Query psy13552
Match_columns 173
No_of_seqs 79 out of 81
Neff 4.4
Searched_HMMs 13730
Date Fri Aug 16 22:12:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13552.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13552hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1va4a_ c.69.1.12 (A:) Arylest 46.9 22 0.0016 23.9 5.8 46 43-93 36-81 (271)
2 d1a8sa_ c.69.1.12 (A:) Chlorop 42.2 27 0.002 23.6 5.7 47 43-94 36-82 (273)
3 d1zs3a1 a.25.1.1 (A:3-173) Dod 36.8 0.44 3.2E-05 35.9 -5.2 55 51-105 33-87 (171)
4 d1a88a_ c.69.1.12 (A:) Chlorop 35.1 39 0.0028 22.8 5.6 47 43-94 38-84 (275)
5 d1thta_ c.69.1.13 (A:) Myristo 34.8 20 0.0015 26.8 4.4 46 41-90 47-92 (302)
6 d1tubb1 c.32.1.1 (B:1-245) Tub 34.4 3.8 0.00027 32.0 -0.1 24 64-94 103-126 (243)
7 d1brta_ c.69.1.12 (A:) Bromope 31.6 48 0.0035 22.3 5.6 44 44-92 41-84 (277)
8 d1xkla_ c.69.1.20 (A:) Salicyl 28.3 43 0.0031 21.7 4.7 49 42-95 18-67 (258)
9 d1a8qa_ c.69.1.12 (A:) Bromope 26.1 71 0.0052 21.4 5.7 45 44-93 37-81 (274)
10 d2btoa1 c.32.1.1 (A:3-246) Tub 25.1 7 0.00051 30.3 -0.0 58 64-128 105-191 (244)
11 d1tuba1 c.32.1.1 (A:1-245) Tub 24.8 9.6 0.0007 29.6 0.7 25 64-95 105-129 (245)
12 d1r7ma2 d.95.2.1 (A:121-225) D 21.7 17 0.0012 24.4 1.4 74 54-139 18-103 (105)
13 d1hkha_ c.69.1.12 (A:) Gamma-l 21.1 73 0.0053 21.4 4.9 35 51-90 48-82 (279)
No 1
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=46.93 E-value=22 Score=23.92 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=34.1
Q ss_pred HHHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHHh
Q psy13552 43 HQFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREEE 93 (173)
Q Consensus 43 ~~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~~ 93 (173)
+.+++..+-.+..|+.+|.+. ||+|.....+.+++++.+.+..=.+
T Consensus 36 ~~~~~~l~~~g~~vi~~D~~G-----~G~S~~~~~~~~~~~~~~~~~~~~~ 81 (271)
T d1va4a_ 36 EYQMEYLSSRGYRTIAFDRRG-----FGRSDQPWTGNDYDTFADDIAQLIE 81 (271)
T ss_dssp HHHHHHHHTTTCEEEEECCTT-----STTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEeccc-----cccccccccccccccccccceeeee
Confidence 445565566688999999887 5678887788888888887765433
No 2
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}
Probab=42.16 E-value=27 Score=23.60 Aligned_cols=47 Identities=19% Similarity=0.300 Sum_probs=33.8
Q ss_pred HHHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHHhh
Q psy13552 43 HQFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREEED 94 (173)
Q Consensus 43 ~~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~ 94 (173)
..++...+-.+..|+.+|.+. ||+|.+..++.+++++.+.+..-.+.
T Consensus 36 ~~~~~~l~~~~~~vi~~D~~G-----~G~S~~~~~~~~~~~~~~~~~~~l~~ 82 (273)
T d1a8sa_ 36 ESQMIFLAAQGYRVIAHDRRG-----HGRSSQPWSGNDMDTYADDLAQLIEH 82 (273)
T ss_dssp HHHHHHHHHTTCEEEEECCTT-----STTSCCCSSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEechh-----cCccccccccccccchHHHHHHHHHh
Confidence 344554455678999999987 47788888888888887776665443
No 3
>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}
Probab=36.82 E-value=0.44 Score=35.95 Aligned_cols=55 Identities=11% Similarity=0.193 Sum_probs=46.3
Q ss_pred ccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHHhhcccCCCCCCCC
Q psy13552 51 VANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREEEDLVGHRGLLPGT 105 (173)
Q Consensus 51 vaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~l~~~RGL~~~s 105 (173)
+||..|+.+--.++-||+-|.+.|.+-|.=.+++.+++.+=+|-+...-|..|+|
T Consensus 33 LAn~~vl~~K~~~~HWnv~G~~lH~~fee~y~~~~~~~D~iAEri~~lG~~p~~t 87 (171)
T d1zs3a1 33 LSNLFIENIRLTQAGIYAKSPVKCEYLREIAQREVEYFFKISDLLLDENEIVPST 87 (171)
T ss_dssp HHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHcCceeeEChHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4888888888899999999999999988888888888888778877776777665
No 4
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}
Probab=35.14 E-value=39 Score=22.76 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=32.2
Q ss_pred HHHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHHhh
Q psy13552 43 HQFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREEED 94 (173)
Q Consensus 43 ~~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~ 94 (173)
..+++-..-.+..|+.+|-+. ||+|.+...+-+++++.+.+..-.+.
T Consensus 38 ~~~~~~l~~~g~~vi~~D~~G-----~G~s~~~~~~~~~~~~~~~~~~~l~~ 84 (275)
T d1a88a_ 38 DNQMLFFLSHGYRVIAHDRRG-----HGRSDQPSTGHDMDTYAADVAALTEA 84 (275)
T ss_dssp HHHHHHHHHTTCEEEEECCTT-----STTSCCCSSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEeccc-----cccccccccccccccccccccccccc
Confidence 344444444678899999986 56788777777888777766554444
No 5
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}
Probab=34.77 E-value=20 Score=26.82 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=30.0
Q ss_pred hhHHHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHH
Q psy13552 41 GIHQFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLR 90 (173)
Q Consensus 41 p~~~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~r 90 (173)
-+..++..++-.++.|+.+|.+.|| |+|.....+.++.+..+.+..
T Consensus 47 ~~~~~a~~L~~~G~~Vi~~D~rGh~----G~S~g~~~~~~~~~~~~dl~~ 92 (302)
T d1thta_ 47 HFAGLAEYLSTNGFHVFRYDSLHHV----GLSSGSIDEFTMTTGKNSLCT 92 (302)
T ss_dssp GGHHHHHHHHTTTCCEEEECCCBCC------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecCCCCC----CCCCCcccCCCHHHHHHHHHH
Confidence 3567888889999999999998853 788877888888877766543
No 6
>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=34.35 E-value=3.8 Score=31.97 Aligned_cols=24 Identities=25% Similarity=0.422 Sum_probs=18.3
Q ss_pred eeeEeecCCcCCCCccCHHHHHHHHHHHHhh
Q psy13552 64 YGYYIHGRSAHGFADTDMESMATQMLREEED 94 (173)
Q Consensus 64 ~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~ 94 (173)
.|||.||... .++..+.++||.|.
T Consensus 103 ~Gy~~~G~~~-------~d~i~d~iRk~~E~ 126 (243)
T d1tubb1 103 KGHYTEGAEL-------VDSVLDVVRKESES 126 (243)
T ss_dssp HHHTSHHHHH-------HHHHHHHHHHHHHS
T ss_pred eeeeccCHHH-------HHHHHHHHHHHHHh
Confidence 4677766444 48999999999985
No 7
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=31.56 E-value=48 Score=22.27 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=31.3
Q ss_pred HHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHH
Q psy13552 44 QFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREE 92 (173)
Q Consensus 44 ~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~ 92 (173)
.+++-..-.+..|+.+|.+. ||+|.....+-+++++.+.+..=.
T Consensus 41 ~~~~~l~~~g~~vi~~D~~G-----~G~S~~~~~~~~~~~~~~dl~~~l 84 (277)
T d1brta_ 41 RQSAALLDAGYRVITYDRRG-----FGQSSQPTTGYDYDTFAADLNTVL 84 (277)
T ss_dssp HHHHHHHHTTCEEEEECCTT-----STTSCCCSSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEeCCC-----CCcccccccccchhhhhhhhhhhh
Confidence 34444445678999999987 478877777778888877765533
No 8
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=28.31 E-value=43 Score=21.69 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=33.7
Q ss_pred hHHHHhhhhccccceeeeeccceeeEeecCCcCCCCc-cCHHHHHHHHHHHHhhc
Q psy13552 42 IHQFVDLCSVANVSVFILTTENYGYYIHGRSAHGFAD-TDMESMATQMLREEEDL 95 (173)
Q Consensus 42 ~~~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD-~~M~el~~~L~rE~~~l 95 (173)
.+.+++..+-.+..|+..|-+.| |+|.....+ .++.+....+....+..
T Consensus 18 w~~~~~~L~~~g~~vi~~Dl~G~-----G~S~~~~~~~~~~~~~~~~~~~~~~~~ 67 (258)
T d1xkla_ 18 WYKLKPLLEAAGHKVTALDLAAS-----GTDLRKIEELRTLYDYTLPLMELMESL 67 (258)
T ss_dssp GTTHHHHHHHTTCEEEECCCTTS-----TTCCCCGGGCCSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCEEEEecCCCC-----CCCCCCCCCCcchHHHHHHHhhhhhcc
Confidence 35667777777899999999985 577654333 47777776666555443
No 9
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=26.14 E-value=71 Score=21.36 Aligned_cols=45 Identities=11% Similarity=0.052 Sum_probs=29.9
Q ss_pred HHHhhhhccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHHHHh
Q psy13552 44 QFVDLCSVANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLREEE 93 (173)
Q Consensus 44 ~FvDLCSvaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~rE~~ 93 (173)
.+++-..-++..|+.+|.+.| |+|.......++.++.+.+..-.+
T Consensus 37 ~~~~~l~~~g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~dl~~~l~ 81 (274)
T d1a8qa_ 37 DQLKAVVDAGYRGIAHDRRGH-----GHSTPVWDGYDFDTFADDLNDLLT 81 (274)
T ss_dssp HHHHHHHHTTCEEEEECCTTS-----TTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCC-----cccccccccccchhhHHHHHHHHH
Confidence 444444456889999999985 577766666777776665554444
No 10
>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}
Probab=25.07 E-value=7 Score=30.32 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=38.0
Q ss_pred eeeEeecCCcCCCCccCHHHHHHHHHHHHhhcccCCC------CC-------------------CCCCCcEEEEecchHH
Q psy13552 64 YGYYIHGRSAHGFADTDMESMATQMLREEEDLVGHRG------LL-------------------PGTEQQTFEMTVPRQL 118 (173)
Q Consensus 64 ~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~l~~~RG------L~-------------------~~s~~QtFei~l~~~~ 118 (173)
.|||-||+.. .++..+.++||+|.--.--| |. |.....+|-|+.+++.
T Consensus 105 ~Gy~~~G~~~-------~d~i~d~irk~~E~cD~l~gf~i~hSl~GGTGSGlgs~l~e~l~d~yp~~~~~~~~V~P~~~~ 177 (244)
T d2btoa1 105 VGYLGAGREV-------LPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQV 177 (244)
T ss_dssp HHHTSHHHHH-------HHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEEECCCCS
T ss_pred hhcchhHHHH-------HHHHHHHHHHHHHhCCCccceeEeeeeccccccchhhHHHHHHHHHhcCceEEEEEEEecCCC
Confidence 5888888664 58899999999987322211 21 3445778888776655
Q ss_pred H----HHHHHHhhh
Q psy13552 119 R----TYYKRVMAP 128 (173)
Q Consensus 119 R----~~yd~i~~~ 128 (173)
. +-|..++.-
T Consensus 178 ~~~vvqpYNsiLsl 191 (244)
T d2btoa1 178 SSVVTEPYNTVFAL 191 (244)
T ss_dssp SCEESHHHHHHHHH
T ss_pred CcccccccHHHHHH
Confidence 4 666666544
No 11
>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.76 E-value=9.6 Score=29.64 Aligned_cols=25 Identities=12% Similarity=0.316 Sum_probs=19.1
Q ss_pred eeeEeecCCcCCCCccCHHHHHHHHHHHHhhc
Q psy13552 64 YGYYIHGRSAHGFADTDMESMATQMLREEEDL 95 (173)
Q Consensus 64 ~GyYIHGRS~hg~AD~~M~el~~~L~rE~~~l 95 (173)
.|||-||... .++..+.++||+|.-
T Consensus 105 ~Gy~~~G~~~-------~d~i~d~iRk~~E~c 129 (245)
T d1tuba1 105 RGHYTIGKEI-------IDLVLDRIRKLADQC 129 (245)
T ss_dssp TTTTSHHHHT-------THHHHHHHHHHTTSS
T ss_pred hhhhccchhh-------HHHHHHHHHHHHHhC
Confidence 5777776544 589999999999863
No 12
>d1r7ma2 d.95.2.1 (A:121-225) DNA endonuclease I-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.69 E-value=17 Score=24.41 Aligned_cols=74 Identities=7% Similarity=0.135 Sum_probs=49.5
Q ss_pred cceeeeeccce----------eeEeecCCcCCCCccCHHHHHHHHHHHHhhcccCCCCCCC--CCCcEEEEecchHHHHH
Q psy13552 54 VSVFILTTENY----------GYYIHGRSAHGFADTDMESMATQMLREEEDLVGHRGLLPG--TEQQTFEMTVPRQLRTY 121 (173)
Q Consensus 54 ISV~iL~~~~~----------GyYIHGRS~hg~AD~~M~el~~~L~rE~~~l~~~RGL~~~--s~~QtFei~l~~~~R~~ 121 (173)
+++++||+-+. |..+|- ++|+-.+.+-|.+.|+.-= ||... .+.+-|.++++.+=...
T Consensus 18 LA~W~MDDG~~~~~~~~~~~~~i~l~T---~~Ft~~e~~~L~~~L~~kf-------~l~~~i~~~~~~~~i~i~~~s~~~ 87 (105)
T d1r7ma2 18 LAYWFMDDGGKWDYNKNSTNKSIVLNT---QSFTFEEVEYLVKGLRNKF-------QLNCYVKINKNKPIIYIDSMSYLI 87 (105)
T ss_dssp HHHHHHHHEEESCCCTTCCCCCEEECC---TTSCHHHHHHHHHHHHHHH-------CCCEEEEEETTEEEEEECGGGHHH
T ss_pred HHheEecCCccccccccCCCCceEEEe---CCCCHHHHHHHHHHHHHHh-------CceEEEEecCCeEEEEEehhHHHH
Confidence 34556665543 666764 7888777777777765421 22221 13356789999988888
Q ss_pred HHHHhhhhhhccCCCCeE
Q psy13552 122 YKRVMAPLSMALKDLDYQ 139 (173)
Q Consensus 122 yd~i~~~l~h~~~d~dY~ 139 (173)
+.++..| |-+++|.|-
T Consensus 88 ~~~lI~p--yi~psm~YK 103 (105)
T d1r7ma2 88 FYNLIKP--YLIPQMMYK 103 (105)
T ss_dssp HHHHHTT--TCCGGGGGG
T ss_pred HHHHhhh--cCccccccC
Confidence 8888888 777888774
No 13
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}
Probab=21.05 E-value=73 Score=21.36 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=25.6
Q ss_pred ccccceeeeeccceeeEeecCCcCCCCccCHHHHHHHHHH
Q psy13552 51 VANVSVFILTTENYGYYIHGRSAHGFADTDMESMATQMLR 90 (173)
Q Consensus 51 vaNISV~iL~~~~~GyYIHGRS~hg~AD~~M~el~~~L~r 90 (173)
-++..|+.+|.+.| |+|.....+-+++++.+.+..
T Consensus 48 ~~~~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~di~~ 82 (279)
T d1hkha_ 48 AQGYRVITYDRRGF-----GGSSKVNTGYDYDTFAADLHT 82 (279)
T ss_dssp HTTEEEEEECCTTS-----TTSCCCSSCCSHHHHHHHHHH
T ss_pred HCCCEEEEEechhh-----CCccccccccchhhhhhhhhh
Confidence 36788999998885 678777777777776665544
Done!