BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13560
(629 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5U379|SNF5_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1-A OS=Danio rerio
GN=smarcb1a PE=2 SV=1
Length = 373
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/369 (69%), Positives = 297/369 (80%), Gaps = 12/369 (3%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+TYG KPI FQ+EE+GDFY IGSEVGNYLRMFRGSLYK+YP L RR + EERK+++ ++
Sbjct: 5 KTYGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLSRRLATVEERKKIVASS 64
Query: 64 GINSHC-LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLP 121
+ + LA+SVTLLK SEVE+I +G+DEKYKAVSI TEP RE K K+ W P+LP
Sbjct: 65 HDHGYTTLATSVTLLKASEVEEIFDGHDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLP 124
Query: 122 NSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIE 180
NSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLVPIRLDMEI+
Sbjct: 125 NSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQQEVLVPIRLDMEID 184
Query: 181 GQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA 240
GQKLRD FTWN N E L+TPE FAE+LCDDLDL+PL FVPAIA +IRQQ ++
Sbjct: 185 GQKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIES 235
Query: 241 FPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF 300
+P +++LDE DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELGLGGEF
Sbjct: 236 YPTDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF 295
Query: 301 VTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRD 360
VT IAYSIRGQLSWHQRTYAFSE PLP VE R+ ++DQW P LETLTDAEMEKKIRD
Sbjct: 296 VTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD 355
Query: 361 QDRNTRESK 369
QDRNTR +
Sbjct: 356 QDRNTRRMR 364
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/265 (74%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 109 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 168
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE FAE+LCDDLDL+PL FVPAIA +
Sbjct: 169 SQQEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASA 228
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++LDE DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 229 IRQQIESYPTDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 288
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQRTYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 289 LGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 348
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 349 MEKKIRDQDRNTRRMRRLANTAPAW 373
>sp|Q6DFM1|SNF5_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Xenopus tropicalis
GN=smarcb1 PE=2 SV=1
Length = 378
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/372 (67%), Positives = 300/372 (80%), Gaps = 15/372 (4%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+EE+G++Y IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 7 KTFGQKPVKFQLEEDGEYYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 66
Query: 64 -GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAP 118
G H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+ W P
Sbjct: 67 HGKKYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQWVP 126
Query: 119 SLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDM 177
+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA+ +EVLVPIRLDM
Sbjct: 127 TLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQSEVLVPIRLDM 186
Query: 178 EIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQ 237
EI+GQKLRD FTWN N E L+TPE FAE+LCDDLDLNPL FVPAIA +IRQQ
Sbjct: 187 EIDGQKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQ 237
Query: 238 TDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLG 297
+++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELGLG
Sbjct: 238 IESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLG 297
Query: 298 GEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKK 357
GEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAEMEKK
Sbjct: 298 GEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKK 357
Query: 358 IRDQDRNTRESK 369
IRDQDRNTR +
Sbjct: 358 IRDQDRNTRRMR 369
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 223/265 (84%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 114 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 173
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
+ +EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE FAE+LCDDLDLNPL FVPAIA +
Sbjct: 174 AQSEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASA 233
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 234 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 293
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 294 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 353
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 354 MEKKIRDQDRNTRRMRRLANTAPAW 378
>sp|Q6GQ82|SNF5_XENLA SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Xenopus laevis
GN=smarcb1 PE=2 SV=1
Length = 378
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/372 (68%), Positives = 299/372 (80%), Gaps = 15/372 (4%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+EE+GD+Y IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 7 KTFGQKPVKFQLEEDGDYYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 66
Query: 64 -GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAP 118
G H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+ W P
Sbjct: 67 HGKKYHGHTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQWVP 126
Query: 119 SLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDM 177
+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA+ EVLVPIRLDM
Sbjct: 127 TLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQPEVLVPIRLDM 186
Query: 178 EIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQ 237
EI+GQKLRD FTWN N E L+TPE FAE+LCDDLDLNPL FVPAIA +IRQQ
Sbjct: 187 EIDGQKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQ 237
Query: 238 TDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLG 297
+++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELGLG
Sbjct: 238 IESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLG 297
Query: 298 GEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKK 357
GEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAEMEKK
Sbjct: 298 GEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKK 357
Query: 358 IRDQDRNTRESK 369
IRDQDRNTR +
Sbjct: 358 IRDQDRNTRRMR 369
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 114 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 173
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
+ EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE FAE+LCDDLDLNPL FVPAIA +
Sbjct: 174 AQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASA 233
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 234 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 293
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 294 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 353
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 354 MEKKIRDQDRNTRRMRRLANTAPAW 378
>sp|Q5ZK40|SNF5_CHICK SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Gallus gallus
GN=SMARCB1 PE=2 SV=1
Length = 386
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/379 (67%), Positives = 300/379 (79%), Gaps = 22/379 (5%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+EE+G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 GIN--SHC---------LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTK 111
N SH LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K
Sbjct: 68 HENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAK 127
Query: 112 KAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVL 170
+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVL
Sbjct: 128 RNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVL 187
Query: 171 VPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAI 230
VPIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAI
Sbjct: 188 VPIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAI 238
Query: 231 AQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRL 290
A +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++L
Sbjct: 239 ASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKL 298
Query: 291 CTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLT 350
C+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLT
Sbjct: 299 CSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLT 358
Query: 351 DAEMEKKIRDQDRNTRESK 369
DAEMEKKIRDQDRNTR +
Sbjct: 359 DAEMEKKIRDQDRNTRRMR 377
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 122 REQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 181
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 182 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 241
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 242 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 301
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 302 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 361
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 362 MEKKIRDQDRNTRRMRRLANTAPAW 386
>sp|Q9Z0H3|SNF5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Mus musculus
GN=Smarcb1 PE=1 SV=1
Length = 385
Score = 513 bits (1321), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/375 (66%), Positives = 296/375 (78%), Gaps = 21/375 (5%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLL--- 60
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 61 -------DTAGINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
+T LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTR 366
AEMEKKIRDQDRNTR
Sbjct: 359 AEMEKKIRDQDRNTR 373
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>sp|Q12824|SNF5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Homo sapiens
GN=SMARCB1 PE=1 SV=2
Length = 385
Score = 513 bits (1321), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/375 (66%), Positives = 296/375 (78%), Gaps = 21/375 (5%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLL--- 60
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 61 -------DTAGINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
+T LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTR 366
AEMEKKIRDQDRNTR
Sbjct: 359 AEMEKKIRDQDRNTR 373
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>sp|Q5BIN2|SNF5_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Bos taurus GN=SMARCB1
PE=2 SV=1
Length = 385
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/375 (66%), Positives = 297/375 (79%), Gaps = 21/375 (5%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNAKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTR 366
AEMEKKIRDQDRNTR
Sbjct: 359 AEMEKKIRDQDRNTR 373
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 222/265 (83%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRRMRRLANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>sp|O42467|SNF5_TETFL SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily B member 1 OS=Tetraodon fluviatilis
GN=smarcb1 PE=3 SV=1
Length = 373
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/366 (68%), Positives = 293/366 (80%), Gaps = 12/366 (3%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+ +G KP+ FQ+E+ GDFY IGSEVGNYLRMFRGSLYK+YP L+R+ S EERK++++++
Sbjct: 5 KAFGQKPVKFQLEDGGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKIVESS 64
Query: 64 GINSHC-LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLP 121
+ + LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+ W P+LP
Sbjct: 65 HDHGYTQLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLP 124
Query: 122 NSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIE 180
NSSH LDAVP +T +NR+R+ + K RTFPLCFDD DP+ I ENAS +EVLVPIRLDMEIE
Sbjct: 125 NSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENASQSEVLVPIRLDMEIE 184
Query: 181 GQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA 240
GQKLRD FTWN N E L+TPE FAE+LCDDLDLNPL FVPAI +IRQQ ++
Sbjct: 185 GQKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIRQQIES 235
Query: 241 FPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF 300
+P + +L+E DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELG GGEF
Sbjct: 236 YPTDAILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGQGGEF 295
Query: 301 VTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRD 360
VT IAYSIRGQLSWHQ+ YAFSE PLP VE R+ +DQW P LETLTDAEMEKKIRD
Sbjct: 296 VTTIAYSIRGQLSWHQKAYAFSENPLPTVEIAIRNTGAADQWCPLLETLTDAEMEKKIRD 355
Query: 361 QDRNTR 366
QDRNTR
Sbjct: 356 QDRNTR 361
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/265 (72%), Positives = 219/265 (82%), Gaps = 1/265 (0%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NR+R+ + K RTFPLCFDD DP+ I ENA
Sbjct: 109 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENA 168
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S +EVLVPIRLDMEIEGQKLRD FTWN NE L+TPE FAE+LCDDLDLNPL FVPAI +
Sbjct: 169 SQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSA 228
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P + +L+E DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 229 IRQQIESYPTDAILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 288
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LG GGEFVT IAYSIRGQLSWHQ+ YAFSE PLP VE R+ +DQW P LETLTDAE
Sbjct: 289 LGQGGEFVTTIAYSIRGQLSWHQKAYAFSENPLPTVEIAIRNTGAADQWCPLLETLTDAE 348
Query: 605 MEKKIRDQDRNTRRMRRLANTTTGW 629
MEKKIRDQDRNTRR+RRLANT GW
Sbjct: 349 MEKKIRDQDRNTRRIRRLANTAPGW 373
>sp|Q09699|SNF5_SCHPO SWI/SNF chromatin-remodeling complex subunit snf5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf5 PE=1 SV=1
Length = 632
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 53/237 (22%)
Query: 430 LVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLD--LNPLLFVPAIAQSIRQ 487
LVPIRL+++ + KLRD+FTWN + I+ +QFAE +C D D L+ + V I++SI+
Sbjct: 141 LVPIRLEIDADRYKLRDSFTWNLYDKCISLDQFAEQICIDYDIPLHNVHIVQNISKSIQA 200
Query: 488 QTDAF---------------------------PAENLLDEV--------HDQRVVIKLNI 512
Q + + P+++L +D R++IKL+I
Sbjct: 201 QINDYEPRKAQSNLSFVSDVSSSTSETVYAHEPSDSLAKASKQQIPTVQNDLRILIKLDI 260
Query: 513 HVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQR---- 568
+G +L+DQ EW++ E+SAE+FA +C +LGL GEF TA+A+SIR Q + +
Sbjct: 261 TIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCTAVAHSIREQCQMYIKYLSL 320
Query: 569 -TYAFSEAP----------LPVVEAPFR-SHSESDQWSPFLETLTDAEMEKKIRDQD 613
Y F + LP ++ R S ES ++P + L DAEME++ R D
Sbjct: 321 IGYLFDGSEIEDEEVRSYILPPLKNTLRFSDMESSSFAPMIYELNDAEMERQDRGYD 377
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 62/246 (25%)
Query: 170 LVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLD--LNPLLFV 227
LVPIRL+++ + KLRD+FTWN ++ C I+ +QFAE +C D D L+ + V
Sbjct: 141 LVPIRLEIDADRYKLRDSFTWN----LYDKC-----ISLDQFAEQICIDYDIPLHNVHIV 191
Query: 228 PAIAQSIRQQTDAF---------------------------PAENLLDEV--------HD 252
I++SI+ Q + + P+++L +D
Sbjct: 192 QNISKSIQAQINDYEPRKAQSNLSFVSDVSSSTSETVYAHEPSDSLAKASKQQIPTVQND 251
Query: 253 QRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQL 312
R++IKL+I +G +L+DQ EW++ E+SAE+FA +C +LGL GEF TA+A+SIR Q
Sbjct: 252 LRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCTAVAHSIREQC 311
Query: 313 SWHQR-----TYAFSEAP----------LPVVEAPFR-SHSESDQWSPFLETLTDAEMEK 356
+ + Y F + LP ++ R S ES ++P + L DAEME+
Sbjct: 312 QMYIKYLSLIGYLFDGSEIEDEEVRSYILPPLKNTLRFSDMESSSFAPMIYELNDAEMER 371
Query: 357 KIRDQD 362
+ R D
Sbjct: 372 QDRGYD 377
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 428 EVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQ 487
++ + I+LD+ I L D F WN + E+FA V+C DL L+ F A+A SIR+
Sbjct: 251 DLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSG-EFCTAVAHSIRE 309
Query: 488 QTDAF 492
Q +
Sbjct: 310 QCQMY 314
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 168 EVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFV 227
++ + I+LD+ I L D F WN +F+ S + E+FA V+C DL L+ F
Sbjct: 251 DLRILIKLDITIGRLNLIDQFEWN----LFAPES-----SAEEFATVMCLDLGLSG-EFC 300
Query: 228 PAIAQSIRQQTDAF 241
A+A SIR+Q +
Sbjct: 301 TAVAHSIREQCQMY 314
>sp|P18480|SNF5_YEAST SWI/SNF chromatin-remodeling complex subunit SNF5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNF5 PE=1
SV=3
Length = 905
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 39/247 (15%)
Query: 389 VPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQK--LRD 446
+PQ NR + K++ + ++T +E LVPIRL+ + + + LRD
Sbjct: 427 IPQVEVGNRKHYLEDKLKVYKQAMNET-----------SEQLVPIRLEFDQDRDRFFLRD 475
Query: 447 TFTWNKNETLITPEQFAEVLCDDL---DLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHD 503
T WNKN+ LI E F + + D D + I QSI++Q F ++ D
Sbjct: 476 TLLWNKNDKLIKIEDFVDDMLRDYRFEDATREQHIDTICQSIQEQIQEFQGNPYIELNQD 535
Query: 504 Q------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAY 557
+ R+ IKL+I VG L+DQ EWD+S +N E+FA +C EL L GEFVTAIA+
Sbjct: 536 RLGGDDLRIRIKLDIVVGQNQLIDQFEWDISNSDNCPEEFAESMCQELELPGEFVTAIAH 595
Query: 558 SIRGQLSWHQRT-----YAFSEA------------PLPVVEAPFRSHSESDQWSPFLETL 600
SIR Q+ + ++ Y F + P ++ +R +ES ++P L +
Sbjct: 596 SIREQVHMYHKSLALLGYNFDGSAIEDDDIRSRMLPTITLDDVYRPAAESKIFTPNLLQI 655
Query: 601 TDAEMEK 607
+ AE+E+
Sbjct: 656 SAAELER 662
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 48/256 (18%)
Query: 129 VPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQK--LRD 186
+PQ NR + K++ + ++T +E LVPIRL+ + + + LRD
Sbjct: 427 IPQVEVGNRKHYLEDKLKVYKQAMNET-----------SEQLVPIRLEFDQDRDRFFLRD 475
Query: 187 TFTWNKNGTVFSFCSLETLITPEQFAEVLCDDL---DLNPLLFVPAIAQSIRQQTDAFPA 243
T WNKN + LI E F + + D D + I QSI++Q F
Sbjct: 476 TLLWNKN---------DKLIKIEDFVDDMLRDYRFEDATREQHIDTICQSIQEQIQEFQG 526
Query: 244 ENLLDEVHDQ------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLG 297
++ D+ R+ IKL+I VG L+DQ EWD+S +N E+FA +C EL L
Sbjct: 527 NPYIELNQDRLGGDDLRIRIKLDIVVGQNQLIDQFEWDISNSDNCPEEFAESMCQELELP 586
Query: 298 GEFVTAIAYSIRGQLSWHQRT-----YAFSEA------------PLPVVEAPFRSHSESD 340
GEFVTAIA+SIR Q+ + ++ Y F + P ++ +R +ES
Sbjct: 587 GEFVTAIAHSIREQVHMYHKSLALLGYNFDGSAIEDDDIRSRMLPTITLDDVYRPAAESK 646
Query: 341 QWSPFLETLTDAEMEK 356
++P L ++ AE+E+
Sbjct: 647 IFTPNLLQISAAELER 662
>sp|Q6C9N2|SFH1_YARLI Chromatin structure-remodeling complex subunit SFH1 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=SFH1 PE=3 SV=1
Length = 441
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 119/217 (54%), Gaps = 13/217 (5%)
Query: 417 PSCIFENASHTE--VLVPIRLDME-IEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLN 473
P + E S + L+PIR+ +E I+ +++D F W+ +E ++TPEQFA + C DLD+
Sbjct: 190 PQEVLEELSQVKEPTLIPIRVAVENIDVFRVQDFFLWDADEKILTPEQFATLTCADLDV- 248
Query: 474 PLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENS 533
P+ + ++ I++Q + A L + + V+++L + V D+ EWD+S + +
Sbjct: 249 PIGYSAQMSAQIKKQLAEYTAAPALPKDVEVHVIVELAVTVDKIVYEDKFEWDLSGEYAT 308
Query: 534 AEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPV-------VEAPFRS 586
++FA + +LGLG EF AI Y + L Q+ + PL V +EA R
Sbjct: 309 PQEFARTVVQDLGLGQEFYPAITYQLYETLGKLQKAWLERSIPLDVDNRAAFGLEAGLRV 368
Query: 587 HSE--SDQWSPFLETLTDAEMEKKIRDQDRNTRRMRR 621
+ + W P +E +T EM+K+ ++DR++RR++R
Sbjct: 369 DQDNLGESWVPRVEEMTPEEMQKREMERDRSSRRLKR 405
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 22/229 (9%)
Query: 157 PSCIFENASHTE--VLVPIRLDME-IEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAE 213
P + E S + L+PIR+ +E I+ +++D F W+ + E ++TPEQFA
Sbjct: 190 PQEVLEELSQVKEPTLIPIRVAVENIDVFRVQDFFLWDAD---------EKILTPEQFAT 240
Query: 214 VLCDDLDLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIE 273
+ C DLD+ P+ + ++ I++Q + A L + + V+++L + V D+ E
Sbjct: 241 LTCADLDV-PIGYSAQMSAQIKKQLAEYTAAPALPKDVEVHVIVELAVTVDKIVYEDKFE 299
Query: 274 WDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPV----- 328
WD+S + + ++FA + +LGLG EF AI Y + L Q+ + PL V
Sbjct: 300 WDLSGEYATPQEFARTVVQDLGLGQEFYPAITYQLYETLGKLQKAWLERSIPLDVDNRAA 359
Query: 329 --VEAPFRSHSE--SDQWSPFLETLTDAEMEKKIRDQDRNTRESKTKKA 373
+EA R + + W P +E +T EM+K+ ++DR++R K + A
Sbjct: 360 FGLEAGLRVDQDNLGESWVPRVEEMTPEEMQKREMERDRSSRRLKRESA 408
>sp|Q9USM3|SFH1_SCHPO Chromatin structure-remodeling complex subunit sfh1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sfh1 PE=1 SV=1
Length = 418
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 12/217 (5%)
Query: 424 ASHTEVLVPIRLDMEI-EGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIA 482
A +V +PIRLD+E+ +L+DTF WN NE ++TP+ FA++LC DLDL+ ++ I+
Sbjct: 111 AEERDVYIPIRLDIELPNNYRLKDTFLWNMNEQVMTPDVFAQILCADLDLSTNVYGTQIS 170
Query: 483 QSIRQQTDAFP--AENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVR 540
SIR Q + + AE + + + VV + + + S DQ+EW+++ + E+F+V
Sbjct: 171 SSIRAQIEEYAPVAEVPMPKGQEMLVVFNIQVQLAQLSYNDQVEWNLTSPL-TPEEFSVL 229
Query: 541 LCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAP------LPVVEAPFRSHSES--DQ 592
C +LGL GE IAY+I L ++ + P +P +A R ++
Sbjct: 230 TCNDLGLSGESRPEIAYAIHECLLKLKKNACEGDLPDYDSDAVPGTKAGPRQDMDTLGAL 289
Query: 593 WSPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTTGW 629
W P LET++ + +K +++ ++ RR A+ G+
Sbjct: 290 WQPVLETVSLEDAKKNENNRENLVKQWRREASKFGGF 326
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 164 ASHTEVLVPIRLDMEI-EGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLN 222
A +V +PIRLD+E+ +L+DTF WN N E ++TP+ FA++LC DLDL+
Sbjct: 111 AEERDVYIPIRLDIELPNNYRLKDTFLWNMN---------EQVMTPDVFAQILCADLDLS 161
Query: 223 PLLFVPAIAQSIRQQTDAFP--AENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKE 280
++ I+ SIR Q + + AE + + + VV + + + S DQ+EW+++
Sbjct: 162 TNVYGTQISSSIRAQIEEYAPVAEVPMPKGQEMLVVFNIQVQLAQLSYNDQVEWNLTSPL 221
Query: 281 NSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAP------LPVVEAPFR 334
+ E+F+V C +LGL GE IAY+I L ++ + P +P +A R
Sbjct: 222 -TPEEFSVLTCNDLGLSGESRPEIAYAIHECLLKLKKNACEGDLPDYDSDAVPGTKAGPR 280
Query: 335 SHSES--DQWSPFLETLTDAEMEKKIRDQDRNTRESKTKK 372
++ W P LET++ + +K + N RE+ K+
Sbjct: 281 QDMDTLGALWQPVLETVSLEDAKK-----NENNRENLVKQ 315
>sp|Q06168|SFH1_YEAST Chromatin structure-remodeling complex subunit SFH1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SFH1 PE=1 SV=1
Length = 426
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 400 VNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITP 459
+N K V + L +TD S +++PI LD+E G ++D F WN N+ I+P
Sbjct: 176 INGKVVSPYRL---NTDQETKANANSGEAIMIPITLDIEHMGHTIKDQFLWNYNDDSISP 232
Query: 460 EQFAEVLCDDLDLNPLLFVPAIAQSIRQQ---TDAFPAENLLDEVHDQRVVIKLNIHVGN 516
E+FA + C DLD+ IA I++Q + A ++ ++H V+I L ++ +
Sbjct: 233 EEFASIYCKDLDMTSATLQTQIANIIKEQLKDLENIAATEIMSDLH---VIINLTCNLQD 289
Query: 517 TSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAP 576
D +W++++K + E+FA + +LGL EF+ I+ S+ + ++ +
Sbjct: 290 RFFEDNFQWNLNDKSLTPERFATSIVQDLGLTREFIPLISQSLHETILKIKKDWVDGHLI 349
Query: 577 LPVV--EAPFRSHSE--------SDQWSPFLETLTDAEMEKKIRDQDRNTRRMRR 621
V +A F S W P +E LT E++K+ +++RN RR++R
Sbjct: 350 QDHVPNDAAFGYLSGIRLDIDELGSNWCPRVEILTKEEIQKREIEKERNLRRLKR 404
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 28/243 (11%)
Query: 140 VNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSF 199
+N K V + L +TD S +++PI LD+E G ++D F WN N
Sbjct: 176 INGKVVSPYRL---NTDQETKANANSGEAIMIPITLDIEHMGHTIKDQFLWNYN------ 226
Query: 200 CSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQ---TDAFPAENLLDEVHDQRVV 256
+ I+PE+FA + C DLD+ IA I++Q + A ++ ++H V+
Sbjct: 227 ---DDSISPEEFASIYCKDLDMTSATLQTQIANIIKEQLKDLENIAATEIMSDLH---VI 280
Query: 257 IKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQ 316
I L ++ + D +W++++K + E+FA + +LGL EF+ I+ S+ + +
Sbjct: 281 INLTCNLQDRFFEDNFQWNLNDKSLTPERFATSIVQDLGLTREFIPLISQSLHETILKIK 340
Query: 317 RTYAFSEAPLPVV--EAPFRSHSE--------SDQWSPFLETLTDAEMEKKIRDQDRNTR 366
+ + V +A F S W P +E LT E++K+ +++RN R
Sbjct: 341 KDWVDGHLIQDHVPNDAAFGYLSGIRLDIDELGSNWCPRVEILTKEEIQKREIEKERNLR 400
Query: 367 ESK 369
K
Sbjct: 401 RLK 403
>sp|P93045|BSH_ARATH Chromatin structure-remodeling complex protein BSH OS=Arabidopsis
thaliana GN=BSH PE=1 SV=2
Length = 240
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 11/143 (7%)
Query: 427 TEVLVPIRLDMEIEGQKLRDTFTWN----KNETLITPEQFAEVLCDDLDLNPLLFVPAIA 482
E LVPIRLD++ EGQ+ +D FTWN NE +I FA+ DL L P FV IA
Sbjct: 20 AENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVI----FAKRTVKDLKL-PYAFVTQIA 74
Query: 483 QSIRQQTDAFPAENLLDEVHDQRVV-IKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRL 541
QSI+ Q F A D ++++ IKL++ V +T + DQ WD++ E+ E+FA L
Sbjct: 75 QSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTL 134
Query: 542 CTELGLGG-EFVTAIAYSIRGQL 563
C +LG+ E A+A++IR QL
Sbjct: 135 CKDLGVEDPEVGPAVAFAIREQL 157
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 84/148 (56%), Gaps = 12/148 (8%)
Query: 167 TEVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLF 226
E LVPIRLD++ EGQ+ +D FTWN S E +I FA+ DL L P F
Sbjct: 20 AENLVPIRLDIQFEGQRYKDAFTWNP-----SDPDNEVVI----FAKRTVKDLKL-PYAF 69
Query: 227 VPAIAQSIRQQTDAFPAENLLDEVHDQRVV-IKLNIHVGNTSLVDQIEWDMSEKENSAEK 285
V IAQSI+ Q F A D ++++ IKL++ V +T + DQ WD++ E+ E+
Sbjct: 70 VTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEE 129
Query: 286 FAVRLCTELGLGG-EFVTAIAYSIRGQL 312
FA LC +LG+ E A+A++IR QL
Sbjct: 130 FARTLCKDLGVEDPEVGPAVAFAIREQL 157
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 243 AENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVT 302
AENL V I+L+I D W+ S+ +N FA R +L L FVT
Sbjct: 20 AENL--------VPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVT 71
Query: 303 AIAYSIRGQLS 313
IA SI+ QLS
Sbjct: 72 QIAQSIQSQLS 82
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 494 AENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVT 553
AENL V I+L+I D W+ S+ +N FA R +L L FVT
Sbjct: 20 AENL--------VPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVT 71
Query: 554 AIAYSIRGQLS 564
IA SI+ QLS
Sbjct: 72 QIAQSIQSQLS 82
>sp|Q6FTV3|SFH1_CANGA Chromatin structure-remodeling complex subunit SFH1 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=SFH1 PE=3 SV=1
Length = 403
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 429 VLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDL-NPLLFVPAIAQSIRQ 487
+L+PI L++E + D F WN N+T I+ E F C+DL L + I SI +
Sbjct: 176 ILIPITLNVEHGNNTISDAFVWNVNDTSISVEDFVTTYCNDLGLYGNVSLHSQIVSSINE 235
Query: 488 QTDAFPAENLLDEV-HDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELG 546
Q EN+ V D VV+ L + D +W++S+K S EKFA+ + +LG
Sbjct: 236 QIQEL--ENVASLVIPDLEVVVNLTCTIQGKFFEDYFQWNLSDKSLSPEKFALIIVADLG 293
Query: 547 LGGEFVTAIAYSIRGQL----------SWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPF 596
L EF IA+S+ L S HQ T A + +W+P
Sbjct: 294 LAREFAPGIAHSLHEYLLHVKKEWAEGSLHQDTVPNEAAFGYLAGVRLNIDDLGAKWAPK 353
Query: 597 LETLTDAEMEKKIRDQDRNTRRMRR 621
+E LT E++K+ +++RN RR++R
Sbjct: 354 VEYLTQEEIQKREIEKERNMRRLKR 378
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 169 VLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDL-NPLLFV 227
+L+PI L++E + D F WN N +T I+ E F C+DL L +
Sbjct: 176 ILIPITLNVEHGNNTISDAFVWNVN---------DTSISVEDFVTTYCNDLGLYGNVSLH 226
Query: 228 PAIAQSIRQQTDAFPAENLLDEV-HDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKF 286
I SI +Q EN+ V D VV+ L + D +W++S+K S EKF
Sbjct: 227 SQIVSSINEQIQEL--ENVASLVIPDLEVVVNLTCTIQGKFFEDYFQWNLSDKSLSPEKF 284
Query: 287 AVRLCTELGLGGEFVTAIAYSIRGQL----------SWHQRTYAFSEAPLPVVEAPFRSH 336
A+ + +LGL EF IA+S+ L S HQ T A +
Sbjct: 285 ALIIVADLGLAREFAPGIAHSLHEYLLHVKKEWAEGSLHQDTVPNEAAFGYLAGVRLNID 344
Query: 337 SESDQWSPFLETLTDAEMEKKIRDQDRNTRESK 369
+W+P +E LT E++K+ +++RN R K
Sbjct: 345 DLGAKWAPKVEYLTQEEIQKREIEKERNMRRLK 377
>sp|Q6CSR7|SFH1_KLULA Chromatin structure-remodeling complex subunit SFH1
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SFH1 PE=3
SV=1
Length = 442
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 429 VLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVP------AIA 482
++VPIRL++E G KL D F WN N+ +TPEQFA +LC DLD P+L P I
Sbjct: 209 IMVPIRLNVEFSGHKLADFFMWNLNDHSMTPEQFATILCQDLDF-PVLSNPNNSPYTQII 267
Query: 483 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 542
I +Q + L +V D V+I L ++ + D EW++++ E+FA +
Sbjct: 268 SMINEQLQEYETLASL-QVPDLHVIINLTANLDSKLYDDTFEWNLNDDSLCPEQFAELVV 326
Query: 543 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVE--APFRSHSE--------SDQ 592
+LGL EFV AIA+S+ L ++ + L VE A F S
Sbjct: 327 QDLGLQREFVPAIAHSLHESLLKVKKDWLEGNLNLAHVENKAAFGYTSGIRLDIDTLGAS 386
Query: 593 WSPFLETLTDAEMEKKIRDQDRNTRRMRR 621
W P +E L+ E+EK+ +++RN RR++R
Sbjct: 387 WFPKVEVLSQWEIEKREIEKERNMRRLKR 415
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 169 VLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVP 228
++VPIRL++E G KL D F WN N + +TPEQFA +LC DLD P+L P
Sbjct: 209 IMVPIRLNVEFSGHKLADFFMWNLN---------DHSMTPEQFATILCQDLDF-PVLSNP 258
Query: 229 ------AIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENS 282
I I +Q + L +V D V+I L ++ + D EW++++
Sbjct: 259 NNSPYTQIISMINEQLQEYETLASL-QVPDLHVIINLTANLDSKLYDDTFEWNLNDDSLC 317
Query: 283 AEKFAVRLCTELGLGGEFVTAIAYSIRGQL 312
E+FA + +LGL EFV AIA+S+ L
Sbjct: 318 PEQFAELVVQDLGLQREFVPAIAHSLHESL 347
>sp|Q754R8|SFH1_ASHGO Chromatin structure-remodeling complex subunit SFH1 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=SFH1 PE=3 SV=1
Length = 383
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 424 ASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDL-NPLLFVPAIA 482
+S V++PIRL++E G K+ D FTWN N+ +T EQFA++ C DLD + L I
Sbjct: 149 SSSQPVVIPIRLNLEHNGHKIIDFFTWNLNDHSLTLEQFAQIYCQDLDFAHNLSLQNQIV 208
Query: 483 QSIRQQTDAFPAENLLD-EVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRL 541
+I Q + E L V D V+I L ++ + D EW+++++ S E+FA +
Sbjct: 209 AAINDQLQEY--ETLASVVVPDLHVIINLTCNLDSKLYEDNFEWNLNDQTLSPEQFAELV 266
Query: 542 CTELGLGGEFVTAIAYSI 559
+LGL EF+ AIA+++
Sbjct: 267 VQDLGLTREFMPAIAHAL 284
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 164 ASHTEVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDL-N 222
+S V++PIRL++E G K+ D FTWN N + +T EQFA++ C DLD +
Sbjct: 149 SSSQPVVIPIRLNLEHNGHKIIDFFTWNLN---------DHSLTLEQFAQIYCQDLDFAH 199
Query: 223 PLLFVPAIAQSIRQQTDAFPAENLLDEV-HDQRVVIKLNIHVGNTSLVDQIEWDMSEKEN 281
L I +I Q + E L V D V+I L ++ + D EW+++++
Sbjct: 200 NLSLQNQIVAAINDQLQEY--ETLASVVVPDLHVIINLTCNLDSKLYEDNFEWNLNDQTL 257
Query: 282 SAEKFAVRLCTELGLGGEFVTAIAYSI 308
S E+FA + +LGL EF+ AIA+++
Sbjct: 258 SPEQFAELVVQDLGLTREFMPAIAHAL 284
>sp|Q07782|S13A1_RAT Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1
PE=2 SV=1
Length = 595
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 241 FPAENLLDEVHDQRVVIKLNIH---VGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLG 297
FP ++ H K + H +G L IE K N ++ A+R+ +G+
Sbjct: 66 FPMFGIMSSTHVASAYFK-DFHLLLIGVICLATSIE-----KWNLHKRIALRMVMMVGVN 119
Query: 298 GEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFR------SHSESDQWSPFLETLTD 351
++T S LS + + +P+VEA + + +E+ Q + F E+
Sbjct: 120 PAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQITSAEAEAEATQMTYFNESAAQ 179
Query: 352 A-EMEKKIRDQDRNTRESKTKKAVPWAPSLPNSSHLDAVPQATPVNRNRVNQKKVRT 407
E+++ I Q+ N R+ KTK P+L +S+ V +N V K R+
Sbjct: 180 GLEVDETIIGQETNERKEKTK------PALGSSNDKGKVSSKMETEKNTVTGAKYRS 230
>sp|Q63ZP1|PHF10_XENLA PHD finger protein 10 OS=Xenopus laevis GN=phf10 PE=2 SV=2
Length = 506
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 EENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTAGINSHCLASSVT 75
+E G++Y + +V YL + S +KYP L RR +S++E+ L + I +T
Sbjct: 83 DETGEYYMLQEQVSEYLGVT--SFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLT 140
Query: 76 LLKVSEVEDIL 86
L+ EV D++
Sbjct: 141 ALRSDEVIDLM 151
>sp|Q8WUB8|PHF10_HUMAN PHD finger protein 10 OS=Homo sapiens GN=PHF10 PE=1 SV=3
Length = 498
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 EENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTAGINSHCLASSVT 75
+E G++Y + +V YL + S +KYP L RR +S++E+ L + I +T
Sbjct: 82 DETGEYYMLQEQVSEYLGVT--SFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLT 139
Query: 76 LLKVSEVEDIL 86
L+ EV D++
Sbjct: 140 ALRSDEVIDLM 150
>sp|Q9D8M7|PHF10_MOUSE PHD finger protein 10 OS=Mus musculus GN=Phf10 PE=1 SV=4
Length = 497
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 EENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTAGINSHCLASSVT 75
+E G++Y + +V YL + S +KYP L RR +S++E+ L + I +T
Sbjct: 81 DETGEYYMLQEQVSEYLGVT--SFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLT 138
Query: 76 LLKVSEVEDIL 86
L+ EV D++
Sbjct: 139 ALRSDEVIDLM 149
>sp|Q4V7A6|PHF10_RAT PHD finger protein 10 OS=Rattus norvegicus GN=Phf10 PE=2 SV=2
Length = 497
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 EENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTAGINSHCLASSVT 75
+E G++Y + +V YL + S +KYP L RR +S++E+ L + I +T
Sbjct: 81 DETGEYYMLQEQVSEYLGVT--SFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLT 138
Query: 76 LLKVSEVEDIL 86
L+ EV D++
Sbjct: 139 ALRSDEVIDLM 149
>sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein OS=Drosophila melanogaster
GN=e(y)3 PE=2 SV=3
Length = 2006
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 17 ENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTAGINSHCLASSVTL 76
+N D + I +V YL + S +KYP L RR++ EER L + ++ +T
Sbjct: 1334 KNRDTFMIQEQVALYLGIT--SFKRKYPDLPRRSVDMEERNWLQEKGLVSEKLCDLGITA 1391
Query: 77 LKVSEVEDIL 86
+ S++ DI+
Sbjct: 1392 VWASDILDIM 1401
>sp|A9BED0|SYP_PROM4 Proline--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=proS PE=3 SV=1
Length = 600
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 419 CIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFV 478
I EN VL+ IR D E+ KL + + N+ LI + E DDLD L+ +
Sbjct: 287 AILENGREQPVLISIRGDQELNETKLSNEISKFLNKNLIALKSITE---DDLDRQGLINI 343
Query: 479 P 479
P
Sbjct: 344 P 344
>sp|Q8CDT7|CJ107_MOUSE Uncharacterized protein C10orf107 homolog OS=Mus musculus PE=2 SV=2
Length = 208
Score = 32.7 bits (73), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 33/135 (24%)
Query: 260 NIHVGNTSLVDQIEW---DMSE----KENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQL 312
N+ + SL D I+W M+E +E F V E AI ++ L
Sbjct: 21 NLQTLHMSLEDSIKWLGEVMAEIGPNHSQKSEDFHVFEVKE-------ANAIIDYLKISL 73
Query: 313 SWHQRTYAF------------SEAPLPVVE-------APFRSHSESDQWSPFLETLTDAE 353
H R Y F +E + VV+ AP D +S F+E L +
Sbjct: 74 FQHYRLYEFLFYSTREEIVIGTEQTIEVVKPADYPFPAPLEEGISLDTYSTFIEPLPTPD 133
Query: 354 MEKKIRDQDRNTRES 368
ME+K+ DQ++ T+E+
Sbjct: 134 MEQKVLDQEQGTQEA 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,876,087
Number of Sequences: 539616
Number of extensions: 10397944
Number of successful extensions: 25002
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 24807
Number of HSP's gapped (non-prelim): 70
length of query: 629
length of database: 191,569,459
effective HSP length: 124
effective length of query: 505
effective length of database: 124,657,075
effective search space: 62951822875
effective search space used: 62951822875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)