Your job contains 1 sequence.
>psy13560
MSVRTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLL
DTAGINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEPLVPRESKTKKAVPWAPSL
PNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIE
GQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA
FPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF
VTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRD
QDRNTRESKTKKAVPWAPSLPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCI
FENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPA
IAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVR
LCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETL
TDAEMEKKIRDQDRNTRRMRRLANTTTGW
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13560
(629 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011715 - symbol:Snr1 "Snf5-related 1" species:722... 1390 3.7e-142 1
ZFIN|ZDB-GENE-041114-5 - symbol:smarcb1a "SWI/SNF related... 1305 3.8e-133 1
RGD|1308761 - symbol:Smarcb1 "SWI/SNF related, matrix ass... 1298 2.1e-132 1
UNIPROTKB|Q5ZK40 - symbol:SMARCB1 "SWI/SNF-related matrix... 1288 2.4e-131 1
ZFIN|ZDB-GENE-991008-16 - symbol:smarcb1b "SWI/SNF relate... 1286 3.9e-131 1
UNIPROTKB|Q5BIN2 - symbol:SMARCB1 "SWI/SNF-related matrix... 1282 1.0e-130 1
UNIPROTKB|E2RMD3 - symbol:SMARCB1 "Uncharacterized protei... 1282 1.0e-130 1
UNIPROTKB|Q12824 - symbol:SMARCB1 "SWI/SNF-related matrix... 1282 1.0e-130 1
UNIPROTKB|F2Z4X9 - symbol:SMARCB1 "Uncharacterized protei... 1282 1.0e-130 1
MGI|MGI:1328366 - symbol:Smarcb1 "SWI/SNF related, matrix... 1282 1.0e-130 1
UNIPROTKB|G3V935 - symbol:Smarcb1 "SWI/SNF related, matri... 1282 1.0e-130 1
UNIPROTKB|G5E975 - symbol:SMARCB1 "SWI/SNF related, matri... 1248 4.2e-127 1
UNIPROTKB|B5MCL5 - symbol:SMARCB1 "SWI/SNF-related matrix... 821 2.9e-114 2
WB|WBGene00011111 - symbol:snfc-5 species:6239 "Caenorhab... 882 2.5e-88 1
UNIPROTKB|Q21831 - symbol:snfc-5 "Protein SNFC-5" species... 882 2.5e-88 1
UNIPROTKB|C9JTA6 - symbol:SMARCB1 "SWI/SNF-related matrix... 455 1.3e-59 2
ASPGD|ASPL0000069514 - symbol:AN7297 species:162425 "Emer... 325 5.1e-26 1
CGD|CAL0001815 - symbol:orf19.5093 species:5476 "Candida ... 260 1.6e-21 1
POMBASE|SPAC2F7.08c - symbol:snf5 "SWI/SNF complex subuni... 214 1.6e-20 2
POMBASE|SPCC16A11.14 - symbol:sfh1 "RSC complex subunit S... 263 4.7e-20 1
SGD|S000000493 - symbol:SNF5 "Subunit of the SWI/SNF chro... 267 1.2e-18 2
UNIPROTKB|G4N850 - symbol:MGG_06315 "Transcription regula... 261 6.0e-18 2
SGD|S000004313 - symbol:SFH1 "Component of the RSC chroma... 224 1.5e-15 1
DICTYBASE|DDB_G0279373 - symbol:snf5 "SNF5 related protei... 179 2.3e-10 1
UNIPROTKB|G4MKE0 - symbol:MGG_10538 "Uncharacterized prot... 130 4.5e-10 3
>FB|FBgn0011715 [details] [associations]
symbol:Snr1 "Snf5-related 1" species:7227 "Drosophila
melanogaster" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;NAS] [GO:0035060 "brahma complex"
evidence=NAS;IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0002165 "instar larval or pupal development" evidence=NAS]
[GO:0001700 "embryonic development via the syncytial blastoderm"
evidence=NAS] [GO:0070984 "SET domain binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0008587
"imaginal disc-derived wing margin morphogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] InterPro:IPR006939
InterPro:IPR017393 Pfam:PF04855 PIRSF:PIRSF038126 EMBL:AE014297
GO:GO:0045893 GO:GO:0008285 GO:GO:0008586 GO:GO:0007474
GO:GO:0007517 GO:GO:0008544 GO:GO:0043044 GO:GO:0000228
GO:GO:0008587 GO:GO:0035060 GO:GO:0070983 eggNOG:NOG291299
PANTHER:PTHR10019 GeneTree:ENSGT00440000038585 KO:K11648
OMA:QFAEVLC EMBL:U28485 EMBL:AY070501 RefSeq:NP_730935.1
UniGene:Dm.4358 DIP:DIP-17554N IntAct:Q24090 MINT:MINT-332338
STRING:Q24090 EnsemblMetazoa:FBtr0078682 GeneID:40657
KEGG:dme:Dmel_CG1064 UCSC:CG1064-RA CTD:40657 FlyBase:FBgn0011715
HOGENOM:HOG000202416 InParanoid:Q24090 OrthoDB:EOG4CRJFN
GenomeRNAi:40657 NextBio:819884 Uniprot:Q24090
Length = 370
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 262/371 (70%), Positives = 316/371 (85%)
Query: 1 MSVRTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLL 60
M+++TYGDKP++FQ+EE G++Y +GSEVGNY+R FRG LYKKYPG+ R +SNEERKRL
Sbjct: 1 MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLA 60
Query: 61 DTAGINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEPL-VPRESKTKKAVPWAPS 119
++ G++SH LASSV+LL+ EV+DI+ GNDEKY+AVS++T VPRESK+KK + P+
Sbjct: 61 ES-GLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKKQPQYVPT 119
Query: 120 LPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEI 179
+PNSSHLDAVPQATP+NRNRV+ KKVRTFP+CFDDTDP+ ENA+ E LVPIRLDME+
Sbjct: 120 MPNSSHLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAAQKECLVPIRLDMEL 179
Query: 180 EGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTD 239
EGQKLRDTFTWNKN E++ITPEQFAEVLCDDLDLNPL FVPAIAQ+IRQQ +
Sbjct: 180 EGQKLRDTFTWNKN---------ESMITPEQFAEVLCDDLDLNPLPFVPAIAQAIRQQIE 230
Query: 240 AFPAEN-LLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGG 298
AFP + +L+E DQRV++KLNIHVGNTSLVDQ+EWDMSEK N+ E+FA++LC ELGLGG
Sbjct: 231 AFPNDPPILEETCDQRVIVKLNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGG 290
Query: 299 EFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKI 358
EFVTAIAYSIRGQLSWH RTYAFSEAPL ++ PFR+ S++D W+PFLETLTDAEMEKKI
Sbjct: 291 EFVTAIAYSIRGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKI 350
Query: 359 RDQDRNTRESK 369
RDQDRNTR +
Sbjct: 351 RDQDRNTRRMR 361
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 196/265 (73%), Positives = 226/265 (85%)
Query: 366 RESKTKKAVPWAPSLPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENAS 425
RESK+KK + P++PNSSHLDAVPQATP+NRNRV+ KKVRTFP+CFDDTDP+ ENA+
Sbjct: 106 RESKSKKQPQYVPTMPNSSHLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAA 165
Query: 426 HTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQSI 485
E LVPIRLDME+EGQKLRDTFTWNKNE++ITPEQFAEVLCDDLDLNPL FVPAIAQ+I
Sbjct: 166 QKECLVPIRLDMELEGQKLRDTFTWNKNESMITPEQFAEVLCDDLDLNPLPFVPAIAQAI 225
Query: 486 RQQTDAFPAEN-LLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
RQQ +AFP + +L+E DQRV++KLNIHVGNTSLVDQ+EWDMSEK N+ E+FA++LC E
Sbjct: 226 RQQIEAFPNDPPILEETCDQRVIVKLNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAE 285
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVTAIAYSIRGQLSWH RTYAFSEAPL ++ PFR+ S++D W+PFLETLTDAE
Sbjct: 286 LGLGGEFVTAIAYSIRGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAE 345
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANTTTGW
Sbjct: 346 MEKKIRDQDRNTRRMRRLANTTTGW 370
>ZFIN|ZDB-GENE-041114-5 [details] [associations]
symbol:smarcb1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily b, member 1a"
species:7955 "Danio rerio" [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0044772 "mitotic cell cycle phase transition" evidence=IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IBA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0006337 "nucleosome disassembly" evidence=IBA] [GO:0030154
"cell differentiation" evidence=IBA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IBA] [GO:0090544
"BAF-type complex" evidence=IBA] [GO:0006281 "DNA repair"
evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR006939 InterPro:IPR017393
Pfam:PF04855 PIRSF:PIRSF038126 ZFIN:ZDB-GENE-041114-5 GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 GO:GO:0016585 GO:GO:0000228
eggNOG:NOG291299 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
HOGENOM:HOG000015760 HOVERGEN:HBG011709 KO:K11648 OMA:QFAEVLC
OrthoDB:EOG4BK53X EMBL:BC085668 IPI:IPI00481110
RefSeq:NP_001007297.1 UniGene:Dr.84320 STRING:Q5U379 PRIDE:Q5U379
Ensembl:ENSDART00000049944 GeneID:799716 KEGG:dre:799716 CTD:799716
InParanoid:Q5U379 NextBio:20933945 ArrayExpress:Q5U379 Bgee:Q5U379
Uniprot:Q5U379
Length = 373
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 255/369 (69%), Positives = 297/369 (80%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+TYG KPI FQ+EE+GDFY IGSEVGNYLRMFRGSLYK+YP L RR + EERK+++ ++
Sbjct: 5 KTYGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLSRRLATVEERKKIVASS 64
Query: 64 GINSHC-LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLP 121
+ + LA+SVTLLK SEVE+I +G+DEKYKAVSI TEP RE K K+ W P+LP
Sbjct: 65 HDHGYTTLATSVTLLKASEVEEIFDGHDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLP 124
Query: 122 NSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIE 180
NSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLVPIRLDMEI+
Sbjct: 125 NSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQQEVLVPIRLDMEID 184
Query: 181 GQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA 240
GQKLRD FTWN N E L+TPE FAE+LCDDLDL+PL FVPAIA +IRQQ ++
Sbjct: 185 GQKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIES 235
Query: 241 FPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF 300
+P +++LDE DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELGLGGEF
Sbjct: 236 YPTDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF 295
Query: 301 VTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRD 360
VT IAYSIRGQLSWHQRTYAFSE PLP VE R+ ++DQW P LETLTDAEMEKKIRD
Sbjct: 296 VTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD 355
Query: 361 QDRNTRESK 369
QDRNTR +
Sbjct: 356 QDRNTRRMR 364
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 185/265 (69%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 109 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 168
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE FAE+LCDDLDL+PL FVPAIA +
Sbjct: 169 SQQEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASA 228
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++LDE DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 229 IRQQIESYPTDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 288
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQRTYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 289 LGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 348
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 349 MEKKIRDQDRNTRRMRRLANTAPAW 373
>RGD|1308761 [details] [associations]
symbol:Smarcb1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily b, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0001824 "blastocyst development" evidence=ISO]
[GO:0001835 "blastocyst hatching" evidence=ISO] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006337 "nucleosome disassembly"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030957 "Tat protein binding" evidence=ISO]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=ISO] [GO:0045090 "retroviral genome replication"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 RGD:1308761 GO:GO:0008285 GO:GO:0030154
GO:GO:0051091 GO:GO:0005730 GO:GO:0045944 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0006337 GO:GO:0000228 GO:GO:0001741 EMBL:CH473988
GO:GO:0001835 GO:GO:0043923 eggNOG:NOG291299 PANTHER:PTHR10019
CTD:6598 HOGENOM:HOG000015760 HOVERGEN:HBG011709 KO:K11648
GO:GO:0045090 OrthoDB:EOG4BK53X UniGene:Rn.73954 EMBL:BC099195
IPI:IPI00389414 RefSeq:NP_001020899.1 IntAct:Q4KLI0 STRING:Q4KLI0
GeneID:361825 KEGG:rno:361825 UCSC:RGD:1308761 InParanoid:Q4KLI0
NextBio:677745 Genevestigator:Q4KLI0 Uniprot:Q4KLI0
Length = 376
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 250/369 (67%), Positives = 299/369 (81%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 GINSHC-LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLP 121
+ + LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+ W P+LP
Sbjct: 68 HDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQWVPTLP 127
Query: 122 NSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIE 180
NSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLVPIRLDMEI+
Sbjct: 128 NSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEID 187
Query: 181 GQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA 240
GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA +IRQQ ++
Sbjct: 188 GQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIES 238
Query: 241 FPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF 300
+P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+ELGLGGEF
Sbjct: 239 YPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF 298
Query: 301 VTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRD 360
VT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAEMEKKIRD
Sbjct: 299 VTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD 358
Query: 361 QDRNTRESK 369
QDRNTR +
Sbjct: 359 QDRNTRRMR 367
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 112 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 171
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 172 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 231
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 232 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 291
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 292 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 351
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 352 MEKKIRDQDRNTRRMRRLANTAPAW 376
>UNIPROTKB|Q5ZK40 [details] [associations]
symbol:SMARCB1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member 1"
species:9031 "Gallus gallus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030957 "Tat protein binding" evidence=IEA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IEA]
[GO:0045090 "retroviral genome replication" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] InterPro:IPR006939
InterPro:IPR017393 Pfam:PF04855 PIRSF:PIRSF038126 GO:GO:0008285
GO:GO:0007399 GO:GO:0030154 GO:GO:0051091 GO:GO:0005730
GO:GO:0045944 GO:GO:0006351 GO:GO:0006338 GO:GO:0003713
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0006337
GO:GO:0000228 GO:GO:0001741 CTD:4320 KO:K07993 eggNOG:NOG291299
PANTHER:PTHR10019 GeneTree:ENSGT00440000038585 HOGENOM:HOG000015760
HOVERGEN:HBG011709 OMA:QFAEVLC GO:GO:0045090 EMBL:AJ720244
IPI:IPI00735132 RefSeq:NP_001034344.1 UniGene:Gga.4349
UniGene:Gga.48681 STRING:Q5ZK40 Ensembl:ENSGALT00000009622
GeneID:769489 KEGG:gga:769489 InParanoid:Q5ZK40 OrthoDB:EOG4BK53X
NextBio:20813862 Uniprot:Q5ZK40
Length = 386
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 254/379 (67%), Positives = 300/379 (79%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+EE+G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 GIN--SHC---------LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTK 111
N SH LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K
Sbjct: 68 HENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAK 127
Query: 112 KAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVL 170
+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVL
Sbjct: 128 RNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVL 187
Query: 171 VPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAI 230
VPIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAI
Sbjct: 188 VPIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAI 238
Query: 231 AQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRL 290
A +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++L
Sbjct: 239 ASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKL 298
Query: 291 CTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLT 350
C+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLT
Sbjct: 299 CSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLT 358
Query: 351 DAEMEKKIRDQDRNTRESK 369
DAEMEKKIRDQDRNTR +
Sbjct: 359 DAEMEKKIRDQDRNTRRMR 377
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 122 REQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 181
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 182 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 241
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 242 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 301
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 302 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 361
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 362 MEKKIRDQDRNTRRMRRLANTAPAW 386
>ZFIN|ZDB-GENE-991008-16 [details] [associations]
symbol:smarcb1b "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily b, member 1b"
species:7955 "Danio rerio" [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0090544 "BAF-type complex" evidence=IBA] [GO:0006281 "DNA
repair" evidence=IBA] [GO:0006337 "nucleosome disassembly"
evidence=IBA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IBA] [GO:0030154 "cell differentiation" evidence=IBA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IBA] [GO:0044772 "mitotic cell cycle phase transition"
evidence=IBA] InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 ZFIN:ZDB-GENE-991008-16 GO:GO:0006338
GO:GO:0016585 GO:GO:0000228 PANTHER:PTHR10019
GeneTree:ENSGT00440000038585 EMBL:CR936477 IPI:IPI00858745
Ensembl:ENSDART00000062190 ArrayExpress:F1QKK0 Bgee:F1QKK0
Uniprot:F1QKK0
Length = 382
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 256/372 (68%), Positives = 294/372 (79%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KPI FQ+EE+GDFY IGSEVGNYLRMFRGSLYK+YP L+RR S EERK+++
Sbjct: 17 KTFGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKIV--- 73
Query: 64 GINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLPN 122
+SH A+SVTLLK SE E+I EGNDEKYKAVSI TEP RE K K+ W P+LPN
Sbjct: 74 -ASSH--ATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLPN 130
Query: 123 SSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEG 181
SSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLVPIRLDMEI+G
Sbjct: 131 SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDG 190
Query: 182 QKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAF 241
QKLRD FTWN N E L+TPE FAE+LCDDLDLNPL FVPAIA +IRQQ +++
Sbjct: 191 QKLRDAFTWNMN---------EKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESY 241
Query: 242 PAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFV 301
P +++L+E DQRV+IKLNIHVGN SLVDQ EWDMSEKENS E FA++LC+ELGLGGEFV
Sbjct: 242 PTDSILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPESFALKLCSELGLGGEFV 301
Query: 302 TAIAYSIRGQLSWHQRTYAF----SEAPLPVVEAPFRSHSESDQWSPFLETLTDAEMEKK 357
T IAYSIRGQLSWHQRTYAF SE PLP VE R+ ++DQW P LETLTDAEMEKK
Sbjct: 302 TTIAYSIRGQLSWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKK 361
Query: 358 IRDQDRNTRESK 369
IRDQDRNTR +
Sbjct: 362 IRDQDRNTRRMR 373
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 184/269 (68%), Positives = 209/269 (77%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 114 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 173
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE FAE+LCDDLDLNPL FVPAIA +
Sbjct: 174 SQAEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASA 233
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L+E DQRV+IKLNIHVGN SLVDQ EWDMSEKENS E FA++LC+E
Sbjct: 234 IRQQIESYPTDSILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPESFALKLCSE 293
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAF----SEAPLPVVEAPFRSHSESDQWSPFLETL 600
LGLGGEFVT IAYSIRGQLSWHQRTYAF SE PLP VE R+ ++DQW P LETL
Sbjct: 294 LGLGGEFVTTIAYSIRGQLSWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETL 353
Query: 601 TDAEMEKKIXXXXXXXXXXXXLANTTTGW 629
TDAEMEKKI LANT W
Sbjct: 354 TDAEMEKKIRDQDRNTRRMRRLANTAPAW 382
>UNIPROTKB|Q5BIN2 [details] [associations]
symbol:SMARCB1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member 1"
species:9913 "Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045090 "retroviral genome replication" evidence=IEA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0008285 GO:GO:0007399 GO:GO:0030154
GO:GO:0051091 GO:GO:0005730 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0006337 GO:GO:0000228
GO:GO:0001741 GO:GO:0001835 GO:GO:0043923 eggNOG:NOG291299
PANTHER:PTHR10019 GeneTree:ENSGT00440000038585 EMBL:BT021192
EMBL:BC133572 IPI:IPI00717869 RefSeq:NP_001035647.1 UniGene:Bt.4638
STRING:Q5BIN2 PRIDE:Q5BIN2 Ensembl:ENSBTAT00000013170 GeneID:537412
KEGG:bta:537412 CTD:6598 HOGENOM:HOG000015760 HOVERGEN:HBG011709
KO:K11648 OMA:QFAEVLC NextBio:20877131 ArrayExpress:Q5BIN2
GO:GO:0045090 Uniprot:Q5BIN2
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNAKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>UNIPROTKB|E2RMD3 [details] [associations]
symbol:SMARCB1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045090 "retroviral genome replication"
evidence=IEA] [GO:0043923 "positive regulation by host of viral
transcription" evidence=IEA] [GO:0030957 "Tat protein binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] InterPro:IPR006939 InterPro:IPR017393
Pfam:PF04855 PIRSF:PIRSF038126 GO:GO:0008285 GO:GO:0030154
GO:GO:0051091 GO:GO:0005730 GO:GO:0045944 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0006337 GO:GO:0000228 GO:GO:0001741 GO:GO:0001835
GO:GO:0043923 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
CTD:6598 KO:K11648 OMA:QFAEVLC GO:GO:0045090 EMBL:AAEX03014841
RefSeq:XP_857270.2 ProteinModelPortal:E2RMD3
Ensembl:ENSCAFT00000022399 GeneID:486407 KEGG:cfa:486407
NextBio:20860190 Uniprot:E2RMD3
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>UNIPROTKB|Q12824 [details] [associations]
symbol:SMARCB1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member 1"
species:9606 "Homo sapiens" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0001741 "XY body" evidence=IEA]
[GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0045090 "retroviral genome replication"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0015074
"DNA integration" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0002039 "p53 binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IMP;NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0043923 "positive regulation by host of viral
transcription" evidence=IMP] [GO:0030957 "Tat protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0019048 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030154 GO:GO:0051091 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 Orphanet:1465 GO:GO:0006337 GO:GO:0000228
GO:GO:0001741 GO:GO:0015074 GO:GO:0001835 GO:GO:0043923 MIM:162091
Orphanet:93921 Orphanet:263662 eggNOG:NOG291299 PANTHER:PTHR10019
Orphanet:231108 CTD:6598 HOGENOM:HOG000015760 HOVERGEN:HBG011709
KO:K11648 GO:GO:0045090 OrthoDB:EOG4BK53X EMBL:U04847 EMBL:Y17118
EMBL:Y17119 EMBL:Y17120 EMBL:Y17121 EMBL:Y17122 EMBL:Y17123
EMBL:Y17124 EMBL:Y17125 EMBL:Y17126 EMBL:AJ011738 EMBL:AJ011737
EMBL:AB017523 EMBL:CR456581 EMBL:AK021419 EMBL:DQ230988
EMBL:BC117114 EMBL:BC143667 IPI:IPI00029695 IPI:IPI00745019
PIR:S54705 RefSeq:NP_001007469.1 RefSeq:NP_003064.2
UniGene:Hs.534350 ProteinModelPortal:Q12824 DIP:DIP-27550N
IntAct:Q12824 MINT:MINT-94943 STRING:Q12824 PhosphoSite:Q12824
DMDM:51338799 PaxDb:Q12824 PRIDE:Q12824 DNASU:6598
Ensembl:ENST00000263121 Ensembl:ENST00000407422 GeneID:6598
KEGG:hsa:6598 UCSC:uc002zya.3 GeneCards:GC22P024129 HGNC:HGNC:11103
HPA:CAB009196 HPA:HPA018248 HPA:HPA019127 MIM:601607 MIM:609322
MIM:614608 neXtProt:NX_Q12824 Orphanet:69077 PharmGKB:PA35953
ChiTaRS:SMARCB1 GenomeRNAi:6598 NextBio:25665 ArrayExpress:Q12824
Bgee:Q12824 CleanEx:HS_SMARCB1 Genevestigator:Q12824
GermOnline:ENSG00000099956 Uniprot:Q12824
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>UNIPROTKB|F2Z4X9 [details] [associations]
symbol:SMARCB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045090
"retroviral genome replication" evidence=IEA] [GO:0043923 "positive
regulation by host of viral transcription" evidence=IEA]
[GO:0030957 "Tat protein binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001741 "XY body" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] InterPro:IPR006939 InterPro:IPR017393
Pfam:PF04855 PIRSF:PIRSF038126 GO:GO:0008285 GO:GO:0030154
GO:GO:0051091 GO:GO:0005730 GO:GO:0045944 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0006337 GO:GO:0000228 GO:GO:0001741 GO:GO:0001835
GO:GO:0043923 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
CTD:6598 KO:K11648 OMA:QFAEVLC GO:GO:0045090 EMBL:CU468588
EMBL:CU570757 RefSeq:XP_001929472.1 UniGene:Ssc.16668
ProteinModelPortal:F2Z4X9 Ensembl:ENSSSCT00000011031
GeneID:100154735 KEGG:ssc:100154735 Uniprot:F2Z4X9
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>MGI|MGI:1328366 [details] [associations]
symbol:Smarcb1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily b, member 1"
species:10090 "Mus musculus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0001741 "XY body" evidence=IDA] [GO:0001824
"blastocyst development" evidence=IMP] [GO:0001835 "blastocyst
hatching" evidence=IMP] [GO:0002039 "p53 binding" evidence=ISO]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IBA]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IBA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IBA] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0044772 "mitotic cell cycle phase transition" evidence=IBA]
[GO:0045090 "retroviral genome replication" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0071564 "npBAF complex" evidence=IDA]
[GO:0071565 "nBAF complex" evidence=IDA] InterPro:IPR006939
InterPro:IPR017393 Pfam:PF04855 PIRSF:PIRSF038126 MGI:MGI:1328366
GO:GO:0008285 GO:GO:0007399 GO:GO:0030154 GO:GO:0051091
GO:GO:0005730 GO:GO:0045944 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0006337 GO:GO:0000228 GO:GO:0001741
GO:GO:0001835 GO:GO:0043923 eggNOG:NOG291299 PANTHER:PTHR10019
GeneTree:ENSGT00440000038585 CTD:6598 HOGENOM:HOG000015760
HOVERGEN:HBG011709 KO:K11648 OMA:QFAEVLC GO:GO:0045090
OrthoDB:EOG4BK53X EMBL:AJ011740 EMBL:AJ011739 EMBL:BC025163
IPI:IPI00129145 IPI:IPI00350396 RefSeq:NP_035548.1
UniGene:Mm.279751 UniGene:Mm.405473 ProteinModelPortal:Q9Z0H3
DIP:DIP-34373N IntAct:Q9Z0H3 STRING:Q9Z0H3 PhosphoSite:Q9Z0H3
PaxDb:Q9Z0H3 PRIDE:Q9Z0H3 Ensembl:ENSMUST00000000925
Ensembl:ENSMUST00000121304 GeneID:20587 KEGG:mmu:20587
InParanoid:Q9Z0H3 NextBio:298887 Bgee:Q9Z0H3 Genevestigator:Q9Z0H3
GermOnline:ENSMUSG00000000902 Uniprot:Q9Z0H3
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>UNIPROTKB|G3V935 [details] [associations]
symbol:Smarcb1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily b, member 1, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0001741 "XY body" evidence=IEA]
[GO:0001835 "blastocyst hatching" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030957 "Tat protein binding" evidence=IEA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IEA] [GO:0045090 "retroviral genome replication"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0006338 GO:GO:0016585 GO:GO:0000228
EMBL:CH473988 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
OMA:QFAEVLC UniGene:Rn.73954 ProteinModelPortal:G3V935 PRIDE:G3V935
Ensembl:ENSRNOT00000029458 Uniprot:G3V935
Length = 385
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/378 (66%), Positives = 298/378 (78%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLV 171
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENAS EVLV
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV 187
Query: 172 PIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIA 231
PIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLNPL FVPAIA
Sbjct: 188 PIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLNPLTFVPAIA 238
Query: 232 QSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLC 291
+IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC
Sbjct: 239 SAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC 298
Query: 292 TELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTD 351
+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTD
Sbjct: 299 SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD 358
Query: 352 AEMEKKIRDQDRNTRESK 369
AEMEKKIRDQDRNTR +
Sbjct: 359 AEMEKKIRDQDRNTRRMR 376
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 182/265 (68%), Positives = 210/265 (79%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENA 424
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPLCFDD DP+ I ENA
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA 180
Query: 425 SHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQS 484
S EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDDLDLNPL FVPAIA +
Sbjct: 181 SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA 240
Query: 485 IRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 544
IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS EKFA++LC+E
Sbjct: 241 IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE 300
Query: 545 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 604
LGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW P LETLTDAE
Sbjct: 301 LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE 360
Query: 605 MEKKIXXXXXXXXXXXXLANTTTGW 629
MEKKI LANT W
Sbjct: 361 MEKKIRDQDRNTRRMRRLANTAPAW 385
>UNIPROTKB|G5E975 [details] [associations]
symbol:SMARCB1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily b, member 1, isoform
CRA_c" species:9606 "Homo sapiens" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0005730 EMBL:CH471095 GO:GO:0006338
GO:GO:0016585 GO:GO:0000228 EMBL:AP000350 EMBL:AP000349
PANTHER:PTHR10019 OMA:QFAEVLC UniGene:Hs.534350 HGNC:HGNC:11103
ChiTaRS:SMARCB1 ProteinModelPortal:G5E975 PRIDE:G5E975
Ensembl:ENST00000344921 ArrayExpress:G5E975 Bgee:G5E975
Uniprot:G5E975
Length = 394
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 250/387 (64%), Positives = 299/387 (77%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 GINSHC-LASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKKAVPWAPSLP 121
+ + LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+ W P+LP
Sbjct: 68 HDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQWVPTLP 127
Query: 122 NSSH-LDAVPQATPVNRNRVNQKKVRTFPL-C-----------------FDDTDPSCIFE 162
NSSH LDAVP +T +NRNR+ + K RTFPL C FDD DP+ I E
Sbjct: 128 NSSHHLDAVPCSTTINRNRMGRDKKRTFPLWCGCIAALTLRADSALVLHFDDHDPAVIHE 187
Query: 163 NASHTEVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLN 222
NAS EVLVPIRLDMEI+GQKLRD FTWN N E L+TPE F+E+LCDDLDLN
Sbjct: 188 NASQPEVLVPIRLDMEIDGQKLRDAFTWNMN---------EKLMTPEMFSEILCDDLDLN 238
Query: 223 PLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENS 282
PL FVPAIA +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSEKENS
Sbjct: 239 PLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENS 298
Query: 283 AEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQW 342
EKFA++LC+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ ++DQW
Sbjct: 299 PEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQW 358
Query: 343 SPFLETLTDAEMEKKIRDQDRNTRESK 369
P LETLTDAEMEKKIRDQDRNTR +
Sbjct: 359 CPLLETLTDAEMEKKIRDQDRNTRRMR 385
Score = 818 (293.0 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
Identities = 154/220 (70%), Positives = 176/220 (80%)
Query: 410 LCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDD 469
L FDD DP+ I ENAS EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDD
Sbjct: 175 LHFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDD 234
Query: 470 LDLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSE 529
LDLNPL FVPAIA +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSE
Sbjct: 235 LDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSE 294
Query: 530 KENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSE 589
KENS EKFA++LC+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ +
Sbjct: 295 KENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGD 354
Query: 590 SDQWSPFLETLTDAEMEKKIXXXXXXXXXXXXLANTTTGW 629
+DQW P LETLTDAEMEKKI LANT W
Sbjct: 355 ADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW 394
Score = 143 (55.4 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPL 410
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPL
Sbjct: 112 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPL 157
>UNIPROTKB|B5MCL5 [details] [associations]
symbol:SMARCB1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member 1"
species:9606 "Homo sapiens" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR006939 Pfam:PF04855 GO:GO:0005730
GO:GO:0006338 GO:GO:0000228 EMBL:AP000350 EMBL:AP000349
PANTHER:PTHR10019 HOGENOM:HOG000015760 HOVERGEN:HBG011709
HGNC:HGNC:11103 ChiTaRS:SMARCB1 IPI:IPI00879096
ProteinModelPortal:B5MCL5 STRING:B5MCL5 Ensembl:ENST00000407082
ArrayExpress:B5MCL5 Bgee:B5MCL5 Uniprot:B5MCL5
Length = 339
Score = 821 (294.1 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 157/220 (71%), Positives = 180/220 (81%)
Query: 150 LCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPE 209
L FDD DP+ I ENAS EVLVPIRLDMEI+GQKLRD FTWN N E L+TPE
Sbjct: 120 LSFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMN---------EKLMTPE 170
Query: 210 QFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLV 269
F+E+LCDDLDLNPL FVPAIA +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLV
Sbjct: 171 MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV 230
Query: 270 DQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVV 329
DQ EWDMSEKENS EKFA++LC+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP V
Sbjct: 231 DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV 290
Query: 330 EAPFRSHSESDQWSPFLETLTDAEMEKKIRDQDRNTRESK 369
E R+ ++DQW P LETLTDAEMEKKIRDQDRNTR +
Sbjct: 291 EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMR 330
Score = 820 (293.7 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 154/220 (70%), Positives = 176/220 (80%)
Query: 410 LCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDD 469
L FDD DP+ I ENAS EVLVPIRLDMEI+GQKLRD FTWN NE L+TPE F+E+LCDD
Sbjct: 120 LSFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDD 179
Query: 470 LDLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSE 529
LDLNPL FVPAIA +IRQQ +++P +++L++ DQRV+IKLNIHVGN SLVDQ EWDMSE
Sbjct: 180 LDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSE 239
Query: 530 KENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSE 589
KENS EKFA++LC+ELGLGGEFVT IAYSIRGQLSWHQ+TYAFSE PLP VE R+ +
Sbjct: 240 KENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGD 299
Query: 590 SDQWSPFLETLTDAEMEKKIXXXXXXXXXXXXLANTTTGW 629
+DQW P LETLTDAEMEKKI LANT W
Sbjct: 300 ADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW 339
Score = 326 (119.8 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 66/109 (60%), Positives = 84/109 (77%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP 102
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEP 116
>WB|WBGene00011111 [details] [associations]
symbol:snfc-5 species:6239 "Caenorhabditis elegans"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0009792 GO:GO:0006898 GO:GO:0018991
GO:GO:0006915 GO:GO:0002119 GO:GO:0040017 GO:GO:0006338
GO:GO:0040035 GO:GO:0016585 GO:GO:0000228 EMBL:Z32683
eggNOG:NOG291299 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
HOGENOM:HOG000015760 KO:K11648 PIR:E88427 PIR:S43599
RefSeq:NP_497890.1 ProteinModelPortal:Q21831 IntAct:Q21831
STRING:Q21831 PaxDb:Q21831 EnsemblMetazoa:R07E5.3.1
EnsemblMetazoa:R07E5.3.2 GeneID:175571 KEGG:cel:CELE_R07E5.3
UCSC:R07E5.3 CTD:175571 WormBase:R07E5.3 InParanoid:Q21831
OMA:DTFTWNM NextBio:888722 Uniprot:Q21831
Length = 381
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 187/376 (49%), Positives = 253/376 (67%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+TYG +P SF ++E G+ Y IGSE+G YLR+ RG+LYKKYP L+R+ +++++ +L A
Sbjct: 10 QTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDDKDKLKQIA 69
Query: 64 GINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEPLVPRE---SKTKKAVP---WA 117
N+ L +++ LL+ EV+++L+G++EKY+A P PR S+T P WA
Sbjct: 70 MSNAF-LHTNIMLLRAHEVDELLDGSEEKYRAAG--AAPSTPRTEGASRTVAKTPATGWA 126
Query: 118 PS--LPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSC-IFENASHTEVLVPIR 174
S HL++VP + P+ +R + K R +D + S + +NA E LVPIR
Sbjct: 127 GQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLEMSKRVMKNAEEGEDLVPIR 185
Query: 175 LDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSI 234
LDME++G KLRDTFT+NKN E +ITPE AE++C+DLDL +F PAI +I
Sbjct: 186 LDMELDGIKLRDTFTFNKN---------EKMITPEMIAEIMCEDLDLPLAVFQPAITAAI 236
Query: 235 RQQTDAFPAENLLD-EVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 293
QQ +A LD + DQR V+KLNI+VGN SLVDQ EWDMS+ NS E+F+ +C E
Sbjct: 237 NQQLEASTEAPPLDVNICDQRAVLKLNINVGNQSLVDQFEWDMSDPNNSPEEFSRNICKE 296
Query: 294 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 353
LGLGGEF++ IAYSIRGQL W+QRTYAFSE+PL V+ PFR+ SE + W PFLETLTDAE
Sbjct: 297 LGLGGEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDCPFRTSSEVESWGPFLETLTDAE 356
Query: 354 MEKKIRDQDRNTRESK 369
+EKK+RDQDRNTR +
Sbjct: 357 IEKKMRDQDRNTRRMR 372
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 136/255 (53%), Positives = 175/255 (68%)
Query: 359 RDQDRNTRESKTKKAVPWAPS--LPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTD 416
R + + +KT A WA S HL++VP + P+ +R + K R +D +
Sbjct: 109 RTEGASRTVAKTP-ATGWAGQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLE 166
Query: 417 PSC-IFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPL 475
S + +NA E LVPIRLDME++G KLRDTFT+NKNE +ITPE AE++C+DLDL
Sbjct: 167 MSKRVMKNAEEGEDLVPIRLDMELDGIKLRDTFTFNKNEKMITPEMIAEIMCEDLDLPLA 226
Query: 476 LFVPAIAQSIRQQTDAFPAENLLD-EVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSA 534
+F PAI +I QQ +A LD + DQR V+KLNI+VGN SLVDQ EWDMS+ NS
Sbjct: 227 VFQPAITAAINQQLEASTEAPPLDVNICDQRAVLKLNINVGNQSLVDQFEWDMSDPNNSP 286
Query: 535 EKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWS 594
E+F+ +C ELGLGGEF++ IAYSIRGQL W+QRTYAFSE+PL V+ PFR+ SE + W
Sbjct: 287 EEFSRNICKELGLGGEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDCPFRTSSEVESWG 346
Query: 595 PFLETLTDAEMEKKI 609
PFLETLTDAE+EKK+
Sbjct: 347 PFLETLTDAEIEKKM 361
>UNIPROTKB|Q21831 [details] [associations]
symbol:snfc-5 "Protein SNFC-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR006939 InterPro:IPR017393 Pfam:PF04855
PIRSF:PIRSF038126 GO:GO:0009792 GO:GO:0006898 GO:GO:0018991
GO:GO:0006915 GO:GO:0002119 GO:GO:0040017 GO:GO:0006338
GO:GO:0040035 GO:GO:0016585 GO:GO:0000228 EMBL:Z32683
eggNOG:NOG291299 PANTHER:PTHR10019 GeneTree:ENSGT00440000038585
HOGENOM:HOG000015760 KO:K11648 PIR:E88427 PIR:S43599
RefSeq:NP_497890.1 ProteinModelPortal:Q21831 IntAct:Q21831
STRING:Q21831 PaxDb:Q21831 EnsemblMetazoa:R07E5.3.1
EnsemblMetazoa:R07E5.3.2 GeneID:175571 KEGG:cel:CELE_R07E5.3
UCSC:R07E5.3 CTD:175571 WormBase:R07E5.3 InParanoid:Q21831
OMA:DTFTWNM NextBio:888722 Uniprot:Q21831
Length = 381
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 187/376 (49%), Positives = 253/376 (67%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+TYG +P SF ++E G+ Y IGSE+G YLR+ RG+LYKKYP L+R+ +++++ +L A
Sbjct: 10 QTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDDKDKLKQIA 69
Query: 64 GINSHCLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEPLVPRE---SKTKKAVP---WA 117
N+ L +++ LL+ EV+++L+G++EKY+A P PR S+T P WA
Sbjct: 70 MSNAF-LHTNIMLLRAHEVDELLDGSEEKYRAAG--AAPSTPRTEGASRTVAKTPATGWA 126
Query: 118 PS--LPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTDPSC-IFENASHTEVLVPIR 174
S HL++VP + P+ +R + K R +D + S + +NA E LVPIR
Sbjct: 127 GQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLEMSKRVMKNAEEGEDLVPIR 185
Query: 175 LDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSI 234
LDME++G KLRDTFT+NKN E +ITPE AE++C+DLDL +F PAI +I
Sbjct: 186 LDMELDGIKLRDTFTFNKN---------EKMITPEMIAEIMCEDLDLPLAVFQPAITAAI 236
Query: 235 RQQTDAFPAENLLD-EVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTE 293
QQ +A LD + DQR V+KLNI+VGN SLVDQ EWDMS+ NS E+F+ +C E
Sbjct: 237 NQQLEASTEAPPLDVNICDQRAVLKLNINVGNQSLVDQFEWDMSDPNNSPEEFSRNICKE 296
Query: 294 LGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWSPFLETLTDAE 353
LGLGGEF++ IAYSIRGQL W+QRTYAFSE+PL V+ PFR+ SE + W PFLETLTDAE
Sbjct: 297 LGLGGEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDCPFRTSSEVESWGPFLETLTDAE 356
Query: 354 MEKKIRDQDRNTRESK 369
+EKK+RDQDRNTR +
Sbjct: 357 IEKKMRDQDRNTRRMR 372
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 136/255 (53%), Positives = 175/255 (68%)
Query: 359 RDQDRNTRESKTKKAVPWAPS--LPNSSHLDAVPQATPVNRNRVNQKKVRTFPLCFDDTD 416
R + + +KT A WA S HL++VP + P+ +R + K R +D +
Sbjct: 109 RTEGASRTVAKTP-ATGWAGQQVTSGSHHLESVPCSCPIAHSR-GRMKHRELVYSAEDLE 166
Query: 417 PSC-IFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPL 475
S + +NA E LVPIRLDME++G KLRDTFT+NKNE +ITPE AE++C+DLDL
Sbjct: 167 MSKRVMKNAEEGEDLVPIRLDMELDGIKLRDTFTFNKNEKMITPEMIAEIMCEDLDLPLA 226
Query: 476 LFVPAIAQSIRQQTDAFPAENLLD-EVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSA 534
+F PAI +I QQ +A LD + DQR V+KLNI+VGN SLVDQ EWDMS+ NS
Sbjct: 227 VFQPAITAAINQQLEASTEAPPLDVNICDQRAVLKLNINVGNQSLVDQFEWDMSDPNNSP 286
Query: 535 EKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPVVEAPFRSHSESDQWS 594
E+F+ +C ELGLGGEF++ IAYSIRGQL W+QRTYAFSE+PL V+ PFR+ SE + W
Sbjct: 287 EEFSRNICKELGLGGEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDCPFRTSSEVESWG 346
Query: 595 PFLETLTDAEMEKKI 609
PFLETLTDAE+EKK+
Sbjct: 347 PFLETLTDAEIEKKM 361
>UNIPROTKB|C9JTA6 [details] [associations]
symbol:SMARCB1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member 1"
species:9606 "Homo sapiens" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR006939 Pfam:PF04855 GO:GO:0005730
GO:GO:0006338 GO:GO:0000228 EMBL:AP000350 EMBL:AP000349
PANTHER:PTHR10019 HOGENOM:HOG000015760 HGNC:HGNC:11103
ChiTaRS:SMARCB1 IPI:IPI00879156 STRING:C9JTA6
Ensembl:ENST00000417137 ArrayExpress:C9JTA6 Bgee:C9JTA6
Uniprot:C9JTA6
Length = 227
Score = 455 (165.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 94/159 (59%), Positives = 118/159 (74%)
Query: 4 RTYGDKPISFQIEENGDFYCIGSEVGNYLRMFRGSLYKKYPGLFRRTISNEERKRLLDTA 63
+T+G KP+ FQ+E++G+FY IGSEVGNYLRMFRGSLYK+YP L+RR + EERK+++ ++
Sbjct: 8 KTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASS 67
Query: 64 -------GINSH---CLASSVTLLKVSEVEDILEGNDEKYKAVSIHTEP-LVPRESKTKK 112
H LA+SVTLLK SEVE+IL+GNDEKYKAVSI TEP RE K K+
Sbjct: 68 HGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 127
Query: 113 AVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPL 150
W P+LPNSSH LDAVP +T +NRNR+ + K RTFPL
Sbjct: 128 NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPL 166
Score = 177 (67.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/96 (45%), Positives = 56/96 (58%)
Query: 102 PLVPRESKTKKAVPWAPSLPNSSHLDAVPQAT-PVNRNRVNQKKVRT---FPLCFDDTDP 157
P +P S AVP + ++ N + + + T P+ + +R L FDD DP
Sbjct: 133 PTLPNSSHHLDAVPCSTTI-NRNRMGRDKKRTFPLWCGCIAALTLRADSALVLHFDDHDP 191
Query: 158 SCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKN 193
+ I ENAS EVLVPIRLDMEI+GQKLRD FTWN N
Sbjct: 192 AVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMN 227
Score = 174 (66.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 34/44 (77%), Positives = 36/44 (81%)
Query: 410 LCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKN 453
L FDD DP+ I ENAS EVLVPIRLDMEI+GQKLRD FTWN N
Sbjct: 184 LHFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMN 227
Score = 143 (55.4 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 366 RESKTKKAVPWAPSLPNSSH-LDAVPQATPVNRNRVNQKKVRTFPL 410
RE K K+ W P+LPNSSH LDAVP +T +NRNR+ + K RTFPL
Sbjct: 121 REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPL 166
Score = 38 (18.4 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 255 VVIKLNIHVGNTSLVDQIEWDMS 277
V I+L++ + L D W+M+
Sbjct: 205 VPIRLDMEIDGQKLRDAFTWNMN 227
Score = 38 (18.4 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 506 VVIKLNIHVGNTSLVDQIEWDMS 528
V I+L++ + L D W+M+
Sbjct: 205 VPIRLDMEIDGQKLRDAFTWNMN 227
>ASPGD|ASPL0000069514 [details] [associations]
symbol:AN7297 species:162425 "Emericella nidulans"
[GO:1900400 "regulation of iron ion import by regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:1900389 "regulation of glucose import by regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0010972 "negative regulation of G2/M transition
of mitotic cell cycle" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006939 Pfam:PF04855
GO:GO:0006338 EMBL:BN001304 EMBL:AACD01000127 GO:GO:0000228
eggNOG:NOG291299 PANTHER:PTHR10019 KO:K11648 OrthoDB:EOG4J9R74
RefSeq:XP_680566.1 EnsemblFungi:CADANIAT00000141 GeneID:2870177
KEGG:ani:AN7297.2 HOGENOM:HOG000168208 OMA:DTFTWNL Uniprot:Q5AWN3
Length = 798
Score = 325 (119.5 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 95/253 (37%), Positives = 140/253 (55%)
Query: 390 PQAT-PVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTF 448
PQ P +R R +K R + D E H LVPIRLD++ E K+RDTF
Sbjct: 200 PQLLYPAHRRRPGNRKTRELRVSRKDMKTQS--EQLEH---LVPIRLDIDWEKVKIRDTF 254
Query: 449 TWNKNETLITPEQFAEVLCDDLDL-----NPLLFVPAIAQSIRQQT-DAFPAENLLDEVH 502
TWN ++ +++P+ FAE L +DL L PL V I+QSI++Q D +P ++ +E
Sbjct: 255 TWNLHDRVVSPDLFAEKLVEDLGLPLESCGPL--VRMISQSIQEQICDFYPHVHIEEEAL 312
Query: 503 DQ------------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGE 550
D R+V+KLNI +G +LVDQ EWD+++ NS E+FA R+ T+L L GE
Sbjct: 313 DPHLPYSAYKNDELRIVVKLNITIGQHTLVDQFEWDINDPHNSPEEFAARMTTDLSLSGE 372
Query: 551 FVTAIAYSIR--GQL---SWHQRTYAFSEAPL--PVVEA---P------FRSHSESDQWS 594
F TAIA+SIR QL S + ++ F P+ P ++A P FR + +++
Sbjct: 373 FTTAIAHSIREQSQLFTKSLYIVSHPFDGRPVEDPDLKASFLPSPLTSSFRPFQAAKEFT 432
Query: 595 PFLETLTDAEMEK 607
P+L L +AE+E+
Sbjct: 433 PYLYELNEAELER 445
Score = 313 (115.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 102/288 (35%), Positives = 148/288 (51%)
Query: 130 PQAT-PVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTF 188
PQ P +R R +K R + D E H LVPIRLD++ E K+RDTF
Sbjct: 200 PQLLYPAHRRRPGNRKTRELRVSRKDMKTQS--EQLEH---LVPIRLDIDWEKVKIRDTF 254
Query: 189 TWNKNGTVFSFCSLETLITPEQFAEVLCDDLDL-----NPLLFVPAIAQSIRQQT-DAFP 242
TWN + V ++P+ FAE L +DL L PL V I+QSI++Q D +P
Sbjct: 255 TWNLHDRV---------VSPDLFAEKLVEDLGLPLESCGPL--VRMISQSIQEQICDFYP 303
Query: 243 AENLLDEVHDQ------------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRL 290
++ +E D R+V+KLNI +G +LVDQ EWD+++ NS E+FA R+
Sbjct: 304 HVHIEEEALDPHLPYSAYKNDELRIVVKLNITIGQHTLVDQFEWDINDPHNSPEEFAARM 363
Query: 291 CTELGLGGEFVTAIAYSIR--GQL---SWHQRTYAFSEAPL--PVVEA---P------FR 334
T+L L GEF TAIA+SIR QL S + ++ F P+ P ++A P FR
Sbjct: 364 TTDLSLSGEFTTAIAHSIREQSQLFTKSLYIVSHPFDGRPVEDPDLKASFLPSPLTSSFR 423
Query: 335 SHSESDQWSPFLETLTDAEMEKKIRDQDRNTRESKTKKAVPWAPSLPN 382
+ +++P+L L +AE+E+ R+ R K P+LP+
Sbjct: 424 PFQAAKEFTPYLYELNEAELERTEVSFQRDQRRQKRSVNRRGGPALPD 471
>CGD|CAL0001815 [details] [associations]
symbol:orf19.5093 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0033262 "regulation of DNA replication involved in S phase"
evidence=IEA] [GO:0031055 "chromatin remodeling at centromere"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
InterPro:IPR006939 Pfam:PF04855 CGD:CAL0001815 GO:GO:0006338
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0000228 eggNOG:NOG291299
KO:K11770 PANTHER:PTHR10019 RefSeq:XP_717556.1 RefSeq:XP_717630.1
STRING:Q5A769 GeneID:3640733 GeneID:3640813 KEGG:cal:CaO19.12559
KEGG:cal:CaO19.5093 Uniprot:Q5A769
Length = 352
Score = 260 (96.6 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 93/311 (29%), Positives = 147/311 (47%)
Query: 89 NDEKYKAVSIHTEPLVPRESKTKKAVPWAPSLPNSSHLDAVPQATP----VNRNRVNQKK 144
ND ++ I+ P + + + + ++ + D P +TP +N N+ Q +
Sbjct: 24 NDSD-NSLLINVAPTGRQAKRHIQQINYSEEFGDDLDFDEFPSSTPGTRSLNENKA-QIE 81
Query: 145 VRTFPLCFDDTDPSCIFENASHTE------VLVPIRLDMEI--EGQKLRDTFTWNKNGTV 196
+ + L + P I E +E VL+PI++ +E QKL D+F WN N
Sbjct: 82 AQRYSLAKNTPTPKRILEKPVLSELVEKPVVLIPIKIMIENLNTNQKLIDSFMWNLN--- 138
Query: 197 FSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAFP-AENL-LDEVHDQR 254
E+LITP +FAEV+C DLDL P IA SI QQ + + A NL L
Sbjct: 139 ------ESLITPTEFAEVVCSDLDL-PFSMAAQIADSINQQIEEYSYASNLQLPNKGPYN 191
Query: 255 VVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYS-----IR 309
V I L++++ D+ EWDM++ E + E FA + +LGL EF AI+++ IR
Sbjct: 192 VTIDLSVNLNKQLYQDRFEWDMNQNEVTPEIFAEIVVADLGLSLEFKNAISHALHEIIIR 251
Query: 310 GQLSWHQRTYAFSEAPLPVV-----EAPFRSHSES------DQWSPFLETLTDAEMEKKI 358
+ T+ L +V E R +E+ D+W P +E LT +E+E++
Sbjct: 252 VKKEVIDGTFNNEMHNLHLVKGIMFEQGIRIFTENSVQNGNDRWEPLVEVLTSSEIERRE 311
Query: 359 RDQDRNTRESK 369
++ RN R K
Sbjct: 312 NERVRNLRRLK 322
Score = 255 (94.8 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 71/209 (33%), Positives = 110/209 (52%)
Query: 366 RESKTK-KAVPWAPSLPNSSHLDAVPQATP----VNRNRVNQKKVRTFPLCFDDTDPSCI 420
R++K + + ++ + D P +TP +N N+ Q + + + L + P I
Sbjct: 39 RQAKRHIQQINYSEEFGDDLDFDEFPSSTPGTRSLNENKA-QIEAQRYSLAKNTPTPKRI 97
Query: 421 FENASHTE------VLVPIRLDMEI--EGQKLRDTFTWNKNETLITPEQFAEVLCDDLDL 472
E +E VL+PI++ +E QKL D+F WN NE+LITP +FAEV+C DLDL
Sbjct: 98 LEKPVLSELVEKPVVLIPIKIMIENLNTNQKLIDSFMWNLNESLITPTEFAEVVCSDLDL 157
Query: 473 NPLLFVPAIAQSIRQQTDAFP-AENL-LDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEK 530
P IA SI QQ + + A NL L V I L++++ D+ EWDM++
Sbjct: 158 -PFSMAAQIADSINQQIEEYSYASNLQLPNKGPYNVTIDLSVNLNKQLYQDRFEWDMNQN 216
Query: 531 ENSAEKFAVRLCTELGLGGEFVTAIAYSI 559
E + E FA + +LGL EF AI++++
Sbjct: 217 EVTPEIFAEIVVADLGLSLEFKNAISHAL 245
>POMBASE|SPAC2F7.08c [details] [associations]
symbol:snf5 "SWI/SNF complex subunit Snf5" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0000991 "core RNA
polymerase II binding transcription factor activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:1900389 "regulation of glucose import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR006939 Pfam:PF04855 PomBase:SPAC2F7.08c
GO:GO:0005794 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0045944
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0010811 GO:GO:0000991 GO:GO:0010972 eggNOG:NOG291299
PANTHER:PTHR10019 GO:GO:1900389 GO:GO:1900400 KO:K11648 PIR:T38556
RefSeq:NP_592979.1 DIP:DIP-48379N STRING:Q09699
EnsemblFungi:SPAC2F7.08c.1 GeneID:2541801 KEGG:spo:SPAC2F7.08c
OrthoDB:EOG4J9R74 NextBio:20802889 Uniprot:Q09699
Length = 632
Score = 214 (80.4 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 53/138 (38%), Positives = 80/138 (57%)
Query: 251 HDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRG 310
+D R++IKL+I +G +L+DQ EW++ E+SAE+FA +C +LGL GEF TA+A+SIR
Sbjct: 250 NDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCTAVAHSIRE 309
Query: 311 QLSWHQRT-----YAF--SEAP--------LPVVEAPFR-SHSESDQWSPFLETLTDAEM 354
Q + + Y F SE LP ++ R S ES ++P + L DAEM
Sbjct: 310 QCQMYIKYLSLIGYLFDGSEIEDEEVRSYILPPLKNTLRFSDMESSSFAPMIYELNDAEM 369
Query: 355 EKKIRDQDRNTRESKTKK 372
E++ R DR R + ++
Sbjct: 370 ERQDRGYDREARRMRRRQ 387
Score = 195 (73.7 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 49/123 (39%), Positives = 73/123 (59%)
Query: 502 HDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRG 561
+D R++IKL+I +G +L+DQ EW++ E+SAE+FA +C +LGL GEF TA+A+SIR
Sbjct: 250 NDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCTAVAHSIRE 309
Query: 562 QLSWHQRT-----YAF--SEAP--------LPVVEAPFR-SHSESDQWSPFLETLTDAEM 605
Q + + Y F SE LP ++ R S ES ++P + L DAEM
Sbjct: 310 QCQMYIKYLSLIGYLFDGSEIEDEEVRSYILPPLKNTLRFSDMESSSFAPMIYELNDAEM 369
Query: 606 EKK 608
E++
Sbjct: 370 ERQ 372
Score = 129 (50.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 430 LVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLD--LNPLLFVPAIAQSIRQ 487
LVPIRL+++ + KLRD+FTWN + I+ +QFAE +C D D L+ + V I++SI+
Sbjct: 141 LVPIRLEIDADRYKLRDSFTWNLYDKCISLDQFAEQICIDYDIPLHNVHIVQNISKSIQA 200
Query: 488 QTDAF-P--AENLLDEVHD 503
Q + + P A++ L V D
Sbjct: 201 QINDYEPRKAQSNLSFVSD 219
Score = 111 (44.1 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 170 LVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLD--LNPLLFV 227
LVPIRL+++ + KLRD+FTWN ++ C I+ +QFAE +C D D L+ + V
Sbjct: 141 LVPIRLEIDADRYKLRDSFTWN----LYDKC-----ISLDQFAEQICIDYDIPLHNVHIV 191
Query: 228 PAIAQSIRQQTDAF-P--AENLLDEVHD 252
I++SI+ Q + + P A++ L V D
Sbjct: 192 QNISKSIQAQINDYEPRKAQSNLSFVSD 219
Score = 94 (38.1 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 428 EVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQ 487
++ + I+LD+ I L D F WN + E+FA V+C DL L+ F A+A SIR+
Sbjct: 251 DLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGE-FCTAVAHSIRE 309
Query: 488 QTDAF 492
Q +
Sbjct: 310 QCQMY 314
Score = 37 (18.1 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 532 NSAEKFAVRLCTELGLGGEFVTA 554
N AE+ VR+C + E+ TA
Sbjct: 577 NPAERMTVRICCHDCIN-EYFTA 598
>POMBASE|SPCC16A11.14 [details] [associations]
symbol:sfh1 "RSC complex subunit Sfh1" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003677 "DNA binding" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR006939 InterPro:IPR013088 Pfam:PF00320 Pfam:PF04855
PomBase:SPCC16A11.14 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
GO:GO:0000790 GO:GO:0016586 GO:GO:0043044 PIR:T41087
RefSeq:NP_588001.1 DIP:DIP-38847N IntAct:Q9USM3 MINT:MINT-4708220
STRING:Q9USM3 PRIDE:Q9USM3 EnsemblFungi:SPCC16A11.14.1
GeneID:2539144 KEGG:spo:SPCC16A11.14 eggNOG:NOG291299 KO:K11770
OMA:ISHALHE OrthoDB:EOG4DNJCT NextBio:20800316 PANTHER:PTHR10019
Uniprot:Q9USM3
Length = 418
Score = 263 (97.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 70/225 (31%), Positives = 116/225 (51%)
Query: 394 PVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQ-KLRDTFTWNK 452
P N + +T + D C A +V +PIRLD+E+ +L+DTF WN
Sbjct: 84 PTGNNIYPRFATKTRHIYVTDEQLKCA---AEERDVYIPIRLDIELPNNYRLKDTFLWNM 140
Query: 453 NETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAF-P-AENLLDEVHDQRVVIKL 510
NE ++TP+ FA++LC DLDL+ ++ I+ SIR Q + + P AE + + + VV +
Sbjct: 141 NEQVMTPDVFAQILCADLDLSTNVYGTQISSSIRAQIEEYAPVAEVPMPKGQEMLVVFNI 200
Query: 511 NIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTY 570
+ + S DQ+EW+++ + E+F+V C +LGL GE IAY+I L ++
Sbjct: 201 QVQLAQLSYNDQVEWNLTSPL-TPEEFSVLTCNDLGLSGESRPEIAYAIHECLLKLKKNA 259
Query: 571 AFSEAP------LPVVEAPFRSHSES--DQWSPFLETLTDAEMEK 607
+ P +P +A R ++ W P LET++ + +K
Sbjct: 260 CEGDLPDYDSDAVPGTKAGPRQDMDTLGALWQPVLETVSLEDAKK 304
Score = 244 (91.0 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 76/250 (30%), Positives = 123/250 (49%)
Query: 134 PVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQ-KLRDTFTWNK 192
P N + +T + D C A +V +PIRLD+E+ +L+DTF WN
Sbjct: 84 PTGNNIYPRFATKTRHIYVTDEQLKCA---AEERDVYIPIRLDIELPNNYRLKDTFLWNM 140
Query: 193 NGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAF-P-AENLLDEV 250
N E ++TP+ FA++LC DLDL+ ++ I+ SIR Q + + P AE + +
Sbjct: 141 N---------EQVMTPDVFAQILCADLDLSTNVYGTQISSSIRAQIEEYAPVAEVPMPKG 191
Query: 251 HDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRG 310
+ VV + + + S DQ+EW+++ + E+F+V C +LGL GE IAY+I
Sbjct: 192 QEMLVVFNIQVQLAQLSYNDQVEWNLTSPL-TPEEFSVLTCNDLGLSGESRPEIAYAIHE 250
Query: 311 QLSWHQRTYAFSEAP------LPVVEAPFRSHSES--DQWSPFLETLTDAEMEKKIRDQD 362
L ++ + P +P +A R ++ W P LET++ E KK +
Sbjct: 251 CLLKLKKNACEGDLPDYDSDAVPGTKAGPRQDMDTLGALWQPVLETVS-LEDAKK----N 305
Query: 363 RNTRESKTKK 372
N RE+ K+
Sbjct: 306 ENNRENLVKQ 315
>SGD|S000000493 [details] [associations]
symbol:SNF5 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IMP;IPI] [GO:0016514 "SWI/SNF complex" evidence=IDA;IMP]
[GO:0006338 "chromatin remodeling" evidence=IEA;IGI;IMP]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0005987 "sucrose
catabolic process" evidence=IMP] [GO:0000436 "carbon catabolite
activation of transcription from RNA polymerase II promoter"
evidence=IGI] InterPro:IPR006939 Pfam:PF04855 SGD:S000000493
GO:GO:0006351 EMBL:BK006936 GO:GO:0006338 GO:GO:0016514
GO:GO:0000724 GO:GO:0005987 EMBL:X76053 GO:GO:0000228 GO:GO:0001102
GO:GO:0000436 GeneTree:ENSGT00700000104696 KO:K14708
eggNOG:NOG291299 PANTHER:PTHR10019 KO:K11648 OrthoDB:EOG4J9R74
EMBL:M36482 EMBL:Z36158 PIR:S44551 RefSeq:NP_009848.4
RefSeq:NP_009853.3 DIP:DIP-2364N IntAct:P18480 MINT:MINT-424303
STRING:P18480 PaxDb:P18480 PeptideAtlas:P18480 EnsemblFungi:YBR289W
GeneID:852592 GeneID:852597 KEGG:sce:YBR289W KEGG:sce:YBR294W
CYGD:YBR289w OMA:IREQVHM NextBio:971757 Genevestigator:P18480
GermOnline:YBR289W Uniprot:P18480
Length = 905
Score = 267 (99.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 69/194 (35%), Positives = 102/194 (52%)
Query: 389 VPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQK--LRD 446
+PQ NR + K++ + ++T +E LVPIRL+ + + + LRD
Sbjct: 427 IPQVEVGNRKHYLEDKLKVYKQAMNET-----------SEQLVPIRLEFDQDRDRFFLRD 475
Query: 447 TFTWNKNETLITPEQFAEVLCDDL---DLNPLLFVPAIAQSIRQQTDAFPAENLLDEVHD 503
T WNKN+ LI E F + + D D + I QSI++Q F ++ D
Sbjct: 476 TLLWNKNDKLIKIEDFVDDMLRDYRFEDATREQHIDTICQSIQEQIQEFQGNPYIELNQD 535
Query: 504 Q------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAY 557
+ R+ IKL+I VG L+DQ EWD+S +N E+FA +C EL L GEFVTAIA+
Sbjct: 536 RLGGDDLRIRIKLDIVVGQNQLIDQFEWDISNSDNCPEEFAESMCQELELPGEFVTAIAH 595
Query: 558 SIRGQLSWHQRTYA 571
SIR Q+ + ++ A
Sbjct: 596 SIREQVHMYHKSLA 609
Score = 242 (90.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 69/203 (33%), Positives = 102/203 (50%)
Query: 129 VPQATPVNRNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQK--LRD 186
+PQ NR + K++ + ++T +E LVPIRL+ + + + LRD
Sbjct: 427 IPQVEVGNRKHYLEDKLKVYKQAMNET-----------SEQLVPIRLEFDQDRDRFFLRD 475
Query: 187 TFTWNKNGTVFSFCSLETLITPEQFAEVLCDDL---DLNPLLFVPAIAQSIRQQTDAFPA 243
T WNKN + LI E F + + D D + I QSI++Q F
Sbjct: 476 TLLWNKN---------DKLIKIEDFVDDMLRDYRFEDATREQHIDTICQSIQEQIQEFQG 526
Query: 244 ENLLDEVHDQ------RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLG 297
++ D+ R+ IKL+I VG L+DQ EWD+S +N E+FA +C EL L
Sbjct: 527 NPYIELNQDRLGGDDLRIRIKLDIVVGQNQLIDQFEWDISNSDNCPEEFAESMCQELELP 586
Query: 298 GEFVTAIAYSIRGQLSWHQRTYA 320
GEFVTAIA+SIR Q+ + ++ A
Sbjct: 587 GEFVTAIAHSIREQVHMYHKSLA 609
Score = 66 (28.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 325 PLPVVEAPFRSHSESDQWSPFLETLTDAEMEKKIRDQDRNTRESK 369
P ++ +R +ES ++P L ++ AE+E+ +D+DR+TR +
Sbjct: 631 PTITLDDVYRPAAESKIFTPNLLQISAAELERLDKDKDRDTRRKR 675
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 576 PLPVVEAPFRSHSESDQWSPFLETLTDAEMEK 607
P ++ +R +ES ++P L ++ AE+E+
Sbjct: 631 PTITLDDVYRPAAESKIFTPNLLQISAAELER 662
>UNIPROTKB|G4N850 [details] [associations]
symbol:MGG_06315 "Transcription regulatory protein SNF5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006939 Pfam:PF04855
GO:GO:0006338 EMBL:CM001234 GO:GO:0000228 PANTHER:PTHR10019
KO:K11648 RefSeq:XP_003717270.1 EnsemblFungi:MGG_06315T0
GeneID:2684470 KEGG:mgr:MGG_06315 Uniprot:G4N850
Length = 771
Score = 261 (96.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 90/278 (32%), Positives = 137/278 (49%)
Query: 137 RNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNGTV 196
+N+ K T PL + D + + A E LVPIR+D++ + KLRDTFTWN + +
Sbjct: 158 KNKPRPGKRTTEPLKWRKKD---MRKQAEQHEELVPIRIDVDYDKVKLRDTFTWNLHDRL 214
Query: 197 FSFCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDA----FPA----ENLLD 248
S + Q E L +P L+ P + Q RQ D +P+ E+ LD
Sbjct: 215 VSVD-----LFARQLLEDLGLTPQKDPTLYSPVLTQVGRQILDQLEDFYPSVCSDEDALD 269
Query: 249 -EV------HDQ-RVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEF 300
E+ +D+ R+++KLNI +G +LVDQ EW+++ NS E+FA + +L L GEF
Sbjct: 270 PELPYSAYKNDEMRILVKLNITIGQVTLVDQFEWEINNPINSPEEFANSMSRDLSLSGEF 329
Query: 301 VTAIAYSIR--GQL---SWHQRTYAFSEAP----------LPV-VEAPFRSHSESDQWSP 344
TAIA+ IR QL S + + F P LP + + FR ++ +++P
Sbjct: 330 ATAIAHCIREQSQLFTKSLYSIGHPFDGRPVEDPDLVAAFLPSPIPSVFRPQQQAKEYAP 389
Query: 345 FLETLTDAEMEKKIRDQDRNTRESKTKKAVPWAPSLPN 382
+L LTDA++E+ R R K P LP+
Sbjct: 390 YLYELTDADLERNEVIFSREQRRQKRSVNRRGGPQLPD 427
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 58/185 (31%), Positives = 92/185 (49%)
Query: 442 QKLRDT-FTWNKNETLITP--EQFAEVLCDDLDLNPLLFVPAIAQSIRQQTDAFPAENLL 498
Q L D T K+ TL +P Q + D L+ F P++ P
Sbjct: 223 QLLEDLGLTPQKDPTLYSPVLTQVGRQILDQLED----FYPSVCSDEDALDPELPYSAYK 278
Query: 499 DEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYS 558
++ + R+++KLNI +G +LVDQ EW+++ NS E+FA + +L L GEF TAIA+
Sbjct: 279 ND--EMRILVKLNITIGQVTLVDQFEWEINNPINSPEEFANSMSRDLSLSGEFATAIAHC 336
Query: 559 IR--GQL---SWHQRTYAFSEAP----------LPV-VEAPFRSHSESDQWSPFLETLTD 602
IR QL S + + F P LP + + FR ++ +++P+L LTD
Sbjct: 337 IREQSQLFTKSLYSIGHPFDGRPVEDPDLVAAFLPSPIPSVFRPQQQAKEYAPYLYELTD 396
Query: 603 AEMEK 607
A++E+
Sbjct: 397 ADLER 401
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 397 RNRVNQKKVRTFPLCFDDTDPSCIFENASHTEVLVPIRLDMEIEGQKLRDTFTWNKNETL 456
+N+ K T PL + D + + A E LVPIR+D++ + KLRDTFTWN ++ L
Sbjct: 158 KNKPRPGKRTTEPLKWRKKD---MRKQAEQHEELVPIRIDVDYDKVKLRDTFTWNLHDRL 214
Query: 457 ITPEQFAEVLCDDLDL----NPLLFVPAIAQSIRQQTD 490
++ + FA L +DL L +P L+ P + Q RQ D
Sbjct: 215 VSVDLFARQLLEDLGLTPQKDPTLYSPVLTQVGRQILD 252
Score = 37 (18.1 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 378 PSLPNSSHLDAVPQATP 394
PS+P +PQ TP
Sbjct: 579 PSIPVGLRTPGMPQRTP 595
>SGD|S000004313 [details] [associations]
symbol:SFH1 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0007059 "chromosome
segregation" evidence=IGI] [GO:0031055 "chromatin remodeling at
centromere" evidence=IMP] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IMP] [GO:0033262 "regulation of DNA replication involved
in S phase" evidence=IGI] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0000228 "nuclear chromosome" evidence=IEA] InterPro:IPR006939
InterPro:IPR017393 Pfam:PF04855 PIRSF:PIRSF038126 SGD:S000004313
GO:GO:0000086 GO:GO:0007059 GO:GO:0006355 EMBL:BK006945
GO:GO:0006302 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0000228 EMBL:U20618 GO:GO:0031055 GO:GO:0033262
eggNOG:NOG291299 KO:K11770 PANTHER:PTHR10019 PIR:S53399
RefSeq:NP_013425.1 ProteinModelPortal:Q06168 DIP:DIP-1898N
IntAct:Q06168 MINT:MINT-398787 STRING:Q06168 PaxDb:Q06168
PeptideAtlas:Q06168 EnsemblFungi:YLR321C GeneID:851032
KEGG:sce:YLR321C CYGD:YLR321c GeneTree:ENSGT00440000038585
HOGENOM:HOG000074513 OMA:HVIINLT OrthoDB:EOG41NXW4 NextBio:967619
Genevestigator:Q06168 GermOnline:YLR321C Uniprot:Q06168
Length = 426
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 61/223 (27%), Positives = 109/223 (48%)
Query: 400 VNQKKVRTFPLCFDDTDPSCIFENASHTE-VLVPIRLDMEIEGQKLRDTFTWNKNETLIT 458
+N K V + L D + NA+ E +++PI LD+E G ++D F WN N+ I+
Sbjct: 176 INGKVVSPYRLNTDQETKA----NANSGEAIMIPITLDIEHMGHTIKDQFLWNYNDDSIS 231
Query: 459 PEQFAEVLCDDLDLNPLLFVPAIAQSIRQQT---DAFPAENLLDEVHDQRVVIKLNIHVG 515
PE+FA + C DLD+ IA I++Q + A ++ ++H V+I L ++
Sbjct: 232 PEEFASIYCKDLDMTSATLQTQIANIIKEQLKDLENIAATEIMSDLH---VIINLTCNLQ 288
Query: 516 NTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQL-----SW---HQ 567
+ D +W++++K + E+FA + +LGL EF+ I+ S+ + W H
Sbjct: 289 DRFFEDNFQWNLNDKSLTPERFATSIVQDLGLTREFIPLISQSLHETILKIKKDWVDGHL 348
Query: 568 -RTYAFSEAPLPVVEAPFRSHSE-SDQWSPFLETLTDAEMEKK 608
+ + ++A + E W P +E LT E++K+
Sbjct: 349 IQDHVPNDAAFGYLSGIRLDIDELGSNWCPRVEILTKEEIQKR 391
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/244 (26%), Positives = 116/244 (47%)
Query: 140 VNQKKVRTFPLCFDDTDPSCIFENASHTE-VLVPIRLDMEIEGQKLRDTFTWNKNGTVFS 198
+N K V + L D + NA+ E +++PI LD+E G ++D F WN N
Sbjct: 176 INGKVVSPYRLNTDQETKA----NANSGEAIMIPITLDIEHMGHTIKDQFLWNYN----- 226
Query: 199 FCSLETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQQT---DAFPAENLLDEVHDQRV 255
+ I+PE+FA + C DLD+ IA I++Q + A ++ ++H V
Sbjct: 227 ----DDSISPEEFASIYCKDLDMTSATLQTQIANIIKEQLKDLENIAATEIMSDLH---V 279
Query: 256 VIKLNIHVGNTSLVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQL--- 312
+I L ++ + D +W++++K + E+FA + +LGL EF+ I+ S+ +
Sbjct: 280 IINLTCNLQDRFFEDNFQWNLNDKSLTPERFATSIVQDLGLTREFIPLISQSLHETILKI 339
Query: 313 --SW---HQ-RTYAFSEAPLPVVEAPFRSHSE-SDQWSPFLETLTDAEMEKKIRDQDRNT 365
W H + + ++A + E W P +E LT E++K+ +++RN
Sbjct: 340 KKDWVDGHLIQDHVPNDAAFGYLSGIRLDIDELGSNWCPRVEILTKEEIQKREIEKERNL 399
Query: 366 RESK 369
R K
Sbjct: 400 RRLK 403
>DICTYBASE|DDB_G0279373 [details] [associations]
symbol:snf5 "SNF5 related protein" species:44689
"Dictyostelium discoideum" [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006939 Pfam:PF04855
dictyBase:DDB_G0279373 GO:GO:0006338 EMBL:AAFI02000030
GO:GO:0000228 eggNOG:NOG291299 PANTHER:PTHR10019 RefSeq:XP_641825.2
EnsemblProtists:DDB0233488 GeneID:8622017 KEGG:ddi:DDB_G0279373
OMA:REFENII Uniprot:Q54WV6
Length = 496
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 428 EVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQSIRQ 487
+ L+PIRLD++ K+ D WN NE I+PE +++ LC +LD P F I SI
Sbjct: 248 DFLIPIRLDIQSSVYKIGDYLLWNLNERDISPEYYSKRLCIELDY-PEWFEFMITNSIAN 306
Query: 488 QT---DAFPAE-----NLLDEVHDQRVV-IKLNIHVGNTSLVDQIEWDMSEKENSAEKFA 538
Q + E L ++ + +V I L+++V L D+ EWD+ N E FA
Sbjct: 307 QIIYGKSIIKEFRKILPKLKQIFKECIVTISLDLNVNGLYLKDRFEWDIIGP-NLPESFA 365
Query: 539 VRLCTELGLGGEFVTAIAYSIRGQLSWH 566
+ +LGL EF I YSIR Q+ H
Sbjct: 366 KSISMDLGLSREFENIIVYSIREQIQTH 393
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 52/157 (33%), Positives = 75/157 (47%)
Query: 168 EVLVPIRLDMEIEGQKLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDLNPLLFV 227
+ L+PIRLD++ K+ D WN N E I+PE +++ LC +LD P F
Sbjct: 248 DFLIPIRLDIQSSVYKIGDYLLWNLN---------ERDISPEYYSKRLCIELDY-PEWFE 297
Query: 228 PAIAQSIRQQT---DAFPAE-----NLLDEVHDQRVV-IKLNIHVGNTSLVDQIEWDMSE 278
I SI Q + E L ++ + +V I L+++V L D+ EWD+
Sbjct: 298 FMITNSIANQIIYGKSIIKEFRKILPKLKQIFKECIVTISLDLNVNGLYLKDRFEWDIIG 357
Query: 279 KENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWH 315
N E FA + +LGL EF I YSIR Q+ H
Sbjct: 358 P-NLPESFAKSISMDLGLSREFENIIVYSIREQIQTH 393
>UNIPROTKB|G4MKE0 [details] [associations]
symbol:MGG_10538 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000679 InterPro:IPR006939
InterPro:IPR013088 Pfam:PF00320 Pfam:PF04855 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006338
EMBL:CM001231 GO:GO:0000228 KO:K11770 PANTHER:PTHR10019
RefSeq:XP_003710141.1 EnsemblFungi:MGG_10538T0 GeneID:2682131
KEGG:mgr:MGG_10538 Uniprot:G4MKE0
Length = 589
Score = 130 (50.8 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 478 VPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKF 537
V A A+ I ++ F NL D+ + R V++LNIH+G+ D+ EW + +AE F
Sbjct: 289 VTATAEHITADSEDF---NL-DDTY--RCVVELNIHLGSQLYTDKFEWSLLHPPGTAEAF 342
Query: 538 AVRLCTELGLGGEFVTAIAYSI 559
A C +LGL GE+V A+ ++I
Sbjct: 343 AKVTCEDLGLSGEWVPAMTHAI 364
Score = 130 (50.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 227 VPAIAQSIRQQTDAFPAENLLDEVHDQRVVIKLNIHVGNTSLVDQIEWDMSEKENSAEKF 286
V A A+ I ++ F NL D+ + R V++LNIH+G+ D+ EW + +AE F
Sbjct: 289 VTATAEHITADSEDF---NL-DDTY--RCVVELNIHLGSQLYTDKFEWSLLHPPGTAEAF 342
Query: 287 AVRLCTELGLGGEFVTAIAYSI 308
A C +LGL GE+V A+ ++I
Sbjct: 343 AKVTCEDLGLSGEWVPAMTHAI 364
Score = 83 (34.3 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 183 KLRDTFTWNKNGTVFSFCSLETLITPEQFAEVLCDDLDL-NPLLFVPAIAQSIRQQTDAF 241
+L+DTF WN + ETLIT + FA L DLDL N + I++ IR Q + +
Sbjct: 169 RLKDTFMWNLH---------ETLITTDHFATQLAQDLDLPNKAHVIGEISKQIRTQLEEY 219
Score = 74 (31.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 433 IRLDMEIEGQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPLLFVPAIAQSI 485
+ L++ + Q D F W+ T E FA+V C+DL L+ +VPA+ +I
Sbjct: 313 VELNIHLGSQLYTDKFEWSLLHPPGTAEAFAKVTCEDLGLSGE-WVPAMTHAI 364
Score = 71 (30.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 339 SDQWSPFLETLTDAEMEKKIRDQDRNTRESKTKKA 373
+D W P LE L+ EMEK+ D++R R + + A
Sbjct: 420 ADDWEPRLEMLSKEEMEKREGDRERQIRRLRRETA 454
Score = 56 (24.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 31/115 (26%), Positives = 46/115 (40%)
Query: 268 LVDQIEWDMSEKENSAEKFAVRLCTELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLP 327
L D W++ E + + FA +L +L L + A+ I G++S RT E
Sbjct: 170 LKDTFMWNLHETLITTDHFATQLAQDLDLPNK-----AHVI-GEISKQIRTQL--EEYAG 221
Query: 328 VVEAPFRSHSESDQWSPF-LETLTDAEMEKKIRDQDRNTRESKTKKAVPWAPSLP 381
V P HS Q +P T DA I D R + ++ P P+ P
Sbjct: 222 VALHPL-FHSAQKQGAPTQAATDRDASSTPIIGRSDTPLRNAALGRSTPSRPAAP 275
Score = 55 (24.4 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 590 SDQWSPFLETLTDAEMEKK 608
+D W P LE L+ EMEK+
Sbjct: 420 ADDWEPRLEMLSKEEMEKR 438
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 629 617 0.00089 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 619 (66 KB)
Total size of DFA: 334 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.55u 0.08s 56.63t Elapsed: 00:00:18
Total cpu time: 56.56u 0.08s 56.64t Elapsed: 00:00:18
Start: Thu Aug 15 14:38:37 2013 End: Thu Aug 15 14:38:55 2013