RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13557
         (170 letters)



>d1j7na1 d.92.1.14 (A:27-263) Anthrax toxin lethal factor, N- and
           C-terminal domains {Bacillus anthracis [TaxId: 1392]}
          Length = 237

 Score = 24.9 bits (54), Expect = 6.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 77  LAYHIYLMLHNRTTLDAYRAPQFNY 101
            A+  Y+   +R  L  Y    FNY
Sbjct: 193 KAFAYYIEPQHRDVLQLYAPEAFNY 217


>d1j5xa_ c.80.1.1 (A:) Hypothetical protein TM0813 {Thermotoga
           maritima [TaxId: 2336]}
          Length = 329

 Score = 24.2 bits (51), Expect = 9.5
 Identities = 6/22 (27%), Positives = 9/22 (40%)

Query: 64  LLAASLTTVKLALLAYHIYLML 85
             +A L TV   +L Y   +  
Sbjct: 292 WKSAFLRTVPAQILGYQKAISR 313


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.329    0.144    0.476 

Gapped
Lambda     K      H
   0.267   0.0654    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 667,206
Number of extensions: 28043
Number of successful extensions: 59
Number of sequences better than 10.0: 1
Number of HSP's gapped: 59
Number of HSP's successfully gapped: 8
Length of query: 170
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 91
Effective length of database: 1,322,926
Effective search space: 120386266
Effective search space used: 120386266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 50 (23.2 bits)