Query psy13556
Match_columns 127
No_of_seqs 141 out of 1309
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 22:16:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u5m_A Cartilage, alpha 1 type 99.5 2.4E-14 8.1E-19 86.7 6.7 59 61-121 9-68 (73)
2 1u5m_A Cartilage, alpha 1 type 99.5 3E-14 1E-18 86.2 6.3 56 3-59 10-66 (73)
3 3bk3_C Crossveinless 2, bone m 99.2 3.4E-11 1.2E-15 71.4 5.1 55 3-59 10-66 (67)
4 3bk3_C Crossveinless 2, bone m 99.1 9.4E-11 3.2E-15 69.5 4.5 56 61-119 9-66 (67)
5 2cg7_A Fibronectin; signaling 98.0 1E-05 3.5E-10 50.1 5.3 75 1-97 5-90 (90)
6 2rl0_A Fibronectin; 4F15F1, be 97.8 9.6E-05 3.3E-09 45.5 6.7 74 1-96 3-89 (89)
7 2xtt_A Protease inhibitor SGPI 97.8 3.3E-05 1.1E-09 39.8 3.8 30 70-102 5-35 (36)
8 3ejh_A Fibronectin; fibronecti 97.6 0.00052 1.8E-08 42.5 8.3 74 3-98 3-88 (93)
9 1wo9_A HI-1, trypsin inhibitor 97.3 0.00018 6.1E-09 36.9 2.8 29 70-101 5-34 (35)
10 1gl0_I Protease inhibitor LCMI 97.2 0.00061 2.1E-08 34.6 4.1 29 70-101 5-34 (35)
11 1o9a_A Fibronectin; cell adhes 97.2 0.00043 1.5E-08 42.8 3.8 75 4-96 6-90 (93)
12 2xtt_A Protease inhibitor SGPI 97.1 0.0005 1.7E-08 35.4 3.3 29 11-41 5-34 (36)
13 1xhh_A Beta-microseminoprotein 96.8 0.0012 4.1E-08 40.9 3.3 35 1-37 15-49 (91)
14 3ix0_A Beta-microseminoprotein 96.4 0.0027 9.2E-08 39.6 3.2 35 1-37 18-52 (94)
15 1wo9_A HI-1, trypsin inhibitor 96.1 0.005 1.7E-07 31.4 2.7 29 11-41 5-34 (35)
16 1gl0_I Protease inhibitor LCMI 96.0 0.011 3.8E-07 29.9 3.6 29 11-41 5-34 (35)
17 3tvj_I Protease inhibitor SGPI 95.1 0.022 7.6E-07 29.3 3.0 29 69-100 7-37 (38)
18 1o9a_A Fibronectin; cell adhes 93.8 0.028 9.4E-07 34.7 1.8 36 1-36 50-90 (93)
19 3ejh_A Fibronectin; fibronecti 93.6 0.082 2.8E-06 32.6 3.6 38 1-38 46-88 (93)
20 3tvj_I Protease inhibitor SGPI 93.3 0.071 2.4E-06 27.4 2.5 31 8-40 5-37 (38)
21 1xhh_A Beta-microseminoprotein 92.9 0.14 4.8E-06 31.5 4.0 34 61-96 14-48 (91)
22 3m7p_A FN1 protein; fibronecti 92.7 0.14 4.8E-06 38.3 4.4 73 3-97 222-306 (308)
23 3ix0_A Beta-microseminoprotein 91.6 0.25 8.5E-06 30.6 3.9 33 61-95 17-50 (94)
24 2cg7_A Fibronectin; signaling 91.3 0.26 9E-06 30.2 3.8 35 3-37 49-90 (90)
25 2rl0_A Fibronectin; 4F15F1, be 86.2 0.85 2.9E-05 27.8 3.5 36 1-36 48-89 (89)
26 2ec3_A Fibronectin; complement 82.3 0.82 2.8E-05 26.4 2.1 37 61-97 19-60 (68)
27 2h9e_C Anti-coagulant protein 41.5 4.3 0.00015 24.2 -0.5 23 51-74 61-83 (84)
28 3m7p_A FN1 protein; fibronecti 31.6 29 0.001 25.8 2.5 33 5-37 15-49 (308)
29 2j5h_A Teratocarcinoma-derived 30.5 12 0.0004 19.3 0.1 22 15-37 12-33 (41)
30 3g1j_A Integron cassette prote 22.6 41 0.0014 20.4 1.6 14 4-17 28-41 (93)
No 1
>1u5m_A Cartilage, alpha 1 type II collagen isoform 1; disulfide bonds, two SUB-domain architecture, beta-sheet, structural protein; NMR {Homo sapiens} SCOP: g.27.1.2
Probab=99.53 E-value=2.4e-14 Score=86.69 Aligned_cols=59 Identities=27% Similarity=0.727 Sum_probs=53.8
Q ss_pred cceeCCEEecCCCeEeCCCCCCeeeEEcCCcEEEEeccCCCC-CCCCCccCCCCcCCCCCCC
Q psy13556 61 ECEHNGKVYNNGEKLNSTLTPCQVCYCRGGALMCTHFTCFTR-DDCQGRTLPGTCCPNYDHC 121 (127)
Q Consensus 61 ~C~~~g~~y~~g~~~~~~~~~C~~C~C~~g~~~C~~~~C~~~-~~~~~~~~~g~CCp~C~~c 121 (127)
.|.++|++|++|++|++ ++|++|+|.+|.+.|..+.|+++ .|.++...+|+|||+|++=
T Consensus 9 ~C~~~G~~y~~ge~W~~--d~C~~C~C~~G~v~C~~~~Cp~~~~C~~p~~~~GeCCPvC~~~ 68 (73)
T 1u5m_A 9 SCVQDGQRYNDKDVWKP--EPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPICPAD 68 (73)
T ss_dssp CEESSSCEECSSCEECS--CSSEEEEEETTEEEEEECCCSCCSSCSCCCCCSSCSCCSCCSS
T ss_pred CeeECCEEEcCCCEECC--cCcCceECCCCcEEeccccCCCccCCCCCcccCCCcCCCCCCc
Confidence 69999999999999996 88999999999999999999998 6666888999999999753
No 2
>1u5m_A Cartilage, alpha 1 type II collagen isoform 1; disulfide bonds, two SUB-domain architecture, beta-sheet, structural protein; NMR {Homo sapiens} SCOP: g.27.1.2
Probab=99.51 E-value=3e-14 Score=86.23 Aligned_cols=56 Identities=25% Similarity=0.526 Sum_probs=52.3
Q ss_pred eeeCCEEecCCCEecCCCCceeeEEcCCcEeeeccCCCCC-CCCccccCCCCcccccC
Q psy13556 3 DERGGGVFRSGELVPRFGPCEECRCTDGTVVCSMMQCEIK-PGCQTIQRPNQCCPEFK 59 (127)
Q Consensus 3 ~~~~G~~y~~g~~~~~~~~C~~C~C~~g~v~C~~~~C~~~-~c~~~~~~~g~CCp~c~ 59 (127)
+.|+|+.|++|++|. .++|..|+|++|.|.|..+.|+.+ +|.++++.+|+|||.|.
T Consensus 10 C~~~G~~y~~ge~W~-~d~C~~C~C~~G~v~C~~~~Cp~~~~C~~p~~~~GeCCPvC~ 66 (73)
T 1u5m_A 10 CVQDGQRYNDKDVWK-PEPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPICP 66 (73)
T ss_dssp EESSSCEECSSCEEC-SCSSEEEEEETTEEEEEECCCSCCSSCSCCCCCSSCSCCSCC
T ss_pred eeECCEEEcCCCEEC-CcCcCceECCCCcEEeccccCCCccCCCCCcccCCCcCCCCC
Confidence 568999999999997 588999999999999999999998 89999999999999985
No 3
>3bk3_C Crossveinless 2, bone morphogenetic protein 2; TGF-beta superfamily, BMP modulator proteins, chordin, BMP inhibitor, chondrogenesis; 2.70A {Danio rerio}
Probab=99.18 E-value=3.4e-11 Score=71.43 Aligned_cols=55 Identities=22% Similarity=0.550 Sum_probs=47.8
Q ss_pred eeeCCEEecCCCEecCCCCceeeEEcCCcEeeeccCCCCCC--CCccccCCCCcccccC
Q psy13556 3 DERGGGVFRSGELVPRFGPCEECRCTDGTVVCSMMQCEIKP--GCQTIQRPNQCCPEFK 59 (127)
Q Consensus 3 ~~~~G~~y~~g~~~~~~~~C~~C~C~~g~v~C~~~~C~~~~--c~~~~~~~g~CCp~c~ 59 (127)
+.++|++|+.+. |. .++|+.|+|++|.|+|.++.||+++ |..+++.+|+|||+|.
T Consensus 10 C~~eGe~~~~~~-~~-~~~C~~C~C~~G~v~C~~~~CP~l~~~C~~~~~~~g~CCp~C~ 66 (67)
T 3bk3_C 10 CENEGEVLHIPN-IT-DNPCISCVCLNQKAECKQEKCAPLAEDCALVVKQTGACCEKCK 66 (67)
T ss_dssp CSSTTCEECCTT-TT-TSTTEEEEECSSBEEEEECCCCCCCTTCCCEECCTTCSSCEEC
T ss_pred eEECCEEEeCCC-cc-CCCcceeEecCCceEEccccCCCCccccCCcccCCCCcCcCcC
Confidence 467888888764 54 5899999999999999999999998 7788889999999974
No 4
>3bk3_C Crossveinless 2, bone morphogenetic protein 2; TGF-beta superfamily, BMP modulator proteins, chordin, BMP inhibitor, chondrogenesis; 2.70A {Danio rerio}
Probab=99.10 E-value=9.4e-11 Score=69.50 Aligned_cols=56 Identities=23% Similarity=0.555 Sum_probs=47.9
Q ss_pred cceeCCEEecCCCeEeCCCCCCeeeEEcCCcEEEEeccCCCCC--CCCCccCCCCcCCCCC
Q psy13556 61 ECEHNGKVYNNGEKLNSTLTPCQVCYCRGGALMCTHFTCFTRD--DCQGRTLPGTCCPNYD 119 (127)
Q Consensus 61 ~C~~~g~~y~~g~~~~~~~~~C~~C~C~~g~~~C~~~~C~~~~--~~~~~~~~g~CCp~C~ 119 (127)
.|.++|++|+++. |. .++|+.|+|++|.++|.++.||++. +..++..+|+|||+|.
T Consensus 9 ~C~~eGe~~~~~~-~~--~~~C~~C~C~~G~v~C~~~~CP~l~~~C~~~~~~~g~CCp~C~ 66 (67)
T 3bk3_C 9 SCENEGEVLHIPN-IT--DNPCISCVCLNQKAECKQEKCAPLAEDCALVVKQTGACCEKCK 66 (67)
T ss_dssp BCSSTTCEECCTT-TT--TSTTEEEEECSSBEEEEECCCCCCCTTCCCEECCTTCSSCEEC
T ss_pred ceEECCEEEeCCC-cc--CCCcceeEecCCceEEccccCCCCccccCCcccCCCCcCcCcC
Confidence 5888999998764 55 4899999999999999999999987 4457788999999985
No 5
>2cg7_A Fibronectin; signaling protein, 2F13F1, acute phase, alternative splicing, cell adhesion, glycoprotein, heparin-binding, phosphorylation; 1.2A {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 2cg6_A 2cku_A 2rkz_A 3cal_A 3zrz_A
Probab=98.02 E-value=1e-05 Score=50.09 Aligned_cols=75 Identities=24% Similarity=0.650 Sum_probs=54.2
Q ss_pred CeeeeCCEEecCCCEec-CCCC-ceeeEEcC---CcEeeeccCCCCCCCCccccCCCCcccccCccceeCCEEecCCCeE
Q psy13556 1 CIDERGGGVFRSGELVP-RFGP-CEECRCTD---GTVVCSMMQCEIKPGCQTIQRPNQCCPEFKCECEHNGKVYNNGEKL 75 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~-~~~~-C~~C~C~~---g~v~C~~~~C~~~~c~~~~~~~g~CCp~c~~~C~~~g~~y~~g~~~ 75 (127)
|.|.++|..|+.||.|. ..+. =..|+|+. |.+.|.... .|..+|+.|+-|++|
T Consensus 5 C~D~~tg~sY~VGe~Wer~~~~~~~~CtC~G~G~G~~~C~s~~----------------------~C~~~g~~Y~IGetW 62 (90)
T 2cg7_A 5 CFDKYTGNTYRVGDTYERPKDSMIWDCTCIGAGRGRISCTIAN----------------------RCHEGGQSYKIGDTW 62 (90)
T ss_dssp EECTTTCCEEETTCEEEEEETTEEEEEEEEETTTTEEEEECTT----------------------EEEETTEEEETTCEE
T ss_pred eEcCCCCeEeecCCeeeEccCCcEEEEEEecCCCceEEECCcc----------------------eeeeCCcEEecCceE
Confidence 67888999999999994 2232 12588863 778888421 478899999999999
Q ss_pred eCCCC---CCeeeEEcC---CcEEEEec
Q psy13556 76 NSTLT---PCQVCYCRG---GALMCTHF 97 (127)
Q Consensus 76 ~~~~~---~C~~C~C~~---g~~~C~~~ 97 (127)
.-..+ -=..|+|.. |.|+|.++
T Consensus 63 ~k~~~~~~~~~~CtClGngkGew~C~p~ 90 (90)
T 2cg7_A 63 RRPHETGGYMLECVCLGNGKGEWTCKPI 90 (90)
T ss_dssp EEECTTSSSEEEEEEEETTTTEEEEEEC
T ss_pred eeccccCCceEEEEEeCCCcccEEeeeC
Confidence 74212 145899953 67998764
No 6
>2rl0_A Fibronectin; 4F15F1, beta zipper, staphylococcus aureus, acute phase, alternative splicing, cell adhesion, extracellular matrix; 2.00A {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 1fbr_A 2rky_A
Probab=97.79 E-value=9.6e-05 Score=45.53 Aligned_cols=74 Identities=23% Similarity=0.619 Sum_probs=52.2
Q ss_pred CeeeeCCEEecCCCEec-CCCC-c-eeeEEc---CCcEeeeccCCCCCCCCccccCCCCcccccCccceeC--CEEecCC
Q psy13556 1 CIDERGGGVFRSGELVP-RFGP-C-EECRCT---DGTVVCSMMQCEIKPGCQTIQRPNQCCPEFKCECEHN--GKVYNNG 72 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~-~~~~-C-~~C~C~---~g~v~C~~~~C~~~~c~~~~~~~g~CCp~c~~~C~~~--g~~y~~g 72 (127)
|.|.++|..|+.|++|. +.+. - ..|+|+ .|.|.|.... .|.-+ |+.|+-|
T Consensus 3 CyD~~~g~~Y~VGe~wer~~~~g~~~~CTC~G~G~G~~~C~s~~----------------------~C~D~~tG~~Y~iG 60 (89)
T 2rl0_A 3 CFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRN----------------------RCNDQDTRTSYRIG 60 (89)
T ss_dssp EEETTTTEEEETTCEEEEEETTTEEEEEEEEETTTTEEEEECTT----------------------EEEETTTTEEEETT
T ss_pred ceECCCCcEEecCceeeEccCCCeEEEeEEcCCCcceEEeCCCC----------------------cccccCCceEEEcC
Confidence 67888999999999994 2232 4 468896 3568887732 35554 8999999
Q ss_pred CeEeC--CCCCCeeeEEcC---CcEEEEe
Q psy13556 73 EKLNS--TLTPCQVCYCRG---GALMCTH 96 (127)
Q Consensus 73 ~~~~~--~~~~C~~C~C~~---g~~~C~~ 96 (127)
++|+- ....=.+|+|.. |.|.|.+
T Consensus 61 etW~k~~~~G~~~~C~C~GngrGew~Ce~ 89 (89)
T 2rl0_A 61 DTWSKKDNRGNLLQCICTGNGRGEWKCER 89 (89)
T ss_dssp CEEEEECSSSCEEEEEEEETTTTEEEEEC
T ss_pred ceeecCccCCcEEEEEEeCCCceeEEecC
Confidence 99972 223346788853 7788863
No 7
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=97.77 E-value=3.3e-05 Score=39.84 Aligned_cols=30 Identities=27% Similarity=0.752 Sum_probs=26.8
Q ss_pred cCCCeEeCCCCCCeeeEEc-CCcEEEEeccCCCC
Q psy13556 70 NNGEKLNSTLTPCQVCYCR-GGALMCTHFTCFTR 102 (127)
Q Consensus 70 ~~g~~~~~~~~~C~~C~C~-~g~~~C~~~~C~~~ 102 (127)
.+|++|+ ++|++|+|. +|.|.|++..|++.
T Consensus 5 ~pG~~~~---~dCNtC~C~~~G~W~CT~~~Cp~~ 35 (36)
T 2xtt_A 5 EPGQTKK---QDCNTCRCGSDGVWACTRMGCPPH 35 (36)
T ss_dssp CTTCEEE---ETTEEEEECTTSCEEEECCCCCCC
T ss_pred CCCCEEE---CCCCccCCCCCCEEeeeCCcCCCC
Confidence 4789998 799999999 99999999999863
No 8
>3ejh_A Fibronectin; fibronectin, protein complex, collagenase site, AC phase, cell adhesion, disease mutation; HET: NAG; 2.10A {Homo sapiens} PDB: 3gxe_B*
Probab=97.64 E-value=0.00052 Score=42.46 Aligned_cols=74 Identities=19% Similarity=0.473 Sum_probs=53.1
Q ss_pred eeeCCEEecCCCEec-CC-CCc-eeeEEc-C--CcEeeeccCCCCCCCCccccCCCCcccccCccce--eCCEEecCCCe
Q psy13556 3 DERGGGVFRSGELVP-RF-GPC-EECRCT-D--GTVVCSMMQCEIKPGCQTIQRPNQCCPEFKCECE--HNGKVYNNGEK 74 (127)
Q Consensus 3 ~~~~G~~y~~g~~~~-~~-~~C-~~C~C~-~--g~v~C~~~~C~~~~c~~~~~~~g~CCp~c~~~C~--~~g~~y~~g~~ 74 (127)
+..+|..|+.|++|. +. ..- ..|+|. + |.+.|.+.. .|. .+|..|+.|++
T Consensus 3 C~~~g~~Y~VG~~w~k~~e~G~mm~CTC~G~GrG~wkC~~~d----------------------~C~D~~~g~~Y~IGet 60 (93)
T 3ejh_A 3 CIVDDITYNVQDTFHKKHEEGHMLNCTCFGQGRGRWKCDPVD----------------------QCQDSETGTFYQIGDS 60 (93)
T ss_dssp EEETTEEEETTEEEEEECTTSCEEEEEEEETTTTEEEEEECS----------------------EEECTTTCCEEETTCE
T ss_pred cEECCcEEecCCEEEecccCCCEEEeEEcCCCcccEEecCCc----------------------cCCccCCCcEeecCCe
Confidence 567999999999994 22 223 489996 3 568888731 344 57999999999
Q ss_pred EeC-CCCCCeeeEEcC---CcEEEEecc
Q psy13556 75 LNS-TLTPCQVCYCRG---GALMCTHFT 98 (127)
Q Consensus 75 ~~~-~~~~C~~C~C~~---g~~~C~~~~ 98 (127)
|.- ....=..|+|.. |.|.|.++.
T Consensus 61 W~k~~~G~~~~CtC~G~G~G~w~Cep~~ 88 (93)
T 3ejh_A 61 WEKYVHGVRYQCYCYGRGIGEWHCQPLQ 88 (93)
T ss_dssp EEECCTTCCEEEEEEETTTTEEEEEECC
T ss_pred EeeccCCeEEEeEEEcCCceeEEecccc
Confidence 973 223346889953 789998764
No 9
>1wo9_A HI-1, trypsin inhibitor; hydrolase inhibitor; NMR {Synthetic} SCOP: g.4.1.1
Probab=97.32 E-value=0.00018 Score=36.88 Aligned_cols=29 Identities=31% Similarity=0.716 Sum_probs=26.0
Q ss_pred cCCCeEeCCCCCCeeeEEc-CCcEEEEeccCCC
Q psy13556 70 NNGEKLNSTLTPCQVCYCR-GGALMCTHFTCFT 101 (127)
Q Consensus 70 ~~g~~~~~~~~~C~~C~C~-~g~~~C~~~~C~~ 101 (127)
.+|++++ .+|++|+|. +|.|.|+...|+.
T Consensus 5 ~pG~ti~---~dCNtCtC~~~g~W~CT~~~C~~ 34 (35)
T 1wo9_A 5 TPGQTKK---QDCNTCTCTPTGIWGCTRKACRT 34 (35)
T ss_dssp CTTCEEE---ETTEEEEECTTSCEECCCSSSSC
T ss_pred CCCCEEE---CCCCceECCCCCEEcCCCCCCCC
Confidence 5789998 699999999 9999999998874
No 10
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=97.22 E-value=0.00061 Score=34.58 Aligned_cols=29 Identities=28% Similarity=0.686 Sum_probs=25.6
Q ss_pred cCCCeEeCCCCCCeeeEEcC-CcEEEEeccCCC
Q psy13556 70 NNGEKLNSTLTPCQVCYCRG-GALMCTHFTCFT 101 (127)
Q Consensus 70 ~~g~~~~~~~~~C~~C~C~~-g~~~C~~~~C~~ 101 (127)
.+|++|+ +.|+.|+|.+ |.|.|+.+.|.+
T Consensus 5 ~PG~~~k---~~CN~C~C~~~G~~~CTlk~C~P 34 (35)
T 1gl0_I 5 TPGQVKQ---QDCNTCTCTPTGVWGCTLMGCQP 34 (35)
T ss_dssp CTTCEEE---CSSCEEEECTTSCEEEECCCCCC
T ss_pred CCCcccc---cCCCccCCCCCCeEEEEeecccC
Confidence 4799999 7999999977 999999998865
No 11
>1o9a_A Fibronectin; cell adhesion/complex, HOST-pathogen protein complex, cell adhesion; NMR {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 1qgb_A
Probab=97.16 E-value=0.00043 Score=42.82 Aligned_cols=75 Identities=19% Similarity=0.360 Sum_probs=48.2
Q ss_pred eeCCEEecCCCEec-CCCCc-eeeEEcC-C-cEeeeccCCCCCCCCccccCCCCcccccCccce--eCCEEecCCCeEe-
Q psy13556 4 ERGGGVFRSGELVP-RFGPC-EECRCTD-G-TVVCSMMQCEIKPGCQTIQRPNQCCPEFKCECE--HNGKVYNNGEKLN- 76 (127)
Q Consensus 4 ~~~G~~y~~g~~~~-~~~~C-~~C~C~~-g-~v~C~~~~C~~~~c~~~~~~~g~CCp~c~~~C~--~~g~~y~~g~~~~- 76 (127)
..+|+.|+.|+.|. +.... ..|+|.. + .+.|... | . + ...|. ++|+.|..|++|.
T Consensus 6 ~d~G~~Y~iGeqWer~~~G~~l~CTC~G~g~G~~C~sk--P-------~--a-------ee~C~Dk~~G~~Y~VGetwer 67 (93)
T 1o9a_A 6 YDNGKHYQINQQWERTYLGNALVCTCYGGSRGFNCESK--P-------E--A-------EETCFDKYTGNTYRVGDTYER 67 (93)
T ss_dssp BCSSCBCCTTCEEEEEETTEEEEEEECSSTTCEEEEEC--C-------C--S-------SCEEEETTTTEEEETTCBCCE
T ss_pred EcCCeEeecCCEEeeccCCCEEEEEEcCCCcceEecCC--C-------C--c-------ccccccCCCccEeecCCeEEe
Confidence 45799999999994 23333 4899964 3 2888651 0 0 0 11355 4799999999996
Q ss_pred CCCCCCeeeEEcC---CcEEEEe
Q psy13556 77 STLTPCQVCYCRG---GALMCTH 96 (127)
Q Consensus 77 ~~~~~C~~C~C~~---g~~~C~~ 96 (127)
+.+.-=..|+|.. |.|.|+.
T Consensus 68 ~~~g~~~~CtC~G~G~G~~~Ct~ 90 (93)
T 1o9a_A 68 PKDSMIWDCTCIGAGRGRISCTI 90 (93)
T ss_dssp EETTEEECCEECCTTTCCEECBB
T ss_pred ccCCeEEEEEEeCCCceEEEEEe
Confidence 3332235688854 7788764
No 12
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=97.14 E-value=0.0005 Score=35.36 Aligned_cols=29 Identities=34% Similarity=0.856 Sum_probs=26.1
Q ss_pred cCCCEecCCCCceeeEEc-CCcEeeeccCCCC
Q psy13556 11 RSGELVPRFGPCEECRCT-DGTVVCSMMQCEI 41 (127)
Q Consensus 11 ~~g~~~~~~~~C~~C~C~-~g~v~C~~~~C~~ 41 (127)
.+|++|. +.|..|+|. +|.+.|++..||.
T Consensus 5 ~pG~~~~--~dCNtC~C~~~G~W~CT~~~Cp~ 34 (36)
T 2xtt_A 5 EPGQTKK--QDCNTCRCGSDGVWACTRMGCPP 34 (36)
T ss_dssp CTTCEEE--ETTEEEEECTTSCEEEECCCCCC
T ss_pred CCCCEEE--CCCCccCCCCCCEEeeeCCcCCC
Confidence 5899997 669999999 9999999999985
No 13
>1xhh_A Beta-microseminoprotein; beta srands, novel fold, prostatic secretory protein, solution structure, Na+, K+ ATPase inhibitor, unknown function; NMR {Sus scrofa} PDB: 2iz4_A
Probab=96.76 E-value=0.0012 Score=40.86 Aligned_cols=35 Identities=26% Similarity=0.556 Sum_probs=30.2
Q ss_pred CeeeeCCEEecCCCEecCCCCceeeEEcCCcEeeecc
Q psy13556 1 CIDERGGGVFRSGELVPRFGPCEECRCTDGTVVCSMM 37 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~~~~~C~~C~C~~g~v~C~~~ 37 (127)
|.| ++|+.+..|++|. .+.|..|.|.+..+.|-..
T Consensus 15 C~D-~~G~kh~l~s~W~-T~dC~~C~C~~~Gi~CC~~ 49 (91)
T 1xhh_A 15 CQD-LKGVSHPLNSVWK-TKDCEECTCGQDAISCCNT 49 (91)
T ss_dssp EEE-TTTEEEECCCCEE-CSSSEEEEECSSEEEEEEC
T ss_pred CCc-CCCcEEeCCCeEC-CCCceEeEecCCCcEeecC
Confidence 567 8999999999998 5779999999888887764
No 14
>3ix0_A Beta-microseminoprotein; beta sheet, greek KEY motif, alternative splicing, disulfide bond, polymorphism, secreted, protein binding; 2.30A {Homo sapiens} PDB: 2iz3_A
Probab=96.39 E-value=0.0027 Score=39.56 Aligned_cols=35 Identities=23% Similarity=0.597 Sum_probs=29.1
Q ss_pred CeeeeCCEEecCCCEecCCCCceeeEEcCCcEeeecc
Q psy13556 1 CIDERGGGVFRSGELVPRFGPCEECRCTDGTVVCSMM 37 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~~~~~C~~C~C~~g~v~C~~~ 37 (127)
|.|. +|+.|..|++|. .+.|..|+|.+..+.|-..
T Consensus 18 C~D~-dG~~h~l~S~W~-T~~C~~C~C~~~Gi~CC~~ 52 (94)
T 3ix0_A 18 CMDL-KGNKHPINSEWQ-TDNCETCTCYETEISCCTL 52 (94)
T ss_dssp EECT-TSCEECTTCEEE-CTTSEEEEECSSEEEEEEC
T ss_pred CCCC-CCCEEeCCCEEC-CCCCcEeEecCCCceeccC
Confidence 5674 999999999998 5779999998777777653
No 15
>1wo9_A HI-1, trypsin inhibitor; hydrolase inhibitor; NMR {Synthetic} SCOP: g.4.1.1
Probab=96.09 E-value=0.005 Score=31.37 Aligned_cols=29 Identities=28% Similarity=0.712 Sum_probs=25.6
Q ss_pred cCCCEecCCCCceeeEEc-CCcEeeeccCCCC
Q psy13556 11 RSGELVPRFGPCEECRCT-DGTVVCSMMQCEI 41 (127)
Q Consensus 11 ~~g~~~~~~~~C~~C~C~-~g~v~C~~~~C~~ 41 (127)
.+|+++. ..|..|+|. +|.+.|....|+.
T Consensus 5 ~pG~ti~--~dCNtCtC~~~g~W~CT~~~C~~ 34 (35)
T 1wo9_A 5 TPGQTKK--QDCNTCTCTPTGIWGCTRKACRT 34 (35)
T ss_dssp CTTCEEE--ETTEEEEECTTSCEECCCSSSSC
T ss_pred CCCCEEE--CCCCceECCCCCEEcCCCCCCCC
Confidence 5899997 679999999 9999999998874
No 16
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=95.98 E-value=0.011 Score=29.91 Aligned_cols=29 Identities=31% Similarity=0.850 Sum_probs=25.1
Q ss_pred cCCCEecCCCCceeeEEcC-CcEeeeccCCCC
Q psy13556 11 RSGELVPRFGPCEECRCTD-GTVVCSMMQCEI 41 (127)
Q Consensus 11 ~~g~~~~~~~~C~~C~C~~-g~v~C~~~~C~~ 41 (127)
.+|++|. +.|..|+|.+ |...|..+.|.+
T Consensus 5 ~PG~~~k--~~CN~C~C~~~G~~~CTlk~C~P 34 (35)
T 1gl0_I 5 TPGQVKQ--QDCNTCTCTPTGVWGCTLMGCQP 34 (35)
T ss_dssp CTTCEEE--CSSCEEEECTTSCEEEECCCCCC
T ss_pred CCCcccc--cCCCccCCCCCCeEEEEeecccC
Confidence 5899998 6799999986 889999998864
No 17
>3tvj_I Protease inhibitor SGPI-2; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Schistocerca gregaria} PDB: 4djz_H 1kgm_A 1gl1_I 1pmc_A
Probab=95.14 E-value=0.022 Score=29.32 Aligned_cols=29 Identities=28% Similarity=0.795 Sum_probs=23.6
Q ss_pred ecCCCeEeCCCCCCeeeEEcC-Cc-EEEEeccCC
Q psy13556 69 YNNGEKLNSTLTPCQVCYCRG-GA-LMCTHFTCF 100 (127)
Q Consensus 69 y~~g~~~~~~~~~C~~C~C~~-g~-~~C~~~~C~ 100 (127)
-.+|++|+ +.|++|+|.. |. ..|+.+.||
T Consensus 7 C~Pg~tFk---~~CNtC~C~~dG~~a~CT~k~Cp 37 (38)
T 3tvj_I 7 CEPGTTFK---DKCNTCRCGSDGKSAVCTKLWCN 37 (38)
T ss_dssp CCTTCEEE---ETTEEEEECTTSSCEEEECCEEC
T ss_pred cCCCCeee---ccCceeECCCCCceeEeecccCC
Confidence 35799999 7999999965 55 589988776
No 18
>1o9a_A Fibronectin; cell adhesion/complex, HOST-pathogen protein complex, cell adhesion; NMR {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 1qgb_A
Probab=93.77 E-value=0.028 Score=34.72 Aligned_cols=36 Identities=25% Similarity=0.715 Sum_probs=25.8
Q ss_pred CeeeeCCEEecCCCEec-CCCC-ceeeEEc---CCcEeeec
Q psy13556 1 CIDERGGGVFRSGELVP-RFGP-CEECRCT---DGTVVCSM 36 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~-~~~~-C~~C~C~---~g~v~C~~ 36 (127)
|+|.++|+.|+.||+|. +.+. =-.|+|. +|.|+|..
T Consensus 50 C~Dk~~G~~Y~VGetwer~~~g~~~~CtC~G~G~G~~~Ct~ 90 (93)
T 1o9a_A 50 CFDKYTGNTYRVGDTYERPKDSMIWDCTCIGAGRGRISCTI 90 (93)
T ss_dssp EEETTTTEEEETTCBCCEEETTEEECCEECCTTTCCEECBB
T ss_pred cccCCCccEeecCCeEEeccCCeEEEEEEeCCCceEEEEEe
Confidence 57778999999999994 2222 1267785 46788875
No 19
>3ejh_A Fibronectin; fibronectin, protein complex, collagenase site, AC phase, cell adhesion, disease mutation; HET: NAG; 2.10A {Homo sapiens} PDB: 3gxe_B*
Probab=93.57 E-value=0.082 Score=32.56 Aligned_cols=38 Identities=24% Similarity=0.500 Sum_probs=27.6
Q ss_pred CeeeeCCEEecCCCEecC-CC-CceeeEEc---CCcEeeeccC
Q psy13556 1 CIDERGGGVFRSGELVPR-FG-PCEECRCT---DGTVVCSMMQ 38 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~~-~~-~C~~C~C~---~g~v~C~~~~ 38 (127)
|+|..+|+.|+.|++|.. .+ .=..|+|. .|.+.|.++.
T Consensus 46 C~D~~~g~~Y~IGetW~k~~~G~~~~CtC~G~G~G~w~Cep~~ 88 (93)
T 3ejh_A 46 CQDSETGTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQPLQ 88 (93)
T ss_dssp EECTTTCCEEETTCEEEECCTTCCEEEEEEETTTTEEEEEECC
T ss_pred CCccCCCcEeecCCeEeeccCCeEEEeEEEcCCceeEEecccc
Confidence 567789999999999942 11 22478885 4679998864
No 20
>3tvj_I Protease inhibitor SGPI-2; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Schistocerca gregaria} PDB: 4djz_H 1kgm_A 1gl1_I 1pmc_A
Probab=93.27 E-value=0.071 Score=27.42 Aligned_cols=31 Identities=32% Similarity=0.847 Sum_probs=24.8
Q ss_pred EEecCCCEecCCCCceeeEEc-CCc-EeeeccCCC
Q psy13556 8 GVFRSGELVPRFGPCEECRCT-DGT-VVCSMMQCE 40 (127)
Q Consensus 8 ~~y~~g~~~~~~~~C~~C~C~-~g~-v~C~~~~C~ 40 (127)
..=.+|++|. +.|..|+|. +|. ..|....||
T Consensus 5 ~~C~Pg~tFk--~~CNtC~C~~dG~~a~CT~k~Cp 37 (38)
T 3tvj_I 5 VTCEPGTTFK--DKCNTCRCGSDGKSAVCTKLWCN 37 (38)
T ss_dssp CCCCTTCEEE--ETTEEEEECTTSSCEEEECCEEC
T ss_pred cccCCCCeee--ccCceeECCCCCceeEeecccCC
Confidence 3446899998 789999997 465 689998887
No 21
>1xhh_A Beta-microseminoprotein; beta srands, novel fold, prostatic secretory protein, solution structure, Na+, K+ ATPase inhibitor, unknown function; NMR {Sus scrofa} PDB: 2iz4_A
Probab=92.91 E-value=0.14 Score=31.50 Aligned_cols=34 Identities=24% Similarity=0.560 Sum_probs=28.6
Q ss_pred cce-eCCEEecCCCeEeCCCCCCeeeEEcCCcEEEEe
Q psy13556 61 ECE-HNGKVYNNGEKLNSTLTPCQVCYCRGGALMCTH 96 (127)
Q Consensus 61 ~C~-~~g~~y~~g~~~~~~~~~C~~C~C~~g~~~C~~ 96 (127)
.|. ++|+.+.-|++|+ .+.|..|+|.+..+.|-.
T Consensus 14 ~C~D~~G~kh~l~s~W~--T~dC~~C~C~~~Gi~CC~ 48 (91)
T 1xhh_A 14 ECQDLKGVSHPLNSVWK--TKDCEECTCGQDAISCCN 48 (91)
T ss_dssp EEEETTTEEEECCCCEE--CSSSEEEEECSSEEEEEE
T ss_pred CCCcCCCcEEeCCCeEC--CCCceEeEecCCCcEeec
Confidence 477 8999999999999 489999999876666543
No 22
>3m7p_A FN1 protein; fibronectin, extracellular matrix, modular protein, zinc BIN dimer, conformational change, cell adhesion; HET: NAG 12P; 2.50A {Homo sapiens} PDB: 3mql_A* 1e88_A* 1e8b_A* 1qo6_A 2fn2_A*
Probab=92.68 E-value=0.14 Score=38.27 Aligned_cols=73 Identities=19% Similarity=0.464 Sum_probs=47.4
Q ss_pred eeeCCEEecCCCEecCC-CC--ceeeEEc---CCcEeeeccCCCCCCCCccccCCCCcccccCccce--eCCEEecCCCe
Q psy13556 3 DERGGGVFRSGELVPRF-GP--CEECRCT---DGTVVCSMMQCEIKPGCQTIQRPNQCCPEFKCECE--HNGKVYNNGEK 74 (127)
Q Consensus 3 ~~~~G~~y~~g~~~~~~-~~--C~~C~C~---~g~v~C~~~~C~~~~c~~~~~~~g~CCp~c~~~C~--~~g~~y~~g~~ 74 (127)
+..+|+.|+.|++|... +. =..|+|. .|.+.|.+.. .|. .+|+.|..|++
T Consensus 222 C~~~g~~y~vg~~w~k~~e~G~~~~CtC~G~G~G~w~C~~~d----------------------~C~~~~~~~~y~vg~~ 279 (308)
T 3m7p_A 222 CIVDDITYNVNDTFHKRHEEGHMLNCTCFGQGRGRWKCDPVD----------------------QCQDSETGTFYQIGDS 279 (308)
T ss_dssp EEEEEEEEECCCSSCCCEEEEEEEEEEC-------CEEECBC----------------------EEECTTTCCEEETTCE
T ss_pred EEeCCeEEEcCceeeccccCCceEEEEEeCCCccCEEeecch----------------------hhccCCCCcEEEcCCc
Confidence 44688999999999621 11 1367785 3568888751 355 37999999999
Q ss_pred EeCC-CCCCeeeEEcC---CcEEEEec
Q psy13556 75 LNST-LTPCQVCYCRG---GALMCTHF 97 (127)
Q Consensus 75 ~~~~-~~~C~~C~C~~---g~~~C~~~ 97 (127)
|... ..-=..|+|.. |.|.|.++
T Consensus 280 w~k~~~g~~~~c~c~g~g~g~~~c~~~ 306 (308)
T 3m7p_A 280 WEKYVHGVRYQCYCYGRGIGEWHCQPL 306 (308)
T ss_dssp EEEEETTEEEEEEEEETTBTEEEEEEC
T ss_pred ccccccceEEEeEecCCCccceeeccc
Confidence 9731 12235788844 77888876
No 23
>3ix0_A Beta-microseminoprotein; beta sheet, greek KEY motif, alternative splicing, disulfide bond, polymorphism, secreted, protein binding; 2.30A {Homo sapiens} PDB: 2iz3_A
Probab=91.56 E-value=0.25 Score=30.58 Aligned_cols=33 Identities=18% Similarity=0.554 Sum_probs=27.5
Q ss_pred cce-eCCEEecCCCeEeCCCCCCeeeEEcCCcEEEE
Q psy13556 61 ECE-HNGKVYNNGEKLNSTLTPCQVCYCRGGALMCT 95 (127)
Q Consensus 61 ~C~-~~g~~y~~g~~~~~~~~~C~~C~C~~g~~~C~ 95 (127)
.|. ++|+.|.-|++|+. +.|..|+|....+.|-
T Consensus 17 ~C~D~dG~~h~l~S~W~T--~~C~~C~C~~~Gi~CC 50 (94)
T 3ix0_A 17 KCMDLKGNKHPINSEWQT--DNCETCTCYETEISCC 50 (94)
T ss_dssp CEECTTSCEECTTCEEEC--TTSEEEEECSSEEEEE
T ss_pred cCCCCCCCEEeCCCEECC--CCCcEeEecCCCceec
Confidence 577 79999999999994 8999999977556553
No 24
>2cg7_A Fibronectin; signaling protein, 2F13F1, acute phase, alternative splicing, cell adhesion, glycoprotein, heparin-binding, phosphorylation; 1.2A {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 2cg6_A 2cku_A 2rkz_A 3cal_A 3zrz_A
Probab=91.26 E-value=0.26 Score=30.20 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=24.7
Q ss_pred eeeCCEEecCCCEecCC-C-C--ceeeEEc---CCcEeeecc
Q psy13556 3 DERGGGVFRSGELVPRF-G-P--CEECRCT---DGTVVCSMM 37 (127)
Q Consensus 3 ~~~~G~~y~~g~~~~~~-~-~--C~~C~C~---~g~v~C~~~ 37 (127)
+..+|+.|+.|++|... + . =..|+|+ .|.+.|.++
T Consensus 49 C~~~g~~Y~IGetW~k~~~~~~~~~~CtClGngkGew~C~p~ 90 (90)
T 2cg7_A 49 CHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPI 90 (90)
T ss_dssp EEETTEEEETTCEEEEECTTSSSEEEEEEEETTTTEEEEEEC
T ss_pred eeeCCcEEecCceEeeccccCCceEEEEEeCCCcccEEeeeC
Confidence 45689999999999532 2 1 3488886 355999763
No 25
>2rl0_A Fibronectin; 4F15F1, beta zipper, staphylococcus aureus, acute phase, alternative splicing, cell adhesion, extracellular matrix; 2.00A {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 1fbr_A 2rky_A
Probab=86.24 E-value=0.85 Score=27.84 Aligned_cols=36 Identities=28% Similarity=0.574 Sum_probs=23.6
Q ss_pred CeeeeCCEEecCCCEecCC---CCceeeEEc---CCcEeeec
Q psy13556 1 CIDERGGGVFRSGELVPRF---GPCEECRCT---DGTVVCSM 36 (127)
Q Consensus 1 ~~~~~~G~~y~~g~~~~~~---~~C~~C~C~---~g~v~C~~ 36 (127)
|.|...|+.|+.|++|... ..=..|+|+ .|.+.|.+
T Consensus 48 C~D~~tG~~Y~iGetW~k~~~~G~~~~C~C~GngrGew~Ce~ 89 (89)
T 2rl0_A 48 CNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCER 89 (89)
T ss_dssp EEETTTTEEEETTCEEEEECSSSCEEEEEEEETTTTEEEEEC
T ss_pred ccccCCceEEEcCceeecCccCCcEEEEEEeCCCceeEEecC
Confidence 3455569999999999522 122477785 35688763
No 26
>2ec3_A Fibronectin; complement module, two disulfide bonds, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.32 E-value=0.82 Score=26.36 Aligned_cols=37 Identities=30% Similarity=0.559 Sum_probs=27.8
Q ss_pred cceeCCEEecCCCeEeCCCCC--CeeeEEc---CCcEEEEec
Q psy13556 61 ECEHNGKVYNNGEKLNSTLTP--CQVCYCR---GGALMCTHF 97 (127)
Q Consensus 61 ~C~~~g~~y~~g~~~~~~~~~--C~~C~C~---~g~~~C~~~ 97 (127)
.|..+|+.|+-|++|.-..+. =..|+|. +|.|.|...
T Consensus 19 ~C~d~G~~YrIGe~W~r~~e~G~mm~CtClGnGrGe~~C~~~ 60 (68)
T 2ec3_A 19 WCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPH 60 (68)
T ss_dssp CBCSSSCCBCTTCEEEEECSSSSEEEEEEEETTTTEEEEEEC
T ss_pred ceecCCeeEEcCceEeecccCCCEEEEEEecCCcccEEeeCc
Confidence 578899999999999632122 3679995 378999876
No 27
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=41.52 E-value=4.3 Score=24.15 Aligned_cols=23 Identities=22% Similarity=0.621 Sum_probs=19.6
Q ss_pred CCCcccccCccceeCCEEecCCCe
Q psy13556 51 PNQCCPEFKCECEHNGKVYNNGEK 74 (127)
Q Consensus 51 ~g~CCp~c~~~C~~~g~~y~~g~~ 74 (127)
.|.|.+.-.+.|.+++++| +|++
T Consensus 61 ~g~CV~~~~Cpc~~~~~~y-pg~~ 83 (84)
T 2h9e_C 61 DDKCVSAEDCELDNMDFIY-PGTR 83 (84)
T ss_dssp TCCEECHHHHGGGGEEEEC-SCCC
T ss_pred CCCEECHHHCCCCcCCeEC-CCCC
Confidence 5899998777899999999 8874
No 28
>3m7p_A FN1 protein; fibronectin, extracellular matrix, modular protein, zinc BIN dimer, conformational change, cell adhesion; HET: NAG 12P; 2.50A {Homo sapiens} PDB: 3mql_A* 1e88_A* 1e8b_A* 1qo6_A 2fn2_A*
Probab=31.61 E-value=29 Score=25.76 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=26.2
Q ss_pred eCCEEecCCCEecC--CCCceeeEEcCCcEeeecc
Q psy13556 5 RGGGVFRSGELVPR--FGPCEECRCTDGTVVCSMM 37 (127)
Q Consensus 5 ~~G~~y~~g~~~~~--~~~C~~C~C~~g~v~C~~~ 37 (127)
-.|+.|..|..|.. .+.=.+|+|+.+.|.|...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 49 (308)
T 3m7p_A 15 DSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQET 49 (308)
T ss_dssp TTSCEEETTCEEEEEETTEEEEEEEETTEEEEEEC
T ss_pred cCCeeeecchhhHhhcCcceeeeeecCCCccccCc
Confidence 47999999999942 3445699999998988873
No 29
>2j5h_A Teratocarcinoma-derived growth factor; hormone/growth factor, EGF-CFC family, cripto, tumour progression, cysteine-rich domains; NMR {Mus musculus} SCOP: g.3.11.7
Probab=30.48 E-value=12 Score=19.33 Aligned_cols=22 Identities=27% Similarity=0.519 Sum_probs=17.9
Q ss_pred EecCCCCceeeEEcCCcEeeecc
Q psy13556 15 LVPRFGPCEECRCTDGTVVCSMM 37 (127)
Q Consensus 15 ~~~~~~~C~~C~C~~g~v~C~~~ 37 (127)
.|. ...|..|+|..|.+.|.+.
T Consensus 12 ~W~-~k~C~LCRC~~G~LhCfp~ 33 (41)
T 2j5h_A 12 TWL-PKKCSLCRCWHGQLHCLPQ 33 (41)
T ss_dssp TCS-SCCCCCCCCCSSSCCSCCS
T ss_pred Cee-ecCceEEEeecCceEEccc
Confidence 465 4789999999999888764
No 30
>3g1j_A Integron cassette protein; novel, oyster POND, woodshole, USA, structural genomics, unknown function PSI-2, protein structure initiative; 1.70A {Vibrio cholerae}
Probab=22.61 E-value=41 Score=20.45 Aligned_cols=14 Identities=7% Similarity=0.256 Sum_probs=12.5
Q ss_pred eeCCEEecCCCEec
Q psy13556 4 ERGGGVFRSGELVP 17 (127)
Q Consensus 4 ~~~G~~y~~g~~~~ 17 (127)
.|+|..|+.||+|.
T Consensus 28 Dy~Gft~~~GE~w~ 41 (93)
T 3g1j_A 28 DYRNINYERGDVMR 41 (93)
T ss_dssp CTTCCEECTTCEEE
T ss_pred ccCCcEeCCCCEEE
Confidence 48999999999996
Done!