BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1355
(76 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma
variegatum]
Length = 179
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 46/54 (85%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RTGTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 49/59 (83%)
Query: 7 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+NS GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ANSPRAGGGAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 60
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|158297331|ref|XP_317585.4| AGAP007901-PA [Anopheles gambiae str. PEST]
gi|157015144|gb|EAA43939.4| AGAP007901-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 46/52 (88%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 GGAAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 64
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 GGAAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 60
>gi|325303412|tpg|DAA34125.1| TPA_exp: Rab5-related subfamily protein 480 [Amblyomma
variegatum]
Length = 113
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|328790844|ref|XP_003251474.1| PREDICTED: ras-related protein Rab-5B-like [Apis mellifera]
Length = 221
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 9 GGGAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 61
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 46/57 (80%)
Query: 9 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ R G QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 58
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R G +QRPN + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 ARPGAVQRPNGIPREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|240976227|ref|XP_002402331.1| RAS-related protein, putative [Ixodes scapularis]
gi|215491138|gb|EEC00779.1| RAS-related protein, putative [Ixodes scapularis]
Length = 175
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Query: 11 GRGGRI-QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG + QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGAAVAQRPNGAPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 58
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GR G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRTG-AQRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 20 QRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 67
>gi|312376181|gb|EFR23347.1| hypothetical protein AND_13023 [Anopheles darlingi]
Length = 183
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 45/53 (84%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GG QR N TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 GGAAQRTNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 60
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 7 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
S++ GG QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 9 SSTGSSGGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 67
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 10 NGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+GR G +QR N + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 SGRPGTVQRANGIPREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG QRPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 RGG-AQRPNGATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 44/49 (89%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
QRPN QT KICQ+KLVLLGES+VGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 QRPNGQTPGKICQFKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
G +QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GNVQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 54
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 4 SNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+N + G G QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 2 ANTPRAGGAGA--QRPNGTVQNKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 59
Query: 64 GC 65
Sbjct: 60 AA 61
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
QRPN Q K+CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 QRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MA S + G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATSPRTGGASGAGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 60
Query: 61 TIGGC 65
TIG
Sbjct: 61 TIGAA 65
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MA + S G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATTPRSGGASGTGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 60
Query: 61 TIGGC 65
TIG
Sbjct: 61 TIGAA 65
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MA + S +G G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQES
Sbjct: 1 MATTPRSGGSGSGAA-QRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES 59
Query: 61 TIGGC 65
TIG
Sbjct: 60 TIGAA 64
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 3/56 (5%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGA--ARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 55
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|149029652|gb|EDL84823.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 63
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIGG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGG 55
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQE 59
+++S+N R RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQE
Sbjct: 5 LSHSDNLAMTSRS--TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQE 62
Query: 60 STIGGC 65
STIG
Sbjct: 63 STIGAA 68
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 3/56 (5%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRG RPN Q+QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGA--ARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 44/52 (84%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 GAAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 64
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 44/52 (84%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 GAAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 64
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 44/52 (84%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 GTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 64
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGGATRPNGAAVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 58
>gi|149029653|gb|EDL84824.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 154
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 7 QRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 54
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda
melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|354721179|ref|NP_001238966.1| ras-related protein Rab-5B isoform 2 [Homo sapiens]
gi|332839021|ref|XP_001153865.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan troglodytes]
gi|359320551|ref|XP_003639370.1| PREDICTED: ras-related protein Rab-5B [Canis lupus familiaris]
gi|397509156|ref|XP_003825002.1| PREDICTED: ras-related protein Rab-5B isoform 3 [Pan paniscus]
gi|410964759|ref|XP_003988920.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Felis catus]
gi|426224981|ref|XP_004006647.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Ovis aries]
gi|441631972|ref|XP_003252884.2| PREDICTED: ras-related protein Rab-5B isoform 2 [Nomascus
leucogenys]
gi|119617270|gb|EAW96864.1| RAB5B, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|194383186|dbj|BAG59149.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 43/52 (82%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GPPQRPNGSAVGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|26350195|dbj|BAC38737.1| unnamed protein product [Mus musculus]
gi|74190579|dbj|BAE25935.1| unnamed protein product [Mus musculus]
gi|148692651|gb|EDL24598.1| RAB5B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 168
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|196000895|ref|XP_002110315.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
gi|190586266|gb|EDV26319.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
Length = 229
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 45/51 (88%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
G+ QRPN Q+KICQ+KLVLLGESAVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 5 GQPQRPNGSGQSKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGA 55
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG QRPN TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGG-AQRPNG-TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 55
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
QRPN +Q K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 17 QRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 65
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTAQRPNGQ--GKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 54
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN Q QA KICQ++LVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RPNGQPQASKICQFELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|402900351|ref|XP_003919574.1| PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase KAT2A
[Papio anubis]
Length = 954
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 86 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 139
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R G + N TQ KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RTGAPRPANSGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 40 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 87
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GR G RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRSGGATRPNGATVTNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 58
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 35 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 82
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G QRPN Q+KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GGAQRPNG-PQSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 55
>gi|262401109|gb|ACY66457.1| rab5 [Scylla paramamosain]
Length = 76
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+QRP+ Q KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 1 VQRPSGGGQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 49
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 49 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 96
>gi|351699897|gb|EHB02816.1| Ras-related protein Rab-5C [Heterocephalus glaber]
Length = 209
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVP 69
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIGG G+
Sbjct: 3 GRGG-AARPNGPAVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGG-GSFE 60
Query: 70 GR 71
GR
Sbjct: 61 GR 62
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis
niloticus]
Length = 220
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG + +KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGTAASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 60 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 107
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 47/57 (82%), Gaps = 3/57 (5%)
Query: 11 GRGGRIQRPNDQTQA--KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN A KICQ+KLVLLGESAVGKSSL+LRFV+GQFHE+QESTIGG
Sbjct: 3 GRGGAT-RPNGPNAASNKICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGGA 58
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 35 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 89
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Query: 11 GRGGRIQRPNDQTQA--KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 58
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 43/55 (78%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGTTRTNGTAVSNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein,
PIR Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG +RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-ARRPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-TARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda
melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 73 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 127
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG C
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSC 56
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 22 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 69
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName:
Full=Rab5C-like protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis
domestica]
Length = 216
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R G QRP Q K+ Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RSGTAQRPTGAFQGKVHQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAANNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGP-ARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|119581212|gb|EAW60808.1| RAB5C, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 165
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 43/55 (78%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG + KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|47218775|emb|CAG02761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 228
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN +KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|431890611|gb|ELK01490.1| Ras-related protein Rab-5C [Pteropus alecto]
Length = 258
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/55 (80%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIGG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGG 56
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T A KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 1 RPNGATVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 49
>gi|148670589|gb|EDL02536.1| RAB5C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 270
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 39 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 92
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 282 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 335
>gi|26354324|dbj|BAC40790.1| unnamed protein product [Mus musculus]
Length = 234
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
N T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 11 NGATAGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Query: 14 GRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTTARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 GRGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 43/46 (93%), Gaps = 1/46 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
RPN Q QA KICQ+KLVLLGESAVGKSS+VLRFV+GQFHEYQESTI
Sbjct: 801 RPNGQPQASKICQFKLVLLGESAVGKSSVVLRFVKGQFHEYQESTI 846
>gi|432092944|gb|ELK25302.1| Histone acetyltransferase KAT2B [Myotis davidii]
Length = 846
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 47/64 (73%), Gaps = 9/64 (14%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MAN + NG PN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QES
Sbjct: 1 MANRGATRPNG-------PN--TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES 51
Query: 61 TIGG 64
TIG
Sbjct: 52 TIGA 55
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 RGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|47940707|gb|AAH72495.1| Rab5a protein [Rattus norvegicus]
Length = 61
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIGG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGG 55
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Query: 14 GRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 GTSARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 57
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 36 GRGG-AARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 89
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 4 SKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 44
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 38/39 (97%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 43
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPDTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|109131470|ref|XP_001086669.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Macaca mulatta]
gi|355704975|gb|EHH30900.1| hypothetical protein EGK_20720 [Macaca mulatta]
gi|355757526|gb|EHH61051.1| hypothetical protein EGM_18978 [Macaca fascicularis]
Length = 215
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda
melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 7 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 55
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis
domestica]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 7 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 55
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 11 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 59
>gi|403265499|ref|XP_003924970.1| PREDICTED: ras-related protein Rab-5A [Saimiri boliviensis
boliviensis]
Length = 174
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 55
>gi|296491534|tpg|DAA33577.1| TPA: ras-related protein Rab-5A [Bos taurus]
Length = 160
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|47218843|emb|CAG02828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/40 (90%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 10 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 49
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|397511745|ref|XP_003826227.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pan paniscus]
Length = 202
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|395816588|ref|XP_003781782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Otolemur
garnettii]
gi|410971501|ref|XP_003992207.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Felis catus]
Length = 201
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|194381626|dbj|BAG58767.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|332215306|ref|XP_003256782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Nomascus
leucogenys]
gi|395734106|ref|XP_003776358.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pongo abelii]
Length = 201
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
RPN T KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG 54
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/40 (90%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 19 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 58
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis
niloticus]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis
niloticus]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
GRGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 3 GRGGP-ARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAA 57
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The
C2h2 Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The
C2h2 Zinc Finger Of Eea1
Length = 168
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 2 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 41
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 43
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 37/39 (94%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 1 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 39
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 43
>gi|2689233|emb|CAA72630.1| rab5A-like protein [Trichinella spiralis]
Length = 79
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN K CQ+KLVLLGESAVGKSSLVLRF +GQFHE+QESTIG
Sbjct: 8 RPNGMNANKTCQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGA 54
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 56
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis
niloticus]
Length = 222
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 20 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 58
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 37/39 (94%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 3 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 41
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 7 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
S+ + R G RPN K CQ+KLVLLGESAVGKSSLVLRF +GQFHE+QESTIG
Sbjct: 15 SDMSSRTG--NRPNGMNANKTCQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGA 70
>gi|432098875|gb|ELK28370.1| Ras-related protein Rab-5C [Myotis davidii]
Length = 184
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 11 GRGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G+GG RPN KICQ+KLVLLGESAVGKSSLVL FV+GQFHEYQESTIG
Sbjct: 3 GQGGA-ARPNGPAAGNKICQFKLVLLGESAVGKSSLVLHFVKGQFHEYQESTIGAA 57
>gi|268561646|ref|XP_002646494.1| Hypothetical protein CBG19476 [Caenorhabditis briggsae]
Length = 106
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 8 NSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
NS G R PN + CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 5 NSAGGAARPGGPN-----RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 56
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 17 KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 12 RGGRIQRPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RGG RPN T KI Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGGAT-RPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 57
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
R G PN K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 RSGNTGGPN-----KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|402586726|gb|EJW80663.1| Rab5 protein, partial [Wuchereria bancrofti]
Length = 146
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 17 KTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 56
>gi|47229414|emb|CAF99402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 12 RGGRIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RGG RPN KICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 4 RGG-ATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex
With Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex
With Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex
With Gtp
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|349802461|gb|AEQ16703.1| putative muscle ras oncogene [Pipa carvalhoi]
Length = 130
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 10/65 (15%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MAN S +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRTGSRANGLG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 61 TIGGC 65
TIG
Sbjct: 51 TIGAA 55
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex
With Gppnhp
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 12 KSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 51
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex
With Gppnhp
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex
With Gppnhp
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|351709785|gb|EHB12704.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 178
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RP+ Q QA KICQ+KLVLLGE+AVGKSSL L FV+GQFH+YQESTIG
Sbjct: 3 RPSGQPQASKICQFKLVLLGETAVGKSSLALCFVKGQFHKYQESTIGA 50
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 15 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 54
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 16 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAA 55
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 10/65 (15%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MAN ++ +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF EYQE+
Sbjct: 1 MANRGSTRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQET 50
Query: 61 TIGGC 65
TIG
Sbjct: 51 TIGAA 55
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 37/39 (94%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ CQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTIG
Sbjct: 17 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA 55
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex
With Gppnhp
Length = 170
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KICQ+KLVLLGES VGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 3 KICQFKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGAA 42
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 37/38 (97%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGA 56
>gi|73535746|pdb|1Z07|A Chain A, Gppnhp-Bound Rab5c G55q Mutant Gtpase
Length = 166
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/36 (94%), Positives = 36/36 (100%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
ICQ+KLVLLGESAVGKSSLVLRFV+GQFHEYQESTI
Sbjct: 3 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 38
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 10/65 (15%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MA+ +S +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF EYQE+
Sbjct: 1 MASRGSSRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQET 50
Query: 61 TIGGC 65
TIG
Sbjct: 51 TIGAA 55
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 10 NGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N RG ++ + Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 2 NSRGSGVRSNSTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 56
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis
niloticus]
Length = 216
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 8 NSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+S G GGR TQ KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 2 SSRGSGGRSN--GTLTQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAA 57
>gi|321452396|gb|EFX63788.1| hypothetical protein DAPPUDRAFT_334984 [Daphnia pulex]
Length = 254
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 40/51 (78%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGN 67
Q PN TQ KICQ KL+LLGES V KSSLVL FV+GQF +YQESTIGG N
Sbjct: 176 QLPNCVTQDKICQLKLLLLGESVVDKSSLVLHFVKGQFPDYQESTIGGKQN 226
>gi|449664040|ref|XP_002167518.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Hydra magnipapillata]
Length = 225
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 43/65 (66%), Gaps = 12/65 (18%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLL------------GESAVGKSSLVLRFVRGQFHEYQE 59
R G QRPN Q KI +KLVLL GESAVGKSSLVLRFV+GQFHEYQE
Sbjct: 3 RSGTPQRPNGAPQGKIQPFKLVLLELINLIMQVIFLGESAVGKSSLVLRFVKGQFHEYQE 62
Query: 60 STIGG 64
STIG
Sbjct: 63 STIGA 67
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 10/65 (15%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MAN + +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRGSLRANGAG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 61 TIGGC 65
TIG
Sbjct: 51 TIGAA 55
>gi|351713433|gb|EHB16352.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 221
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+KLVLLGES VGKSSLVL FV+GQFHE+QEST G
Sbjct: 8 RPNGANTGNKICQFKLVLLGESVVGKSSLVLHFVKGQFHEFQESTTGA 55
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 10/65 (15%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
MAN + +NG G Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+
Sbjct: 1 MANRGSLRANGVG----------QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQET 50
Query: 61 TIGGC 65
TIG
Sbjct: 51 TIGAA 55
>gi|395743828|ref|XP_003777995.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5A-like
[Pongo abelii]
Length = 203
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 37/38 (97%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
KICQ+KLVLLGESAVGKSSLVLR V+GQFHE++ESTIG
Sbjct: 17 KICQFKLVLLGESAVGKSSLVLRSVKGQFHEFRESTIG 54
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 16 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 56
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGA 55
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 37/40 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I Q+KLVLLGESAVGKSSLVLRFV+GQFHE+QESTIG
Sbjct: 22 RIFQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAA 61
>gi|351700861|gb|EHB03780.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 108
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+KLVLLGESA+GKSSLVLRFV+ QFHE+QEST G
Sbjct: 8 RPNGPNTGNKICQFKLVLLGESALGKSSLVLRFVKVQFHEFQESTTGA 55
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAA 56
>gi|55962806|emb|CAI11700.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 145
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KICQ+KLVLLG+ AVGKSSLVLRFV+GQF E+QE+TIG
Sbjct: 15 QTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAA 56
>gi|390474524|ref|XP_003734793.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Callithrix jacchus]
Length = 176
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ--ESTI 62
G+GG Q KICQ+KLVLLGESAVGKSSLVL F++GQFHEYQ ESTI
Sbjct: 3 GQGGAAQPSGPAGGNKICQFKLVLLGESAVGKSSLVLCFIKGQFHEYQRAESTI 56
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
AK +KLVLLGES+VGKSSLVLRFVRGQF EYQESTIG
Sbjct: 10 AKSVPFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGAA 50
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P +T A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 52
>gi|351709741|gb|EHB12660.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 84
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 18 RPN-DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN T KICQ+ LVLLGESA+GKSSLVLRF +GQFHE+QES +G
Sbjct: 8 RPNGPNTGNKICQFTLVLLGESALGKSSLVLRFGKGQFHEFQESIMGA 55
>gi|330846456|ref|XP_003295044.1| Rab GTPase [Dictyostelium purpureum]
gi|325074347|gb|EGC28427.1| Rab GTPase [Dictyostelium purpureum]
Length = 199
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAA 45
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAA 45
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q+KLVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 6 KIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAA 45
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGE+AVGKSSLVLRFV+GQF EYQESTIG
Sbjct: 11 QFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIGAA 47
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P + A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRPSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 52
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R+Q+ + A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 AARMQQGGRPSGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
TQ K Q+KLVLLGESAVGKSSLV+RFV+ F EY+ESTIG
Sbjct: 5 TQGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAA 47
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KI Q+KLVLLGE+AVGKSSLVLRFV+G+F ++QESTIG
Sbjct: 10 KIIQFKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGA 48
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 55
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
Query: 9 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
S GR + QRP ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SAGRMQQGQRPGG---SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 55
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 ARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 52
>gi|325183801|emb|CCA18260.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 211
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
TQ K C +KLVLLG++AVGKS LV+RFVR +F EYQE TIG
Sbjct: 17 TQRKTCHFKLVLLGDTAVGKSCLVVRFVRNEFFEYQEPTIGA 58
>gi|296413464|ref|XP_002836433.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630252|emb|CAZ80624.1| unnamed protein product [Tuber melanosporum]
Length = 218
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R + Q+Q + Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 5 RASTQSQ-RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 51
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 8 RMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 47
>gi|388858617|emb|CCF47914.1| probable GTP-binding protein ypt5 [Ustilago hordei]
Length = 223
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q ++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 4 QRNPRMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 47
>gi|145349469|ref|XP_001419155.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579386|gb|ABO97448.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 200
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 33/40 (82%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
A I Q KLVLLG+ GKSSLVLRFV+GQFHEYQESTIG
Sbjct: 8 AAITQAKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGA 47
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta
CCMP2712]
Length = 204
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLVLLGE AVGKSSLVLRFVRGQF +YQESTIG
Sbjct: 11 FKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGAA 46
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 51
>gi|320169835|gb|EFW46734.1| RAB5B [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/32 (90%), Positives = 32/32 (100%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHE 56
AKICQ+KLVLLGESAVGKSSLVLRFV+GQFH+
Sbjct: 16 AKICQFKLVLLGESAVGKSSLVLRFVKGQFHD 47
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q K Q+KLVLLGESAVGKSSLV+RFV+ F EY+ESTIG
Sbjct: 4 QGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAA 45
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora
larici-populina 98AG31]
Length = 216
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
RPN A Q+KLVLLGESAVGKSSLVLRFV+ F EY+ESTIG
Sbjct: 5 RPNSTRPA--YQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAA 50
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 16 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 56
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 54
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum
CS3096]
Length = 220
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC
1015]
Length = 218
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAA 53
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 53
>gi|342876816|gb|EGU78372.1| hypothetical protein FOXB_11123 [Fusarium oxysporum Fo5176]
Length = 225
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|392597767|gb|EIW87089.1| GTP-binding protein RAB5 [Coniophora puteana RWD-64-598 SS2]
Length = 224
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 42
>gi|343427700|emb|CBQ71227.1| probable GTP-binding protein ypt5 [Sporisorium reilianum SRZ2]
Length = 221
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 48
>gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
gi|46098290|gb|EAK83523.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
Length = 221
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 12 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 48
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 42
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune
H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune
H4-8]
Length = 208
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|403297081|ref|XP_003945248.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5B [Saimiri
boliviensis boliviensis]
Length = 342
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 18 RPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
RPN Q QA KICQ+KLVLLGESAVGKSSLVLRFV+G F +
Sbjct: 132 RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGIFPSF 172
>gi|393246972|gb|EJD54480.1| ras-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 207
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|151337003|gb|ABS00941.1| GTP-binding protein RAB5 [Lentinula edodes]
Length = 207
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|390604985|gb|EIN14376.1| ras-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 208
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|426201327|gb|EKV51250.1| GTP-binding protein RAB5 [Agaricus bisporus var. bisporus H97]
Length = 207
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|409083629|gb|EKM83986.1| hypothetical protein AGABI1DRAFT_110587 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 209
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSSLVLRFV+ QF +++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAA 55
>gi|409051991|gb|EKM61467.1| hypothetical protein PHACADRAFT_248102 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|336376939|gb|EGO05274.1| hypothetical protein SERLA73DRAFT_174346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389987|gb|EGO31130.1| hypothetical protein SERLADRAFT_455824 [Serpula lacrymans var.
lacrymans S7.9]
Length = 211
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|353242503|emb|CCA74142.1| probable GTP-binding protein ypt5 [Piriformospora indica DSM
11827]
Length = 204
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|301091283|ref|XP_002895829.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262096540|gb|EEY54592.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 194
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+Q K C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 2 SQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 39/62 (62%), Gaps = 12/62 (19%)
Query: 4 SNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
SNN N RPN Q+KLVLLGESAVGKSSLVLRFV+ F EY+ESTIG
Sbjct: 2 SNNPRPNS-----TRPN-------YQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIG 49
Query: 64 GC 65
Sbjct: 50 AA 51
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+Q K C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 2 SQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL
8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL
8126]
Length = 219
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 54
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 17 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 56
>gi|395334748|gb|EJF67124.1| GTP-binding protein RAB5 [Dichomitus squalens LYAD-421 SS1]
Length = 209
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGA 41
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 42
>gi|308807024|ref|XP_003080823.1| GTP binding protein (ISS) [Ostreococcus tauri]
gi|116059284|emb|CAL54991.1| GTP binding protein (ISS), partial [Ostreococcus tauri]
Length = 200
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLG+ GKSSLVLRFV+GQFHEYQESTIG
Sbjct: 13 QAKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGA 48
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++C +KLVLLG++AVGKS LV+RFVR +F EYQE TIG
Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 43
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P + + Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 7 PGARGNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 53
>gi|320586194|gb|EFW98873.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 219
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 54
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila
ATCC 42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila
ATCC 42464]
Length = 219
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 54
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|171694842|ref|XP_001912345.1| hypothetical protein [Podospora anserina S mat+]
gi|170947663|emb|CAP59825.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 54
>gi|310790093|gb|EFQ25626.1| Ras family protein [Glomerella graminicola M1.001]
Length = 221
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 17 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 56
>gi|336275989|ref|XP_003352748.1| hypothetical protein SMAC_01582 [Sordaria macrospora k-hell]
gi|380094637|emb|CCC08018.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 220
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAA 55
>gi|29841162|gb|AAP06175.1| similar to NM_002868 RAB5B, member RAS oncogene family in Homo
sapiens [Schistosoma japonicum]
Length = 214
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
CQ+KLV+LGESAVGKSS+V+R + QF EYQE+TIG
Sbjct: 6 CQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAA 43
>gi|170084457|ref|XP_001873452.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651004|gb|EDR15244.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 173
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGESAVGKSSLVLRFV+ QF +Y+ESTI
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIAA 41
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 4 SRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
CQ+KLV+LGESAVGKSS+V+R + QF EYQE+TIG
Sbjct: 6 CQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGA 42
>gi|323449295|gb|EGB05184.1| hypothetical protein AURANDRAFT_70339 [Aureococcus
anophagefferens]
Length = 182
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 3 SRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 42
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 4 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 42
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride
IMI 206040]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus
anophagefferens]
Length = 195
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++C +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|400602159|gb|EJP69784.1| RAB GTPase Ypt5 [Beauveria bassiana ARSEF 2860]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+VLRFV+ QF ++ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAA 55
>gi|195476572|ref|XP_002086190.1| GE19467 [Drosophila yakuba]
gi|194185857|gb|EDW99468.1| GE19467 [Drosophila yakuba]
Length = 53
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
G QRPN +Q K ++K VLLGES SLVLRFV+GQFHEYQEST
Sbjct: 11 GTAQRPNATSQNKSGEFKFVLLGES-----SLVLRFVKGQFHEYQEST 53
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
C +KLVLLG++AVGKS LV+RFVR +F+E+QE TIG
Sbjct: 7 CHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGA 43
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q KLVLLG+ GKSSLVLRFV+GQF EYQESTIG
Sbjct: 6 VMQAKLVLLGDMGAGKSSLVLRFVKGQFFEYQESTIGAA 44
>gi|440799681|gb|ELR20725.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 128
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I +KLVLLGES VGKS+LV+RFV+G+F+E+QESTIG
Sbjct: 3 RIRHHKLVLLGESGVGKSTLVIRFVKGKFNEFQESTIGAA 42
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLGESAVGKSS+VLRFV+ QF Y+ESTIG
Sbjct: 16 RFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGA 54
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++C +KLVLLG++AVGKS LV+RFVR +F EYQE TIG
Sbjct: 71 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 109
>gi|290986334|ref|XP_002675879.1| rab family small GTPase [Naegleria gruberi]
gi|284089478|gb|EFC43135.1| rab family small GTPase [Naegleria gruberi]
Length = 880
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC---GNVPGRDR 73
+ +T K YKL+LLG S+ GK++LVLRFVRG F E++ESTIG VP DR
Sbjct: 4 SSKTPPKFVSYKLILLGSSSTGKTNLVLRFVRGYFSEHEESTIGAAFLTQTVPLEDR 60
>gi|321262867|ref|XP_003196152.1| GTPase [Cryptococcus gattii WM276]
gi|317462627|gb|ADV24365.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 199
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
A+ +KLVLLGESAVGKSSLVLRFVR +F +++ESTI
Sbjct: 2 ARTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAA 41
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P A++ +KLVLLG++AVGKS LV+RFVR +F E+QE TIG
Sbjct: 5 PGSAANARVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAA 51
>gi|281206811|gb|EFA80995.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 32 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
LVLLGE+AVGKSSLVLRFVRG F +YQESTIG
Sbjct: 30 LVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGA 62
>gi|70937797|ref|XP_739657.1| GTPase [Plasmodium chabaudi chabaudi]
gi|56516819|emb|CAH89143.1| GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 74
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 6 NSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N N++G+ Q N K+ +KLVLLG+++VGKS +V+RF + +F+EYQESTIGG
Sbjct: 7 NINNDGKYDASQNSNAN---KVFNFKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGG 62
>gi|50557054|ref|XP_505935.1| YALI0F27181p [Yarrowia lipolytica]
gi|49651805|emb|CAG78747.1| YALI0F27181p [Yarrowia lipolytica CLIB122]
Length = 207
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P +Q + Q+KLVLLGES VGKSSLV RFV+ +F E +ESTIG
Sbjct: 4 PRTSSQERFAQFKLVLLGESFVGKSSLVTRFVKDEFLEQRESTIGAA 50
>gi|384252326|gb|EIE25802.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 199
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
I Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 7 IQQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAA 45
>gi|19114819|ref|NP_593907.1| GTPase Ypt5 [Schizosaccharomyces pombe 972h-]
gi|549812|sp|P36586.1|YPT5_SCHPO RecName: Full=GTP-binding protein ypt5
gi|396079|emb|CAA80223.1| ypt5 protein [Schizosaccharomyces pombe]
gi|2389005|emb|CAB11737.1| GTPase Ypt5 [Schizosaccharomyces pombe]
Length = 211
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+SAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAA 50
>gi|303279212|ref|XP_003058899.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460059|gb|EEH57354.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 3 VMQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAA 41
>gi|300175989|emb|CBK22206.2| unnamed protein product [Blastocystis hominis]
Length = 364
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P D + ++ +YK+VLLGE+AVGKSS+V R+VR QF + QESTIG
Sbjct: 4 PQDLSGTQLFKYKIVLLGETAVGKSSIVQRYVRDQFLDNQESTIGA 49
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q+KLVLLGESAVGKSS+V RFV+ F++++ESTIG
Sbjct: 11 KFVQFKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGAA 50
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ + +KLVLLGES+VGKSS+ LRFV+ QF +Y+ESTIG
Sbjct: 2 SSVASFKLVLLGESSVGKSSVALRFVKDQFEDYRESTIGAA 42
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSS+VLRFVRGQF EYQESTIG
Sbjct: 9 KLVLLGDMGAGKSSMVLRFVRGQFFEYQESTIGAA 43
>gi|356511351|ref|XP_003524390.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+T+ K Q KLVLLG+ GK+SLVLRFV+G+F EYQESTIG
Sbjct: 3 RTRNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQESTIGAA 46
>gi|134116396|ref|XP_773152.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255773|gb|EAL18505.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 202
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ +KLVLLGESAVGKSSLVLRFVR +F +++ESTI
Sbjct: 2 SRTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAA 41
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
G R +RP + K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 28 GYRGERPAGEV-PKTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAA 79
>gi|384499235|gb|EIE89726.1| GTP-binding protein ypt5 [Rhizopus delemar RA 99-880]
Length = 161
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q K KLVLLG+S+VGKSSLVLR+V+ QF EY+ESTIG
Sbjct: 5 QQKSYTLKLVLLGDSSVGKSSLVLRYVKDQFDEYRESTIGAA 46
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 10 QAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAA 46
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|357153419|ref|XP_003576446.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 206
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 SKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 49
>gi|255546521|ref|XP_002514320.1| protein with unknown function [Ricinus communis]
gi|223546776|gb|EEF48274.1| protein with unknown function [Ricinus communis]
Length = 199
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ RPN+ K Q KLVLLG+ GK+SLVLRFV+GQF ++QESTIG
Sbjct: 1 MARPNN----KNIQAKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAA 46
>gi|256078263|ref|XP_002575416.1| rab5 [Schistosoma mansoni]
gi|353230409|emb|CCD76580.1| putative rab5 [Schistosoma mansoni]
Length = 198
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LGESAVGKSS+VLR V+ QF EYQE+TIG
Sbjct: 7 HKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAA 42
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 15 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RI N + + Q+KLVLLGESAVGKSS+V RFV+ F +++ESTIG
Sbjct: 31 RIMATNTSPETRFAQFKLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGA 80
>gi|149239626|ref|XP_001525689.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451182|gb|EDK45438.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 234
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 16 IQRPNDQT-QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
IQ N QT + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 4 IQSQNQQTPNPRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAA 54
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|125545158|gb|EAY91297.1| hypothetical protein OsI_12911 [Oryza sativa Indica Group]
gi|125569268|gb|EAZ10783.1| hypothetical protein OsJ_00618 [Oryza sativa Japonica Group]
Length = 139
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|68481999|ref|XP_715017.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436619|gb|EAK95978.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238878219|gb|EEQ41857.1| GTP-binding protein ypt5 [Candida albicans WO-1]
Length = 221
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N Q+ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 NKQSNQRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 47
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|414869112|tpg|DAA47669.1| TPA: putative GTP-binding protein [Zea mays]
Length = 140
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 48
>gi|116779293|gb|ABK21222.1| unknown [Picea sitchensis]
gi|116790907|gb|ABK25786.1| unknown [Picea sitchensis]
Length = 200
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KLVLLG+ GKSSLVLRFV+GQF +YQESTIG
Sbjct: 10 QAKLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGAA 46
>gi|294950399|ref|XP_002786610.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239900902|gb|EER18406.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 226
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T + +KLVLLG+++VGKS +V+RF RG+F+EYQE TIG
Sbjct: 16 TPLTVLHHKLVLLGDASVGKSCMVVRFARGEFYEYQEPTIGAA 58
>gi|256078265|ref|XP_002575417.1| rab5 [Schistosoma mansoni]
gi|353230408|emb|CCD76579.1| putative rab5 [Schistosoma mansoni]
Length = 179
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LGESAVGKSS+VLR V+ QF EYQE+TIG
Sbjct: 7 HKLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAA 42
>gi|241950447|ref|XP_002417946.1| RAB family GTPase, putative [Candida dubliniensis CD36]
gi|223641284|emb|CAX45664.1| RAB family GTPase, putative [Candida dubliniensis CD36]
Length = 221
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N Q+ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 NKQSNQRFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 47
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 9 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 48
>gi|326491951|dbj|BAJ98200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 SKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 52
>gi|149392024|gb|ABR25897.1| ras-related protein rhn1 [Oryza sativa Indica Group]
Length = 115
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|4741844|gb|AAD28731.1|AF112964_1 small GTP-binding protein [Triticum aestivum]
Length = 209
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 SKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAA 52
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAA 80
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q KLVLLG+ GKSSLVLRFV+GQF YQESTIG
Sbjct: 7 KNVQAKLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAA 46
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAA 80
>gi|388581691|gb|EIM21998.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 204
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+KLVLLGESAVGKSS+VLRFV+ QF E +ESTIG
Sbjct: 7 FKLVLLGESAVGKSSIVLRFVKQQFAEDRESTIGA 41
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 201
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T A Q KLVLLG+ GKSSL LRFVRGQF +YQESTIG
Sbjct: 4 TGANHTQAKLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAA 46
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K +KLVLLG+++VGKS LV+RF + +F+EYQESTIG
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAA 80
>gi|71033037|ref|XP_766160.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353117|gb|EAN33877.1| GTP-binding protein rab5, putative [Theileria parva]
Length = 270
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 4 SNNSNSNGRGGRIQRPND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
S + NG+ P+D +++ + Q+KLV+LG+++VGKS LV RFV+ F E+QESTI
Sbjct: 11 SPSEGGNGKEATNSSPSDSKSKNPVYQFKLVILGDASVGKSCLVGRFVKNTFMEFQESTI 70
Query: 63 G 63
G
Sbjct: 71 G 71
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 53 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 92
>gi|358055034|dbj|GAA98803.1| hypothetical protein E5Q_05491 [Mixia osmundae IAM 14324]
Length = 198
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLVLLGESA GKSSLVL+FV+ +F EY+ESTIG
Sbjct: 7 FKLVLLGESACGKSSLVLQFVKQEFSEYRESTIGAA 42
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|224070895|ref|XP_002303285.1| predicted protein [Populus trichocarpa]
gi|222840717|gb|EEE78264.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q KLVLLG+ GK+SLVLRFV+GQF ++QE TIG
Sbjct: 7 KIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGAA 46
>gi|195643312|gb|ACG41124.1| ras-related protein RHN1 [Zea mays]
Length = 203
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|412993473|emb|CCO13984.1| unknown [Bathycoccus prasinos]
Length = 208
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 14 QAKLVLLGDMGAGKSSLVLRFVKGQFFEHQESTIGAA 50
>gi|392578003|gb|EIW71131.1| hypothetical protein TREMEDRAFT_27089 [Tremella mesenterica DSM
1558]
Length = 198
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGESAVGKSSLVLRFVR +F +++ESTI
Sbjct: 8 KLVLLGESAVGKSSLVLRFVRNEFSDFRESTIAA 41
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 201
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T A Q KLVLLG+ GKSSL LRFV+GQF +YQESTIG
Sbjct: 4 TGANHMQAKLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAA 46
>gi|50306401|ref|XP_453174.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642308|emb|CAH00270.1| KLLA0D02376p [Kluyveromyces lactis]
Length = 207
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F EY+ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEYRESTIGAA 39
>gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]
Length = 211
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGESAVGKSS+VL+FV+ QF E++ESTIG
Sbjct: 17 KLVLLGESAVGKSSIVLQFVKKQFDEWRESTIGAA 51
>gi|403161720|ref|XP_003322028.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171898|gb|EFP77609.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 285
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+PN T K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 12 KPNPSTDGKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 58
>gi|297738167|emb|CBI27368.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|224134314|ref|XP_002321789.1| predicted protein [Populus trichocarpa]
gi|222868785|gb|EEF05916.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 46
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 46
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGTGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|12651646|gb|AAA18558.2| putative. similar to GTP-binding proteins [Zea mays]
Length = 70
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 3 KIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 42
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 46
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 46
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|225445266|ref|XP_002284542.1| PREDICTED: ras-related protein RHN1 isoform 1 [Vitis vinifera]
gi|359484588|ref|XP_003633124.1| PREDICTED: ras-related protein RHN1 isoform 2 [Vitis vinifera]
gi|297738837|emb|CBI28082.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q KLVLLG+ GK+SLVLRFV+GQF+++QESTIG
Sbjct: 7 KNIQAKLVLLGDMGTGKTSLVLRFVKGQFYDFQESTIGAA 46
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 30/38 (78%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q KLVLLG+ GK+SLVLRFV+GQF E+QESTIG
Sbjct: 9 IQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAA 46
>gi|108863008|gb|ABA99930.2| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KI KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGA 46
>gi|344302341|gb|EGW32646.1| hypothetical protein SPAPADRAFT_61705 [Spathaspora passalidarum
NRRL Y-27907]
Length = 223
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q+KLVLLGESAVGKSS+V RFV+ F E +ESTIG
Sbjct: 7 SRFAQFKLVLLGESAVGKSSIVHRFVKNTFDELRESTIGAA 47
>gi|260949137|ref|XP_002618865.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC
42720]
gi|238846437|gb|EEQ35901.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC
42720]
Length = 221
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 11 SETRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAA 53
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI K+VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KIRNAKVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 47
>gi|448535070|ref|XP_003870898.1| Ypt52 protein [Candida orthopsilosis Co 90-125]
gi|380355254|emb|CCG24771.1| Ypt52 protein [Candida orthopsilosis]
Length = 225
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
D + + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 7 DTSAQRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGAA 51
>gi|367004961|ref|XP_003687213.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS
4417]
gi|357525516|emb|CCE64779.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS
4417]
Length = 208
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVYRFVKDSFDEFRESTIGA 38
>gi|255728925|ref|XP_002549388.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
gi|240133704|gb|EER33260.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
Length = 207
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 9 KFSQFKLVLLGESAVGKSSIVHRFVKNSFDDLRESTIGAA 48
>gi|150951304|ref|XP_001387608.2| GTP-binding protein of the rab/ypt family [Scheffersomyces
stipitis CBS 6054]
gi|149388482|gb|EAZ63585.2| GTP-binding protein of the rab/ypt family, partial
[Scheffersomyces stipitis CBS 6054]
Length = 212
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 3 KFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 41
>gi|328766761|gb|EGF76814.1| hypothetical protein BATDEDRAFT_37534 [Batrachochytrium
dendrobatidis JAM81]
Length = 245
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N Q+ K Q KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 27 NAQSNLKPIQVKLVLLGEAAVGKSSLVLRFVNNEFQENKEPTIGA 71
>gi|356527789|ref|XP_003532489.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q KLVLLG+ GK+SLVLRFV+G+F EYQ+STIG
Sbjct: 7 KSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQDSTIGAA 46
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLV+RFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAA 46
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MFQFKLVLLGDSSVGKSSIVYRFVKNSFDEFRESTIGA 38
>gi|255639786|gb|ACU20186.1| unknown [Glycine max]
Length = 233
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
C + VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 42 CSFHQVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGA 78
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLV+RFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAA 46
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K KLVLLG+++VGKS LV+RF + +FHEYQE TIG
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAA 49
>gi|84998852|ref|XP_954147.1| Rab5 GTPase [Theileria annulata]
gi|65305145|emb|CAI73470.1| Rab5 GTPase, putative [Theileria annulata]
Length = 255
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAK----ICQYKLVLLGESAVGKSSLVLRFVRGQFHE 56
+ NS S S G G+ + + +K + Q+KLV+LG+++VGKS LV RFV+ F E
Sbjct: 5 LINSFVSPSEGGNGKESTNSSHSDSKSKNPVYQFKLVILGDASVGKSCLVGRFVKNTFME 64
Query: 57 YQESTIGG 64
+QESTIG
Sbjct: 65 FQESTIGA 72
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K KLVLLG+++VGKS LV+RF + +FHEYQE TIG
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAA 49
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSL+LRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGAA 46
>gi|255550727|ref|XP_002516412.1| protein with unknown function [Ricinus communis]
gi|223544447|gb|EEF45967.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 46
>gi|392579448|gb|EIW72575.1| hypothetical protein TREMEDRAFT_66953 [Tremella mesenterica DSM
1558]
Length = 246
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
D+T K Q KLVLLGE+AVGKSSLVLRFV+ F+E TIG
Sbjct: 3 DETPMKAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGA 46
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
++N NNS+ GG N KI KLVLLG+++VGKS +V+RF + +F+EYQES
Sbjct: 5 LSNLNNSDKYD-GGSNYHSN-----KIFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQES 58
Query: 61 TIGG 64
TIG
Sbjct: 59 TIGA 62
>gi|448083219|ref|XP_004195336.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359376758|emb|CCE87340.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGA 51
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAA 39
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 12 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 46
>gi|255550050|ref|XP_002516076.1| protein with unknown function [Ricinus communis]
gi|223544981|gb|EEF46496.1| protein with unknown function [Ricinus communis]
Length = 161
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I Q KLVLLG+ GK+SLVLRFV+GQF ++QE TIG
Sbjct: 7 RIIQAKLVLLGDVGTGKTSLVLRFVKGQFFDHQEPTIGAA 46
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAA 42
>gi|448087841|ref|XP_004196426.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359377848|emb|CCE86231.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNSFDDMRESTIGA 51
>gi|156841129|ref|XP_001643940.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114570|gb|EDO16082.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 38
>gi|45184648|ref|NP_982366.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|44979994|gb|AAS50190.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|374105564|gb|AEY94475.1| FAAL176Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAA 39
>gi|344230490|gb|EGV62375.1| GTP-binding protein of the rab/ypt family [Candida tenuis ATCC
10573]
Length = 218
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLGESAVGKSS+V RFV+ F ++ESTIG
Sbjct: 9 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDNFRESTIGA 47
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 23 TKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 23 TKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|302654746|ref|XP_003019172.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
gi|291182879|gb|EFE38527.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
Length = 211
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P +T A+ Q+KLVLLG KSSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLG-----KSSLVLRFVKDQFDDYRESTIGAA 47
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGA 62
>gi|50411080|ref|XP_457015.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
gi|49652680|emb|CAG85000.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
Length = 224
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLGESAVGKSS+V RFV+ F +ESTIG
Sbjct: 13 RFAQFKLVLLGESAVGKSSIVHRFVKNTFDNMRESTIGAA 52
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ + Q+KLVLLGESAVGKSS+V RFV F + +ESTIG
Sbjct: 8 EPRFAQFKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAA 49
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 48
>gi|218184610|gb|EEC67037.1| hypothetical protein OsI_33775 [Oryza sativa Indica Group]
Length = 263
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 2 ANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
++S +N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T
Sbjct: 54 SSSLPANNAGGVGTISNENSGTDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT 113
Query: 62 IGG 64
+G
Sbjct: 114 VGA 116
>gi|389581882|dbj|GAB64603.1| small GTPase Rab5c, partial [Plasmodium cynomolgi strain B]
Length = 144
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
PN + K+ KLVLLG+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 18 PNYHSN-KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAA 63
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKS LVLRFV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSGLVLRFVKGQFLEFQESTIGAA 46
>gi|354548327|emb|CCE45063.1| hypothetical protein CPAR2_700670 [Candida parapsilosis]
Length = 231
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q + Q + Q+KLVLLGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 7 QGDSSSAQQRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGA 54
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAA 39
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b;
AltName: Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
Length = 200
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV+ F EY+E TIG
Sbjct: 6 KPVQVKLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGA 44
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|222612895|gb|EEE51027.1| hypothetical protein OsJ_31672 [Oryza sativa Japonica Group]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 2 ANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
++S +N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T
Sbjct: 55 SSSLPANNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT 114
Query: 62 IGG 64
+G
Sbjct: 115 VGA 117
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a;
AltName: Full=Ras-related protein Rab5A; Short=AtRab5A;
AltName: Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|405960207|gb|EKC26148.1| Ras-related protein Rab-5B [Crassostrea gigas]
Length = 818
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
M+++ N G + + + K Q KLVLLGES VGKSS+ LRFVRG+F+E E+
Sbjct: 557 MSSAKRPNGRASGPPVGGARNGPEGKSKQIKLVLLGESGVGKSSIALRFVRGEFNENGEA 616
Query: 61 TIGG 64
TIG
Sbjct: 617 TIGA 620
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAA 39
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 6 KTTSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAA 45
>gi|297841033|ref|XP_002888398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334239|gb|EFH64657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+KLVLLG++AVGKS LV+RFVR +F +QE TIG
Sbjct: 7 HFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGA 42
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T+ Q+K+VLLG+S+VGKSS+VLR +G++ E+QE+TIG
Sbjct: 2 TEGNTYQFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGA 43
>gi|297812585|ref|XP_002874176.1| hypothetical protein ARALYDRAFT_326708 [Arabidopsis lyrata subsp.
lyrata]
gi|297320013|gb|EFH50435.1| hypothetical protein ARALYDRAFT_326708 [Arabidopsis lyrata subsp.
lyrata]
Length = 103
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|297849916|ref|XP_002892839.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338681|gb|EFH69098.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSLVL FV+GQF E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGAA 46
>gi|403220992|dbj|BAM39125.1| Rab5 GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCG 66
I Q+KLV+LG++ VGKS LV RFV+ F E+QESTIGG
Sbjct: 31 IYQFKLVILGDTFVGKSCLVGRFVKNSFMEFQESTIGGTA 70
>gi|365983882|ref|XP_003668774.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS
421]
gi|343767541|emb|CCD23531.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS
421]
Length = 227
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAA 39
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ T Q+KLV+LG+++VGKSSLV RFV+ F E+QESTIG
Sbjct: 23 DESTGHSFYQFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAA 68
>gi|363754579|ref|XP_003647505.1| hypothetical protein Ecym_6309 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891142|gb|AET40688.1| hypothetical protein Ecym_6309 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T +CQ KLVLLGES+VGKSS+V RF G+FH+ Q +TIG
Sbjct: 1 MTAEYVCQLKLVLLGESSVGKSSIVTRFTTGEFHKNQ-ATIGA 42
>gi|386783959|gb|AFJ24874.1| RAB like-1 [Schmidtea mediterranea]
Length = 136
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+K+VLLGE++VGKSSL LRFV+ F+E QE TIGG
Sbjct: 6 QFKVVLLGETSVGKSSLSLRFVKDYFNEVQEITIGG 41
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS
4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS
4309]
Length = 216
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAA 39
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
A + Q+KLVLLG+S+VGKSS+V RFV+ F E++ESTIG
Sbjct: 21 ATMLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGA 60
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 9 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++GR G + N +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 11 ASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|254573032|ref|XP_002493625.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|238033424|emb|CAY71446.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|328354547|emb|CCA40944.1| Ras-like GTP-binding protein YPT1 [Komagataella pastoris CBS
7435]
Length = 218
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 6 QITAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAA 39
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 5 QITPVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 44
>gi|410083613|ref|XP_003959384.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS
2517]
gi|372465975|emb|CCF60249.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS
2517]
Length = 209
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 ITSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|357521023|ref|XP_003630800.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355524822|gb|AET05276.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 190
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 33 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
VLLG+ GK+SLVLRFV+GQF EYQESTIG
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAA 37
>gi|159477721|ref|XP_001696957.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274869|gb|EDP00649.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE GKSSLVLR+V+GQF +YQ ST+G
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAA 49
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ RP++ K Q KLVL+G+ GK+SLVLRFV+GQF E+QE TIG
Sbjct: 1 MARPSN----KNIQAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGAA 46
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
QYKLVLLGE+AVGKS L RF + F +YQ+STIG
Sbjct: 47 QYKLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGA 82
>gi|302833012|ref|XP_002948070.1| RabF/Rab5 [Volvox carteri f. nagariensis]
gi|300266872|gb|EFJ51058.1| RabF/Rab5 [Volvox carteri f. nagariensis]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE GKSSLVLR+V+GQF +YQ ST+G
Sbjct: 15 KLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAA 49
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS
6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS
6284]
Length = 220
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGA 38
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium
distachyon]
Length = 200
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MANSNNSNSNGRGG--RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 58
M S++ +N GG I N T +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCSSSLPANNAGGLSNINNENSATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 59 ESTIGG 64
+ T+G
Sbjct: 61 KVTVGA 66
>gi|50291301|ref|XP_448083.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527394|emb|CAG61034.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 ITSLKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|343426796|emb|CBQ70324.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Sporisorium reilianum SRZ2]
Length = 268
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 21 KPYQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAA 60
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 7 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+N+ G G I N T K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 60 ANNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 117
>gi|313211770|emb|CBY15948.1| unnamed protein product [Oikopleura dioica]
Length = 80
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
KI Q+KLVL GE+AVGKSSLVLRFV+G+F +
Sbjct: 10 KIIQFKLVLFGEAAVGKSSLVLRFVKGEFKVF 41
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 7 VTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 3 QHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 46
>gi|388520843|gb|AFK48483.1| unknown [Lotus japonicus]
Length = 210
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q KLVLLG+ GK+SL LRFV+GQF+ QE T+G
Sbjct: 7 KIIQAKLVLLGDMGTGKTSLALRFVKGQFYPNQEPTVGAA 46
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 7 VTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|358059194|dbj|GAA95133.1| hypothetical protein E5Q_01788 [Mixia osmundae IAM 14324]
Length = 261
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
G +QRP Q KLVLLG +AVGKSS+VLRFV+ F E +E TIG
Sbjct: 2 AEAGAVQRP--------VQVKLVLLGAAAVGKSSVVLRFVQNDFQENKEPTIGA 47
>gi|297853616|ref|XP_002894689.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340531|gb|EFH70948.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 32 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
LVLLG+ GKSSLVLRFV+ QF E+QESTIG
Sbjct: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein
sorting-associated protein, putative; vacuolar
protein-targeting protein, putative [Candida
dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
Q A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 3 QHPAPATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 46
>gi|357454979|ref|XP_003597770.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355486818|gb|AES68021.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 229
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ RP + KI Q KLVLLG+ GK+SL LRFV+GQF + QE TIG
Sbjct: 1 MSRPGN----KIIQAKLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGA 45
>gi|116191911|ref|XP_001221768.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181586|gb|EAQ89054.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 204
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCG-----NVPGR 71
KLVLLGE+AVGKSSLVLRFV F E +E TIG N+P R
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTR 59
>gi|146417699|ref|XP_001484817.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
gi|146390290|gb|EDK38448.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q+KLVLLGESAVGKSS+V RFV+ F +ESTIG
Sbjct: 6 RFAQFKLVLLGESAVGKSSVVHRFVKNTFDNMRESTIGA 44
>gi|328856662|gb|EGG05782.1| hypothetical protein MELLADRAFT_77996 [Melampsora larici-populina
98AG31]
Length = 277
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 19 PND-QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
PN Q ++ Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 8 PNKPQVDSRPVQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 54
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida
tropicalis MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida
tropicalis MYA-3404]
Length = 205
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV +F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAA 46
>gi|425765692|gb|EKV04360.1| RAB GTPase Ypt5, putative [Penicillium digitatum Pd1]
gi|425779183|gb|EKV17266.1| RAB GTPase Ypt5, putative [Penicillium digitatum PHI26]
Length = 242
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 20/60 (33%)
Query: 25 AKICQYKLVLLGESAVGK--------------------SSLVLRFVRGQFHEYQESTIGG 64
A+ Q+KLVLLGESAVGK SSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKVWDTTCDLLLSAADLTAIFQSSLVLRFVKDQFDDYRESTIGA 72
>gi|353236709|emb|CCA68698.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Piriformospora indica DSM 11827]
Length = 252
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+D TQ I Q KLVLLGE+AVGKSS+V+RFV +F +E TIG
Sbjct: 5 SDATQKPI-QVKLVLLGEAAVGKSSVVMRFVNNEFQANKEPTIGA 48
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 33 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
VLLG+ GKSSLVLRFV+GQF E+QESTIG
Sbjct: 1 VLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAA 33
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC
42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC
42720]
Length = 213
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 28/41 (68%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 5 APATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|444315776|ref|XP_004178545.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS
6284]
gi|387511585|emb|CCH59026.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS
6284]
Length = 212
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 2 ANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
++S + S G I N T +K + KLVLLG+S VGKS +VLRFVRGQF + T
Sbjct: 4 SSSVPARSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT 63
Query: 62 IGG 64
+G
Sbjct: 64 VGA 66
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 2 ANSNNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
++S + S G I N T +K + KLVLLG+S VGKS +VLRFVRGQF + T
Sbjct: 4 SSSVPARSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT 63
Query: 62 IGG 64
+G
Sbjct: 64 VGA 66
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|307105820|gb|EFN54068.1| hypothetical protein CHLNCDRAFT_25172 [Chlorella variabilis]
Length = 167
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++ Q KLVLLGE GK+SLV RFVRGQ+ E QESTIG
Sbjct: 4 QLVQSKLVLLGEMGSGKTSLVQRFVRGQYFENQESTIGAS 43
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K KLVLLG+++VGKS LV+RF + +F EYQE TIG
Sbjct: 10 KTYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGA 48
>gi|443919122|gb|ELU39380.1| Ras domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 360
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 18/70 (25%)
Query: 8 NSNGRGGRIQRP-------------NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQF 54
NS+ R G++ R + ++ QYKLVLLGESAVGKSSLV+RFV+G
Sbjct: 212 NSHERFGKLTRAVQLQHLVIEADDSKETNMSRQLQYKLVLLGESAVGKSSLVIRFVKG-- 269
Query: 55 HEYQESTIGG 64
ESTIG
Sbjct: 270 ---MESTIGA 276
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 28/41 (68%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 6 APATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 46
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K VLLG+ GKSSLVLRFV+GQF E+Q STIG
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQVSTIGAA 42
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS
2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS
2517]
Length = 207
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q+KLVLLG+S+VGKSS+V RFV+ F + +ESTIG
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAA 39
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|385303401|gb|EIF47476.1| putative rab family gtp-binding protein [Dekkera bruxellensis
AWRI1499]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFEENKEPTIGAA 46
>gi|448535786|ref|XP_003871017.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis Co 90-125]
gi|380355373|emb|CCG24891.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis]
Length = 223
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 47
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|354548461|emb|CCE45197.1| hypothetical protein CPAR2_702090 [Candida parapsilosis]
Length = 228
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 47
>gi|255936341|ref|XP_002559197.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583817|emb|CAP91837.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 220
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 25 AKICQYKLVLLGE--SAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLL +A+ +SSLVLRFV+ QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLATDLTAIFQSSLVLRFVKDQFDDYRESTIGAA 55
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS
4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS
4309]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|389639440|ref|XP_003717353.1| vacuolar protein sorting-associated protein 21 [Magnaporthe
oryzae 70-15]
gi|351643172|gb|EHA51034.1| vacuolar protein sorting-associated protein 21 [Magnaporthe
oryzae 70-15]
gi|440465364|gb|ELQ34687.1| vacuolar protein sorting-associated protein 21 [Magnaporthe
oryzae Y34]
gi|440490989|gb|ELQ70478.1| vacuolar protein sorting-associated protein 21 [Magnaporthe
oryzae P131]
Length = 238
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC-----GNVPGR 71
KLVLLGE+AVGKSSLVLRFV F E +E TIG N+P R
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPAR 58
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 43
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC
10573]
Length = 213
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 45
>gi|296416275|ref|XP_002837806.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633689|emb|CAZ81997.1| unnamed protein product [Tuber melanosporum]
Length = 219
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNDDFQENKEPTIGA 48
>gi|367012131|ref|XP_003680566.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
gi|359748225|emb|CCE91355.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
I KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 ITSVKLVLLGEAAVGKSSIVLRFVSNDFTENKEPTIGAA 43
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 30/43 (69%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ Q K + K+VLLG++ VGKSSLVLRFV F Y ESTIG
Sbjct: 3 ENQVKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGA 45
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 209
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 43
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 43
>gi|45185604|ref|NP_983320.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|44981322|gb|AAS51144.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|374106525|gb|AEY95434.1| FACL084Cp [Ashbya gossypii FDAG1]
Length = 207
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|320581319|gb|EFW95540.1| Rab5-like GTPase [Ogataea parapolymorpha DL-1]
Length = 211
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+K KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 2 SKQTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAA 42
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|345570560|gb|EGX53381.1| hypothetical protein AOL_s00006g247 [Arthrobotrys oligospora ATCC
24927]
Length = 247
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCG-----NVPGR 71
KLVLLGE+AVGKSSLVLRFV F E +E TIG N+P R
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNDDFQENREPTIGAAFLTQKCNLPSR 58
>gi|393240302|gb|EJD47829.1| GTP-binding protein ypt5 [Auricularia delicata TFB-10046 SS5]
Length = 255
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 7 TADKSIQVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGA 48
>gi|396493770|ref|XP_003844142.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
gi|312220722|emb|CBY00663.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
Length = 387
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCG-----NVPGR 71
KLVLLGE+AVGKSSLV+RFV F E +E TIG N+P R
Sbjct: 159 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPTR 204
>gi|351721304|ref|NP_001236437.1| uncharacterized protein LOC100305769 [Glycine max]
gi|255626561|gb|ACU13625.1| unknown [Glycine max]
Length = 203
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 7 SNSNGRGGR-IQRPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQEST 61
S+ RG R + RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T
Sbjct: 5 SSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT 64
Query: 62 IGG 64
+G
Sbjct: 65 VGA 67
>gi|255577452|ref|XP_002529605.1| protein with unknown function [Ricinus communis]
gi|223530938|gb|EEF32797.1| protein with unknown function [Ricinus communis]
Length = 224
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 10/60 (16%)
Query: 5 NNSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
NNS++NG + AK + KLVLLG+S VGKS +VLRFVRGQF + TIG
Sbjct: 19 NNSDNNGV----------SDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGA 68
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 11 GRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
R G QR + + Q QYKLVL+GE+ VGKSSL +++VRG+F + ++TIG
Sbjct: 2 SRNGSTQRYDKRPQR--FQYKLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGAA 54
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|406860585|gb|EKD13643.1| Rab5-like protein ypt51 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 43
>gi|254580657|ref|XP_002496314.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
gi|238939205|emb|CAR27381.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
Length = 211
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ + KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 3 SSVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAA 43
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 5 LTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 43
>gi|226289136|gb|EEH44648.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 291
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|225681970|gb|EEH20254.1| GTPase [Paracoccidioides brasiliensis Pb03]
Length = 290
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|403350953|gb|EJY74956.1| hypothetical protein OXYTRI_03663 [Oxytricha trifallax]
Length = 456
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+P +Q+++ + K+VLLG+S VGKSS+ RF RG F + + TIGG
Sbjct: 250 KPKSSSQSQLIEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIGGA 297
>gi|58261772|ref|XP_568296.1| GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134118345|ref|XP_772186.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254794|gb|EAL17539.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230469|gb|AAW46779.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 252
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|365758696|gb|EHN00526.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 220
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGESAVGKSS+VLRF+ F E +E TIG
Sbjct: 14 KLVLLGESAVGKSSIVLRFISNDFTESREPTIGAA 48
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+KLVLLG++AVGKSS V RFV+ +F E+Q+ TIG
Sbjct: 9 FKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGA 43
>gi|401837860|gb|EJT41716.1| YPT53-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLGESAVGKSS+VLRF+ F E +E TIG
Sbjct: 14 KLVLLGESAVGKSSIVLRFISNDFTESREPTIGAA 48
>gi|406693962|gb|EKC97301.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 241
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSSLVLRFV+ F+E TIG
Sbjct: 7 KAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGA 45
>gi|403350833|gb|EJY74890.1| hypothetical protein OXYTRI_03728 [Oxytricha trifallax]
Length = 247
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+P +Q+++ + K+VLLG+S VGKSS+ RF RG F + + TIGG
Sbjct: 41 KPKSSSQSQLIEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIGGA 88
>gi|349580845|dbj|GAA26004.1| K7_Ypt53p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|255630597|gb|ACU15658.1| unknown [Glycine max]
Length = 204
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 18 RPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 17 RPNSENGGGQDAKDLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|19880892|gb|AAM00540.1|AF458973_1 YPT53 [Saccharomyces cerevisiae]
gi|19880899|gb|AAM00546.1|AF458974_1 YPT53 [Saccharomyces cerevisiae]
gi|256270260|gb|EEU05478.1| Ypt53p [Saccharomyces cerevisiae JAY291]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|403331478|gb|EJY64688.1| hypothetical protein OXYTRI_15272 [Oxytricha trifallax]
Length = 247
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+P +Q+++ + K+VLLG+S VGKSS+ RF RG F + + TIGG
Sbjct: 41 KPKSSSQSQLIEAKIVLLGDSGVGKSSIAQRFCRGIFQDTHDVTIGGA 88
>gi|323346892|gb|EGA81171.1| Ypt53p [Saccharomyces cerevisiae Lalvin QA23]
Length = 182
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|320593406|gb|EFX05815.1| rab GTPase vps21 [Grosmannia clavigera kw1407]
Length = 240
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 46
>gi|323303236|gb|EGA57034.1| Ypt53p [Saccharomyces cerevisiae FostersB]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|398364899|ref|NP_014306.3| Ypt53p [Saccharomyces cerevisiae S288c]
gi|549797|sp|P36019.1|YPT53_YEAST RecName: Full=GTP-binding protein YPT53
gi|19880864|gb|AAM00516.1|AF458969_1 YPT53 [Saccharomyces cerevisiae]
gi|19880871|gb|AAM00522.1|AF458970_1 YPT53 [Saccharomyces cerevisiae]
gi|19880878|gb|AAM00528.1|AF458971_1 YPT53 [Saccharomyces cerevisiae]
gi|19880885|gb|AAM00534.1|AF458972_1 YPT53 [Saccharomyces cerevisiae]
gi|19880906|gb|AAM00552.1|AF458975_1 YPT53 [Saccharomyces cerevisiae]
gi|19880913|gb|AAM00558.1|AF458976_1 YPT53 [Saccharomyces cerevisiae]
gi|19880920|gb|AAM00564.1|AF458977_1 YPT53 [Saccharomyces cerevisiae]
gi|19880927|gb|AAM00570.1|AF458978_1 YPT53 [Saccharomyces cerevisiae]
gi|19880934|gb|AAM00576.1|AF458979_1 YPT53 [Saccharomyces cerevisiae]
gi|19880941|gb|AAM00582.1|AF458980_1 YPT53 [Saccharomyces cerevisiae]
gi|19880948|gb|AAM00588.1|AF458981_1 YPT53 [Saccharomyces cerevisiae]
gi|483436|emb|CAA53771.1| ypt53p [Saccharomyces cerevisiae]
gi|758295|emb|CAA59824.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1301998|emb|CAA95969.1| YPT53 [Saccharomyces cerevisiae]
gi|45270730|gb|AAS56746.1| YNL093W [Saccharomyces cerevisiae]
gi|71064107|gb|AAZ22515.1| Ypt53p [Saccharomyces cerevisiae]
gi|151944442|gb|EDN62720.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190409081|gb|EDV12346.1| GTP-binding protein YPT53 [Saccharomyces cerevisiae RM11-1a]
gi|207341718|gb|EDZ69697.1| YNL093Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149269|emb|CAY82511.1| Ypt53p [Saccharomyces cerevisiae EC1118]
gi|285814559|tpg|DAA10453.1| TPA: Ypt53p [Saccharomyces cerevisiae S288c]
gi|323335804|gb|EGA77083.1| Ypt53p [Saccharomyces cerevisiae Vin13]
gi|365763318|gb|EHN04847.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392296898|gb|EIW07999.1| Ypt53p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 220
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS
4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS
4417]
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+V+RFV F E +E TIG
Sbjct: 5 VASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAA 43
>gi|238577909|ref|XP_002388536.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
gi|215449908|gb|EEB89466.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
Length = 243
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 35 LGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
LGESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 51 LGESAVGKSSLVLRFVKDQFDDYRESTIGA 80
>gi|28866038|emb|CAD26971.1| Rab-related small GTP-binding protein [Simmondsia chinensis]
Length = 200
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+ GKSSL+L FV+G F E+QESTIG
Sbjct: 12 KLVLLGDMGAGKSSLLLLFVKGHFLEFQESTIGAA 46
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGE+AVGKSS+VLRFV F E +E TIG
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAA 39
>gi|321265069|ref|XP_003197251.1| GTPase [Cryptococcus gattii WM276]
gi|317463730|gb|ADV25464.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 253
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|405123574|gb|AFR98338.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 254
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ K Q KLVLLGE+AVGKSSLVLRF G F E TIG
Sbjct: 3 EEAPVKAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGA 46
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
D +K + K+VLLG++ VGKSSLVLRFV F Y ESTIG
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGA 46
>gi|440636052|gb|ELR05971.1| rab family, other [Geomyces destructans 20631-21]
Length = 236
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC-----GNVPGR 71
KLVLLGE+AVGKSSLVLRFV F E +E TIG N+P R
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSR 61
>gi|237840525|ref|XP_002369560.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
gi|95007266|emb|CAJ20486.1| Rab5B protein, putative [Toxoplasma gondii RH]
gi|211967224|gb|EEB02420.1| GTP-binding protein, putative [Toxoplasma gondii ME49]
gi|221503433|gb|EEE29131.1| RAB-33, putative [Toxoplasma gondii VEG]
Length = 228
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ K+VLLG+S VGKSSL LRF RG+F +Y E TIG
Sbjct: 37 EAKIVLLGDSGVGKSSLALRFCRGRFPQYHEVTIGA 72
>gi|358337585|dbj|GAA55947.1| hypothetical protein CLF_109434 [Clonorchis sinensis]
Length = 499
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGN 67
+LVLLGES VGKS++VL FV+ F E QE+TI C N
Sbjct: 203 ELVLLGESTVGKSNMVLSFVKAHFSELQEATIAVCQN 239
>gi|302410697|ref|XP_003003182.1| vacuolar protein sorting-associated protein [Verticillium
albo-atrum VaMs.102]
gi|261358206|gb|EEY20634.1| vacuolar protein sorting-associated protein [Verticillium
albo-atrum VaMs.102]
Length = 246
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/34 (76%), Positives = 28/34 (82%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIGG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGG 49
>gi|356576246|ref|XP_003556244.1| PREDICTED: ras-related protein RABF1 [Glycine max]
Length = 200
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 18 RPNDQT----QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
RPN + AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 17 RPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|336374082|gb|EGO02419.1| hypothetical protein SERLA73DRAFT_175933 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387008|gb|EGO28153.1| hypothetical protein SERLADRAFT_458592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 259
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 12 SKSVQVKLVLLGEAAVGKSSVVLRFVTNEFQSNKEPTIGA 51
>gi|327356231|gb|EGE85088.1| GTP-binding protein YPT52 [Ajellomyces dermatitidis ATCC 18188]
Length = 287
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|388851463|emb|CCF54865.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Ustilago hordei]
Length = 270
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 26 QTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 61
>gi|323331955|gb|EGA73367.1| Ypt53p [Saccharomyces cerevisiae AWRI796]
Length = 131
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|239607311|gb|EEQ84298.1| GTP-binding protein YPT52 [Ajellomyces dermatitidis ER-3]
Length = 289
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|261200689|ref|XP_002626745.1| GTP-binding protein YPT52 [Ajellomyces dermatitidis SLH14081]
gi|239593817|gb|EEQ76398.1| GTP-binding protein YPT52 [Ajellomyces dermatitidis SLH14081]
Length = 289
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|405122680|gb|AFR97446.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 9/49 (18%)
Query: 25 AKICQYKLVLLG---------ESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ +KLVLLG ESAVGKSSLVLRFVR +F +++ESTI
Sbjct: 2 SRTTSFKLVLLGQYWLSLAFRESAVGKSSLVLRFVRNEFSDFRESTIAA 50
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++ T Q++LV+LG+++VGKSSL RFVR F E+QESTIG
Sbjct: 9 DESTGHSFYQFELVILGDTSVGKSSLDGRFVRNTFLEFQESTIGA 53
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
D +K + K+VLLG++ VGKSSLVLRFV F Y ESTIG
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGA 46
>gi|13177618|gb|AAK14836.1| GTP-binding protein RAB5c [Mus musculus]
Length = 49
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 23/24 (95%)
Query: 41 GKSSLVLRFVRGQFHEYQESTIGG 64
GKSSLVLRFV+GQFHEYQESTIG
Sbjct: 1 GKSSLVLRFVKGQFHEYQESTIGA 24
>gi|367050914|ref|XP_003655836.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL
8126]
gi|347003100|gb|AEO69500.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL
8126]
Length = 233
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|326432225|gb|EGD77795.1| Rab5c [Salpingoeca sp. ATCC 50818]
Length = 198
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG S VGKSSLVLRFVR +F ++ E T+G
Sbjct: 8 KLVLLGASGVGKSSLVLRFVRDEFRDHHEITVGAA 42
>gi|400601582|gb|EJP69225.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|342877497|gb|EGU78949.1| hypothetical protein FOXB_10549 [Fusarium oxysporum Fo5176]
Length = 235
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|320038412|gb|EFW20348.1| GTP-binding protein YPT52 [Coccidioides posadasii str. Silveira]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|392871044|gb|EAS32901.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|340905351|gb|EGS17719.1| vacuolar protein sorting-associated protein 21-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|402077303|gb|EJT72652.1| vacuolar protein sorting-associated protein 21 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 46
>gi|336271401|ref|XP_003350459.1| hypothetical protein SMAC_02172 [Sordaria macrospora k-hell]
gi|380090981|emb|CCC11514.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 236
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|303317038|ref|XP_003068521.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240108202|gb|EER26376.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|168014172|ref|XP_001759627.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162689166|gb|EDQ75539.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp.
patens]
gi|167832326|dbj|BAG09233.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 208
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQTQ---AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
M +++S++ G R + + QT+ +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCTSSSHAAVHGSRNLQTHSQTEVLDSKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPS 60
Query: 58 QESTIGG 64
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|451845469|gb|EMD58781.1| hypothetical protein COCSADRAFT_128298 [Cochliobolus sativus
ND90Pr]
Length = 243
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC-----GNVPGR 71
KLVLLGE+AVGKSSLV+RFV F E +E TIG N+P R
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPSR 60
>gi|71004772|ref|XP_757052.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
gi|46096856|gb|EAK82089.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
Length = 280
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV+ F E +E TIG
Sbjct: 31 QTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGA 66
>gi|346971191|gb|EGY14643.1| vacuolar protein sorting-associated protein [Verticillium dahliae
VdLs.17]
Length = 247
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|212527720|ref|XP_002144017.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces marneffei ATCC
18224]
gi|210073415|gb|EEA27502.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces marneffei ATCC
18224]
Length = 262
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|242784469|ref|XP_002480393.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|242784474|ref|XP_002480394.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720540|gb|EED19959.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720541|gb|EED19960.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
Length = 261
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|346319675|gb|EGX89276.1| Rab5-like protein ypt51 [Cordyceps militaris CM01]
Length = 233
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|358379349|gb|EHK17029.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 229
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 45
>gi|401412488|ref|XP_003885691.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325120111|emb|CBZ55665.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 244
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P A+ YK VLLG+++VGKSSLV+RFV+ F + E+TIG
Sbjct: 31 PAASEPARPPSYKTVLLGDASVGKSSLVVRFVKNTFSDTMETTIGAA 77
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 26 TDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|449551362|gb|EMD42326.1| GTP-binding protein RAB5 [Ceriporiopsis subvermispora B]
Length = 208
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLGE + ++L LRFV+ QF +Y+ESTIG
Sbjct: 6 QFKLVLLGEMQIQYTTLFLRFVKDQFDDYRESTIGA 41
>gi|336469296|gb|EGO57458.1| hypothetical protein NEUTE1DRAFT_146066 [Neurospora tetrasperma
FGSC 2508]
gi|350291070|gb|EGZ72284.1| Rab5-like protein ypt51 [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|322699601|gb|EFY91361.1| Rab5-like protein ypt51 [Metarhizium acridum CQMa 102]
Length = 246
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|85076611|ref|XP_955952.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
gi|28916987|gb|EAA26716.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
Length = 236
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|402221866|gb|EJU01934.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 260
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+V+RFV+ F E +E TIG
Sbjct: 11 KPVQVKLVLLGEAAVGKSSVVMRFVQNDFSENKEPTIGA 49
>gi|401624887|gb|EJS42926.1| ypt52p [Saccharomyces arboricola H-6]
Length = 236
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|451998021|gb|EMD90486.1| hypothetical protein COCHEDRAFT_1139945 [Cochliobolus
heterostrophus C5]
Length = 243
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC-----GNVPGR 71
KLVLLGE+AVGKSSLV+RFV F E +E TIG N+P R
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPSR 60
>gi|13177617|gb|AAK14835.1| GTP-binding protein RAB5b [Mus musculus]
Length = 49
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 23/24 (95%)
Query: 41 GKSSLVLRFVRGQFHEYQESTIGG 64
GKSSLVLRFV+GQFHEYQESTIG
Sbjct: 1 GKSSLVLRFVKGQFHEYQESTIGA 24
>gi|410077949|ref|XP_003956556.1| hypothetical protein KAFR_0C04310 [Kazachstania africana CBS
2517]
gi|372463140|emb|CCF57421.1| hypothetical protein KAFR_0C04310 [Kazachstania africana CBS
2517]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+C KLVLLGES+VGKSS+V RFV G+F + +TIG
Sbjct: 6 VKVCNLKLVLLGESSVGKSSIVTRFVTGKFQK-NNATIGAA 45
>gi|365759643|gb|EHN01421.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 234
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|356550543|ref|XP_003543645.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 112
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q KLVLLG+ GK+S+ LRFV+G F QE TIG
Sbjct: 7 KIIQAKLVLLGDMGTGKTSIALRFVKGHFFPNQEPTIGAA 46
>gi|401841965|gb|EJT44266.1| YPT52-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|358398111|gb|EHK47469.1| hypothetical protein TRIATDRAFT_298602 [Trichoderma atroviride
IMI 206040]
Length = 229
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 45
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + TIG
Sbjct: 27 VDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGA 68
>gi|115396284|ref|XP_001213781.1| vacuolar protein sorting-associated protein 21 [Aspergillus
terreus NIH2624]
gi|114193350|gb|EAU35050.1| vacuolar protein sorting-associated protein 21 [Aspergillus
terreus NIH2624]
Length = 263
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|356556138|ref|XP_003546384.1| PREDICTED: ras-related protein RABF2b-like [Glycine max]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KI Q KLVLLG+ GK+S+ LRFV+G F QE TIG
Sbjct: 7 KIIQAKLVLLGDMGTGKTSIALRFVKGHFFPNQEPTIGAA 46
>gi|67537490|ref|XP_662519.1| hypothetical protein AN4915.2 [Aspergillus nidulans FGSC A4]
gi|40741803|gb|EAA60993.1| hypothetical protein AN4915.2 [Aspergillus nidulans FGSC A4]
gi|259482217|tpe|CBF76488.1| TPA: RAB GTPase Vps21/Ypt51, putative (AFU_orthologue;
AFUA_3G10740) [Aspergillus nidulans FGSC A4]
Length = 258
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|367026926|ref|XP_003662747.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila
ATCC 42464]
gi|347010016|gb|AEO57502.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila
ATCC 42464]
Length = 233
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 47
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 27 SDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 68
>gi|46122247|ref|XP_385677.1| hypothetical protein FG05501.1 [Gibberella zeae PH-1]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|194320033|pdb|3CLV|A Chain A, Crystal Structure Of Rab5a From Plasmodium Falciparum,
Pfb0500c
Length = 208
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLGES+VGKSS+VLR + FHE +TIG
Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGA 42
>gi|449702250|gb|EMD42925.1| small GTPase Rab5, putative [Entamoeba histolytica KU27]
Length = 102
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+K+VLLG+S+VGKSS+VLR + ++ E+QE+TIG
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGA 43
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T K+ KLVLLGESAVGKSS+VLRFV Q+ E +E TIG
Sbjct: 15 TPGKMKNVKLVLLGESAVGKSSIVLRFVDRQYVENREPTIGA 56
>gi|401396354|ref|XP_003879801.1| putative GTP-binding protein [Neospora caninum Liverpool]
gi|325114209|emb|CBZ49766.1| putative GTP-binding protein [Neospora caninum Liverpool]
Length = 229
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ K+VLLG+S VGKSSL LRF RG+F +Y E TIG
Sbjct: 36 EAKIVLLGDSGVGKSSLALRFCRGRFPQYHEVTIGA 71
>gi|322709279|gb|EFZ00855.1| Rab5-like protein ypt51 [Metarhizium anisopliae ARSEF 23]
Length = 351
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC-----GNVPGR 71
KLVLLGE+AVGKSSLVLRFV F E +E TIG N+P R
Sbjct: 133 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSR 178
>gi|169770627|ref|XP_001819783.1| vacuolar protein sorting-associated protein 21 [Aspergillus
oryzae RIB40]
gi|238486934|ref|XP_002374705.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus flavus NRRL3357]
gi|83767642|dbj|BAE57781.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699584|gb|EED55923.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus flavus NRRL3357]
gi|391867399|gb|EIT76645.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|380488839|emb|CCF37107.1| Ras family protein [Colletotrichum higginsianum]
Length = 236
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|310789342|gb|EFQ24875.1| Ras family protein [Glomerella graminicola M1.001]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|255942281|ref|XP_002561909.1| Pc18g00620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586642|emb|CAP94286.1| Pc18g00620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 261
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|408397097|gb|EKJ76247.1| hypothetical protein FPSE_03502 [Fusarium pseudograminearum
CS3096]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|378728260|gb|EHY54719.1| rab family, other [Exophiala dermatitidis NIH/UT8656]
Length = 252
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|217075522|gb|ACJ86121.1| unknown [Medicago truncatula]
Length = 181
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GR N AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 16 GRPSPENGGGDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + TIG
Sbjct: 29 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGA 68
>gi|6322866|ref|NP_012939.1| Ypt52p [Saccharomyces cerevisiae S288c]
gi|549796|sp|P36018.1|YPT52_YEAST RecName: Full=GTP-binding protein YPT52
gi|483599|emb|CAA53770.1| ypt52p [Saccharomyces cerevisiae]
gi|486429|emb|CAA82086.1| YPT52 [Saccharomyces cerevisiae]
gi|151941558|gb|EDN59921.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409836|gb|EDV13101.1| GTP-binding protein YPT52 [Saccharomyces cerevisiae RM11-1a]
gi|207343416|gb|EDZ70879.1| YKR014Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272630|gb|EEU07608.1| Ypt52p [Saccharomyces cerevisiae JAY291]
gi|259147845|emb|CAY81095.1| Ypt52p [Saccharomyces cerevisiae EC1118]
gi|285813272|tpg|DAA09169.1| TPA: Ypt52p [Saccharomyces cerevisiae S288c]
gi|323304136|gb|EGA57914.1| Ypt52p [Saccharomyces cerevisiae FostersB]
gi|323308216|gb|EGA61465.1| Ypt52p [Saccharomyces cerevisiae FostersO]
gi|323332610|gb|EGA74016.1| Ypt52p [Saccharomyces cerevisiae AWRI796]
gi|323336757|gb|EGA78021.1| Ypt52p [Saccharomyces cerevisiae Vin13]
gi|323347623|gb|EGA81888.1| Ypt52p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579576|dbj|GAA24738.1| K7_Ypt52p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764667|gb|EHN06189.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392298155|gb|EIW09253.1| Ypt52p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q+KLVLLG+S+VGKSS+V RFV+ F E +ESTIG
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGA 38
>gi|449304761|gb|EMD00768.1| hypothetical protein BAUCODRAFT_182526 [Baudoinia compniacensis
UAMH 10762]
Length = 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV +F +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNEFQPNKEPTIGA 50
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
C YKLV++GES VGKS+L+LRF R +F ++ TIG
Sbjct: 7 CMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIG 42
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
C YKLV++GES VGKS+L+LRF R +F ++ TIG
Sbjct: 7 CMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIG 42
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
C YKLV++GES VGKS+L+LRF R +F ++ TIG
Sbjct: 7 CMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIG 42
>gi|168068031|ref|XP_001785900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662426|gb|EDQ49283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 1 MANSNNSNSNGRG-GRIQRPN--DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
M S++S + +G GR+Q + D +K + KLVLLG+S VGKS ++LRFVRGQF
Sbjct: 1 MGCSSSSPAAVKGSGRLQTTSQPDVLDSKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPS 60
Query: 58 QESTIGG 64
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
C YKLV++GES VGKS+L+LRF R +F ++ TIG
Sbjct: 7 CMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIG 42
>gi|393218694|gb|EJD04182.1| GTP-binding protein ypt5 [Fomitiporia mediterranea MF3/22]
Length = 252
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGA 49
>gi|302903042|ref|XP_003048772.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
gi|256729706|gb|EEU43059.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
Length = 236
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GR N AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 16 GRPSPENGGGDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|167832330|dbj|BAG09235.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 1 MANSNNSNSNGRG-GRIQRPN--DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
M S++S + +G GR+Q + D +K + KLVLLG+S VGKS ++LRFVRGQF
Sbjct: 1 MGCSSSSPAAVKGSGRLQTTSQPDVLDSKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPS 60
Query: 58 QESTIGG 64
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|119187423|ref|XP_001244318.1| hypothetical protein CIMG_03759 [Coccidioides immitis RS]
Length = 391
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 141 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 174
>gi|302698433|ref|XP_003038895.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune
H4-8]
gi|300112592|gb|EFJ03993.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune
H4-8]
Length = 256
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSVVLRFVSDEFQPNKEPTIGA 49
>gi|258564008|ref|XP_002582749.1| vacuolar protein sorting-associated protein 21 [Uncinocarpus
reesii 1704]
gi|237908256|gb|EEP82657.1| vacuolar protein sorting-associated protein 21 [Uncinocarpus
reesii 1704]
Length = 264
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNDDFQENKEPTIGA 50
>gi|425768728|gb|EKV07245.1| hypothetical protein PDIP_74870 [Penicillium digitatum Pd1]
gi|425770218|gb|EKV08691.1| hypothetical protein PDIG_65550 [Penicillium digitatum PHI26]
Length = 261
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|323352564|gb|EGA85063.1| Ypt53p [Saccharomyces cerevisiae VL3]
Length = 220
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGE AVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVLLGEXAVGKSSIVLRFVSDDFKESKEPTIGAA 48
>gi|340516399|gb|EGR46648.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 229
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 45
>gi|327307688|ref|XP_003238535.1| Ras family protein [Trichophyton rubrum CBS 118892]
gi|326458791|gb|EGD84244.1| Ras family protein [Trichophyton rubrum CBS 118892]
Length = 274
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|293332195|ref|NP_001169100.1| uncharacterized protein LOC100382944 [Zea mays]
gi|223974943|gb|ACN31659.1| unknown [Zea mays]
gi|358365497|dbj|GAA82119.1| RAB GTPase Vps21/Ypt51 [Aspergillus kawachii IFO 4308]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|145232756|ref|XP_001399777.1| vacuolar protein sorting-associated protein 21 [Aspergillus niger
CBS 513.88]
gi|134056697|emb|CAL00639.1| unnamed protein product [Aspergillus niger]
gi|350634623|gb|EHA22985.1| hypothetical protein ASPNIDRAFT_197381 [Aspergillus niger ATCC
1015]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|70999656|ref|XP_754545.1| RAB GTPase Vps21/Ypt51 [Aspergillus fumigatus Af293]
gi|66852182|gb|EAL92507.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus fumigatus Af293]
gi|159127558|gb|EDP52673.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus fumigatus A1163]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|189188490|ref|XP_001930584.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330926522|ref|XP_003301495.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
gi|187972190|gb|EDU39689.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311323627|gb|EFQ90397.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGA 48
>gi|407924376|gb|EKG17428.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 276
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLV+RFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGA 50
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
gi|388498868|gb|AFK37500.1| unknown [Lotus japonicus]
Length = 200
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 27 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|156051994|ref|XP_001591958.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154705182|gb|EDO04921.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 241
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|225448984|ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
gi|147864853|emb|CAN79376.1| hypothetical protein VITISV_009584 [Vitis vinifera]
gi|296085986|emb|CBI31427.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 27 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|154276338|ref|XP_001539014.1| GTP-binding protein YPT52 [Ajellomyces capsulatus NAm1]
gi|150414087|gb|EDN09452.1| GTP-binding protein YPT52 [Ajellomyces capsulatus NAm1]
Length = 285
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|261333469|emb|CBH16464.1| GTP binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 230
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K VLLGESAVGKSS+ LRF R +F QE+TIG
Sbjct: 17 KTVLLGESAVGKSSIALRFARNEFSSNQETTIGAA 51
>gi|342184845|emb|CCC94327.1| ras-related protein rab-5 [Trypanosoma congolense IL3000]
Length = 227
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K VLLGESAVGKSS+ LRF R +F QE+TIG
Sbjct: 15 KTVLLGESAVGKSSIALRFARNEFSPNQETTIGAA 49
>gi|297816780|ref|XP_002876273.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322111|gb|EFH52532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 29 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68
>gi|121705630|ref|XP_001271078.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus clavatus NRRL 1]
gi|119399224|gb|EAW09652.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus clavatus NRRL 1]
Length = 262
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
Length = 202
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 29 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68
>gi|70929635|ref|XP_736848.1| rab5 protein [Plasmodium chabaudi chabaudi]
gi|56511736|emb|CAH86786.1| rab5 protein, putative [Plasmodium chabaudi chabaudi]
Length = 107
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K YK VLLGES+VGKSS+VLR + FH+ +TIG
Sbjct: 3 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTIGA 41
>gi|223994599|ref|XP_002286983.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220978298|gb|EED96624.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+VLLGES VGKSSL LRFV +F Y E+TIG
Sbjct: 15 KVVLLGESGVGKSSLALRFVTEKFRPYSEATIGA 48
>gi|431910428|gb|ELK13501.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 114
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Query: 15 RIQRPNDQTQA-KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG--------- 64
R RPN Q QA K ++ VLLGE AVGKSSLV F++G F + QES I G
Sbjct: 5 RTTRPNGQRQARKTGPFEWVLLGEPAVGKSSLVFGFIQGHFRD-QESAIRGAFLTQSVWV 63
Query: 65 ----CGNV 68
CGNV
Sbjct: 64 TVTTCGNV 71
>gi|119491781|ref|XP_001263385.1| RAB GTPase Vps21/Ypt51, putative [Neosartorya fischeri NRRL 181]
gi|119411545|gb|EAW21488.1| RAB GTPase Vps21/Ypt51, putative [Neosartorya fischeri NRRL 181]
Length = 262
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|170085289|ref|XP_001873868.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651420|gb|EDR15660.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 277
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 30 KSVQVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIGA 68
>gi|225555837|gb|EEH04127.1| vacuolar sorting-associated protein [Ajellomyces capsulatus
G186AR]
gi|240278672|gb|EER42178.1| vacuolar sorting protein [Ajellomyces capsulatus H143]
gi|325090408|gb|EGC43718.1| vacuolar sorting-associated protein [Ajellomyces capsulatus H88]
Length = 285
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+V LGESAVGKSS+VLRFV F E +E TIG
Sbjct: 14 KVVFLGESAVGKSSIVLRFVSDDFTESREPTIGAA 48
>gi|429850247|gb|ELA25539.1| rab GTPase vps21 [Colletotrichum gloeosporioides Nara gc5]
Length = 241
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 48
>gi|340057867|emb|CCC52218.1| ras-related protein rab-5 [Trypanosoma vivax Y486]
Length = 227
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ K VLLGESAVGKSS+ LRF R +F QE+TIG
Sbjct: 12 VITAKTVLLGESAVGKSSIALRFARNEFSLNQETTIGAA 50
>gi|237842853|ref|XP_002370724.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211968388|gb|EEB03584.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 243
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ YK VLLG+++VGKSSLV+RFV+ F + E+TIG
Sbjct: 36 ARPPSYKTVLLGDASVGKSSLVVRFVKNTFSDTMETTIGAA 76
>gi|295660766|ref|XP_002790939.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281191|gb|EEH36757.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 293
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 49
>gi|145332843|ref|NP_001078287.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
gi|222423401|dbj|BAH19672.1| AT3G54840 [Arabidopsis thaliana]
gi|332645778|gb|AEE79299.1| Ras-related small GTP-binding family protein [Arabidopsis
thaliana]
Length = 193
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 29 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68
>gi|68071525|ref|XP_677676.1| rab5 protein [Plasmodium berghei strain ANKA]
gi|56497885|emb|CAI04334.1| rab5 protein, putative [Plasmodium berghei]
Length = 226
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLGES+VGKSS+VLR + FH+ +TIG
Sbjct: 7 YKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTIGA 41
>gi|296825752|ref|XP_002850864.1| vacuolar protein sorting-associated protein 21 [Arthroderma otae
CBS 113480]
gi|238838418|gb|EEQ28080.1| vacuolar protein sorting-associated protein 21 [Arthroderma otae
CBS 113480]
Length = 274
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|82540551|ref|XP_724585.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479276|gb|EAA16150.1| Ras family [Plasmodium yoelii yoelii]
Length = 228
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLGES+VGKSS+VLR + FH+ +TIG
Sbjct: 7 YKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTIGA 41
>gi|169844272|ref|XP_001828857.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
gi|116509969|gb|EAU92864.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 10 KSVQVKLVLLGEAAVGKSSVVLRFVNNEFQPNKEPTIGA 48
>gi|392571611|gb|EIW64783.1| GTP-binding protein ypt5 [Trametes versicolor FP-101664 SS1]
Length = 254
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGA 49
>gi|407407389|gb|EKF31210.1| ras-related protein rab-5, putative [Trypanosoma cruzi
marinkellei]
Length = 226
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+VLLGESAVGKSS+ LRF R +F QE+T+G
Sbjct: 17 KIVLLGESAVGKSSIALRFARNEFCPNQETTVGA 50
>gi|395736003|ref|XP_003776682.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Pongo abelii]
Length = 227
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
IC +K VLLG AVGKSS VL V+GQFH Y ESTI
Sbjct: 51 ICLFKRVLLG-XAVGKSSXVLCLVKGQFHAYXESTI 85
>gi|429963305|gb|ELA42849.1| small GTP-binding protein domain protein [Vittaforma corneae ATCC
50505]
Length = 189
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K YK+V+LG +VGKSS+VL FV+G+F+ +ESTIG
Sbjct: 2 KTFTYKMVVLGHYSVGKSSIVLNFVKGEFNPREESTIGA 40
>gi|407846705|gb|EKG02711.1| small G-protein, putative [Trypanosoma cruzi]
Length = 226
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+VLLGESAVGKSS+ LRF R +F QE+T+G
Sbjct: 17 KIVLLGESAVGKSSIALRFARNEFCPNQETTVGA 50
>gi|403414221|emb|CCM00921.1| predicted protein [Fibroporia radiculosa]
Length = 275
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGA 49
>gi|71665955|ref|XP_819942.1| ras-related protein rab-5 [Trypanosoma cruzi strain CL Brener]
gi|58198651|gb|AAW65974.1| Rab GTPase protein 5 [Trypanosoma cruzi]
gi|70885265|gb|EAN98091.1| ras-related protein rab-5, putative [Trypanosoma cruzi]
Length = 226
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+VLLGESAVGKSS+ LRF R +F QE+T+G
Sbjct: 17 KIVLLGESAVGKSSIALRFARNEFCPNQETTVGA 50
>gi|124801156|ref|XP_001349618.1| Rab5a, GTPase [Plasmodium falciparum 3D7]
gi|3845201|gb|AAC71889.1| Rab5a, GTPase [Plasmodium falciparum 3D7]
Length = 235
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K YK VLLGES+VGKSS+VLR + FHE +TIG
Sbjct: 3 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGA 41
>gi|315055115|ref|XP_003176932.1| vacuolar protein sorting-associated protein 21 [Arthroderma
gypseum CBS 118893]
gi|311338778|gb|EFQ97980.1| vacuolar protein sorting-associated protein 21 [Arthroderma
gypseum CBS 118893]
Length = 274
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|326473840|gb|EGD97849.1| vacuolar protein sorting-associated protein 21 [Trichophyton
tonsurans CBS 112818]
gi|326478354|gb|EGE02364.1| vacuolar protein sorting-associated protein 21 [Trichophyton
equinum CBS 127.97]
Length = 274
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F E +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGA 50
>gi|395334217|gb|EJF66593.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGA 49
>gi|413957020|gb|AFW89669.1| hypothetical protein ZEAMMB73_922946 [Zea mays]
Length = 157
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MANSNNSNSNGRGGRIQRPNDQT---QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEY 57
M S++ + GG ND + +K + KLVLLG+S VGKS +VLRFVRGQF
Sbjct: 1 MGCSSSVPARNTGGLNTISNDSSPDASSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
Query: 58 QESTIGG 64
+ T+G
Sbjct: 61 SKVTVGA 67
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 2 PGIKEDMKTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 47
>gi|71414729|ref|XP_809457.1| ras-related protein rab-5 [Trypanosoma cruzi strain CL Brener]
gi|70873840|gb|EAN87606.1| ras-related protein rab-5, putative, partial [Trypanosoma cruzi]
Length = 188
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
K+VLLGESAVGKSS+ LRF R +F QE+T+G
Sbjct: 17 KIVLLGESAVGKSSIALRFARNEFCPNQETTVGAA 51
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 28 SKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|294939398|ref|XP_002782450.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239894056|gb|EER14245.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 210
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGN-----VPGRDR 73
YKLVLLG+++VGK+SLV RFV F + ++TIG + VPG +R
Sbjct: 13 YKLVLLGDASVGKTSLVQRFVHNSFEDTVQTTIGAAFSTQDLLVPGSNR 61
>gi|294895256|ref|XP_002775113.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239881042|gb|EER06929.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 176
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGN-----VPGRDR 73
YKLVLLG+++VGK+SLV RFV F + ++TIG + VPG +R
Sbjct: 13 YKLVLLGDASVGKTSLVQRFVHNSFEDTVQTTIGAAFSTQDLLVPGSNR 61
>gi|326497657|dbj|BAK05918.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T + + Q KLVLLG+ GK+S+V+RF +G ++E QESTIG
Sbjct: 5 TPSSVIQAKLVLLGDLGAGKTSIVVRFAKGLYYECQESTIGA 46
>gi|390604100|gb|EIN13491.1| ras-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K Q KLVLLGE+AVGKSS+VLRFV F +E TIG
Sbjct: 11 KSVQVKLVLLGEAAVGKSSVVLRFVSNDFQANKEPTIGA 49
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 32 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 27/38 (71%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ KLVLLGE AVGKSS+VLRFV F E +E TIG
Sbjct: 5 VTSIKLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGA 42
>gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragment) [Arabidopsis thaliana]
Length = 224
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
AK + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 27 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 66
>gi|45190420|ref|NP_984674.1| AEL187Cp [Ashbya gossypii ATCC 10895]
gi|44983316|gb|AAS52498.1| AEL187Cp [Ashbya gossypii ATCC 10895]
gi|374107891|gb|AEY96798.1| FAEL187Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
CQ KLVLLGES+VGKSS+V RF G+F + Q +TIG
Sbjct: 7 CQVKLVLLGESSVGKSSIVTRFTTGEFRKNQ-ATIGAA 43
>gi|397642236|gb|EJK75110.1| hypothetical protein THAOC_03182 [Thalassiosira oceanica]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 25/34 (73%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+ +LGES VGKSSL LRFV +F Y ESTIG
Sbjct: 7 KICILGESGVGKSSLALRFVSDEFKAYTESTIGA 40
>gi|328351151|emb|CCA37551.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 178
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 27/41 (65%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+K K+VLLGESAVGKSSLV RF F +ESTIG
Sbjct: 21 SKEADLKIVLLGESAVGKSSLVTRFASNAFDADKESTIGAA 61
>gi|398411932|ref|XP_003857299.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici
IPO323]
gi|339477184|gb|EGP92275.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici
IPO323]
Length = 252
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F +E TIG
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVSNAFQPNKEPTIGA 47
>gi|396081874|gb|AFN83488.1| Rab5-like GTPase [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 2 PAFKENMKTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 47
>gi|147820504|emb|CAN72108.1| hypothetical protein VITISV_044046 [Vitis vinifera]
Length = 157
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 33 VLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
VL+G+ GK+SLVLRFV+GQF E+QE TIG
Sbjct: 49 VLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGA 80
>gi|342321384|gb|EGU13318.1| GTP-binding protein ypt5 [Rhodotorula glutinis ATCC 204091]
Length = 1433
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGESAVGKSS+VLRF + F +E TIG
Sbjct: 17 QVKLVLLGESAVGKSSVVLRFCQNDFQPNKEPTIGA 52
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 34 YKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIG 67
>gi|452847434|gb|EME49366.1| hypothetical protein DOTSEDRAFT_19823 [Dothistroma septosporum
NZE10]
Length = 242
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F +E TIG
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGA 50
>gi|384493359|gb|EIE83850.1| hypothetical protein RO3G_08555 [Rhizopus delemar RA 99-880]
Length = 238
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+ KLVLLGESAVGKSS+ LRFV Q+ E +E TIG
Sbjct: 21 GKMKHVKLVLLGESAVGKSSIALRFVNRQYIENREPTIGA 60
>gi|395842000|ref|XP_003793809.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like,
partial [Otolemur garnettii]
Length = 224
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 12 RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRG-QFHEYQESTI 62
+GG +Q KI Q+ L+ LG+SA+GKSSL F G +FH+YQ+STI
Sbjct: 27 QGGTLQPNRPAAGNKIYQFXLIPLGKSAMGKSSLTFCFTEGVKFHKYQKSTI 78
>gi|1195467|gb|AAC46991.1| ras-related protein RAB-5 [Trypanosoma brucei rhodesiense]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ VLLGESAVGKSS+ LRF R +F QE+TIG
Sbjct: 17 RTVLLGESAVGKSSIALRFARNEFSSNQETTIGAA 51
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium
distachyon]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>gi|254567311|ref|XP_002490766.1| GTP-binding protein YPT10 [Komagataella pastoris GS115]
gi|12381854|emb|CAC24719.1| Ypt-like protein [Komagataella pastoris]
gi|238030562|emb|CAY68486.1| GTP-binding protein YPT10 [Komagataella pastoris GS115]
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 27/41 (65%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+K K+VLLGESAVGKSSLV RF F +ESTIG
Sbjct: 21 SKEADLKIVLLGESAVGKSSLVTRFASNAFDADKESTIGAA 61
>gi|392597256|gb|EIW86578.1| GTP-binding protein ypt5 [Coniophora puteana RWD-64-598 SS2]
Length = 259
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
Q KLVLLGE+AVGKSS+VLRFV +F +E TIG
Sbjct: 14 QVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIGA 49
>gi|375152082|gb|AFA36499.1| small GTP-binding protein, partial [Lolium perenne]
Length = 188
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 22 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGAS 56
>gi|71748886|ref|XP_827782.1| Ras-related protein Rab-5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833166|gb|EAN78670.1| ras-related protein rab-5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 230
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K VLLGESAVGKSS+ LRF R +F QE+TIG
Sbjct: 17 KTVLLGESAVGKSSIALRFARNEFSSNQETTIGA 50
>gi|116781044|gb|ABK21941.1| unknown [Picea sitchensis]
gi|224286274|gb|ACN40846.1| unknown [Picea sitchensis]
Length = 202
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ +K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 25 MSDSKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGA 67
>gi|452988129|gb|EME87884.1| hypothetical protein MYCFIDRAFT_70380 [Pseudocercospora fijiensis
CIRAD86]
Length = 245
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F +E TIG
Sbjct: 18 KLVLLGEAAVGKSSLVLRFVNDDFQPNKEPTIGA 51
>gi|401827320|ref|XP_003887752.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998759|gb|AFM98771.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P + K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 2 PGLKENMKTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 47
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ KL LLG++ VGKSSLVLRFV F+E ESTIG
Sbjct: 8 EVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGA 43
>gi|302780591|ref|XP_002972070.1| rab family GTPase [Selaginella moellendorffii]
gi|300160369|gb|EFJ26987.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 22 NGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGA 66
>gi|302781680|ref|XP_002972614.1| rab family GTPase [Selaginella moellendorffii]
gi|300160081|gb|EFJ26700.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
N K + KLVLLG+S VGKS +VLRFVRGQF + T+G
Sbjct: 22 NGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGA 66
>gi|156093789|ref|XP_001612933.1| small GTPase rab5 [Plasmodium vivax Sal-1]
gi|148801807|gb|EDL43206.1| small GTPase rab5, putative [Plasmodium vivax]
Length = 245
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K YK VLLGES+VGKSS+VLR + FH+ +TIG
Sbjct: 3 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTIGA 41
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D+ Q++ +K+VLLG+S+VGKS+L+ RF R +F+ +STIG
Sbjct: 6 DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIG 48
>gi|427793833|gb|JAA62368.1| Putative rab subfamily protein of small gtpase, partial
[Rhipicephalus pulchellus]
Length = 343
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 1 MANSNNSNSNGRGGR-------IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQ 53
M ++ NGR R +QR N + + K+++LGES VGK+SL++R+ +
Sbjct: 102 MLSAQPGTLNGRAKRQRRPSCVLQRANMSAKLQTADLKVIILGESHVGKTSLLVRYFEKR 161
Query: 54 FHEYQESTIGGCGNVPGRDRQ 74
F E+ ++T+G + R +
Sbjct: 162 FEEFPKATLGATFTLKTRGKH 182
>gi|324519364|gb|ADY47360.1| Ras-related protein M-Ras [Ascaris suum]
Length = 212
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
++RP D +K+ YKLV++GE VGKSSL ++F + QF +Y + TI
Sbjct: 4 VKRPPDD-DSKLPTYKLVVIGEGGVGKSSLTIQFFQKQFVDYYDPTI 49
>gi|83769133|dbj|BAE59270.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 227
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFV---------RGQFHEYQESTIGGC 65
Q+KLVLLGESAVGK SL L + R QF +Y+ESTIG
Sbjct: 15 FAQFKLVLLGESAVGKVSLSLLVILTVADVFHYRDQFDDYRESTIGAA 62
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLGE VGK+SLVLR+V +FHE STI
Sbjct: 13 HFKIVLLGEGCVGKTSLVLRYVEDKFHEKHFSTI 46
>gi|302507208|ref|XP_003015565.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
gi|291179133|gb|EFE34920.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
Length = 231
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 15/61 (24%)
Query: 19 PNDQTQAKICQYKLVLLGESA---------------VGKSSLVLRFVRGQFHEYQESTIG 63
P +T A+ Q+KLVLLG+ + + SSLVLRFV+ QF +Y+ESTIG
Sbjct: 6 PGGRTSARFAQFKLVLLGKVSRFNIADVRFKNEGFMLTTSSLVLRFVKDQFDDYRESTIG 65
Query: 64 G 64
Sbjct: 66 A 66
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q + KL+++GES VGKSS++LRF +FHE +ST+G
Sbjct: 5 QDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVG 44
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 10 YKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIG 43
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q + KL+++GES VGKSS++LRF +FHE +ST+G
Sbjct: 5 QDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVG 44
>gi|396468450|ref|XP_003838176.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
gi|312214743|emb|CBX94697.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRG---QFHEYQESTIGG 64
+A +C GESAVGKSSLVLRFV+ QF +Y+ESTIG
Sbjct: 152 KASLCLPANECTGESAVGKSSLVLRFVKACADQFDDYRESTIGA 195
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 10 YKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIG 43
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 10 YKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIG 43
>gi|19173399|ref|NP_597202.1| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
gi|449328868|gb|AGE95144.1| ras-related protein rab5 [Encephalitozoon cuniculi]
Length = 197
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 9 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 47
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 9 YKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIG 42
>gi|392512809|emb|CAD26378.2| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
Length = 190
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K +K+V+LG +VGKSSLVL++V+G+F+ +ESTIG
Sbjct: 2 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGA 40
>gi|384244624|gb|EIE18123.1| Rab5a Gtpase domain At 1.05 A resolution, partial [Coccomyxa
subellipsoidea C-169]
Length = 181
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
KLVLLG+S VGKS LVLR+VRGQF + T+G
Sbjct: 3 KLVLLGDSGVGKSCLVLRYVRGQFDANSKVTVGAA 37
>gi|260808582|ref|XP_002599086.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
gi|229284362|gb|EEN55098.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
Length = 219
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ Q++L+L+G+S VGKSSL+ RF G+F EY + T+G
Sbjct: 7 LYQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVG 43
>gi|260808596|ref|XP_002599093.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
gi|229284369|gb|EEN55105.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
Length = 219
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ Q++L+L+G+S VGKSSL+ RF G+F EY + T+G
Sbjct: 7 LYQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVG 43
>gi|406603144|emb|CCH45297.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 211
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
ND TQ + KLVLLG KSS+V RFV+ F EY+ESTIG
Sbjct: 5 NDITQQRTAHAKLVLLG-----KSSIVQRFVKNSFDEYRESTIGAA 45
>gi|299470741|emb|CBN79787.1| Rab22, RAB family GTPase [Ectocarpus siliculosus]
Length = 136
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ K+VLLG++ VGKSSLV RFV F Y ESTIG
Sbjct: 13 EVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGAS 49
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D+ Q++ +K+VLLG+S+VGKS+L+ RF R +F+ +STIG
Sbjct: 6 DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIG 48
>gi|453088930|gb|EMF16970.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 316
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
KLVLLGE+AVGKSSLVLRFV F +E TIG
Sbjct: 91 KLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGA 124
>gi|429329569|gb|AFZ81328.1| Ras family Rab small GTP-binding protein [Babesia equi]
Length = 223
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK VLLG+++VGKSS V+R RG+F + STIGG
Sbjct: 6 YKTVLLGDASVGKSSFVVRLTRGEFSDNINSTIGGA 41
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 11 YKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIG 44
>gi|118368628|ref|XP_001017520.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89299287|gb|EAR97275.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777786|dbj|BAJ21289.1| Rab-family small GTPase RabX9 [Tetrahymena thermophila]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNV 68
+Q+P + + +I K+VLLG+ VGKSS+ LR+ + QF E E TIGG N+
Sbjct: 24 VQKPLNTKKKEI---KVVLLGDPNVGKSSIALRYCKHQFSETYELTIGGVYNL 73
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 11 YKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIG 44
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 11 YKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIG 44
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T + YKLV+LG +VGKSSLV+++V+ +F+ +ESTIG
Sbjct: 4 TSDMVYNYKLVVLGYYSVGKSSLVMKYVKREFNPNEESTIGA 45
>gi|448097878|ref|XP_004198785.1| Piso0_002175 [Millerozyma farinosa CBS 7064]
gi|359380207|emb|CCE82448.1| Piso0_002175 [Millerozyma farinosa CBS 7064]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 30/35 (85%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK+V+LG+++VGK+SLV RF++ +F+E+ +TIG
Sbjct: 9 YKVVILGDTSVGKTSLVHRFLKNEFNEHTANTIGA 43
>gi|448101745|ref|XP_004199635.1| Piso0_002175 [Millerozyma farinosa CBS 7064]
gi|359381057|emb|CCE81516.1| Piso0_002175 [Millerozyma farinosa CBS 7064]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+I YK+V+LG+++VGK+SLV RF++ +F+E+ +TIG
Sbjct: 5 RIPGYKVVILGDTSVGKTSLVHRFLKNEFNEHTANTIGAA 44
>gi|308477314|ref|XP_003100871.1| CRE-RAB-18 protein [Caenorhabditis remanei]
gi|308264445|gb|EFP08398.1| CRE-RAB-18 protein [Caenorhabditis remanei]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+D T + + K++++GES VGKSSL+LRFV F Q +TIG
Sbjct: 2 SDDTSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG 45
>gi|167832328|dbj|BAG09234.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
D Q +I KLVLLG+S VGKS ++LRFVRGQF + T+G
Sbjct: 26 DSKQIRI---KLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGA 66
>gi|123449668|ref|XP_001313551.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121895438|gb|EAY00622.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ K+VLLG + VGK++LV RF+ G+F + +ST+G C
Sbjct: 9 EAKIVLLGATMVGKTTLVTRFITGEFDQSIKSTVGAC 45
>gi|221053101|ref|XP_002257925.1| rab5 [Plasmodium knowlesi strain H]
gi|193807757|emb|CAQ38462.1| rab5, putative [Plasmodium knowlesi strain H]
Length = 238
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K YK VLLGES+VGKSS+VLR + FH+ +TIG
Sbjct: 3 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTIGA 41
>gi|403356514|gb|EJY77853.1| Small GTPase Rab5c, putative [Oxytricha trifallax]
Length = 205
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 30/35 (85%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+K+VLLG+++VGK+S++ RF +GQF + Q++TIG
Sbjct: 5 FKVVLLGDTSVGKTSILQRFAKGQFKKDQDATIGA 39
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q + KL+++GES VGKSS++LRF +FHE +ST+G
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVG 42
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q + KL+++GES VGKSS++LRF +FHE +ST+G
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVG 42
>gi|294654383|ref|XP_456433.2| DEHA2A02178p [Debaryomyces hansenii CBS767]
gi|199428839|emb|CAG84385.2| DEHA2A02178p [Debaryomyces hansenii CBS767]
Length = 213
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK+V+LG+S+VGK+SLV RF +F E+ +TIG
Sbjct: 9 YKIVILGDSSVGKTSLVHRFTTNKFDEHTANTIGAA 44
>gi|289742367|gb|ADD19931.1| GTPase Rab18 [Glossina morsitans morsitans]
Length = 195
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
KL+++GES VGKSSL+ RFV +F EY + TIG
Sbjct: 8 KLLVIGESGVGKSSLIRRFVEDKFDEYHDVTIG 40
>gi|156088801|ref|XP_001611807.1| small GTP-binding protein [Babesia bovis T2Bo]
gi|154799061|gb|EDO08239.1| small GTP-binding protein, putative [Babesia bovis]
Length = 241
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLG+++VGKSS VLR RG+F + STIG
Sbjct: 7 YKTVLLGDASVGKSSFVLRLTRGEFADSTTSTIGA 41
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+GES VGKS+L+LRF R +F + STIG
Sbjct: 13 YKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIG 46
>gi|357117431|ref|XP_003560472.1| PREDICTED: ras-related protein Rab5-like [Brachypodium
distachyon]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ Q KLVLLG+ GK+S+V+RF +G +++ QESTIG
Sbjct: 6 VIQAKLVLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAA 44
>gi|12311692|emb|CAC24481.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 83
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 41 GKSSLVLRFVRGQFHEYQESTIGGC 65
GKSSLVLRFV+GQF E+QESTIG
Sbjct: 3 GKSSLVLRFVKGQFLEFQESTIGAA 27
>gi|390338998|ref|XP_783565.2| PREDICTED: GTP-binding protein Rit1-like [Strongylocentrotus
purpuratus]
Length = 231
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
P T+A + YK+VLLG+ VGKS+L L+FV F EY + TI
Sbjct: 18 PASTTKATMKVYKIVLLGQGGVGKSALTLQFVTHSFLEYHDPTI 61
>gi|12311688|emb|CAC24479.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
gi|12311690|emb|CAC24480.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 83
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 41 GKSSLVLRFVRGQFHEYQESTIGGC 65
GKSSLVLRFV+GQF E+QESTIG
Sbjct: 3 GKSSLVLRFVKGQFLEFQESTIGAA 27
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
P+ + K ++K+VLLGE VGKSSLVLRFV +F STI
Sbjct: 2 PDATAEQKQFKFKVVLLGEGCVGKSSLVLRFVENKFSSRHLSTI 45
>gi|12311686|emb|CAC24478.1| GTP bindinf protein [Cichorium intybus x Cichorium endivia]
Length = 83
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 41 GKSSLVLRFVRGQFHEYQESTIGGC 65
GKSSLVLRFV+GQF E+QESTIG
Sbjct: 3 GKSSLVLRFVKGQFLEFQESTIGAA 27
>gi|294949590|ref|XP_002786273.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
gi|239900430|gb|EER18069.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
Length = 217
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ K+VLLG+S VGKSS+ LRF +G+F + E TIG
Sbjct: 34 ESKIVLLGDSGVGKSSMALRFCQGRFPPFHEVTIGAA 70
>gi|116182662|ref|XP_001221180.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186256|gb|EAQ93724.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVR 51
+ Q+KLVLLGESAVGKSS+VLRFV+
Sbjct: 15 RFAQFKLVLLGESAVGKSSIVLRFVK 40
>gi|323456390|gb|EGB12257.1| hypothetical protein AURANDRAFT_70056 [Aureococcus
anophagefferens]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++K+VLLG+ VGK+ LVLRF+ G ++ Q+STIG
Sbjct: 10 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGA 45
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N++ + + +K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 5 NEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|255080986|ref|XP_002504059.1| predicted protein [Micromonas sp. RCC299]
gi|226519326|gb|ACO65317.1| predicted protein [Micromonas sp. RCC299]
Length = 222
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLG++ VGKS++V+RFV+G+F E + T+G
Sbjct: 52 TRVKLVLLGDTGVGKSAIVVRFVQGEFSEESKVTVGAA 89
>gi|255720074|ref|XP_002556317.1| KLTH0H10274p [Lachancea thermotolerans]
gi|238942283|emb|CAR30455.1| KLTH0H10274p [Lachancea thermotolerans CBS 6340]
Length = 201
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGES+VGKS+LV RF G FH+ +TIG
Sbjct: 8 AELKLVLLGESSVGKSALVTRFTTGAFHK-NNATIGAA 44
>gi|89258431|gb|ABD65439.1| Rab21 [Suberites domuncula]
Length = 222
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+ RP T + K+VLLGE AVGK+S+VLR+V +F++ EST+
Sbjct: 4 VHRPRPST----VKAKVVLLGEGAVGKTSIVLRYVENKFNDKHESTL 46
>gi|219122405|ref|XP_002181536.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406812|gb|EEC46750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 236
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 17 QRPNDQTQ-AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+RP T A + +YKLV LG+ +VGK+S++ RF+ F + ++TIG
Sbjct: 20 KRPTSSTSLAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIG 67
>gi|146419893|ref|XP_001485906.1| hypothetical protein PGUG_01577 [Meyerozyma guilliermondii ATCC
6260]
gi|146389321|gb|EDK37479.1| hypothetical protein PGUG_01577 [Meyerozyma guilliermondii ATCC
6260]
Length = 202
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK+VLLG+S+VGK+SLV RF G F+E +TIG
Sbjct: 7 YKIVLLGDSSVGKTSLVHRFTNGSFNENTANTIGA 41
>gi|269861848|ref|XP_002650604.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
gi|220065897|gb|EED43454.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
Length = 191
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAA 47
>gi|341881170|gb|EGT37105.1| hypothetical protein CAEBREN_13223 [Caenorhabditis brenneri]
Length = 210
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
P + K ++K+VLLGE VGKSSLVLRFV +F STI
Sbjct: 2 PEVAAEQKDFKFKIVLLGEGCVGKSSLVLRFVENKFSSRHLSTI 45
>gi|323455357|gb|EGB11225.1| hypothetical protein AURANDRAFT_59866 [Aureococcus
anophagefferens]
Length = 198
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P T+ + C K+VLLG++ VGKSSL R+V F Y ESTIG
Sbjct: 2 PAQPTRTREC--KVVLLGDTGVGKSSLAQRYVTNTFKPYSESTIGA 45
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+V++G+S VGKS+L+LRF R +F ++STIG
Sbjct: 10 YKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIG 43
>gi|123482404|ref|XP_001323774.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62869547|gb|AAX97494.1| small Rab GTPase RabX19 [Trichomonas vaginalis]
gi|121906645|gb|EAY11551.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNV 68
KLVLLGES VGK+S+V RG+F E Q STIG C +
Sbjct: 12 KLVLLGESTVGKTSIVNVAHRGEFIEDQTSTIGACFQI 49
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N++ + + +K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 5 NEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQE 59
++ Q+KLVLLGESAVGKSSLVLRFV+ + +E
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKPGYDSNRE 48
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N++ + + +K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 5 NEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|299117133|emb|CBN75097.1| Rab50, RAB family GTPase [Ectocarpus siliculosus]
Length = 226
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++K+V+LG+ VGK+ LVLRF+ G F Q+STIG
Sbjct: 12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGA 47
>gi|269865265|ref|XP_002651863.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
gi|220063736|gb|EED42192.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
Length = 125
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAA 47
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+V++G+S VGKS+L+LRF R +F ++STIG
Sbjct: 10 YKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIG 43
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ RPN + +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 1 MSRPN----KSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|269866354|ref|XP_002652244.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
gi|220062888|gb|EED41812.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
Length = 196
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAA 47
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D+ Q++ +K+VLLG+S+VGKS+L+ RF R +F +STIG
Sbjct: 6 DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIG 48
>gi|385303904|gb|EIF47949.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 257
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++I KLV LGES+VGKSS++ RF F+E + STIG
Sbjct: 22 SRIADLKLVFLGESSVGKSSIIQRFQNNTFNEGKASTIGA 61
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 30/34 (88%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L++RFV+ +FH+ ++TIG
Sbjct: 14 FKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIG 47
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIG 48
>gi|50310231|ref|XP_455135.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644271|emb|CAG97842.1| KLLA0F01232p [Kluyveromyces lactis]
Length = 210
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
I KLVLLGES+VGKS++V RF G+FH TIG
Sbjct: 7 ISTVKLVLLGESSVGKSTIVTRFTTGEFH-INSPTIGAA 44
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D+ Q++ +K+VLLG+S+VGKS+L+ RF R +F +STIG
Sbjct: 6 DEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIG 48
>gi|269866120|ref|XP_002652162.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
gi|220063041|gb|EED41895.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi
H348]
Length = 165
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLV+LG +VGKSS+VL F++ +F+ +ESTIG
Sbjct: 12 FKLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAA 47
>gi|403367803|gb|EJY83725.1| hypothetical protein OXYTRI_18541 [Oxytricha trifallax]
Length = 210
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MANSNNSNSNGRGGRIQRPN--DQTQAKICQY-KLVLLGESAVGKSSLVLRFVRGQFHEY 57
M N N S R N DQ Q K Y K+VL+G S VGK+S+ RF+ G+F Y
Sbjct: 1 MGNCNKSPKKSRKSVKDDLNMKDQNQDKKQDYAKIVLIGNSGVGKTSIAQRFIEGKFDMY 60
Query: 58 QESTIGGC 65
++TIG
Sbjct: 61 NKNTIGAS 68
>gi|291234199|ref|XP_002737035.1| PREDICTED: RAB21, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 216
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
AK +K+VLLGE AVGK+S+VLR+V +F+E ST+
Sbjct: 9 AKSFNFKVVLLGEGAVGKTSVVLRYVENKFNEKHISTL 46
>gi|428182225|gb|EKX51086.1| hypothetical protein GUITHDRAFT_85102 [Guillardia theta CCMP2712]
Length = 215
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
YK+VLLGE VGK+SLVLR+V F + Q++TI
Sbjct: 10 YKIVLLGEGRVGKTSLVLRYVNNTFSDKQQTTI 42
>gi|170576424|ref|XP_001893624.1| Ras-related protein M-Ras [Brugia malayi]
gi|158600269|gb|EDP37548.1| Ras-related protein M-Ras, putative [Brugia malayi]
Length = 212
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP D +K+ YKLV++GE VGKSSL ++F + F +Y + TI
Sbjct: 5 KRPPDD-DSKLPTYKLVVIGEGGVGKSSLTIQFFQKHFVDYYDPTI 49
>gi|325180386|emb|CCA14789.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 369
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
K+VL+G+S VGKS+LVLRF FH + E T+G
Sbjct: 105 KVVLIGDSQVGKSNLVLRFTNSTFHAHSEQTVG 137
>gi|312085587|ref|XP_003144738.1| Ras-2 protein [Loa loa]
Length = 212
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP D +K+ YKLV++GE VGKSSL ++F + F +Y + TI
Sbjct: 5 KRPPDD-DSKLPTYKLVVIGEGGVGKSSLTIQFFQKHFVDYYDPTI 49
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS
6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS
6284]
Length = 207
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F E+ ++TIG
Sbjct: 6 LTKYKIVFLGEQGVGKTSLITRFMYDTFDEHYQATIG 42
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
++ +A+ +K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 5 SEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|268575806|ref|XP_002642883.1| C. briggsae CBR-RAB-18 protein [Caenorhabditis briggsae]
gi|74765201|sp|P90726.1|RAB18_CAEBR RecName: Full=Ras-related protein Rab-18
gi|1710360|gb|AAB38279.1| membrane associated GTP binding protein RAB18 [Caenorhabditis
briggsae]
Length = 202
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+D + + + K++++GES VGKSSL+LRFV F Q +TIG
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG 45
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|25151658|ref|NP_741092.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
gi|75017365|sp|Q8MXS1.1|RAB18_CAEEL RecName: Full=Ras-related protein Rab-18
gi|351018339|emb|CCD62283.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+D + + + K++++GES VGKSSL+LRFV F Q +TIG
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG 45
>gi|390371106|dbj|GAB64987.1| small GTPase rab5 [Plasmodium cynomolgi strain B]
Length = 237
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 26 KICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
K YK VLLGES+VGKSS+VLR + FH+ +TI
Sbjct: 3 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHDNTNTTI 39
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N+ + + +K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 5 NEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|341891892|gb|EGT47827.1| hypothetical protein CAEBREN_03430 [Caenorhabditis brenneri]
Length = 202
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+D + + + K++++GES VGKSSL+LRFV F Q +TIG
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG 45
>gi|403358572|gb|EJY78942.1| Ras family GTPase putative [Oxytricha trifallax]
Length = 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KI K+V+LGE+ VGK+SL RF G F+E+Q ST+
Sbjct: 2 EKKISPAKIVVLGEARVGKTSLTYRFSSGTFNEHQPSTVDAT 43
>gi|123455115|ref|XP_001315305.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121897977|gb|EAY03082.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
++K+VL+G S+ GK+S+V+RF RG F QESTIG
Sbjct: 6 KFKVVLMGASSAGKTSIVVRFSRGTFGGDQESTIGAA 42
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|402588552|gb|EJW82485.1| R-ras3 protein [Wuchereria bancrofti]
Length = 211
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP D +K+ YKLV++GE VGKSSL ++F + F +Y + TI
Sbjct: 5 KRPPDD-DSKLPTYKLVVIGEGGVGKSSLTIQFFQKHFVDYYDPTI 49
>gi|327275917|ref|XP_003222718.1| PREDICTED: ras-related protein Rab-18-B-like [Anolis
carolinensis]
Length = 212
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
KL+L+G+S VGKSSL+LRF QF Y++ TIG
Sbjct: 18 KLLLIGDSGVGKSSLLLRFTEDQFEPYRKPTIG 50
>gi|82794111|ref|XP_728308.1| Rab5c GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23484593|gb|EAA19873.1| Rab5c GTPase-related [Plasmodium yoelii yoelii]
Length = 182
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 36 GESAVGKSSLVLRFVRGQFHEYQESTIGG 64
G+++VGKS +V+RF + +F+EYQESTIG
Sbjct: 12 GDTSVGKSCIVVRFAKNEFYEYQESTIGA 40
>gi|403360525|gb|EJY79941.1| hypothetical protein OXYTRI_22779 [Oxytricha trifallax]
Length = 195
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 19 PNDQ-------TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
P DQ +Q KI + K+VLLG+S VGKSS+ R+ + F E + TIGG
Sbjct: 9 PADQDIFGASGSQQKIIEAKVVLLGDSGVGKSSIAQRYCKNLFSESHDVTIGGA 62
>gi|403357746|gb|EJY78504.1| hypothetical protein OXYTRI_24338 [Oxytricha trifallax]
Length = 227
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG-----CGNVPG 70
K+V+LGE+ VGK+SL +RF GQF E Q+ST+ N+PG
Sbjct: 9 KIVVLGEARVGKTSLTVRFCMGQFDEKQQSTLDASCLENTVNLPG 53
>gi|401419274|ref|XP_003874127.1| putative ras-related protein rab-5 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490361|emb|CBZ25621.1| putative ras-related protein rab-5 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 236
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+V+LGES GKSS+ LRF R +F QE+TIG
Sbjct: 15 KIVMLGESGTGKSSIALRFTRNEFLANQETTIGA 48
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D Q++ +K+VLLG+S+VGKS+L+ RF R +F+ +STIG
Sbjct: 6 DDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIG 48
>gi|366990847|ref|XP_003675191.1| hypothetical protein NCAS_0B07360 [Naumovozyma castellii CBS
4309]
gi|342301055|emb|CCC68820.1| hypothetical protein NCAS_0B07360 [Naumovozyma castellii CBS
4309]
Length = 225
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 19 PNDQTQAKI--CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
P D ++ C+ KLVLLGES+VGK+S+V RF G+F +TIG
Sbjct: 10 PRDANDKEVYRCRLKLVLLGESSVGKTSIVTRFTTGKFQR-NNATIGA 56
>gi|428671198|gb|EKX72116.1| Ras family Rab small STP-binding protein [Babesia equi]
Length = 257
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 13 GGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
G +R ++ + K+ YKLV+LG++ VGKS +V RFV+ +F + Q+STIG
Sbjct: 52 GRERKREGEKGKDKVFHYKLVILGDAFVGKSCIVSRFVKDEFVD-QQSTIG 101
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|154411817|ref|XP_001578943.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121913144|gb|EAY17957.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 15 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
R + +D ++ +C K+V++G S VGK+SL LR++ G+F++ E TIG
Sbjct: 2 RTRMADDASEPTLC-CKIVMIGNSGVGKTSLSLRWINGEFNKTMEPTIGA 50
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+T + +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 5 RTNKTLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 46
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|290998075|ref|XP_002681606.1| rab family small GTPase [Naegleria gruberi]
gi|284095231|gb|EFC48862.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLGE VGK+SL LRF++ F + Q+STI
Sbjct: 7 FKIVLLGEGRVGKTSLTLRFIKDVFDDNQQSTI 39
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|291225826|ref|XP_002732900.1| PREDICTED: RAB39B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 221
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q++L+L+G+S VGKSSL+ RF G+F E+ + T+G
Sbjct: 16 QFRLILIGDSTVGKSSLLRRFCDGKFVEFSDPTVG 50
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF R +FH +STIG
Sbjct: 177 FKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIG 210
>gi|383852551|ref|XP_003701790.1| PREDICTED: ras-related protein Rab-18-like [Megachile rotundata]
Length = 219
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
KL+++GES VGKSS++LRF +F+E +ST+G
Sbjct: 8 KLLMIGESNVGKSSIILRFTEDEFYENMQSTVG 40
>gi|157867931|ref|XP_001682519.1| putative ras-related protein rab-5 [Leishmania major strain
Friedlin]
gi|68125973|emb|CAJ03989.1| putative ras-related protein rab-5 [Leishmania major strain
Friedlin]
Length = 236
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+V+LGES GKSS+ LRF R +F QE+TIG
Sbjct: 15 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGA 48
>gi|393909538|gb|EFO19333.2| Ras-2 protein [Loa loa]
Length = 228
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP D +K+ YKLV++GE VGKSSL ++F + F +Y + TI
Sbjct: 5 KRPPDD-DSKLPTYKLVVIGEGGVGKSSLTIQFFQKHFVDYYDPTI 49
>gi|115752504|ref|XP_001178826.1| PREDICTED: ras-related protein Rab-33B-like [Strongylocentrotus
purpuratus]
Length = 236
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 9 SNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+NGRG PND+ + +K++++G+S VGK+ L RF G+F E E+TIG
Sbjct: 8 ANGRGA--TDPNDKNRRI---FKIIVIGDSNVGKTCLTYRFCGGEFPEKTEATIG 57
>gi|223997454|ref|XP_002288400.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220975508|gb|EED93836.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 202
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
T A + +YKLV LG+ +VGK+S++ RF+ F + ++TIG
Sbjct: 23 TLAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIG 63
>gi|91087515|ref|XP_969125.1| PREDICTED: similar to AGAP005159-PA [Tribolium castaneum]
gi|270009456|gb|EFA05904.1| hypothetical protein TcasGA2_TC008717 [Tribolium castaneum]
Length = 253
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 7 SNSNGRGGRIQ-RP-------NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQ 58
SN +G+G ++ RP D+T + YK+V+LG+ VGKS++ L+FV F +Y
Sbjct: 18 SNRSGKGSEVEDRPTAGASNTQDKTSGGLRVYKIVVLGDGGVGKSAVTLQFVNHSFLDYH 77
Query: 59 ESTI 62
+ TI
Sbjct: 78 DPTI 81
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIG 48
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 29/35 (82%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
QYK+V++G+S VGK++++ +F RG+F E ++T+G
Sbjct: 10 QYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVG 44
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
T A + +YKLV LG+ AVGK+S++ RF+ +F ++TIG
Sbjct: 8 TAAALSKYKLVFLGDQAVGKTSIITRFMYDKFDNNYQATIG 48
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YK+VLLG+ +VGK+S++ RF+ G F E +TIG
Sbjct: 8 FLRYKVVLLGDQSVGKTSIITRFINGTFEESYHATIG 44
>gi|71657908|ref|XP_817462.1| small Rab GTP binding protein [Trypanosoma cruzi strain CL
Brener]
gi|70882655|gb|EAN95611.1| small Rab GTP binding protein, putative [Trypanosoma cruzi]
Length = 200
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+YK+VLLG+S VGKSSLV R + +++E Q ST+G
Sbjct: 10 KYKVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGA 45
>gi|403216033|emb|CCK70531.1| hypothetical protein KNAG_0E02720 [Kazachstania naganishii CBS
8797]
Length = 231
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 14 LSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 50
>gi|444512842|gb|ELV10184.1| Ras-related protein Rab-43 [Tupaia chinensis]
Length = 212
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVPGRDRQG 75
P D Q +KLVL+G+++VGK+ +V RF G F E Q STIG + D QG
Sbjct: 8 PGDADQQYDFLFKLVLVGDASVGKTCVVQRFKTGAFAERQGSTIGVDFTMKTLDVQG 64
>gi|365990439|ref|XP_003672049.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS
421]
gi|343770823|emb|CCD26806.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS
421]
Length = 222
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|366992854|ref|XP_003676192.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS
4309]
gi|342302058|emb|CCC69831.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS
4309]
Length = 222
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F+ +STIG
Sbjct: 15 FKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIG 48
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 29/35 (82%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
QYK+V++G+S VGK++++ +F RG+F E ++T+G
Sbjct: 10 QYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVG 44
>gi|407855996|gb|EKG06725.1| ras-related protein rab-5, putative [Trypanosoma cruzi]
Length = 200
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+YK+VLLG+S VGKSSLV R + +++E Q ST+G
Sbjct: 10 KYKVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGA 45
>gi|154335613|ref|XP_001564045.1| putative ras-related protein rab-5 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061076|emb|CAM38097.1| putative ras-related protein rab-5 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 236
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+V+LGES GKSS+ LRF R +F QE+TIG
Sbjct: 15 KIVMLGESGAGKSSIALRFARNEFLANQETTIGA 48
>gi|299470548|emb|CBN78536.1| Rab28, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 242
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 14 GRIQR-PNDQTQAKI----CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
GRIQ + ++A++ QYK++LLG+ VGK+S+ RF +G F + + TIG
Sbjct: 8 GRIQEDAKEDSEAEVEPERLQYKVILLGDGTVGKTSIATRFAQGDFSQMYKQTIG 62
>gi|300708060|ref|XP_002996218.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
gi|239605499|gb|EEQ82547.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
Length = 196
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK+V+LG +VGKSSLVL++ + +F+ +ESTIG
Sbjct: 12 YKMVVLGYYSVGKSSLVLKYAKNEFNPNEESTIGA 46
>gi|326912237|ref|XP_003202460.1| PREDICTED: ras-related protein Rab-19-like [Meleagris gallopavo]
Length = 214
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVPGRDRQG 75
+K++L+G+S VGK+ +V RF GQF+E Q++TIG V D G
Sbjct: 16 FKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDG 61
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS
4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS
4417]
Length = 215
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|298712751|emb|CBJ33348.1| Rab18, RAB family GTPase [Ectocarpus siliculosus]
Length = 210
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KL+L+G++AVGKSS++LRF F ++ +STIG
Sbjct: 13 FKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIG 46
>gi|50728924|ref|XP_416347.1| PREDICTED: ras-related protein Rab-19 [Gallus gallus]
Length = 214
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVPGRDRQG 75
+K++L+G+S VGK+ +V RF GQF+E Q++TIG V D G
Sbjct: 16 FKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDG 61
>gi|342185577|emb|CCC95061.1| putative small GTP-binding protein Rab5b [Trypanosoma congolense
IL3000]
Length = 207
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
A + +YK+VLLG+S VGKSSLV R + ++ E Q ST+G
Sbjct: 8 APMKKYKIVLLGDSGVGKSSLVQRLAKNEWCENQNSTVGA 47
>gi|300121600|emb|CBK22118.2| unnamed protein product [Blastocystis hominis]
Length = 182
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKSSL+LRF G F E STIG
Sbjct: 17 MFKIVLVGDSGVGKSSLLLRFADGAFTESFISTIG 51
>gi|325192953|emb|CCA27337.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 308
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 30/36 (83%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
I ++K+VLLGE VGK+S++LR+++G++ + Q ST+
Sbjct: 9 IRKFKIVLLGEGRVGKTSILLRYIKGEYTDQQVSTL 44
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+V++G+S VGKS L+ RFVR +FH ++TIG
Sbjct: 17 FKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIG 50
>gi|146084122|ref|XP_001464928.1| putative ras-related protein rab-5 [Leishmania infantum JPCM5]
gi|398013871|ref|XP_003860127.1| ras-related protein rab-5, putative [Leishmania donovani]
gi|134069023|emb|CAM67167.1| putative ras-related protein rab-5 [Leishmania infantum JPCM5]
gi|322498346|emb|CBZ33420.1| ras-related protein rab-5, putative [Leishmania donovani]
Length = 236
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
K+V+LGES GKSS+ LRF R +F QE+TIG
Sbjct: 15 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGA 48
>gi|403369295|gb|EJY84490.1| hypothetical protein OXYTRI_17664 [Oxytricha trifallax]
Length = 221
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+KLVLLG+ VGK+ + +R+ G+F E+TIGGC
Sbjct: 31 HKLVLLGDMGVGKTCISIRYAYGKFSSTHEATIGGC 66
>gi|260948922|ref|XP_002618758.1| hypothetical protein CLUG_02217 [Clavispora lusitaniae ATCC
42720]
gi|238848630|gb|EEQ38094.1| hypothetical protein CLUG_02217 [Clavispora lusitaniae ATCC
42720]
Length = 188
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK+VLLG+S+VGK+SLV RF+ F + +TIG
Sbjct: 5 YKIVLLGDSSVGKTSLVHRFISDAFDAHSANTIGA 39
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VLLG+S VGKS+LV RF + +F++ +STIG
Sbjct: 3 FKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIG 36
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLG+ VGK+SLVLR+V QF + Q +TI
Sbjct: 11 FKVVLLGDGEVGKTSLVLRYVNNQFSDSQSATI 43
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF R +FH +STIG
Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIG 44
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D Q++ +K+VL+G+S+VGKS+L+ RF R +F+ +STIG
Sbjct: 6 DDGQSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIG 48
>gi|196003396|ref|XP_002111565.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
gi|190585464|gb|EDV25532.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
Length = 163
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ KL LLG++ VGKSSLVLRFV F+ ESTIG
Sbjct: 5 EIKLCLLGDAGVGKSSLVLRFVCDTFNACSESTIGA 40
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 32 LVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
LVLLG+S VGKS ++LRFVRGQF + T+G
Sbjct: 5 LVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGA 37
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF R +FH +STIG
Sbjct: 13 FKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIG 46
>gi|407420015|gb|EKF38411.1| ras-related protein rab-5, putative [Trypanosoma cruzi
marinkellei]
Length = 200
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+YK+VLLG+S VGKSSLV R + +++E Q ST+G
Sbjct: 10 KYKVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGA 45
>gi|401624481|gb|EJS42537.1| ypt6p [Saccharomyces arboricola H-6]
Length = 216
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|145516685|ref|XP_001444231.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834389|emb|CAI44532.1| rab_B33 [Paramecium tetraurelia]
gi|124411642|emb|CAK76834.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+V++G SAVGKSSL++RF QF + STIG
Sbjct: 6 YKIVIVGNSAVGKSSLLIRFCDDQFRDMYLSTIG 39
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 10 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 46
>gi|154341312|ref|XP_001566609.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063932|emb|CAM40123.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 211
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 15 RIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
R P A ++KLVLLGES VGKSS+V R +R F ST+G
Sbjct: 6 RSSTPTTGPSASARKFKLVLLGESGVGKSSVVQRLMRNAFSARPHSTVGA 55
>gi|123478510|ref|XP_001322417.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905263|gb|EAY10194.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
T+ I K++++GES+VGK+S+V +F R Q+ E TIG C
Sbjct: 2 TEQGIPPAKVIMMGESSVGKTSIVYKFSRDQYDEAGTPTIGAC 44
>gi|260797885|ref|XP_002593931.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
gi|229279163|gb|EEN49942.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
Length = 164
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ KL LLG+S VGKSSLV+RFV F ESTIG
Sbjct: 5 EIKLCLLGDSGVGKSSLVVRFVTDTFTANLESTIGA 40
>gi|326668725|ref|XP_689291.4| PREDICTED: ras-related protein Rab-44 [Danio rerio]
Length = 363
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+ Q+ +V++G S VGK+S + RF GQF E STIG
Sbjct: 174 SKVVQFNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIG 212
>gi|300175260|emb|CBK20571.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
T++ + K+VLLG++A GKSSL++RF G F+ +STIG
Sbjct: 3 TESALTGLKVVLLGDAATGKSSLLIRFTTGVFNPQLDSTIGA 44
>gi|154415006|ref|XP_001580529.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121914747|gb|EAY19543.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVPGRDRQG 75
C ++ V++G+SAVGK+S+V RF+R F + + ST+G R G
Sbjct: 3 CTFRSVMIGDSAVGKTSIVNRFLRNSFDQSEPSTVGALYESHNETRNG 50
>gi|428180040|gb|EKX48909.1| hypothetical protein GUITHDRAFT_151724 [Guillardia theta
CCMP2712]
Length = 207
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N Q + +YKLV LG+ +VGK+S++ RF+ +F ++TIG
Sbjct: 3 NAQAAPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDSTYQATIG 46
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|258597414|ref|XP_001348128.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
gi|254832720|gb|AAN36041.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 45
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KL+L+G++ VGKSS++LRF F ++Q+STIG
Sbjct: 50 FKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIG 83
>gi|1628428|emb|CAA63555.1| GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 45
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+V++G+SAVGKS+L+ RF R +F E ++TIG
Sbjct: 10 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIG 43
>gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL
Brener]
gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 268
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ A + ++K+VLLG+ +VGK+SLV RF+ F + ++TIG
Sbjct: 28 STAAVVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIG 68
>gi|145526450|ref|XP_001449036.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834509|emb|CAI44567.1| rab_A33 [Paramecium tetraurelia]
gi|124416602|emb|CAK81639.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+V++G SAVGKSSL++RF QF + STIG
Sbjct: 6 YKIVIVGNSAVGKSSLLIRFCDDQFRDMYLSTIG 39
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|397611796|gb|EJK61478.1| hypothetical protein THAOC_18027, partial [Thalassiosira oceanica]
Length = 307
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
A + +YKLV LG+ +VGK+S++ RF+ F + ++TIG
Sbjct: 99 APLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIG 137
>gi|389583987|dbj|GAB66721.1| small GTPase Rab6 [Plasmodium cynomolgi strain B]
Length = 207
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 45
>gi|367017001|ref|XP_003682999.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
gi|359750662|emb|CCE93788.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
Length = 222
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 10 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 46
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+V++G+SAVGKS+L+ RF R +F E ++TIG
Sbjct: 11 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIG 44
>gi|365759371|gb|EHN01162.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|401842296|gb|EJT44532.1| YPT6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 216
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 44
>gi|239611052|gb|EEQ88039.1| ypt5 protein [Ajellomyces dermatitidis ER-3]
Length = 208
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 9/41 (21%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
A+ Q+KLVLLGESAVGK QF +Y+ESTIG
Sbjct: 13 ARFAQFKLVLLGESAVGKD---------QFDDYRESTIGAA 44
>gi|20467238|gb|AAM22471.1|AF502069_1 small GTP-binding protein [Babesia gibsoni]
Length = 230
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLG+++VGKSS +R RG+F + STIG
Sbjct: 7 YKTVLLGDASVGKSSFAVRLTRGEFSDNTNSTIGA 41
>gi|238879009|gb|EEQ42647.1| hypothetical protein CAWG_00866 [Candida albicans WO-1]
Length = 219
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK+VLLG+S+VGK+SLV RF +F + +TIG
Sbjct: 14 YKIVLLGDSSVGKTSLVHRFTTNRFDTHTPNTIGAA 49
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VLLG+S VGKS+LV RF + +F++ +STIG
Sbjct: 10 FKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIG 43
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 20 NDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGCGNVPGRDRQG 75
+++ A I K++++GES VGKSSL+LRFV F +TIG V R G
Sbjct: 2 SEEESAPITTLKILIIGESGVGKSSLMLRFVDDTFDPEISATIGVDFRVTSRTVDG 57
>gi|68480210|ref|XP_715915.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68480323|ref|XP_715865.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437508|gb|EAK96853.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437560|gb|EAK96904.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 219
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK+VLLG+S+VGK+SLV RF +F + +TIG
Sbjct: 14 YKIVLLGDSSVGKTSLVHRFTTNRFDTHTPNTIGAA 49
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+KLVLLG+ VGK+SLVLR+V F + QE+T+
Sbjct: 11 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATV 45
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLG+ VGK+SLVLR+V QF + Q +TI
Sbjct: 11 FKVVLLGDGRVGKTSLVLRYVNNQFSDSQSATI 43
>gi|390357473|ref|XP_782114.3| PREDICTED: ras-related protein Rab-39B-like [Strongylocentrotus
purpuratus]
Length = 240
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q++L+L+G+S VGKSSL+ RF G+F E + T+G
Sbjct: 33 QFRLILVGDSTVGKSSLLRRFCDGKFVEVSDPTVG 67
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KLVL+G+++VGK+ LV RF G F E Q STIG
Sbjct: 229 FKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIG 262
>gi|367013002|ref|XP_003681001.1| hypothetical protein TDEL_0D02060 [Torulaspora delbrueckii]
gi|359748661|emb|CCE91790.1| hypothetical protein TDEL_0D02060 [Torulaspora delbrueckii]
Length = 202
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
+ KLVLLGES+VGKSS+V+R+V G F + +TIG
Sbjct: 10 VSDLKLVLLGESSVGKSSIVMRYVTGSFQK-TNATIGAA 47
>gi|363750482|ref|XP_003645458.1| hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889092|gb|AET38641.1| Hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 221
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+T + +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 5 RTGKALSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 46
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 28 CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+KLVLLG+ VGK+SLVLR+V F + QE+T+
Sbjct: 13 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATV 47
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 45
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KL+++G++AVGKSS+++RF F E+ +STIG
Sbjct: 15 FKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIG 48
>gi|241948903|ref|XP_002417174.1| YPT-like, Rab5-family GTPAse, putative [Candida dubliniensis
CD36]
gi|223640512|emb|CAX44766.1| YPT-like, Rab5-family GTPAse, putative [Candida dubliniensis
CD36]
Length = 219
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK+VLLG+S+VGK+SLV RF +F + +TIG
Sbjct: 14 YKIVLLGDSSVGKTSLVHRFTTNRFDMHTPNTIGAA 49
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ R+ R +FH ++TIG
Sbjct: 11 FKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIG 44
>gi|145540750|ref|XP_001456064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833749|emb|CAI39344.1| rab_B20 [Paramecium tetraurelia]
gi|124423874|emb|CAK88667.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KLV++G S VGKSSL+LRF QF E +TIG
Sbjct: 9 FKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIG 42
>gi|340058625|emb|CCC52985.1| putative small GTP-binding protein Rab5b [Trypanosoma vivax Y486]
Length = 211
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+YK+VLLGES VGK+SLV R + ++ E Q ST+G
Sbjct: 11 KYKVVLLGESGVGKTSLVQRLAKNEWCENQNSTVGA 46
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
P + +YK+VLLG+ +VGK+SLV RF+ F + ++TIG
Sbjct: 19 PAASETTHMAKYKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIG 63
>gi|145549135|ref|XP_001460247.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834498|emb|CAI44563.1| rab_A40 [Paramecium tetraurelia]
gi|124428076|emb|CAK92850.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KLV++G S VGKSSL+LRF QF E +TIG
Sbjct: 9 FKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIG 42
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ P+DQ +K+VL+G++ VGKS+L+LR+ + QF +STIG
Sbjct: 4 ETPHDQENYDYL-FKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIG 49
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 NSNNSNSNGRGGRIQRPNDQTQAKICQY--KLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
N N NS +G R R N Y KL+L+G+S VGKS L+LRF + E S
Sbjct: 17 NPNFPNSPAKGYRSSRQNSPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYIS 76
Query: 61 TIG 63
TIG
Sbjct: 77 TIG 79
>gi|401411219|ref|XP_003885057.1| RAB5C, member RAS oncogene family, related, partial [Neospora
caninum Liverpool]
gi|325119476|emb|CBZ55029.1| RAB5C, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 185
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ T A + +YKLV LGE AVGK+S++ RF+ F ++TIG
Sbjct: 3 EATVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIG 45
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ R+ R +FH ++TIG
Sbjct: 11 FKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIG 44
>gi|146080635|ref|XP_001464048.1| putative small Rab GTP binding protein [Leishmania infantum
JPCM5]
gi|134068138|emb|CAM66423.1| putative small Rab GTP binding protein [Leishmania infantum
JPCM5]
Length = 211
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GR A ++KLVLLGES VGKSS+V R ++ F E ST+G
Sbjct: 5 GRAPTTTAGASASTRKFKLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGA 55
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+V++G+SAVGKS+L+ RF R +F E ++TIG
Sbjct: 10 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIG 43
>gi|398012080|ref|XP_003859234.1| small Rab GTP binding protein, putative [Leishmania donovani]
gi|38146267|gb|AAR11496.1| Rab5b [Leishmania donovani]
gi|322497448|emb|CBZ32522.1| small Rab GTP binding protein, putative [Leishmania donovani]
Length = 211
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 14 GRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
GR A ++KLVLLGES VGKSS+V R ++ F E ST+G
Sbjct: 5 GRAPTTTAGASASTRKFKLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGA 55
>gi|322803217|gb|EFZ23238.1| hypothetical protein SINV_08216 [Solenopsis invicta]
Length = 224
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
K++++GES VGKSS++LRF +F+E +ST+G
Sbjct: 13 KILMIGESNVGKSSILLRFTEDEFYENMQSTVG 45
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
+ K+ LLGES VGKSS+VLRFV F ESTIG
Sbjct: 5 EVKVCLLGESGVGKSSIVLRFVSDSFKGALESTIGA 40
>gi|37791225|gb|AAR03593.1| Rab5 [Leishmania donovani]
Length = 211
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++KLVLLGES VGKSS+V R ++ F E ST+G
Sbjct: 20 KFKLVLLGESGVGKSSVVQRLMKDAFSEKLNSTVGA 55
>gi|399217901|emb|CCF74788.1| unnamed protein product [Babesia microti strain RI]
Length = 236
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLGE++VGKSSL LR R +F + +TIG
Sbjct: 9 YKTVLLGEASVGKSSLALRLTRDEFLDNTNATIGA 43
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
P QT +K++++G+++VGKSS++LRF F E+ +STIG
Sbjct: 4 PPPQTFPYDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIG 48
>gi|405971528|gb|EKC36363.1| Ras-related protein Rab-33B [Crassostrea gigas]
Length = 242
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 7 SNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
SNS + + QTQ +I +K++++G+S VGK+ L RF G+F + E+TIG
Sbjct: 8 SNSPSKDPSVTVIEKQTQRRI--FKIIVIGDSNVGKTCLTYRFCTGKFPDKTEATIG 62
>gi|401417481|ref|XP_003873233.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489462|emb|CBZ24720.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++KLVLLGES VGKSS+V R ++ F E ST+G
Sbjct: 20 KFKLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGA 55
>gi|157866120|ref|XP_001681766.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
gi|68125065|emb|CAJ02473.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
Length = 212
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
++KLVLLGES VGKSS+V R ++ F E ST+G
Sbjct: 21 KFKLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGA 56
>gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 211
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
T + + +YKLV LG+ +VGK+S++ RF+ +F ++TIG
Sbjct: 5 TTSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIG 45
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 19 PNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
P ++ +KLVLLG+ VGK+SLVLR+V F E Q++T+
Sbjct: 38 PRMSSKPSATTFKLVLLGDGRVGKTSLVLRYVNNVFSEKQQATV 81
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+V++G+SAVGKS+L+ RF R +F E ++TIG
Sbjct: 11 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIG 44
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL+G+S VGKSSL+ RF R +F +STIG
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIG 46
>gi|401413382|ref|XP_003886138.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325120558|emb|CBZ56112.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 815
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
++KLV +G+S VGKS L++RFV+ Q+ + STIG
Sbjct: 536 KFKLVTVGDSGVGKSCLLMRFVQDQYSAFHVSTIG 570
>gi|145537818|ref|XP_001454620.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422386|emb|CAK87223.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KLV++G S VGKSSL+LRF QF E +TIG
Sbjct: 9 FKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIG 42
>gi|268532416|ref|XP_002631336.1| C. briggsae CBR-RAB-21 protein [Caenorhabditis briggsae]
Length = 206
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
++K+VLLGE VGKSSLVLRFV +F STI
Sbjct: 10 KFKVVLLGEGCVGKSSLVLRFVENKFSTRHLSTI 43
>gi|313241573|emb|CBY33817.1| unnamed protein product [Oikopleura dioica]
Length = 180
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 12 KYKLVFLGEQGVGKTSLITRFMYDSFDQHYQATIG 46
>gi|401411617|ref|XP_003885256.1| Rab1-prov protein, related [Neospora caninum Liverpool]
gi|325119675|emb|CBZ55228.1| Rab1-prov protein, related [Neospora caninum Liverpool]
Length = 212
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 16 IQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+Q P T + KL+L+G+S VGKSS++LRF F+E Q STIG
Sbjct: 1 MQVPAGATASYDHLLKLLLIGDSGVGKSSILLRFSEDVFNEKQLSTIG 48
>gi|307214891|gb|EFN89759.1| Ras-related protein Rab-18 [Harpegnathos saltator]
Length = 223
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 31 KLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
K++++GES VGKSS++LRF +F+E +ST+G
Sbjct: 11 KILMIGESNVGKSSILLRFTEDEFYENMQSTVG 43
>gi|156383598|ref|XP_001632920.1| predicted protein [Nematostella vectensis]
gi|156219983|gb|EDO40857.1| predicted protein [Nematostella vectensis]
Length = 166
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL G++AVGKSS +LR R +FH ST+G
Sbjct: 1 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLG 35
>gi|242078713|ref|XP_002444125.1| hypothetical protein SORBIDRAFT_07g008850 [Sorghum bicolor]
gi|241940475|gb|EES13620.1| hypothetical protein SORBIDRAFT_07g008850 [Sorghum bicolor]
Length = 349
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D Q++ +K+VLLG+S+VGKS+L+ RF R + + +STIG
Sbjct: 6 DDGQSQNYLFKIVLLGDSSVGKSNLLARFARNELYPNSKSTIG 48
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF R +FH +STIG
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIG 45
>gi|443716621|gb|ELU08055.1| hypothetical protein CAPTEDRAFT_163376 [Capitella teleta]
Length = 216
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLGE AVGK+SL+LRFV +F++ +T+
Sbjct: 9 FKVVLLGEGAVGKTSLLLRFVENKFNDKHLTTL 41
>gi|237829989|ref|XP_002364292.1| RAB6 protein [Toxoplasma gondii ME49]
gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gondii]
gi|211961956|gb|EEA97151.1| RAB6 protein [Toxoplasma gondii ME49]
gi|221507160|gb|EEE32764.1| RAB6 protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
T A + +YKLV LGE AVGK+S++ RF+ F ++TIG
Sbjct: 5 TVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIG 45
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 86 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 120
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
++K+VLLGE VGKSSLVLRFV +F STI
Sbjct: 12 KFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTI 45
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
++K+VLLGE VGKSSLVLRFV +F STI
Sbjct: 11 KFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTI 44
>gi|320580341|gb|EFW94564.1| GTPase [Ogataea parapolymorpha DL-1]
Length = 849
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 35 LGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
LGESAVGKSS+V RFV+ F + +ESTIG
Sbjct: 661 LGESAVGKSSIVHRFVKDSFTDSRESTIGA 690
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF + QF + Q++TIG
Sbjct: 14 FKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIG 47
>gi|198422662|ref|XP_002130534.1| PREDICTED: similar to Di-Ras2 [Ciona intestinalis]
Length = 239
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 ANSNNSNSNG-RGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQES 60
A ++ +++G R R++ DQ+ Y++VL G VGKSSLVLRF++G F E
Sbjct: 23 ATTDEQSADGARARRLRAMPDQSN----DYRVVLFGAGGVGKSSLVLRFIKGTFKETYVP 78
Query: 61 TI 62
TI
Sbjct: 79 TI 80
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
RP+D+ +K+VL+G+S VGKS+L+ RF R +F+ +STIG
Sbjct: 4 RPDDEYD---YLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 46
>gi|197127490|gb|ACH43988.1| putative Di-Ras2 variant 1 [Taeniopygia guttata]
Length = 198
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
Y++V+ G + VGKSSLVLRFVRG F E TI
Sbjct: 8 YRVVVFGAAGVGKSSLVLRFVRGTFRETYIPTI 40
>gi|2865392|gb|AAC32735.1| GTP binding protein [Plasmodium falciparum]
Length = 116
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 45
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 22 QTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
Q + + +K++++GES VGKSSL+LRF F + Q TIG
Sbjct: 2 QQENILATFKILIIGESGVGKSSLMLRFTEDDFDKDQALTIG 43
>gi|353242162|emb|CCA73828.1| hypothetical protein PIIN_07782 [Piriformospora indica DSM 11827]
Length = 110
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 24 QAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
I ++ V+LG VGKS+L LRF++G FHE + TI
Sbjct: 4 PPPIREFSAVILGAGGVGKSALTLRFMKGYFHEAYDPTI 42
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
I K++++GE+ VGKSSL+LRF QF Q +TIG
Sbjct: 5 IATLKILIIGEAGVGKSSLLLRFTDDQFDPEQSATIG 41
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+S VGKS+L+ RF R +FH +STIG
Sbjct: 13 FKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIG 46
>gi|390332105|ref|XP_003723419.1| PREDICTED: ras and EF-hand domain-containing protein homolog
isoform 1 [Strongylocentrotus purpuratus]
Length = 790
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
YK+VL G++AVGKSS ++R +G FH ST+G
Sbjct: 593 YKIVLAGDAAVGKSSFIMRLCKGIFHSNLNSTLG 626
>gi|213410657|ref|XP_002176098.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
gi|212004145|gb|EEB09805.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
Length = 201
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
++KLV LGE +VGK+SL+ RF+ QF ++TIG
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIG 45
>gi|242093978|ref|XP_002437479.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
gi|241915702|gb|EER88846.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
Length = 210
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Query: 27 ICQYKLVLLGESAVGKSSLVLRFVRGQFHE---------YQESTIGGC 65
I Q KLVLLG+ GK+S+V+RF +G ++E +QESTIG
Sbjct: 6 IIQAKLVLLGDLGAGKTSIVVRFAKGLYYECQARTTTSFHQESTIGAA 53
>gi|17554726|ref|NP_497972.1| Protein RAS-2 [Caenorhabditis elegans]
gi|1737463|gb|AAB38969.1| GTP binding protein [Caenorhabditis elegans]
gi|3876002|emb|CAA84796.1| Protein RAS-2 [Caenorhabditis elegans]
Length = 211
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP + +K+ YKLV++G+ VGKSSL ++F + QF +Y + TI
Sbjct: 6 KRPP-EDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>gi|241675854|ref|XP_002400245.1| RAS-related protein, putative [Ixodes scapularis]
gi|215504210|gb|EEC13704.1| RAS-related protein, putative [Ixodes scapularis]
Length = 149
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 16 IQRPNDQTQAKI-----CQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+ RP Q A + Q++L+L+G+S VGKS+L+ F G+FH+ + T+G
Sbjct: 23 VLRPTVQWSAMVEPIFDYQFRLILIGDSTVGKSTLLKSFTDGKFHDICDPTVG 75
>gi|149244756|ref|XP_001526921.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449315|gb|EDK43571.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 218
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK+V+LG+S+VGK+SLV RF +F E +TIG
Sbjct: 15 YKIVVLGDSSVGKTSLVHRFTTNKFEEQTLNTIGA 49
>gi|449268291|gb|EMC79161.1| GTP-binding protein Di-Ras2 [Columba livia]
Length = 198
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
Y++V+ G + VGKSSLVLRFVRG F E TI
Sbjct: 8 YRVVVFGAAGVGKSSLVLRFVRGTFRETYIPTI 40
>gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum]
Length = 240
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 29 QYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+YKLV LGE AVGK+S++ RF+ F +STIG
Sbjct: 44 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIG 78
>gi|308487626|ref|XP_003106008.1| CRE-RAS-2 protein [Caenorhabditis remanei]
gi|308254582|gb|EFO98534.1| CRE-RAS-2 protein [Caenorhabditis remanei]
Length = 211
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP + +K+ YKLV++G+ VGKSSL ++F + QF +Y + TI
Sbjct: 6 KRPP-EDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>gi|84997009|ref|XP_953226.1| small GTPase (Rab family member) [Theileria annulata strain
Ankara]
gi|65304222|emb|CAI76601.1| small GTPase (Rab family member), putative [Theileria annulata]
Length = 247
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGG 64
YK VLLG+++VGKSS +R +G+F + STIG
Sbjct: 5 YKTVLLGDASVGKSSFAVRLTKGEFSDNTNSTIGA 39
>gi|350537201|ref|NP_001232516.1| putative Di-Ras2 variant 2 [Taeniopygia guttata]
gi|197127491|gb|ACH43989.1| putative Di-Ras2 variant 2 [Taeniopygia guttata]
gi|197127492|gb|ACH43990.1| putative Di-Ras2 variant 1 [Taeniopygia guttata]
Length = 198
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
Y++V+ G + VGKSSLVLRFVRG F E TI
Sbjct: 8 YRVVVFGAAGVGKSSLVLRFVRGTFRETYIPTI 40
>gi|167384556|ref|XP_001737005.1| GTP-binding protein YPTM2 [Entamoeba dispar SAW760]
gi|165900423|gb|EDR26744.1| GTP-binding protein YPTM2, putative [Entamoeba dispar SAW760]
Length = 206
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 18 RPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
P+ Q QA + +K++++GESAVGK++++ R+ +FH+ STIG
Sbjct: 4 EPHLQQQADM-TFKILIIGESAVGKTAILERYCENEFHDELISTIG 48
>gi|298707324|emb|CBJ25951.1| Rab6, RAB family GTPase [Ectocarpus siliculosus]
Length = 217
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 25 AKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
A + +YKLV LG+ +VGK+S++ RF+ F + ++TIG
Sbjct: 17 APLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIG 55
>gi|429966400|gb|ELA48397.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 198
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIGGC 65
YK+V+LG +VGKSSL+ ++V+ +F+ +ESTIG
Sbjct: 13 YKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAA 48
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS L+ RF R QF+ ++TIG
Sbjct: 18 FKVVLIGDSAVGKSQLLARFARNQFNLDSKATIG 51
>gi|229594508|ref|XP_001031389.3| Ras family protein [Tetrahymena thermophila]
gi|225566813|gb|EAR83726.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777754|dbj|BAJ21273.1| Rab-family small GTPase Rab1C [Tetrahymena thermophila]
Length = 210
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+KLV++G S VGKSSL+LRF QF+E +TIG
Sbjct: 9 FKLVIIGNSGVGKSSLLLRFSDDQFNESYLTTIG 42
>gi|268574164|ref|XP_002642059.1| C. briggsae CBR-RAS-2 protein [Caenorhabditis briggsae]
Length = 211
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 17 QRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+RP + +K+ YKLV++G+ VGKSSL ++F + QF +Y + TI
Sbjct: 6 KRPP-EDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
+K+VL+G+SAVGKS+L+ RF R +F ++TIG
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARNEFDSNSKATIG 48
>gi|170583481|ref|XP_001896599.1| ras-related protein Rab-21 [Brugia malayi]
gi|158596123|gb|EDP34522.1| ras-related protein Rab-21, putative [Brugia malayi]
Length = 219
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
T + + +K+VLLGE AVGK+SL+LR+V +F ST+
Sbjct: 10 TSSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTL 49
>gi|384247403|gb|EIE20890.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 23 TQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
T + + +YKLV LG+ +VGK+S++ RF+ +F ++TIG
Sbjct: 6 TVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIG 46
>gi|410075027|ref|XP_003955096.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS
2517]
gi|372461678|emb|CCF55961.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS
2517]
Length = 235
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 10/58 (17%)
Query: 6 NSNSNGRGGRIQRPNDQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
N+N + +GG+ + +YK+V LGE VGK+SL+ RF+ F ++ ++TIG
Sbjct: 9 NANKSSKGGK----------SLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIG 56
>gi|324512193|gb|ADY45056.1| Ras-related protein Rab-21 [Ascaris suum]
Length = 239
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 30 YKLVLLGESAVGKSSLVLRFVRGQFHEYQESTI 62
+K+VLLGE AVGKSSL+LR+V +F+ STI
Sbjct: 37 FKVVLLGEGAVGKSSLMLRYVENKFNPRHISTI 69
>gi|312084876|ref|XP_003144454.1| rab family protein 18 [Loa loa]
gi|307760381|gb|EFO19615.1| Ras-like protein Rab-18 [Loa loa]
Length = 200
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 21 DQTQAKICQYKLVLLGESAVGKSSLVLRFVRGQFHEYQESTIG 63
D A I K++++GES VGKSSL+LRFV F +TIG
Sbjct: 2 DDVGAAITTLKILIVGESGVGKSSLMLRFVDDTFDPEIAATIG 44
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,220,022,255
Number of Sequences: 23463169
Number of extensions: 37313484
Number of successful extensions: 157524
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6869
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 150610
Number of HSP's gapped (non-prelim): 7071
length of query: 76
length of database: 8,064,228,071
effective HSP length: 47
effective length of query: 29
effective length of database: 6,961,459,128
effective search space: 201882314712
effective search space used: 201882314712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)