB|F1S1A2 [details] [associations]
symbol:F1S1A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
EMBL:CU929934 Ensembl:ENSSSCT00000019265 Uniprot:F1S1A2
Length = 158
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 93/163 (57%), Positives = 109/163 (66%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
M PKFDP ++K +YLRC GGE GA S+LAP IGPLGLSPKKVGDD+AKATGD KGL+I V
Sbjct: 1 MQPKFDPNKIKVIYLRCTGGEDGAPSALAPTIGPLGLSPKKVGDDVAKATGDCKGLRIIV 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
LTIQNRQA I VV SA++L IKALKE PR+R DEI NI R M S
Sbjct: 61 KLTIQNRQAQIEVVASASALPIKALKELPRERKQQKNIKHNGYITFDEIVNIDRQMGELS 120
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
G +KE+LGT QSVG V G II+ I++G ++ P
Sbjct: 121 ------GAIKEILGTAQSVGCDVAG-CHHAIIDDINSGAMQSP 156
>UNIPROTKB|F1PJT3 [details] [associations]
symbol:F1PJT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:AAEX03010427
Ensembl:ENSCAFT00000010621 OMA:NISSKRH Uniprot:F1PJT3
Length = 194
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 90/164 (54%), Positives = 107/164 (65%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PPKFDP E+K VYLRC GGEVGATS PKIGPLGLSPKKVGDD+AKAT +WK L+ITV
Sbjct: 34 LPPKFDP-EIKVVYLRCTGGEVGATS---PKIGPLGLSPKKVGDDMAKATSNWKDLRITV 89
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNIS-RTMRPR 119
LTIQNRQA I VVPSA++LII+ALK PPRD +EI NI+ R
Sbjct: 90 KLTIQNRQAQIEVVPSASALIIEALKGPPRDLKQKNIKHSGNIT-FEEIVNIADRCDTDL 148
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
+ +LGT QSVG V+G D+ + I++G E P
Sbjct: 149 EPENSLEPLKRSILGTGQSVGCNVDGCHPHDVRDDINSGAAECP 192
>UNIPROTKB|F1MB63 [details] [associations]
symbol:F1MB63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02033567
IPI:IPI00906805 Ensembl:ENSBTAT00000014127 Uniprot:F1MB63
Length = 163
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 80/161 (49%), Positives = 106/161 (65%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PP + EVK VYL C GGEVG S+L PKIGPLGL PK+V D KATGDWKGL+I +
Sbjct: 1 LPPGYHLNEVKVVYLWCTGGEVGVVSALLPKIGPLGLFPKEVDGDTTKATGDWKGLRIKM 60
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
+T QNRQA V+PSA++LI+KALKEPPR + DEI NI++ + +S
Sbjct: 61 KMTTQNRQAKAEVIPSASALILKALKEPPRQKQKNIKHSGNIT--FDEIINIAQQIWHQS 118
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
+ R+ GT+KE+L T QSVG + D+I+ I++G +E
Sbjct: 119 LPRELSGTIKEILATGQSVGCNADSCHPHDVIDDINSGVVE 159
>UNIPROTKB|F1LY34 [details] [associations]
symbol:F1LY34 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 IPI:IPI00950870
Ensembl:ENSRNOT00000066710 Uniprot:F1LY34
Length = 171
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 87/155 (56%), Positives = 104/155 (67%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
M PKF P+E+K + C GGEVG S+LA KIGP+ KKVGDD AKAT DWKGL++TV
Sbjct: 15 MLPKFKPSEIK---VMCTGGEVGVISTLALKIGPI----KKVGDDFAKATADWKGLRVTV 67
Query: 61 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPRS 120
L IQ RQ I VVPSA++LI+KALKEPPRDR DEI NI++ R S
Sbjct: 68 KLAIQ-RQVQIEVVPSASALIVKALKEPPRDRKKKKNIKYSGNITFDEIINIAQKTRHWS 126
Query: 121 MARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAI 155
+AR+ GT KE+LGT QSVG V+GR DII+ I
Sbjct: 127 LARELSGTSKEILGTAQSVGCNVDGRHPHDIIDDI 161
>UNIPROTKB|F1M4N3 [details] [associations]
symbol:LOC499782 "Protein LOC685320" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 SMART:SM00649
RGD:1595128 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF54747 IPI:IPI00948765 Ensembl:ENSRNOT00000064675
ArrayExpress:F1M4N3 Uniprot:F1M4N3
Length = 189
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 72/80 (90%), Positives = 76/80 (95%)
Query: 13 VYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLTIQNRQAAIS 72
VYLRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKATGDWKGL+ITV LTIQNRQA I
Sbjct: 104 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 163
Query: 73 VVPSAASLIIKALKEPPRDR 92
VVPSA++LIIKALKEPPRDR
Sbjct: 164 VVPSASALIIKALKEPPRDR 183
>UNIPROTKB|F1M2I2 [details] [associations]
symbol:F1M2I2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 IPI:IPI00387938
Ensembl:ENSRNOT00000033403 Uniprot:F1M2I2
Length = 160
Score = 218 (81.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 51/84 (60%), Positives = 61/84 (72%)
Query: 4 KFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITVCLT 63
K DP ++K ++LRC GG ATS+L PKIGP GLSPKK KATGDWKGL +TV LT
Sbjct: 30 KADP-KIKAMHLRCTGGR--ATSAL-PKIGPPGLSPKK------KATGDWKGLMVTVKLT 79
Query: 64 IQNRQAAISVVPSAASLIIKALKE 87
IQNRQA VVPSA +L +K L++
Sbjct: 80 IQNRQAQPEVVPSAPALALKELRD 103
Score = 91 (37.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 124 KFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIE 161
+ V T ++LGT SVG TV+G DIIE I+ G +E
Sbjct: 119 EIVNTAPQILGTAPSVGCTVDGCQPHDIIEGINGGALE 156
>UNIPROTKB|F1PH72 [details] [associations]
symbol:F1PH72 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03003112
Ensembl:ENSCAFT00000004329 Uniprot:F1PH72
Length = 158
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 74/157 (47%), Positives = 93/157 (59%)
Query: 1 MPPKFDPTEVKKVYLRCVGG-EVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKIT 59
M PKFDP ++K +YL C+GG EV TS L KI PL LSPKK GDDI KATG K L IT
Sbjct: 1 MLPKFDP-KIKVIYLWCIGGGEVCNTSVLVQKIRPLDLSPKKAGDDITKATGGLKFLGIT 59
Query: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRPR 119
V LTIQN QA + VVPSA++LII+A P R+ + M R
Sbjct: 60 VKLTIQNTQAQLEVVPSASALIIRA---PTRNHLEIEAKHIKHSANV----TFDELMWHR 112
Query: 120 SMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAID 156
S+AR+ T+KE+LGT +G V+G +II+ I+
Sbjct: 113 SLARELSKTIKEILGTAPYMGCNVDGCHPYEIIDDIN 149
>UNIPROTKB|J9NWC5 [details] [associations]
symbol:PPHLN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 EMBL:AAEX03015128 GeneTree:ENSGT00390000016228
EMBL:AAEX03015129 Ensembl:ENSCAFT00000046129 Uniprot:J9NWC5
Length = 167
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 67/165 (40%), Positives = 93/165 (56%)
Query: 1 MPPKFDPTEVKKVYLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGLKITV 60
+PP+ P+E K VYLRC GEV A S L PKIG L SP +V DD+AKAT D
Sbjct: 17 IPPRSHPSETKIVYLRCTHGEVSALSVLVPKIGLLSPSPIEVADDLAKATDD-------- 68
Query: 61 CL-TIQNRQAAIS-VVPSAASLIIKALKEPPRDRXXXXXXXXXXXXPIDEIYNISRTMRP 118
C+ T + Q ++ VV SA++LI++ LKEPPRD DEI +I++ M
Sbjct: 69 CVVTDHSEQTSLDEVVFSASALIVRVLKEPPRDWKKQKNIKHSGNISFDEIVSIAQQMHH 128
Query: 119 RSMARKFVGTVKEVLGTCQSVGATVEGRSARDIIEAIDNGEIEVP 163
++A++F GT+KE+LGT V+ DI ++G +E P
Sbjct: 129 WALAKRFSGTIKEILGT----RCNVDDHHPHDI----NSGTVECP 165
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 153 0.00081 105 3 11 22 0.39 32
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 545 (58 KB)
Total size of DFA: 122 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.41u 0.09s 12.50t Elapsed: 00:00:03
Total cpu time: 12.41u 0.09s 12.50t Elapsed: 00:00:03
Start: Thu Aug 15 14:13:23 2013 End: Thu Aug 15 14:13:26 2013