BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13561
(99 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322798471|gb|EFZ20143.1| hypothetical protein SINV_04745 [Solenopsis invicta]
Length = 644
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 90/107 (84%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+R LRL SWTTMKVLL
Sbjct: 253 LALSKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRSLRLLRVLKLAQSWTTMKVLL 312
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KF+PDPVP
Sbjct: 313 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTPDKFSPDPVP 359
>gi|328793203|ref|XP_395121.4| PREDICTED: sodium channel protein 60E-like [Apis mellifera]
Length = 2525
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 1114 LALSKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 1173
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT VLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 1174 SIIISTIGALGNLTLVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 1220
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S L+ E + L VLR LR W M+++++ +
Sbjct: 1622 YFTSFWTILDFIIVFVSTFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1681
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1682 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1714
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1930 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMVDFPVSPTLLRVVRVFRIGRILRLIKA 1989
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1990 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 2029
>gi|350422941|ref|XP_003493336.1| PREDICTED: sodium channel protein 60E-like [Bombus impatiens]
Length = 2532
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 1124 LALSKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 1183
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT VLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 1184 SIIISTIGALGNLTLVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 1230
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S L+ E + L VLR LR W M+++++ +
Sbjct: 1631 YFTSFWTILDFIIVFVSTFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1690
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1691 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1723
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1939 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMVDFPVSPTLLRVVRVFRIGRILRLIKA 1998
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1999 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 2038
>gi|307169782|gb|EFN62327.1| Sodium channel protein 60E [Camponotus floridanus]
Length = 1975
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 83/107 (77%), Positives = 90/107 (84%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 592 LALSKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 651
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 652 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTPDKFYPDPVP 698
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1078 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1137
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1138 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1170
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1386 VGLRYHYFTVPWNLFDFLLVLASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1445
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1446 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1485
>gi|383858043|ref|XP_003704512.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein 60E-like
[Megachile rotundata]
Length = 2443
Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 1030 LALSKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 1089
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT VLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 1090 SIIISTIGALGNLTLVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 1136
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S L+ E + L VLR LR W M+++++ +
Sbjct: 1540 YFTSFWTILDFIIVFVSTFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1599
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1600 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1632
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1848 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMVDFPVSPTLLRVVRVFRIGRVLRLIKA 1907
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1908 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1947
>gi|340727515|ref|XP_003402087.1| PREDICTED: sodium channel protein 60E-like [Bombus terrestris]
Length = 2535
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 1125 LALSKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 1184
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT VLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 1185 SIIISTIGALGNLTLVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 1231
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S L+ E + L VLR LR W M+++++ +
Sbjct: 1634 YFTSFWTILDFIIVFVSTFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1693
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1694 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1726
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1942 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMVDFPVSPTLLRVVRVFRIGRILRLIKA 2001
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 2002 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSIF 2041
>gi|380027833|ref|XP_003697620.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein 60E-like [Apis
florea]
Length = 2455
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 1086 LALSKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 1145
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT VLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 1146 SIIISTIGALGNLTLVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 1192
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S L+ E + L VLR LR W M+++++ +
Sbjct: 1544 YFTSFWTILDFIIVFVSTFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1603
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1604 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1636
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1852 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMVDFPVSPTLLRVVRVFRIGRILRLIKA 1911
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1912 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1951
>gi|307213718|gb|EFN89067.1| Sodium channel protein 60E [Harpegnathos saltator]
Length = 1966
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/107 (76%), Positives = 90/107 (84%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 586 LALSKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 645
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLF+KDYT +KF PDPVP
Sbjct: 646 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFNKDYTPDKFYPDPVP 692
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1072 YFTSFWTILDFIIVFVSMFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1131
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1132 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1164
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1380 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1439
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1440 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1479
>gi|332030051|gb|EGI69876.1| Sodium channel protein 60E [Acromyrmex echinatior]
Length = 2004
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 90/107 (84%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS D+F GWN FDLI+V+ASL+DL E VDGLSV+RGLRL SWTTMKVLL
Sbjct: 642 LALSKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLL 701
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 702 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTLDKFYPDPVP 748
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%), Gaps = 12/89 (13%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSWTTMKVLLSII 55
+ L YF WN+FD ++V AS++ D+M +F + +G+R K+L +++
Sbjct: 1436 IGLRYHYFTVPWNLFDFLLVLASILGILMEDIMMDFPRLIKAAKGIR------KLLFALV 1489
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+S + AL N+ +L ++ +I+A+IGM +F
Sbjct: 1490 VS-LPALFNIGALLALITFIYAIIGMSVF 1517
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1128 YFTSFWTILDFIIVFVSMFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1187
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1188 MYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1216
>gi|195401751|ref|XP_002059475.1| GJ18955 [Drosophila virilis]
gi|194142481|gb|EDW58887.1| GJ18955 [Drosophila virilis]
Length = 1908
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 86/107 (80%), Positives = 94/107 (87%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS ++F CGWNIFDLI+VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 609 MALSKEFFLCGWNIFDLIIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 668
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT+EKFAPDPVP
Sbjct: 669 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTAEKFAPDPVP 715
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1669 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1728
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1729 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1761
>gi|158286307|ref|XP_308670.4| AGAP007086-PA [Anopheles gambiae str. PEST]
gi|157020405|gb|EAA04706.4| AGAP007086-PA [Anopheles gambiae str. PEST]
Length = 2961
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 84/107 (78%), Positives = 93/107 (86%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDLI+V+ SL+DL+ E ++GL+VLRGLRL SWTTMKVLL
Sbjct: 742 MALSKDFFLCGWNIFDLIIVSVSLLDLIFELIEGLTVLRGLRLLRVLKLAQSWTTMKVLL 801
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KFAPDPVP
Sbjct: 802 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTPDKFAPDPVP 848
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D ++V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1937 YFSSFWTILDFVIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1996
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1997 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 2029
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2245 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2304
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM LF
Sbjct: 2305 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSLF 2344
>gi|442624679|ref|NP_001261172.1| Na channel protein 60E, isoform M [Drosophila melanogaster]
gi|440214627|gb|AGB93702.1| Na channel protein 60E, isoform M [Drosophila melanogaster]
Length = 2896
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1812 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1871
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1872 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1904
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2120 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2179
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2180 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
>gi|198456218|ref|XP_002138202.1| GA24638 [Drosophila pseudoobscura pseudoobscura]
gi|198135536|gb|EDY68760.1| GA24638 [Drosophila pseudoobscura pseudoobscura]
Length = 2473
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 93/107 (86%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 746 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 805
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT+EKF PDPVP
Sbjct: 806 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTAEKFDPDPVP 852
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1818 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1877
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1878 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1910
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2126 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2185
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2186 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2225
>gi|386768614|ref|NP_726495.3| Na channel protein 60E, isoform G [Drosophila melanogaster]
gi|386768616|ref|NP_001189007.2| Na channel protein 60E, isoform H [Drosophila melanogaster]
gi|383302694|gb|AAF47291.6| Na channel protein 60E, isoform G [Drosophila melanogaster]
gi|383302695|gb|AAM70798.3| Na channel protein 60E, isoform H [Drosophila melanogaster]
Length = 2844
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1812 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1871
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1872 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1904
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2120 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2179
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2180 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
>gi|386768622|ref|NP_001246509.1| Na channel protein 60E, isoform K [Drosophila melanogaster]
gi|383302698|gb|AFH08262.1| Na channel protein 60E, isoform K [Drosophila melanogaster]
Length = 2833
Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1817 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1876
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1877 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1909
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2125 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2184
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2185 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2224
>gi|166215092|sp|Q9W0Y8.5|SCN60_DROME RecName: Full=Sodium channel protein 60E; AltName: Full=Drosophila
ion channel 60; AltName: Full=Drosophila sodium channel
1; AltName: Full=Protein smell-impaired 60E; AltName:
Full=Sodium channel 2; Short=DmNav2
Length = 2821
Score = 154 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1789 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1848
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1849 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1881
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2097 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2156
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2157 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2196
>gi|386768620|ref|NP_001246508.1| Na channel protein 60E, isoform J [Drosophila melanogaster]
gi|383302697|gb|AFH08261.1| Na channel protein 60E, isoform J [Drosophila melanogaster]
Length = 2806
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1812 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1871
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1872 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1904
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2120 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2179
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2180 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
>gi|386768618|ref|NP_001246507.1| Na channel protein 60E, isoform I [Drosophila melanogaster]
gi|383302696|gb|AFH08260.1| Na channel protein 60E, isoform I [Drosophila melanogaster]
Length = 2712
Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 608 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 667
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 668 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 714
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1680 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1739
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1740 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1772
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 1988 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2047
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2048 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2087
>gi|386768624|ref|NP_001246510.1| Na channel protein 60E, isoform L [Drosophila melanogaster]
gi|383302699|gb|AFH08263.1| Na channel protein 60E, isoform L [Drosophila melanogaster]
Length = 2608
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1812 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1871
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1872 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1904
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2120 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2179
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2180 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
>gi|195149447|ref|XP_002015669.1| GL11199 [Drosophila persimilis]
gi|194109516|gb|EDW31559.1| GL11199 [Drosophila persimilis]
Length = 1219
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 93/107 (86%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 618 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 677
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT+EKF PDPVP
Sbjct: 678 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTAEKFDPDPVP 724
>gi|195029359|ref|XP_001987541.1| GH19909 [Drosophila grimshawi]
gi|193903541|gb|EDW02408.1| GH19909 [Drosophila grimshawi]
Length = 2487
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/107 (80%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDLI+VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 745 MALSKDFFLCGWNIFDLIIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 804
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 805 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 851
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1841 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1900
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1901 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1933
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2149 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2208
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2209 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2248
>gi|442624686|ref|NP_001261175.1| Na channel protein 60E, isoform P [Drosophila melanogaster]
gi|440214630|gb|AGB93705.1| Na channel protein 60E, isoform P [Drosophila melanogaster]
Length = 2407
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1812 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1871
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1872 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1904
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2120 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2179
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2180 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2219
>gi|195489849|ref|XP_002092912.1| GE14454 [Drosophila yakuba]
gi|194179013|gb|EDW92624.1| GE14454 [Drosophila yakuba]
Length = 2362
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 612 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 671
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 672 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 718
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1691 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1750
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1751 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1783
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 1999 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2058
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2059 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2098
>gi|194886829|ref|XP_001976692.1| GG23017 [Drosophila erecta]
gi|190659879|gb|EDV57092.1| GG23017 [Drosophila erecta]
Length = 2362
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 612 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 671
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 672 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 718
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1691 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1750
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1751 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1783
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 1999 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2058
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2059 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2098
>gi|194756288|ref|XP_001960411.1| GF13350 [Drosophila ananassae]
gi|190621709|gb|EDV37233.1| GF13350 [Drosophila ananassae]
Length = 2316
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 609 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 668
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 669 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 715
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1668 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1727
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1728 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1760
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 1976 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2035
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2036 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2075
>gi|357604840|gb|EHJ64356.1| putative BSC1 sodium channel protein [Danaus plexippus]
Length = 1991
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 86/107 (80%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MA+S D+F CGWNIFDLI+V+ASL+DL+ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 627 MAMSKDFFACGWNIFDLIIVSASLLDLIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 686
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK YT EKF PDPVP
Sbjct: 687 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKSYTPEKFDPDPVP 733
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W + D +V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1169 YFTSFWTLLDFTIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1228
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1229 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1261
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M + ++LR +R+ +
Sbjct: 1477 IGLRYHYFTVPWNVFDFLLVLASILGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 1536
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1537 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1576
>gi|270009510|gb|EFA05958.1| hypothetical protein TcasGA2_TC008776 [Tribolium castaneum]
Length = 1940
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 84/107 (78%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS ++F CGWNIFDLI+V+AS++DL+ E VDGLSVLRGLRL SW TMKVLL
Sbjct: 483 MALSKEFFYCGWNIFDLIIVSASVLDLIFELVDGLSVLRGLRLLRVLKLAQSWITMKVLL 542
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLF+KDYT EKF PDPVP
Sbjct: 543 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFAKDYTPEKFYPDPVP 589
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W + D ++V SL L+ E + L VLR LR W M+++++ +
Sbjct: 1018 YFTSFWTLLDFLIVFVSLFSLLIEENENLRVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1077
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1078 MYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1106
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1326 IGLRYHYFTVPWNVFDFLLVLASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1385
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM LF
Sbjct: 1386 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMFLF 1425
>gi|189239566|ref|XP_975663.2| PREDICTED: similar to putative BSC1 sodium channel protein
[Tribolium castaneum]
Length = 2283
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 84/107 (78%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS ++F CGWNIFDLI+V+AS++DL+ E VDGLSVLRGLRL SW TMKVLL
Sbjct: 805 MALSKEFFYCGWNIFDLIIVSASVLDLIFELVDGLSVLRGLRLLRVLKLAQSWITMKVLL 864
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLF+KDYT EKF PDPVP
Sbjct: 865 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFAKDYTPEKFYPDPVP 911
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W + D ++V SL L+ E + L VLR LR W M+++++ +
Sbjct: 1361 YFTSFWTLLDFLIVFVSLFSLLIEENENLRVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1420
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1421 MYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1449
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1669 IGLRYHYFTVPWNVFDFLLVLASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1728
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM LF
Sbjct: 1729 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMFLF 1768
>gi|102230389|gb|ABF70206.1| DSC1 [Drosophila melanogaster]
Length = 2409
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/107 (78%), Positives = 91/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTI ALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIRALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1814 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1873
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1874 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1906
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS+ D+M + ++LR +R+ +
Sbjct: 2122 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 2181
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 2182 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 2221
>gi|242008757|ref|XP_002425167.1| sodium channel protein type 2 subunit alpha, putative [Pediculus
humanus corporis]
gi|212508861|gb|EEB12429.1| sodium channel protein type 2 subunit alpha, putative [Pediculus
humanus corporis]
Length = 2203
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 93/107 (86%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS ++F CGWNIFDLI+V+ASL+DL E +DGL+VLRGLRL SWTTMKVLL
Sbjct: 734 LALSKEFFDCGWNIFDLIIVSASLLDLSIEILDGLTVLRGLRLLRVLKLAQSWTTMKVLL 793
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT EKFAPDPVP
Sbjct: 794 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTYEKFAPDPVP 840
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1302 YFTSFWTILDFIIVFVSIFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1361
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1362 MYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1390
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1610 VGLRYHYFTVPWNVFDFLLVLASILGILMEDIMIDFPISPTLLRVVRVFRIGRILRLIKA 1669
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1670 AKGIRKLLFALVVSLPALFNIGALLSLITFIYAIIGMSIF 1709
>gi|195426640|ref|XP_002061419.1| GK20910 [Drosophila willistoni]
gi|194157504|gb|EDW72405.1| GK20910 [Drosophila willistoni]
Length = 2039
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDLI+VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 585 MALSKDFFLCGWNIFDLIIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 644
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 645 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 691
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLS 53
+ YF W I D I+V S+ L+ E + L VLR LR W M+++++
Sbjct: 1379 SKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVN 1438
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1439 ALMYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1469
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS + D+M + ++LR +R+ +
Sbjct: 1689 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 1748
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A++GM LF
Sbjct: 1749 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLF 1788
>gi|385298709|ref|NP_001245290.1| voltage-dependent cation channel SC1 [Bombyx mori]
gi|378829682|gb|AFC61133.1| voltage-dependent cation channel SC1 [Bombyx mori]
Length = 2225
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 84/107 (78%), Positives = 91/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MA+S D+F GWNIFDLI+V+ASL+DL+ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 853 MAMSKDFFAYGWNIFDLIIVSASLLDLIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 912
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK YT +KF PDPVP
Sbjct: 913 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKSYTPDKFDPDPVP 959
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W + D +V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1401 YFTSFWTLLDFTIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1460
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1461 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1493
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M + ++LR +R+ +
Sbjct: 1709 VGLRYHYFTVPWNVFDFLLVLASILGIVMEDIMIDLPISPTLLRVVRVFRIGRILRLIKA 1768
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F + E+ A D +
Sbjct: 1769 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVFG--HVKEQGALDDI 1820
>gi|157135231|ref|XP_001663440.1| voltage-gated sodium channel [Aedes aegypti]
gi|108870254|gb|EAT34479.1| AAEL013277-PA, partial [Aedes aegypti]
Length = 1115
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 94/107 (87%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDLI+V+ASL+DL+ E ++GL+VLRGLRL SWTTMKVLL
Sbjct: 131 MALSKDFFLCGWNIFDLIIVSASLLDLIFELMEGLTVLRGLRLLRVLKLAQSWTTMKVLL 190
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KFAPDPVP
Sbjct: 191 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTPDKFAPDPVP 237
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 470 YFSSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 529
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 530 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 562
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE------------------FVDGLSVLRGLR 42
+ L YF WN+FD ++V AS+ ++ E F G +LR ++
Sbjct: 778 IGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIG-RILRLIK 836
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ K+L ++++S + AL N+ +L ++ +I+A+IGM LF
Sbjct: 837 AAKGIRKLLFALVVS-LPALFNIGALLALITFIYAIIGMSLFGH 879
>gi|378829684|gb|AFC61134.1| voltage-dependent cation channel SC1 [Nilaparvata lugens]
Length = 2122
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS ++F CGWNIFDLI+V+ASL+DL E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 748 MALSKEFFDCGWNIFDLIIVSASLLDLSFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 807
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT +KF PDPVP
Sbjct: 808 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTPDKFDPDPVP 854
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1391 YFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1450
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1451 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1483
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD I+V AS++ D+M +F ++LR +R+ +
Sbjct: 1699 VGLRYHYFTVPWNLFDFILVLASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1758
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1759 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAIIGMSVF 1798
>gi|195353312|ref|XP_002043149.1| GM11913 [Drosophila sechellia]
gi|194127237|gb|EDW49280.1| GM11913 [Drosophila sechellia]
Length = 1556
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 619 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 678
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 679 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 725
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 20/102 (19%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE------------------FVDGLSVLRGLR 42
+ L YF WN+FD ++V AS+ ++ E F G +LR ++
Sbjct: 1207 VGLRYHYFTVPWNMFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIG-RILRLIK 1265
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ K+L ++++S + AL N+ +L ++ +I+A++GM LF
Sbjct: 1266 AAKGIRKLLFALVVS-LPALFNIGALLGLITFIYAILGMSLF 1306
>gi|195586581|ref|XP_002083052.1| GD11909 [Drosophila simulans]
gi|194195061|gb|EDX08637.1| GD11909 [Drosophila simulans]
Length = 1809
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 729 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 788
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 789 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 835
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLS 53
+ YF W I D I+V S+ L+ E + L VLR LR W M+++++
Sbjct: 1150 SKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVN 1209
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1210 ALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1244
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 20/102 (19%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE------------------FVDGLSVLRGLR 42
+ L YF WN+FD ++V AS+ ++ E F G +LR ++
Sbjct: 1460 VGLRYHYFTVPWNVFDFLLVLASIFGILMEDIMIDLPISPTLLRVVRVFRIG-RILRLIK 1518
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ K+L ++++S + AL N+ +L ++ +I+A++GM LF
Sbjct: 1519 AAKGIRKLLFALVVS-LPALFNIGALLGLITFIYAILGMSLF 1559
>gi|227430444|gb|ACP28231.1| IP16407p [Drosophila melanogaster]
Length = 551
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 438 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 497
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 498 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 544
>gi|442624682|ref|NP_001261173.1| Na channel protein 60E, isoform N [Drosophila melanogaster]
gi|440214628|gb|AGB93703.1| Na channel protein 60E, isoform N [Drosophila melanogaster]
Length = 934
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 740 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 799
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 800 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 846
>gi|195119602|ref|XP_002004319.1| GI19864 [Drosophila mojavensis]
gi|193909387|gb|EDW08254.1| GI19864 [Drosophila mojavensis]
Length = 1354
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 92/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS ++F CGWNIFDLI+VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 724 MALSKEFFLCGWNIFDLIIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLL 783
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLT +LVIVIYIFAVIGMQLFSKDYT EKF PDPVP
Sbjct: 784 SIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP 830
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLS 53
+ YF W I D I+V S+ L+ E + L VLR LR W M+++++
Sbjct: 1047 SKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVN 1106
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1107 ALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1141
>gi|3980054|emb|CAA32568.1| sodium channel protein [Drosophila melanogaster]
Length = 264
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 89/105 (84%), Gaps = 8/105 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
MALS D+F CGWNIFDL++VTASL+D++ E VDGLSVLRGLRL SWTTMKVLL
Sbjct: 67 MALSKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRALKLAKSWTTMKVLL 126
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDP 97
SIIISTIGALGNL +LVIVIYIFAVIGMQLFSKDYT EKF PDP
Sbjct: 127 SIIISTIGALGNLRLILVIVIYIFAVIGMQLFSKDYTPEKFDPDP 171
>gi|12658323|gb|AAK01090.1| putative BSC1 sodium channel protein [Blattella germanica]
Length = 2304
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 90/107 (84%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALS +YF CGWNIFDLI+V+ASL+DL E +D L VLR LRL SWTTMKVLL
Sbjct: 786 LALSKEYFACGWNIFDLIIVSASLLDLSFELMDSLVVLRCLRLLRVLKLARSWTTMKVLL 845
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT++KF PDP+P
Sbjct: 846 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTADKFYPDPIP 892
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W I D I+V S+ L+ E + L VLR LR W M+++++ +
Sbjct: 1352 YFTSFWTILDFIIVFVSIFSLLMEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1411
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V ++ IF+++G+Q F +
Sbjct: 1412 MYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKF 1444
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L YF WN+FD ++V AS++ D+M +F ++LR +R+ +
Sbjct: 1660 IGLRYHYFTVPWNLFDFLLVVASILGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKA 1719
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1720 AKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVF 1759
>gi|321478364|gb|EFX89321.1| putative voltage-gated sodium channel protein [Daphnia pulex]
Length = 1527
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLS 53
A D+F+ GWN+FD ++V ASLVDL E V+GLSVLRG+RL SWTTM+VLLS
Sbjct: 547 ATGTDFFRNGWNVFDFVIVLASLVDLGLEIVNGLSVLRGMRLMRVLRLAQSWTTMRVLLS 606
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
II+S++GAL NLTFVL IV+YIFAVIGMQLF +DYT E F PDPVP
Sbjct: 607 IILSSLGALANLTFVLAIVVYIFAVIGMQLFGRDYTPENFYPDPVP 652
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
+ L + YF WN+FDL +V+ S+V D++ EF ++LR +R+ +
Sbjct: 1190 IGLRHHYFTLPWNLFDLCLVSCSVVGLIMEDVLNEFPISPTLLRVVRVFRLGRVLRLVKA 1249
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL +I ++ AL N+ +L ++ +I+A+IGM LF
Sbjct: 1250 AKGIRKLLFALIVSLPALFNIGALLALITFIYAIIGMALFGH 1291
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF W D ++VT S++ + E LS LR LR W MK++++ +
Sbjct: 881 YFSSVWTALDFVIVTVSVISVAVEDSANLSALRSLRTLRALRPLRAISRWQGMKIVVNAL 940
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFS-------KDYTSEKFAPD 96
+ I A+ N+ V ++ +F+++G+QLF D T E+++P
Sbjct: 941 MFAIPAIFNVLLVCLVFWLVFSILGVQLFGGKFYKCIDDETGERYSPQ 988
>gi|328718682|ref|XP_001943530.2| PREDICTED: sodium channel protein 60E-like [Acyrthosiphon pisum]
Length = 1896
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 91/107 (85%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+ALSN++F CGWNIFD+I+VTASL+DL E +DGLSVLR LRL SWTTMKVLL
Sbjct: 459 IALSNEFFNCGWNIFDMIIVTASLLDLSFEMIDGLSVLRCLRLLRVLKLAQSWTTMKVLL 518
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
SIIISTIGALGNLTFVL+I+IYIFAVIGMQLFSK+Y EKF PDPVP
Sbjct: 519 SIIISTIGALGNLTFVLIIIIYIFAVIGMQLFSKEYMPEKFDPDPVP 565
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLSII 55
YF+ W D I+ S+ L+ + + L VLR LR W M+++++ +
Sbjct: 1027 YFKSFWTALDFIIAMMSIFSLLIDENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNAL 1086
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ I ++ N+ V ++ IF+++G+Q F
Sbjct: 1087 MYAIPSIFNVLLVCLVFWLIFSIMGVQFF 1115
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------SWTTMKV 50
YF WN+FD ++V AS++ D+M +F ++LR +R+ + ++
Sbjct: 1341 YFTVPWNVFDFLLVLASVLGILMEDIMIDFPVSPTLLRVVRVFRIGRILRLIKAAKGIRK 1400
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
LL +I ++ AL N+ +L ++ +I+A+IGM +F
Sbjct: 1401 LLFALIVSLPALFNIGALLGLITFIYAIIGMSVF 1434
>gi|170037578|ref|XP_001846634.1| voltage-gated sodium channel [Culex quinquefasciatus]
gi|167880802|gb|EDS44185.1| voltage-gated sodium channel [Culex quinquefasciatus]
Length = 1055
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--SWTTMKVLLSIIIST 58
+ALS D+F CGWNIFDLI+V+ASL+DL+ E ++GL+ LR L+L SWTTMKVLLSIIIST
Sbjct: 16 VALSKDFFSCGWNIFDLIIVSASLLDLIFELMEGLT-LRVLKLAQSWTTMKVLLSIIIST 74
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
IGALGNLTFVL LFSKDYT +KFAPDPVP
Sbjct: 75 IGALGNLTFVL-------------LFSKDYTPDKFAPDPVP 102
>gi|3328018|gb|AAC26741.1| voltage-gated sodium channel alpha subunit [Heliothis virescens]
Length = 98
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 75/88 (85%), Gaps = 8/88 (9%)
Query: 20 VTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALGNLTFVLVI 71
V+ASL+DL+ E VDGLSVLRGLRL SWTTMKVLLSIIISTIGALGNLTFVLVI
Sbjct: 1 VSASLLDLIFELVDGLSVLRGLRLFRVLKLAQSWTTMKVLLSIIISTIGALGNLTFVLVI 60
Query: 72 VIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
VIYIFAVIGMQLFSK YT +KF PDPVP
Sbjct: 61 VIYIFAVIGMQLFSKSYTPDKFDPDPVP 88
>gi|405954000|gb|EKC21550.1| Sodium channel protein type 5 subunit alpha [Crassostrea gigas]
Length = 1986
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF GWN FDL++V AS +D V+G++V+R RL +W TM+VLLSII++T
Sbjct: 796 YFSNGWNNFDLVIVVASWLDFGLSDVEGVNVIRTFRLLRVFKLAQAWRTMRVLLSIIMNT 855
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
+GALGNLT +LVI+IYIFAVIG+QLF YT++KF D VP
Sbjct: 856 LGALGNLTVILVIIIYIFAVIGLQLFRNSYTADKFGEDGVP 896
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVD------LMTEFVDGL----------SVLRGLRLS 44
+ L + YF+ WN+FD +VV SL+ L F L VLR ++ +
Sbjct: 1541 IGLRHHYFRQPWNVFDFVVVVLSLLGIVLADVLANSFNPTLLRVLRVFRIGRVLRLIKAA 1600
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
K+L ++IIS + AL N+ +L +++YI+A+IGM +F
Sbjct: 1601 KGIRKLLFALIIS-LPALINIGALLCLIMYIYAIIGMSVF 1639
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG--LSVLRGLRL-----------SWTTMKVLLS 53
YF W I D +V SL L+ + G +S R LR W +M+++++
Sbjct: 1227 YFTSFWTILDFAIVVISLASLIADATGGEDISAFRSLRTLRAFRPLRAISRWQSMRIVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS------KDYTSEKFAP 95
++ I A+ N+ V ++ IF+++G+Q FS KD + E P
Sbjct: 1287 ALMLAIPAILNVLVVCMVFWLIFSIMGVQFFSGRFYKCKDSSGEVLLP 1334
>gi|332020832|gb|EGI61230.1| Sodium channel protein para [Acromyrmex echinatior]
Length = 1447
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/99 (57%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SLV+L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 876 YFQEGWNIFDFIIVALSLVELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 935
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE-KFAPD 96
+GALGNLTFVL I+I+IFAV+GMQLF K+Y + PD
Sbjct: 936 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDHVDYFPD 974
>gi|365812011|gb|AEX00069.1| voltage-gated sodium channel Nav1.1, partial [Branchiostoma
floridae]
Length = 1715
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 8/98 (8%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIII 56
YF GWNIFD I+VT SLV+L E V GLSVLR RL SW+T+ +L+SII
Sbjct: 596 KQYFTVGWNIFDSIIVTLSLVELGLEGVKGLSVLRSFRLLRVFKLAKSWSTLNLLISIIG 655
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+++GALGNLTF+L IV+YIFAVIGMQLF + YT+E F
Sbjct: 656 NSLGALGNLTFILGIVVYIFAVIGMQLFGEYYTAEAFG 693
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMT-----EFVDGLSVLRGLRL--------SWTTMKVL 51
YF W D I+V SLV L+ E V LR LR M+V+
Sbjct: 1054 KKYFTNAWCWLDFIIVMVSLVSLVAKIMGMENVSAFKSLRTLRALRPLRAISRAEGMRVV 1113
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++GN+ V +I IFA++G+QLF Y
Sbjct: 1114 VNALICAIPSIGNVLLVCLIFWLIFAIMGVQLFGGKY 1150
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW--------TTM 48
A YF GWNIFD +VV S L D++ ++ ++LR +R++
Sbjct: 1368 AFGFKYFSQGWNIFDCVVVVMSILGILLEDIIEKYFVSPTLLRVIRVARIGRILRLIKGA 1427
Query: 49 KVLLSIIIS---TIGALGNLTFVLVIVIYIFAVIGM 81
K + ++I S + AL N+ +L +V++I+A+ GM
Sbjct: 1428 KGIRTLIFSLAISAPALFNIGLLLFLVMFIYAIFGM 1463
>gi|260782820|ref|XP_002586479.1| hypothetical protein BRAFLDRAFT_143759 [Branchiostoma floridae]
gi|229271592|gb|EEN42490.1| hypothetical protein BRAFLDRAFT_143759 [Branchiostoma floridae]
Length = 1889
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 8/98 (8%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIII 56
YF GWNIFD I+VT SLV+L E V GLSVLR RL SW T+ +L+SII
Sbjct: 777 KQYFTVGWNIFDSIIVTLSLVELGLEGVKGLSVLRSFRLLRVFKLAKSWPTLNLLISIIG 836
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+++GALGNLTF+L IV+YIFAVIGMQLF + YT+E F
Sbjct: 837 NSLGALGNLTFILGIVVYIFAVIGMQLFGEYYTAEAFG 874
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMT-----EFVDGLSVLRGLRL--------SWTTMKVL 51
YF W D I+V SLV L+ E V LR LR M+V+
Sbjct: 1225 KKYFTNAWCWLDFIIVMVSLVSLVAKIMGMENVSAFKSLRTLRALRPLRAISRAEGMRVV 1284
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++GN+ V +I IFA++G+QLF Y
Sbjct: 1285 VNALICAIPSIGNVLLVCLIFWLIFAIMGVQLFGGKY 1321
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW--------TTM 48
A YF GWNIFD +VV S L D++ ++ ++LR +R++
Sbjct: 1536 AFGFKYFSQGWNIFDCVVVVMSILGILLEDIIEKYFVSPTLLRVIRVARIGRILRLIKGA 1595
Query: 49 KVLLSIIIS---TIGALGNLTFVLVIVIYIFAVIGM 81
K + ++I S + AL N+ +L +V++I+A+ GM
Sbjct: 1596 KGIRTLIFSLAISAPALFNIGLLLFLVMFIYAIFGM 1631
>gi|241153636|ref|XP_002407119.1| skeletal muscle sodium channel alpha subunit, putative [Ixodes
scapularis]
gi|215494036|gb|EEC03677.1| skeletal muscle sodium channel alpha subunit, putative [Ixodes
scapularis]
Length = 2026
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 11/110 (10%)
Query: 1 MALS-NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S +YF+ GWNIFD ++V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 827 MAMSPKNYFREGWNIFDFLIVALSLIELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLL 886
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+Y KF + VP
Sbjct: 887 ISIMGKTIGALGNLTFVLGIIIFIFAVMGMQLFGKNYEENKHKFKENMVP 936
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLM-TEFVDG----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V S+++L+ T F G L LR LR + M+V+++
Sbjct: 1335 YFTNAWCWLDFVIVLVSVINLVATAFGAGRIQAFKTMRTLRALRPLRALSRFQGMRVVVN 1394
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I A+ N+ V +I IF+++G+Q+ + +
Sbjct: 1395 ALVQAIPAIFNVLLVCLIFWLIFSIMGVQMLAGKF 1429
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLM-TEFVDG--------------LSVLRGL 41
AL YF+ WN+FD +VV S L DL+ T FV L +++G
Sbjct: 1646 ALRWHYFKEPWNMFDFVVVILSILGTVLKDLIATYFVSPTLLRVVRVVKVGRVLRLVKGA 1705
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1706 R----GIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1744
>gi|307210096|gb|EFN86793.1| Sodium channel protein para [Harpegnathos saltator]
Length = 2055
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SLV+L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 843 YFQEGWNIFDFIIVVLSLVELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 902
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 903 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLP 945
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1674 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1733
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1734 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1772
>gi|242013090|ref|XP_002427248.1| sodium channel protein type 4 subunit alpha, putative [Pediculus
humanus corporis]
gi|212511581|gb|EEB14510.1| sodium channel protein type 4 subunit alpha, putative [Pediculus
humanus corporis]
Length = 1812
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 790 YFQEGWNIFDFIIVALSLLELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 849
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 850 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFMDKELP 892
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLL 52
+YF W D ++V SL++ + L LR LR M+V++
Sbjct: 1254 EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV 1313
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1314 NALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1349
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 16/89 (17%)
Query: 12 WNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW-----------TTMKVLLSII 55
WN+FD +VV S L D++ ++ ++LR +R++ ++ LL +
Sbjct: 1418 WNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFAL 1477
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ AL N+ +L +V++IFA+ GM F
Sbjct: 1478 AMSLPALFNICLLLFLVMFIFAIFGMSFF 1506
>gi|30350262|gb|AAP20106.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus]
Length = 2051
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 850 YFQEGWNIFDFIIVALSLLELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 909
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 910 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFMDKELP 952
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1647 ALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1706
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1707 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1745
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVL 51
+YF W D ++V SL++ + L LR LR M+V+
Sbjct: 1335 KEYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVV 1394
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1395 VNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1431
>gi|30350264|gb|AAP20107.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus
capitis]
Length = 2051
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 850 YFQEGWNIFDFIIVALSLLELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 909
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 910 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFMDKELP 952
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1647 ALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1706
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1707 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1745
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVL 51
+YF W D ++V SL++ + L LR LR M+V+
Sbjct: 1335 KEYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVV 1394
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1395 VNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1431
>gi|29467444|dbj|BAC67159.1| para-orthologous sodium channel alpha-subunit [Pediculus humanus
corporis]
Length = 2086
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 885 YFQEGWNIFDFIIVALSLLELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 944
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 945 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFMDKELP 987
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1682 ALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1741
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1742 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1780
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVL 51
+YF W D ++V SL++ + L LR LR M+V+
Sbjct: 1370 KEYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVV 1429
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1430 VNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1466
>gi|328712092|ref|XP_003244728.1| PREDICTED: sodium channel protein para-like isoform 1
[Acyrthosiphon pisum]
Length = 1160
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 9/102 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V S+V+L++ GLSVLR RL SW T+ +L
Sbjct: 851 MAMSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSVLRSFRLLRVFKLAKSWPTLNLL 910
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+YT + +
Sbjct: 911 ISIMGRTIGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEKMY 952
>gi|328712094|ref|XP_003244729.1| PREDICTED: sodium channel protein para-like isoform 2
[Acyrthosiphon pisum]
Length = 1149
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 9/102 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V S+V+L++ GLSVLR RL SW T+ +L
Sbjct: 840 MAMSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSVLRSFRLLRVFKLAKSWPTLNLL 899
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+YT + +
Sbjct: 900 ISIMGRTIGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEKMY 941
>gi|421919635|gb|AFX68800.1| voltage-gated sodium channel, partial [Hyalella azteca]
Length = 453
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 71/100 (71%), Gaps = 9/100 (9%)
Query: 1 MALSND-YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S YFQ GWNIFD +V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 281 MAMSPKFYFQEGWNIFDFFIVALSLIELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 340
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT +
Sbjct: 341 ISIMGKTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEK 380
>gi|315001924|emb|CBI71141.1| voltage gated sodium channel subunit 1 [Myzus persicae]
Length = 1149
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 9/102 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V S+V+L++ GLSVLR RL SW T+ +L
Sbjct: 840 MAMSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSVLRSFRLLRVFKLAKSWPTLNLL 899
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+YT + +
Sbjct: 900 ISIMGRTIGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEKMY 941
>gi|246372819|gb|ABL10360.2| voltage-gated sodium channel [Cancer borealis]
Length = 1989
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 10/101 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
Y Q GWNIFD I+V SL++L V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 806 YLQEGWNIFDFIIVFLSLLELGLANVSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 865
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPDP 97
+GALGNLTFVL I+I+IFAV+GMQLF K+YT + KF P+P
Sbjct: 866 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEKVMKFPPNP 906
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L+ G L LR LR M+V+++
Sbjct: 1294 YFTNAWCWLDFLIVMVSLINLVATLAGGGKIQAFKTMRTLRALRPLRALSRMQGMRVVVN 1353
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1354 ALVGAIPSIVNVLLVCLIFWLIFAIMGVQLFNGRY 1388
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN++D +VV S L D++ ++ ++LR +R++
Sbjct: 1604 ALRWHYFKEPWNLYDFVVVIMSILGMVLKDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1663
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V+YI A+ GM F
Sbjct: 1664 KGIRTLLFALAMSLPALFNICLLLFLVMYISAIYGMSFF 1702
>gi|4755118|gb|AAD23600.2| putative sodium channel [Rhipicephalus microplus]
Length = 1130
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWNIFD ++V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 1 YFREGWNIFDFLIVALSLIELSLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 60
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
IGALGNLTFVL I+I+IFAV+GMQLF K+Y + KF + VP
Sbjct: 61 IGALGNLTFVLGIIIFIFAVMGMQLFGKNYEESKHKFKDNMVP 103
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VV S L DL+ + L +++G
Sbjct: 834 ALRWHYFREPWNMFDFVVVILSILGTVLKDLIAAYFVSPTLLRVVRVVKVGRVLRLVKGA 893
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 894 R----GIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 932
>gi|47220627|emb|CAG06549.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1785
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II S+
Sbjct: 619 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGSS 678
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 679 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 708
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWT--------- 46
+AL +F GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1394 IALRQYFFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKG 1453
Query: 47 --TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1454 ARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1494
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D +V SL+ L + L LR LR LS + M+V+++
Sbjct: 1065 YFTNAWCWLDFFIVDISLISLSANLMGLSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1124
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1125 ALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1159
>gi|432098374|gb|ELK28174.1| Sodium channel protein type 9 subunit alpha [Myotis davidii]
Length = 1835
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L VDGLSVLR RL SW T+ +L+ II +
Sbjct: 755 EYFQVGWNIFDSIIVTLSLVELFLSDVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 814
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 815 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 847
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD ++V S+V DL+ ++ ++ R +RL+
Sbjct: 1415 SLRHYYFTVGWNIFDFVIVIISIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1474
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1475 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSSFA 1514
>gi|113676053|ref|NP_001038530.1| sodium channel protein type 4 subunit alpha B [Danio rerio]
gi|123891533|sp|Q20JQ7.1|SC4AB_DANRE RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|76786317|gb|ABA54920.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b [Danio
rerio]
Length = 1784
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 627 YFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 686
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K YT
Sbjct: 687 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYT 717
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1349 ALRYHYFSIGWNIFDFVVVILSILGIGLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGA 1408
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1409 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1448
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFMVISMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LADVMILTVFCLSVFALIGLQLF 271
>gi|84371420|gb|ABB29446.2| voltage-gated sodium channel Nav1.4b [Danio rerio]
gi|190339974|gb|AAI63558.1| Scn4ab protein [Danio rerio]
Length = 1783
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 627 YFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 686
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K YT
Sbjct: 687 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYT 717
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1348 ALRYHYFSIGWNIFDFVVVILSILGIGLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGA 1407
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1408 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1447
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFMVISMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LADVMILTVFCLSVFALIGLQLF 271
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1033 YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1092
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1093 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1127
>gi|62822245|gb|AAY14794.1| unknown [Homo sapiens]
Length = 1146
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 881
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD-----GLSVLRGLRLSWTT-----MKVLLSIIISTIGA 61
WN D +V+ + +TEFV+ L R LR T +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|170067719|ref|XP_001868593.1| voltage-dependent para-like sodium channel [Culex quinquefasciatus]
gi|167863813|gb|EDS27196.1| voltage-dependent para-like sodium channel [Culex quinquefasciatus]
Length = 773
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 8/96 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 672 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 731
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+GALGNLTFVL I+I+IFAV+GMQLF K+YT A
Sbjct: 732 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTGSVLA 767
>gi|431894869|gb|ELK04662.1| Sodium channel protein type 9 subunit alpha [Pteropus alecto]
Length = 1964
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L VDGLSVLR RL SW T+ +L+ II +
Sbjct: 800 EYFQVGWNIFDSLIVTLSLVELFLSDVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 859
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 860 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 892
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1543 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1602
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1603 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1643
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIRSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|395519681|ref|XP_003763971.1| PREDICTED: sodium channel protein type 9 subunit alpha [Sarcophilus
harrisii]
Length = 1988
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 803 EYFQVGWNIFDSVIVTLSLVELLLNDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 862
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 863 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 895
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1568 ISLRHYYFTIGWNIFDFVVVILSIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1627
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1628 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1668
>gi|311698073|gb|ADQ00331.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Pollimyrus adspersus]
Length = 967
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T +LL+II S+
Sbjct: 37 YFQVGWNVFDSIIVTMSMVEMLLADVEGLSVLRSFRLLRVFKLAKSWPTHNMLLTIIGSS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLFSK+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFSKNYK 127
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAAGLLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVVLVCLIFWLIFSIMGVNLFA 577
>gi|111792863|gb|ABH12275.1| putative voltage-gated sodium channel [Haplopelma schmidti]
Length = 1987
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 813 YFQEGWNIFDFIIVVLSLLELGLDGVSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 872
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y + F + +P
Sbjct: 873 MGALGNLTFVLGIIIFIFAVMGMQLFGKNYEENRCVFENNEIP 915
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V S+V+L+ + L LR LR + M+V+++
Sbjct: 1301 YFTNAWCWLDFVIVLVSVVNLVASLLGAGNIQAFKTMRTLRALRPLRALSRFQGMRVVVN 1360
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+++ I A+ N+ V +I IFA++G+ +F+ + S
Sbjct: 1361 VLVQAIPAIFNVLLVCLIFWLIFAIMGVNMFAGKFYS 1397
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VVT S L DL+ ++ L +++G
Sbjct: 1610 ALRMYYFKEPWNVFDFVVVTLSILGIVLKDLIAKYFVSPTLLRVVRVVKVGRVLRLVKGA 1669
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1670 R----GIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1708
>gi|345328068|ref|XP_001513667.2| PREDICTED: sodium channel protein type 9 subunit alpha
[Ornithorhynchus anatinus]
Length = 1982
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 800 EYFQVGWNIFDSVIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 859
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 860 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 890
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1566 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1625
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1626 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|359500285|gb|AEV53348.1| NaV1.7, partial [Heterocephalus glaber]
Length = 1884
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 782 EYFQVGWNIFDSLIVTLSLVELFLSHVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 841
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 842 SMGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 874
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1547 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1606
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1607 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1647
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 168 WNWLDFVVIVFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 224
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 225 LSDVMILTVFCLSVFALIGLQLF 247
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S+V L+ + L LR LR + M+V+++
Sbjct: 1233 YFTNAWCWLDFLIVDVSVVTLVASTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1292
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1293 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1327
>gi|432950658|ref|XP_004084549.1| PREDICTED: sodium channel protein type 4 subunit alpha B-like
[Oryzias latipes]
Length = 2509
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 1342 YFQVGWNIFDSIIVTMSLVELGLADVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 1401
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
IGALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 1402 IGALGNLTLVLAIIVFIFAVVGMQLFGKNY 1431
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 2084 IALRQHYFAVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRILRLIRG 2143
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 2144 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 2184
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFMVISMAY---LTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
LG++ + V + +FA+IG+QLF
Sbjct: 249 LGDVMVLTVFCLSVFALIGLQLF 271
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + MKV+++
Sbjct: 1769 YFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMKVVVN 1828
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1829 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1863
>gi|1110465|gb|AAB60247.1| sodium channel protein [Drosophila virilis]
Length = 706
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 317 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 376
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 377 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 417
>gi|1110468|gb|AAB60250.1| sodium channel protein [Drosophila virilis]
Length = 689
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 325 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 384
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 385 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 425
>gi|301786470|ref|XP_002928650.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1987
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 893
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1566 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1625
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1626 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
>gi|1110466|gb|AAB60248.1| sodium channel protein [Drosophila virilis]
Length = 701
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 325 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 384
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 385 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 425
>gi|1110467|gb|AAB60249.1| sodium channel protein [Drosophila virilis]
Length = 693
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 304 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 363
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 364 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 404
>gi|281345251|gb|EFB20835.1| hypothetical protein PANDA_018636 [Ailuropoda melanoleuca]
Length = 1987
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 802 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 861
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 862 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 894
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1566 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1625
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1626 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1253 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1312
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1313 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1347
>gi|1110464|gb|AAB60246.1| sodium channel protein [Drosophila virilis]
Length = 704
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 325 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 384
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 385 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 425
>gi|1110462|gb|AAB60244.1| sodium channel protein [Drosophila virilis]
Length = 714
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 325 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 384
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 385 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 425
>gi|301786468|ref|XP_002928649.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 1976
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 882
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|410925829|ref|XP_003976382.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Takifugu rubripes]
Length = 2774
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 771 YFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 830
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 831 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 860
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLS-----------W 45
AL +F WNIFD +V+ S+V DL+ ++ ++ R +RL+
Sbjct: 1507 ALRCYFFTIAWNIFDFVVIILSIVGIVLADLIEKYFVSPTLFRVIRLARIGRVLRLIRAA 1566
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1567 KGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFA 1606
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD-----GLSVLRGLRLSWTT-----MKVLLSIIISTIGA 61
WN D V+ + V TEFVD L R LR T +K ++ +I ++
Sbjct: 191 WNWLDFTVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVRK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D ++V SL+ L ++F + L LR LR LS + M+V+++
Sbjct: 1195 YFTNYWCWLDFLIVDVSLISLAANSLGYSDFTAIKSLRTLRALRPLRALSRFEGMRVVVN 1254
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1255 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1289
>gi|311698079|gb|ADQ00334.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Mormyrops anguilloides]
Length = 957
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT SLV++M V+GLSVLR RL SW T+ +LL II ++
Sbjct: 37 YFQVGWNVFDSIIVTMSLVEMMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLMIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYKD 128
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + DL+ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSVASMMVADLIEKYFVSPTLFRVVRLARIGRVLRLIKG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNTWCWLDFLIVDVSLVSLAANMMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|126326275|ref|XP_001367438.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Monodelphis domestica]
Length = 1978
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 792 EYFQVGWNIFDSVIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 851
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 852 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 884
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1557 ISLRHYYFTIGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1616
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1617 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1657
>gi|381413276|gb|AFG28555.1| voltage-gate sodium channel [Scylla paramamosain]
Length = 642
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 10/101 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
Y Q GWNIFD I+V SL++L V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 44 YLQEGWNIFDFIIVFLSLLELGLANVSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 103
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDP 97
+GALGNLTFVL I+I+IFAV+GMQLF K+YT F P+P
Sbjct: 104 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTENVMLFPPNP 144
>gi|334330211|ref|XP_003341318.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Monodelphis domestica]
Length = 1978
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 792 EYFQVGWNIFDSVIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 851
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 852 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 884
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1557 ISLRHYYFTIGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1616
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1617 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1657
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVICFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + + + +FA+IG+QLF
Sbjct: 245 LSDVMILTLFCLSVFALIGLQLF 267
>gi|348585905|ref|XP_003478711.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
3 [Cavia porcellus]
Length = 1976
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTVGWNIFDFVVVILSIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|444721579|gb|ELW62310.1| Sodium channel protein [Tupaia chinensis]
Length = 1734
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 648 EYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 707
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 708 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 740
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1314 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1373
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1374 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1414
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR + M+V+++
Sbjct: 1099 YFTNAWCWLDFLIVDVSLITLVASTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1158
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1159 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1193
>gi|348585901|ref|XP_003478709.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
1 [Cavia porcellus]
Length = 1975
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1554 ISLRHYYFTVGWNIFDFVVVILSIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1613
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1614 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1654
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1300 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1334
>gi|348585903|ref|XP_003478710.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
2 [Cavia porcellus]
Length = 1986
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTVGWNIFDFVVVILSIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|403258865|ref|XP_003921963.1| PREDICTED: sodium channel protein type 9 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1977
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|397507781|ref|XP_003824365.1| PREDICTED: sodium channel protein type 9 subunit alpha [Pan
paniscus]
Length = 1977
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|296204644|ref|XP_002749416.1| PREDICTED: sodium channel protein type 9 subunit alpha [Callithrix
jacchus]
Length = 1977
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADMIEKYFVSPTLFRVIRLARIGRILRLIKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|350593571|ref|XP_003133500.3| PREDICTED: sodium channel protein type 9 subunit alpha [Sus scrofa]
Length = 1706
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 525 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 584
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 585 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 617
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1290 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1349
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1350 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1390
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 976 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1035
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1036 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1070
>gi|440895234|gb|ELR47486.1| Sodium channel protein type 9 subunit alpha [Bos grunniens mutus]
Length = 1995
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 802 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 861
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 894
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1580 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1639
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1640 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1674
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
>gi|160707935|ref|NP_001104257.1| sodium channel protein type 9 subunit alpha [Bos taurus]
Length = 1987
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1572 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1631
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1632 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|426220959|ref|XP_004004679.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Ovis aries]
Length = 1987
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1572 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1631
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1632 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|296490574|tpg|DAA32687.1| TPA: sodium channel, voltage-gated, type IX, alpha subunit [Bos
taurus]
Length = 1987
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1572 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1631
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1632 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
>gi|426220963|ref|XP_004004681.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Ovis aries]
Length = 1976
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1561 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1620
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1621 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|4506813|ref|NP_002968.1| sodium channel protein type 9 subunit alpha [Homo sapiens]
gi|758110|emb|CAA58042.1| sodium channel alpha subunit [Homo sapiens]
gi|114150659|gb|ABI51981.1| voltage-gated sodium channel Nav1.7 [Homo sapiens]
Length = 1977
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|122066139|sp|Q62205.2|SCN9A_MOUSE RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Peripheral sodium channel 1; Short=PN1; AltName:
Full=Sodium channel protein type IX subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.7
Length = 1984
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F D
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKD 279
>gi|338715743|ref|XP_003363320.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1986
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1565 VSLRHYYFTVGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|354487346|ref|XP_003505834.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Cricetulus griseus]
Length = 1974
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1553 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1612
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1613 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1653
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1239 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1298
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1299 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1333
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F +
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKE 279
>gi|297264211|ref|XP_001101662.2| PREDICTED: sodium channel protein type 9 subunit alpha [Macaca
mulatta]
Length = 1977
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1562 YFTIGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRT 1621
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1622 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|253910951|gb|ACT36716.1| skeletal muscle voltage-gated sodium channel [Thamnophis atratus]
Length = 1875
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1212
>gi|219521476|gb|AAI72147.1| Scn9a protein [Mus musculus]
Length = 1984
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F D
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKD 279
>gi|187957230|gb|AAI58049.1| Scn9a protein [Mus musculus]
Length = 1973
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1554 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1613
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1614 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1654
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F D
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKD 279
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1300 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1334
>gi|125630309|ref|NP_061340.2| sodium channel protein type 9 subunit alpha [Mus musculus]
gi|225000612|gb|AAI72761.1| sodium channel, voltage-gated, type IX, alpha [synthetic construct]
Length = 1975
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 792 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 851
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 852 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 884
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F D
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKD 279
>gi|354487344|ref|XP_003505833.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Cricetulus griseus]
Length = 1974
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1553 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1612
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1613 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1653
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F +
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKE 279
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1239 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1298
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1299 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1333
>gi|338715746|ref|XP_003363321.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1975
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1554 VSLRHYYFTVGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1613
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1614 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1654
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1300 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1334
>gi|426220961|ref|XP_004004680.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Ovis aries]
Length = 1976
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1561 YFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1620
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1621 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|410968779|ref|XP_003990877.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 9
subunit alpha [Felis catus]
Length = 1979
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 793 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 852
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 853 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 885
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1558 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1617
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1618 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1658
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1244 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1304 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1338
>gi|410035831|ref|XP_003309333.2| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Pan troglodytes]
Length = 2010
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 820 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 879
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 912
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1589 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1648
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1689
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LSDVMILTVFCLSVFALIGLQLF 272
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1275 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1334
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1335 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1369
>gi|327478559|sp|Q15858.3|SCN9A_HUMAN RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Neuroendocrine sodium channel; Short=hNE-Na;
AltName: Full=Peripheral sodium channel 1; Short=PN1;
AltName: Full=Sodium channel protein type IX subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.7
Length = 1988
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 802 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 861
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 894
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1567 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1626
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1627 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1667
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1253 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1312
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1313 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1347
>gi|441648954|ref|XP_003266243.2| PREDICTED: sodium channel protein type 9 subunit alpha [Nomascus
leucogenys]
Length = 2001
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 815 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 874
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 907
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1580 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1639
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1640 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1680
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|354487348|ref|XP_003505835.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Cricetulus griseus]
Length = 1985
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 802 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 861
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 894
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1564 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1623
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1624 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
L ++ + V + +FA+IG+QLF + + F +
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKE 279
>gi|327275592|ref|XP_003222557.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Anolis
carolinensis]
Length = 1871
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 663 EYFQVGWNIFDSIIVTLSLVELALANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 722
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 723 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 753
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1425 IALRYYFFTVGWNIFDFVVVILSIAGLVLSDLIEKYFVSPTLFRVIRLARIGRVLRLIRG 1484
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1485 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1525
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1109 YFTNAWCWLDFLIVDVSLISLTANWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1168
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1169 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1203
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAY---LTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLAVFALIGLQLF 269
>gi|60265594|gb|AAW68224.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVSKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1212
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
>gi|359323897|ref|XP_003640221.1| PREDICTED: sodium channel protein type 9 subunit alpha-like [Canis
lupus familiaris]
Length = 1975
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|253910955|gb|ACT36718.1| skeletal muscle voltage-gated sodium channel [Thamnophis couchii]
Length = 1875
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1212
>gi|60265592|gb|AAW68222.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFV--------DGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L ++ L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWIGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1212
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
>gi|355750587|gb|EHH54914.1| hypothetical protein EGM_04021 [Macaca fascicularis]
Length = 1989
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 804 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 863
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 896
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1574 YFTIGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRT 1633
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1634 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1668
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1255 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1314
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1315 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1349
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFV+ S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFVVIVFAFV---TEFVNLGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|338715741|ref|XP_003363319.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1999
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 814 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 873
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 874 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 906
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1578 VSLRHYYFTVGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1637
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1638 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1264 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1323
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1358
>gi|60265593|gb|AAW68223.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1212
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
>gi|355564940|gb|EHH21429.1| hypothetical protein EGK_04495 [Macaca mulatta]
Length = 1989
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 804 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 863
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 896
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1574 YFTIGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRT 1633
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1634 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1668
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1255 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1314
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1315 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1349
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFVVIVFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|253910953|gb|ACT36717.1| skeletal muscle voltage-gated sodium channel [Thamnophis elegans]
Length = 1875
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVVGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1212
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
>gi|402888535|ref|XP_003907613.1| PREDICTED: sodium channel protein type 9 subunit alpha [Papio
anubis]
Length = 1985
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 799 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 858
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 891
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V DL+ + ++ R +RL+ ++
Sbjct: 1570 YFTIGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRT 1629
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1630 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
>gi|149730681|ref|XP_001496473.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Equus caballus]
Length = 1975
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 790 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 849
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 850 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 882
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1554 VSLRHYYFTVGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKG 1613
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1614 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1654
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1300 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1334
>gi|395732433|ref|XP_002812596.2| PREDICTED: sodium channel protein type 9 subunit alpha [Pongo
abelii]
Length = 2056
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 815 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 874
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 907
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1580 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 1639
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1640 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1680
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFVVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|320542164|ref|NP_001188619.1| paralytic, isoform X [Drosophila melanogaster]
gi|318069409|gb|ADV37701.1| paralytic, isoform X [Drosophila melanogaster]
Length = 2125
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 922 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 962
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1356 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1415
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1416 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1450
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1666 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1725
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1726 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1764
>gi|426337576|ref|XP_004032777.1| PREDICTED: sodium channel protein type 9 subunit alpha-like,
partial [Gorilla gorilla gorilla]
Length = 1522
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 733 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 792
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 793 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 825
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1184 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1243
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1244 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1278
>gi|320542136|ref|NP_001188605.1| paralytic, isoform J [Drosophila melanogaster]
gi|318069395|gb|ADV37687.1| paralytic, isoform J [Drosophila melanogaster]
Length = 2100
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 922 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 962
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
>gi|119631719|gb|EAX11314.1| sodium channel, voltage-gated, type IX, alpha, isoform CRA_a [Homo
sapiens]
gi|119631721|gb|EAX11316.1| sodium channel, voltage-gated, type IX, alpha, isoform CRA_a [Homo
sapiens]
Length = 1339
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 154 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 213
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 214 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 246
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 918 ISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKG 977
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 978 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1018
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 605 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 664
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 665 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 699
>gi|123913390|sp|Q2XVR5.2|SC4AA_TETNG RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|84310205|gb|ABB29443.2| voltage-gated sodium channel Nav1.4a [Tetraodon nigroviridis]
Length = 1863
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II S+
Sbjct: 651 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGSS 710
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 711 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 740
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1425 IALRQYFFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKG 1484
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1485 ARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1525
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 1111 YFTNAWCWLDFFIVDISLISLSANLMGLSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1170
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1171 ALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1205
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 183 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 239
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ ++ +FA++G+QLF
Sbjct: 240 MVDVMILTVFALSVFALVGLQLF 262
>gi|344268020|ref|XP_003405862.1| PREDICTED: sodium channel protein type 9 subunit alpha [Loxodonta
africana]
Length = 1974
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1556 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1615
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1616 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1656
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + MKV+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMKVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|320542172|ref|NP_001188623.1| paralytic, isoform AB [Drosophila melanogaster]
gi|318069413|gb|ADV37705.1| paralytic, isoform AB [Drosophila melanogaster]
Length = 2086
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 898 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 938
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1317 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1376
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1377 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1411
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1627 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1686
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1687 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1725
>gi|320542128|ref|NP_001188601.1| paralytic, isoform F [Drosophila melanogaster]
gi|318069391|gb|ADV37683.1| paralytic, isoform F [Drosophila melanogaster]
Length = 2108
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 930 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 970
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1339 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1398
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1399 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1433
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1649 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1708
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1709 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1747
>gi|320542166|ref|NP_001188620.1| paralytic, isoform Y [Drosophila melanogaster]
gi|318069410|gb|ADV37702.1| paralytic, isoform Y [Drosophila melanogaster]
Length = 2138
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 922 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 962
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1369 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1428
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1429 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1463
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1679 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1738
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1739 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1777
>gi|320542152|ref|NP_001188613.1| paralytic, isoform R [Drosophila melanogaster]
gi|318069403|gb|ADV37695.1| paralytic, isoform R [Drosophila melanogaster]
Length = 2079
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 841 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 900
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 901 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 941
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1310 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1369
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1370 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1404
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1620 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1679
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1680 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1718
>gi|343098404|tpg|DAA34933.1| TPA_inf: voltage-dependent sodium channel SCN4A [Anolis
carolinensis]
Length = 1843
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 622 EYFQVGWNIFDSIIVTLSLVELALANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 681
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 682 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 712
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1397 IALRYYFFTVGWNIFDFVVVILSIAGLVLSDLIEKYFVSPTLFRVIRLARIGRVLRLIRG 1456
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1457 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1497
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1070 YFTNAWCWLDFLIVDVSLISLTANWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1129
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1130 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1164
>gi|320542140|ref|NP_001188607.1| paralytic, isoform L [Drosophila melanogaster]
gi|318069397|gb|ADV37689.1| paralytic, isoform L [Drosophila melanogaster]
Length = 2087
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 909 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 949
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1318 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1377
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1378 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1412
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1628 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1687
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1688 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1726
>gi|320542222|ref|NP_001188648.1| paralytic, isoform BA [Drosophila melanogaster]
gi|318069438|gb|ADV37730.1| paralytic, isoform BA [Drosophila melanogaster]
Length = 2132
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 919 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 959
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1363 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1422
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1423 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1457
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1673 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1732
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1733 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1771
>gi|320542154|ref|NP_001188614.1| paralytic, isoform S [Drosophila melanogaster]
gi|318069404|gb|ADV37696.1| paralytic, isoform S [Drosophila melanogaster]
Length = 2100
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 909 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 949
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
>gi|320542168|ref|NP_001188621.1| paralytic, isoform Z [Drosophila melanogaster]
gi|318069411|gb|ADV37703.1| paralytic, isoform Z [Drosophila melanogaster]
Length = 2089
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 898 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 938
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1320 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1379
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1380 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1414
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1630 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1689
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1690 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1728
>gi|116007172|ref|NP_001036281.1| paralytic, isoform C [Drosophila melanogaster]
gi|113193613|gb|ABI30986.1| paralytic, isoform C [Drosophila melanogaster]
Length = 2131
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 930 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 970
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|221329977|ref|NP_001138205.1| paralytic, isoform D [Drosophila melanogaster]
gi|220901794|gb|ACL82937.1| paralytic, isoform D [Drosophila melanogaster]
Length = 2114
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 851 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 910
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 911 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 951
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1345 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1404
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1405 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1439
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1655 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1714
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1715 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1753
>gi|320542138|ref|NP_001188606.1| paralytic, isoform K [Drosophila melanogaster]
gi|318069396|gb|ADV37688.1| paralytic, isoform K [Drosophila melanogaster]
Length = 2076
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 898 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 938
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1307 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|18959222|ref|NP_579823.1| sodium channel protein type 9 subunit alpha [Rattus norvegicus]
gi|55976160|sp|O08562.1|SCN9A_RAT RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Peripheral sodium channel 1; Short=PN1; AltName:
Full=Sodium channel protein type IX subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.7
gi|1906594|gb|AAB50403.1| PN1 [Rattus norvegicus]
gi|2501838|gb|AAB80701.1| voltage-gated sodium channel [Rattus norvegicus]
Length = 1984
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SL++L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 801 EYFQVGWNIFDSLIVTLSLIELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 860
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|60265591|gb|AAW68221.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 673 EYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 732
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 733 SVGALGNLTLVLAIIVFIFAVMGMQLFGKNY 763
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1434 IALRHYFFTNGWNIFDFVVVILSIVGLVLSDIIEKYFVSPTLFRVIRLARIGRALRLIRG 1493
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1494 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1118 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1177
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1178 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1212
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLAVFALIGLQLF 270
>gi|170044273|ref|XP_001849778.1| sodium channel protein [Culex quinquefasciatus]
gi|167867489|gb|EDS30872.1| sodium channel protein [Culex quinquefasciatus]
Length = 544
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 168 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 227
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT+E
Sbjct: 228 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTAE 260
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 37 VLRGLRL--SWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EK 92
VLR +L SW T+ +L+SI+ T+GALGNLTFV I+++IFAV+GMQLF K+Y ++
Sbjct: 290 VLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVFCIIVFIFAVMGMQLFGKNYIDNVDR 349
Query: 93 FAPDPVP 99
F +P
Sbjct: 350 FPDKDLP 356
>gi|185133421|ref|NP_001118204.1| sodium channel protein type 4 subunit alpha A [Oncorhynchus mykiss]
gi|145933716|gb|ABP98938.1| voltage-gated sodium channel alpha type IV [Oncorhynchus mykiss]
Length = 1903
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 689 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 748
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 749 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 780
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+ L +F GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1455 IGLRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRG 1514
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1515 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1555
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
YF+ WN D +V++ + +TEFVD +S LR R+ +K ++ +I
Sbjct: 187 YFRDPWNWLDFMVISMAY---LTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALI 243
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA++G+QLF
Sbjct: 244 QSVKKLADVMILTVFCLAVFALVGLQLF 271
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1141 YFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1200
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPD 96
++ I ++ N+ V +I IF+++G+ +F+ Y + E+F+ D
Sbjct: 1201 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNMFAGKYYYCFNTTSEERFSAD 1250
>gi|327277934|ref|XP_003223718.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Anolis
carolinensis]
Length = 1963
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L +DGLSVLR RL SW T+ +L+ II ++
Sbjct: 792 YFQVGWNIFDSIIVSLSLMELGLSNIDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 851
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K Y + K
Sbjct: 852 VGALGNLTLVLAIIVFIFAVVGMQLFGKQYEACK 885
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S + +L+ ++ ++ R +RL+
Sbjct: 1545 IALRYYYFTIGWNIFDFVVVILSFIGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKG 1604
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1605 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSQFA 1645
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S+V L+ +D L LR LR + MKV+++
Sbjct: 1234 YFTNAWCWLDFLIVDVSIVSLIANALDYAELGPIKSLRTLRALRPLRALSRFEGMKVVVN 1293
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
+I I ++ N+ V +I IF+++G+ LF+
Sbjct: 1294 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1325
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFLVISFAYI---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
>gi|229442353|gb|AAI72823.1| sodium channel, voltage-gated, type III, alpha [synthetic
construct]
Length = 465
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 337 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 396
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 397 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 426
>gi|301606946|ref|XP_002933087.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1797
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 673 YFQVGWNIFDSIIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 732
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 733 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 764
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V DL+ E+ ++ R +RL+
Sbjct: 1386 ALRYYFFTIGWNIFDFVVVILSIVGIVLSDLIAEYFVSPTLFRVIRLARIGRVLRLIRGA 1445
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1446 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1485
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 1072 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1131
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ Y TSE F D V
Sbjct: 1132 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTSELFEIDVV 1183
>gi|345324476|ref|XP_003430822.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Ornithorhynchus anatinus]
Length = 1726
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 698 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 757
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 758 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 787
>gi|119631720|gb|EAX11315.1| sodium channel, voltage-gated, type IX, alpha, isoform CRA_b [Homo
sapiens]
Length = 835
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 154 EYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 213
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 214 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 246
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 605 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 664
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 665 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 699
>gi|426239135|ref|XP_004013482.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Ovis aries]
Length = 1833
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 618 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 677
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 678 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 710
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1395 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1454
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1455 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1495
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|123898107|sp|Q2XVR4.1|SC4AB_TETNG RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|78172676|gb|ABB29444.1| voltage-gated sodium channel Nav1.4b [Tetraodon nigroviridis]
Length = 1715
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 574 YFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 633
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 634 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 663
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWN+FD +VV S L D++ ++ ++ R +RL+
Sbjct: 1290 IALRRHYFSIGWNVFDFVVVILSILGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1349
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1350 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1390
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 975 YFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1034
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ + ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1035 ALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 1070
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + +TE VD +SVLR R+ +K ++ +I ++
Sbjct: 188 WNWLDFMVISMAY---LTELVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L + + V + +FA+IG+QLF
Sbjct: 245 LADAMVLTVFCLSVFALIGLQLF 267
>gi|343098410|tpg|DAA34936.1| TPA_inf: voltage-dependent sodium channel SCN7A/9A-like protein
[Anolis carolinensis]
Length = 1886
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L +DGLSVLR RL SW T+ +L+ II ++
Sbjct: 735 YFQVGWNIFDSIIVSLSLMELGLSNIDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 794
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K Y + K
Sbjct: 795 VGALGNLTLVLAIIVFIFAVVGMQLFGKQYEACK 828
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S + +L+ ++ ++ R +RL+
Sbjct: 1468 IALRYYYFTIGWNIFDFVVVILSFIGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKG 1527
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1528 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSQFA 1568
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S+V L+ +D L LR LR + MKV+++
Sbjct: 1157 YFTNAWCWLDFLIVDVSIVSLIANALDYAELGPIKSLRTLRALRPLRALSRFEGMKVVVN 1216
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
+I I ++ N+ V +I IF+++G+ LF+
Sbjct: 1217 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1248
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 163 WNWLDFLVISFAYI---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 219
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 220 LSDVMILTVFCLSVFALIGLQLF 242
>gi|281351654|gb|EFB27238.1| hypothetical protein PANDA_013931 [Ailuropoda melanoleuca]
Length = 1833
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 628 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 687
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 688 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 720
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1401 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1460
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1461 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1501
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1081 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1140
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1141 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1187
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 203 WNWLDFSVITMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 259
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 260 LSDVMILTVFCLSVFALVGLQLF 282
>gi|82612143|gb|ABB84813.1| sodium channel 6 [Gnathonemus petersii]
Length = 799
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 69/92 (75%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T+ +LL+II ++
Sbjct: 32 YFQVGWNVFDSIIVTMSMVEMVLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLTIIGNS 91
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 92 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYKD 123
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 481 YFTNAWCWLDFLIVDVSLVSLAASIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 540
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 541 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 572
>gi|358417501|ref|XP_003583660.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Bos
taurus]
gi|359077058|ref|XP_003587508.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Bos
taurus]
Length = 1834
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1402 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1461
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1462 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1502
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1089 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1148
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1149 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1195
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|81394314|gb|AAK55437.2| Nav1.4b [Sternopygus macrurus]
Length = 1829
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 661 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 720
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 721 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 750
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S L D++ ++ ++ R +RL+
Sbjct: 1398 IALRQYFFSIGWNVFDFIVVILSIAGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1457
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 1458 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF 1497
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 243 WNWLDFMVISMAYT---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 299
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
LG++ + V + +FA+IG+QLF
Sbjct: 300 LGDVMILTVFCLSVFALIGLQLF 322
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1084 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1143
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1144 ALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 1178
>gi|311698061|gb|ADQ00325.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Gnathonemus petersii]
Length = 967
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T+ +LL+II ++
Sbjct: 37 YFQVGWNVFDSIIVTMSMVEMVLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLTIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYK 127
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + DL+ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSVASMLVADLIEKYFVSPTLFRVVRLARIGRVLRLIRG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAASIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|297701530|ref|XP_002827758.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pongo
abelii]
Length = 1834
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 634 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 693
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 694 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 726
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1403 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1462
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1463 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1503
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1090 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1149
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1150 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1196
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|301778289|ref|XP_002924556.1| PREDICTED: sodium channel protein type 4 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 1816
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 618 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 677
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 678 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 710
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1384 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1443
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1444 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1484
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1071 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1130
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1131 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1177
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|440890855|gb|ELR44938.1| Sodium channel protein type 4 subunit alpha, partial [Bos grunniens
mutus]
Length = 2019
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 851 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 910
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 911 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 943
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1622 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1681
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1682 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1722
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1310 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1369
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1370 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1416
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 217 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 273
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 274 LSDVMILTVFCLSVFALVGLQLF 296
>gi|334330203|ref|XP_003341315.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2005
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K APD
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPD 926
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|126326271|ref|XP_001367386.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Monodelphis domestica]
Length = 1994
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K APD
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPD 915
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|93587342|ref|NP_000325.4| sodium channel protein type 4 subunit alpha [Homo sapiens]
gi|292495096|sp|P35499.4|SCN4A_HUMAN RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=SkM1; AltName: Full=Sodium channel protein skeletal
muscle subunit alpha; AltName: Full=Sodium channel
protein type IV subunit alpha; AltName:
Full=Voltage-gated sodium channel subunit alpha Nav1.4
gi|225000136|gb|AAI72375.1| Sodium channel, voltage-gated, type IV, alpha subunit [synthetic
construct]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|243989|gb|AAB21221.1| sodium channel alpha subunit [human, skeletal muscle, Peptide, 1836
aa]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|395844926|ref|XP_003795199.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Otolemur garnettii]
Length = 1976
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + +TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAY---LTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
>gi|395844922|ref|XP_003795197.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Otolemur garnettii]
Length = 1976
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 791 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 850
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 851 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LSDVMILTVFCLSVFALIGLQLF 267
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1241 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1300
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1301 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1335
>gi|426347189|ref|XP_004041241.1| PREDICTED: sodium channel protein type 4 subunit alpha [Gorilla
gorilla gorilla]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|73965379|ref|XP_853396.1| PREDICTED: sodium channel protein type 4 subunit alpha [Canis lupus
familiaris]
Length = 1837
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|395844934|ref|XP_003795203.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 7
[Otolemur garnettii]
Length = 1908
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 753 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 812
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 813 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 845
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1203 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1262
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1263 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1297
>gi|351704425|gb|EHB07344.1| Sodium channel protein type 4 subunit alpha [Heterocephalus glaber]
Length = 1833
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 614 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 673
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 674 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 706
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1402 ALRQYYFTIGWNIFDFVVVILSIVGLALSELIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1461
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1462 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1501
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1073 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1132
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1133 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTSERF 1179
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 185 WNWLDFSVI---LMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 241
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 242 LSDVMILTVFCLSVFALVGLQLF 264
>gi|291406371|ref|XP_002719526.1| PREDICTED: sodium channel, voltage-gated, type IV, alpha-like
[Oryctolagus cuniculus]
Length = 1826
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 619 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 678
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 679 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 711
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1392 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1451
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1452 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1492
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1079 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1138
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1139 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1185
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAY---LTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|149022142|gb|EDL79036.1| rCG27299 [Rattus norvegicus]
Length = 1352
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SL++L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 672 EYFQVGWNIFDSLIVTLSLIELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 731
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 732 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 764
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1122 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1181
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1182 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1216
>gi|119614632|gb|EAW94226.1| sodium channel, voltage-gated, type IV, alpha, isoform CRA_b [Homo
sapiens]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|292487|gb|AAB59624.1| skeletal muscle sodium channel alpha subunit [Homo sapiens]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVK 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 PLLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|334330205|ref|XP_003341316.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Monodelphis domestica]
Length = 1977
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K APD
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPD 898
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|31788956|gb|AAO83647.1| skeletal muscle voltage-dependent sodium channel type IV alpha
subunit [Homo sapiens]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|311266955|ref|XP_003131332.1| PREDICTED: sodium channel protein type 4 subunit alpha [Sus scrofa]
Length = 1830
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 624 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 683
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 684 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 716
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1396 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1455
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1456 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1496
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1083 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1142
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1143 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1189
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|119614631|gb|EAW94225.1| sodium channel, voltage-gated, type IV, alpha, isoform CRA_a [Homo
sapiens]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|908809|gb|AAA75557.1| sodium channel alpha subunit [Homo sapiens]
Length = 1835
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1404 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1463
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1464 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1504
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|338213|gb|AAA60554.1| sodium channel alpha subunit [Homo sapiens]
Length = 1836
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|395844924|ref|XP_003795198.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Otolemur garnettii]
Length = 1992
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 807 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 866
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 867 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 899
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1571 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1630
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1631 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1671
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1317 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1351
>gi|311698059|gb|ADQ00324.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Campylomormyrus numenius]
Length = 967
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T+ +LL+II ++
Sbjct: 37 YFQVGWNVFDSIIVTMSMVEMVLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLTIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYK 127
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + DL+ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSVASMLVADLIEKYFVSPTLFRVVRLARIGRVLRLIRG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAASIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|410981514|ref|XP_003997113.1| PREDICTED: sodium channel protein type 4 subunit alpha [Felis
catus]
Length = 1834
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1402 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1461
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1462 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1502
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1089 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1148
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1149 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1195
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|397480255|ref|XP_003811402.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pan
paniscus]
Length = 1836
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1405 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1464
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1505
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|395844932|ref|XP_003795202.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 6
[Otolemur garnettii]
Length = 1964
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 779 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 838
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 839 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 871
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1543 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1602
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1603 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1643
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1229 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1288
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1289 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1323
>gi|395844930|ref|XP_003795201.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 5
[Otolemur garnettii]
Length = 1920
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 753 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 812
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 813 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 845
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1499 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1558
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1559 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1599
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1203 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1262
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1263 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1297
>gi|334330207|ref|XP_003341317.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Monodelphis domestica]
Length = 1953
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 775 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 834
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K APD
Sbjct: 835 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPD 874
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1541 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1600
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1227 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1287 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1321
>gi|260782826|ref|XP_002586482.1| hypothetical protein BRAFLDRAFT_249620 [Branchiostoma floridae]
gi|229271595|gb|EEN42493.1| hypothetical protein BRAFLDRAFT_249620 [Branchiostoma floridae]
Length = 1715
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF GWN FD I+V SL +L E V GLSVLR RL SW T+ +L+SII S+
Sbjct: 622 YFSSGWNCFDAIIVILSLAELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIIGSS 681
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
IGALGNLTF+L IV+YIFAVIGMQLF +Y
Sbjct: 682 IGALGNLTFILGIVVYIFAVIGMQLFGAEYEKR 714
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFV--DGLSVLRGLRL-----------SWTTMKVL 51
YF W D ++V SL+ + E + LS R +R M+V+
Sbjct: 1062 RKYFTNAWCWLDFVIVMISLLGIGAEALGLSNLSAFRSMRTLRALRPLRAISRAEGMRVV 1121
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V ++ IFA++G+QLF +
Sbjct: 1122 VNALVKAIPSIMNVLMVCLVFWLIFAIMGVQLFGGQF 1158
>gi|348531852|ref|XP_003453422.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Oreochromis niloticus]
Length = 1850
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 630 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 689
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 690 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 719
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1397 ALRQYYFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1456
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L + ++IF++ GM F+
Sbjct: 1457 KGIRTLLFALMMSLPALFNIGLLLFLNMFIFSIFGMSNFA 1496
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K +++ +I ++
Sbjct: 157 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 213
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
+G++ + V + +FA++G+QLF
Sbjct: 214 MGDVMILTVFALAVFALVGLQLF 236
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D +V SL+ L+ + + L LR LR + M+V+++
Sbjct: 1083 FFTNAWCWLDFFIVDISLISLVANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1142
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + TSE+ P
Sbjct: 1143 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTSEELFP 1190
>gi|332848894|ref|XP_003315741.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pan
troglodytes]
Length = 1697
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 499 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 558
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 559 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 591
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1266 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1325
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1326 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1366
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|326922809|ref|XP_003207637.1| PREDICTED: sodium channel protein type 2 subunit alpha-like,
partial [Meleagris gallopavo]
Length = 1030
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L VDGLSVLR RL SW T+ +L+ II ++
Sbjct: 724 YFQVGWNIFDSFIVTLSLVELFLANVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 783
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 784 VGALGNLTLVLAIIVFIFAVVGMQLFGKYYKE 815
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 6 DYFQC---GWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLL 52
D F C WN D +V++ + V TEFVD +S LR R+ +K ++
Sbjct: 184 DDFTCLRDPWNWLDFVVISFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIV 240
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+I ++ L ++ + V + +FA+IG+QLF
Sbjct: 241 GALIQSVKKLSDVMILTVFCLSVFALIGLQLF 272
>gi|123916267|sp|Q2XVR6.1|SC4AB_FUGRU RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|78172672|gb|ABB29442.1| voltage-gated sodium channel Nav1.4b [Takifugu rubripes]
Length = 1719
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 572 YFQVGWNIFDSIIVTISLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 631
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 632 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 661
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1294 IALRRHYFSIGWNIFDFVVVILSILGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 1353
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1354 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1394
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 979 YFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1038
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ + ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1039 ALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 1074
>gi|109116864|ref|XP_001116451.1| PREDICTED: sodium channel protein type 4 subunit alpha [Macaca
mulatta]
Length = 1837
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 637 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 696
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 697 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 728
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1406 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1465
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1466 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1506
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1093 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1152
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1153 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1199
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|395844928|ref|XP_003795200.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 4
[Otolemur garnettii]
Length = 1938
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD ++VT SLV+ V+GLSVLR RL SW T+ +L+ II +
Sbjct: 753 EYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 812
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 813 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 845
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S L L+ ++ ++ R +RL+
Sbjct: 1517 ISLRHYYFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKG 1576
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1577 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1617
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFIVIVFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1203 YFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1262
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1263 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1297
>gi|348560351|ref|XP_003465977.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha-like [Cavia porcellus]
Length = 1830
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 622 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 681
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 682 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 714
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1396 ALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1455
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1456 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1495
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1082 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1141
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1142 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERF 1188
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFSVI---LMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 249 LSDVMILTVFCLSVFALVGLQLF 271
>gi|403303789|ref|XP_003942505.1| PREDICTED: sodium channel protein type 4 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1835
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1404 LALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1463
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1464 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1504
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1091 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1150
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1151 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1197
>gi|363736225|ref|XP_422021.3| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1993
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L VDGLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQVGWNIFDSFIVTLSLVELFLANVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKYYKE 911
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLVDL-----MTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V + + ++ ++ R +RL+ ++
Sbjct: 1581 YFTVGWNIFDFVVVILSIVGMFLAKVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1640
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1641 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1675
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 6 DYFQC---GWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLL 52
D F C WN D +V++ + V TEFVD +S LR R+ +K ++
Sbjct: 184 DDFTCLRDPWNWLDFVVISFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIV 240
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+I ++ L ++ + V + +FA+IG+QLF
Sbjct: 241 GALIQSVKKLSDVMILTVFCLSVFALIGLQLF 272
>gi|355767540|gb|EHH62629.1| hypothetical protein EGM_21028 [Macaca fascicularis]
Length = 1835
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 727
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1404 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1463
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1464 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1504
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|355568831|gb|EHH25112.1| hypothetical protein EGK_08874 [Macaca mulatta]
Length = 1834
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 727
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1404 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1463
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1464 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1504
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1092 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1151
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1152 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1198
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|443688724|gb|ELT91324.1| hypothetical protein CAPTEDRAFT_134859, partial [Capitella teleta]
Length = 1694
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 75/113 (66%), Gaps = 14/113 (12%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE---------FVDGLSVLRGLRL-----SWT 46
+ALS YF+ GWN+FDL +V ++ D++ + ++ +LR LR+ +W
Sbjct: 697 LALSKLYFKSGWNVFDLFIVIITIADILIDISGANQDLSYLKSFRLLRLLRVFKLAQTWK 756
Query: 47 TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
TM++LLSII+ST+ ALGNLTF+L I+IYIFAVIGM+LF + Y EKFA P
Sbjct: 757 TMRLLLSIILSTMSALGNLTFILGIIIYIFAVIGMELFRESYIPEKFASGEKP 809
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 20/96 (20%)
Query: 7 YFQCGWNIFDLIVV------------------TASLVDLMTEFVDGLSVLRGLRLSWTTM 48
Y + WN+FDLIVV T SL+ ++ F G VLR ++ +
Sbjct: 1357 YLRRPWNVFDLIVVILSVIGVILDDILSNVFVTPSLLRVVRIFRIG-RVLRLIKAAKGIR 1415
Query: 49 KVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
K+L +++IS + AL N+ +L +V++I+A+ GM +F
Sbjct: 1416 KLLFALVIS-LPALFNIAMLLFLVVFIYAIFGMTIF 1450
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLRL--------SWTTMKVLLS 53
YF W I D I+V S+ L + +D LR LR W MK++++
Sbjct: 1036 YFTTFWTILDFIIVVISISSLAADSAGQGDLDSFKALRTLRAFRPLRAISRWQGMKIVVN 1095
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I A+ N+ V I +F++ G+QL+ +
Sbjct: 1096 ALMYAIPAIFNVAVVCTIFWLVFSIAGVQLYGGKF 1130
>gi|311698111|gb|ADQ00350.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Paramormyrops sp. 'magnostipes' type III morph]
Length = 933
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 13 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNILIKIIGNS 72
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 73 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 103
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 765 ALRQYFFSAGWNIFDSVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 824
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 825 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 864
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 450 YFTNAWCWLDFLIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 509
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 510 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 544
>gi|47210106|emb|CAF93432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1469
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 484 YFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 543
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 544 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 574
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 19/104 (18%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS--------LVDLMTEFVDGLSVLRGLRLSW------- 45
+AL YF GWN+FD +VV S L D++ ++ ++ R +RL+
Sbjct: 1085 IALRRHYFSIGWNVFDFVVVILSILGVSGLLLADIIEKYFVSPTLFRVIRLARIGRVLRL 1144
Query: 46 ----TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1145 IRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1188
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVL 51
YF W D ++V SLV L + L LR LR + M+V+
Sbjct: 768 KSYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVV 827
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ ++ + ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 828 VNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 865
>gi|441662642|ref|XP_004091628.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Nomascus leucogenys]
Length = 1810
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+ L YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1406 LXLRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1465
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1466 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1506
>gi|81394320|gb|AAK55442.2| Nav1.4a [Sternopygus macrurus]
Length = 1823
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L + GLSVLR RL SW T+ +L+ II ++
Sbjct: 635 YFQVGWNIFDCIIVTLSLVELSLSNMPGLSVLRSFRLMRIFKLAKSWPTLNMLIKIIGNS 694
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL IVI+IFAV+G QLF K Y
Sbjct: 695 MGALGNLTFVLAIVIFIFAVVGFQLFGKSY 724
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRLSWTT--MKVLLSIIISTIGA 61
WN D +V++ + + TEFVD VLR LR + ++ +++ +I ++
Sbjct: 188 WNCLDFMVISMAYI---TEFVDLGNMSALRTFRVLRALRTITVSPGLRTIVAALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
+G++ + + + +F ++G+QLF
Sbjct: 245 MGDVIILTLFALSVFTLVGLQLF 267
>gi|301619887|ref|XP_002939317.1| PREDICTED: sodium channel protein type 2 subunit alpha [Xenopus
(Silurana) tropicalis]
Length = 1937
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 828 YFQVGWNIFDGVIVSLSLMELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 887
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K APD
Sbjct: 888 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAPD 927
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1283 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1342
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ +FS Y
Sbjct: 1343 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGKY 1377
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
>gi|431908874|gb|ELK12466.1| Sodium channel protein type 4 subunit alpha [Pteropus alecto]
Length = 1807
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWN+FD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 613 EYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 672
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 673 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 705
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1375 LALRHYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1434
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1435 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1475
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1065 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1124
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1125 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1171
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 182 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 238
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 239 LSDVMILTVFCLSVFALVGLQLF 261
>gi|195177456|ref|XP_002028910.1| GL10268 [Drosophila persimilis]
gi|194105882|gb|EDW27925.1| GL10268 [Drosophila persimilis]
Length = 404
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 17/110 (15%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 294 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 353
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT-----SEKFAPD----PVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT + + PD P+P
Sbjct: 354 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTGTIGETNRIPPDQESLPLP 403
>gi|395826075|ref|XP_003786245.1| PREDICTED: sodium channel protein type 4 subunit alpha [Otolemur
garnettii]
Length = 1824
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWN+FD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1399 LALRQYFFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1458
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1459 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1499
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1086 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1145
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1146 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1192
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|432924970|ref|XP_004080675.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Oryzias latipes]
Length = 1815
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 625 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 684
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 685 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 716
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWN+FD IVV S L DL+ ++ ++ R +RL+
Sbjct: 1390 ALRHYFFTNGWNVFDFIVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1449
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ M F+
Sbjct: 1450 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFAMSNFA 1489
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D +V SLV L+ + + L LR LR + M+V+++
Sbjct: 1076 YFTNAWCWLDFFIVDISLVSLVASWLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1135
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1136 ALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 1170
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 155 WNWLDFMVISMAYI---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 211
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+V+ ++ +FA++G+QLF
Sbjct: 212 MVDVMVLTVFALAVFALVGLQLF 234
>gi|1110496|gb|AAA98558.1| sodium channel protein, partial [Drosophila virilis]
Length = 335
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 107 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 166
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 167 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 207
>gi|311698083|gb|ADQ00336.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Petrocephalus soudanensis]
Length = 962
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT SLV++ V+GLSVLR RL SW T+ +LL+II ++
Sbjct: 37 YFQVGWNVFDSIIVTMSLVEMGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLTIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYKD 128
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S L DL+ ++ ++ R +RL+
Sbjct: 793 IALRQYFFTIGWNVFDFIVVFFSIASMFLADLIEKYFVSPTLFRVVRLARIGRVLRLIRG 852
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +VI+IF++ GM F+
Sbjct: 853 AKGIRTLLFALMMSLPALFNIGLLLFLVIFIFSIFGMSNFA 893
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 481 YFTNAWCWLDFLIVDVSLVSLAANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 540
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 541 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 572
>gi|82612063|gb|ABB84808.1| sodium channel 1 [Gnathonemus petersii]
Length = 789
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 32 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 91
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 92 VGALGNLTLVLAIIVFIFAVVGMQLFEKNYKD 123
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 469 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 528
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D V
Sbjct: 529 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTTEERFPLDIV 580
>gi|345318735|ref|XP_003430053.1| PREDICTED: sodium channel protein type 4 subunit alpha-like,
partial [Ornithorhynchus anatinus]
Length = 1039
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWN+FD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 754 EYFQQGWNVFDSIIVTLSLVELGLADVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 813
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 814 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 846
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 203 WNWLDFSVI---MMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 259
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 260 LSDVMILTVFCLSVFALVGLQLF 282
>gi|311698137|gb|ADQ00363.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Electrophorus electricus]
Length = 906
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 8 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 67
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 68 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 99
>gi|327242739|gb|AEA41103.1| para-like sodium channel [Stomoxys calcitrans]
Length = 1759
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW TM +L
Sbjct: 492 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTMNLL 551
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 552 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 592
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 18/113 (15%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1297 ALRCHYFKEPWNLFDVVVVVLSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1356
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ LL + ++ AL N+ +L +V++IFA+ GM F + EK + PV
Sbjct: 1357 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFM--HVKEKSSIGPV 1407
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + L LR LR M+V+++
Sbjct: 987 YFTNAWCWLDFVIVMVSLINFVASLAGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1046
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1047 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1081
>gi|1110479|gb|AAA98546.1| sodium channel protein, partial [Drosophila melanogaster]
Length = 348
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 107 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 166
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 167 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 207
>gi|224054968|ref|XP_002198054.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Taeniopygia guttata]
Length = 1982
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SL +L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 809 NYFQVGWNIFDSFIVTLSLAELFLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 868
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S L +++ ++ ++ R +RL+ ++
Sbjct: 1570 YFTIGWNIFDFVVVILSIIGMFLAEVIEKYFVSPTLFRVVRLARIGRILRLIKGAKGIRT 1629
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1630 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V+ + + TEFV+ LS LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFVVICFAYI---TEFVNLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LSDVMILTVFCLSVFALIGLQLF 272
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ +EF + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVSLVATALGFSEFGAIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V + IF+++G+ LF+ +
Sbjct: 1310 ALTGAIPSIMNVLLVCLTFWLIFSIMGVNLFAGKF 1344
>gi|1110495|gb|AAA98557.1| sodium channel protein, partial [Drosophila virilis]
Length = 348
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 107 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 166
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 167 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 207
>gi|729137|sp|Q05973.1|SCN1_LOLBL RecName: Full=Sodium channel protein 1 brain; AltName: Full=Sodium
channel protein I brain
gi|287449|dbj|BAA03398.1| sodium channel [Loligo bleekeri]
Length = 1522
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%), Gaps = 8/107 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+A + YF+ GWNI DL+VV ASL+DL E + G+SV R RL SWTTM++LL
Sbjct: 463 LAFNKQYFKSGWNICDLVVVVASLIDLGVEGLKGVSVFRSFRLLRVFHLAQSWTTMRLLL 522
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
II++T+G+LG LT +L+IVIYIFAV G+QLF +YT +KF +PVP
Sbjct: 523 CIILNTLGSLGYLTIILIIVIYIFAVTGLQLFHTEYTPDKFRGEPVP 569
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 17/103 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVD--LMTEFVDGL----SVLRGLRL----------S 44
+ L Y + WN+FD +VVT S++D L F DG+ S+LR R+
Sbjct: 1153 IGLRIHYLRNLWNVFDFLVVTLSVMDAFLNDIFGDGIFMNPSLLRVARMFRIGRIIRLIK 1212
Query: 45 WTT-MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
W M+ LL ++ ++ AL N+ +L++V++I+ +IGM F +
Sbjct: 1213 WAKGMRKLLFALVISLPALFNIGALLMLVMFIYTIIGMSSFGQ 1255
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMT-----EFVDGLSVLRGLRL--------SWTTMKVLL 52
Y+ W I D +V +++ L E + LR LR W MK+++
Sbjct: 842 HYYTHFWTILDFTIVIITVISLAASGLGMEQITAFRSLRTLRALRPLRAVSRWQGMKIIV 901
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ +I ++ N+ V V+ IFA++G+QLF+ +
Sbjct: 902 NALMLSIPSIFNVLLVCVVFWLIFAIMGVQLFAGKF 937
>gi|311698077|gb|ADQ00333.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Mormyrops nigricans]
Length = 967
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V SLV++M V+GLSVLR RL SW T+ +LL II ++
Sbjct: 37 YFQVGWNVFDSIIVIMSLVEMMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLMIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFAKNYKD 128
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASL-----VDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV SL DL+ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSLASMLVADLIEKYFVSPTLFRVVRLARIGRVLRLIKG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L++V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLLLVMFIFSIFGMSNFA 898
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTDTWCWLDFLIVDVSLVSLAANMMSYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|4325288|gb|AAD17315.1| voltage-dependent sodium channel [Cynops pyrrhogaster]
Length = 2007
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L + V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQVGWNIFDGIIVSLSLMELGLQNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 907
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGL----SVLRGLRLSW---------- 45
++L + YF GWN+FD +VV S+V + ++E ++ ++ R +RL+
Sbjct: 1584 ISLRHYYFTIGWNVFDFVVVILSIVGMFLSEIIEKYFVSPTLFRVIRLARIGRILRLIKG 1643
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLIANAMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ +FS Y
Sbjct: 1330 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGKY 1364
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V++ + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFSVISMAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
>gi|311698113|gb|ADQ00351.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Paramormyrops gabonensis]
Length = 596
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 13 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 72
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 73 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 103
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 452 YFTNAWCWLDFLIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 511
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 512 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTAEELFP 559
>gi|410895123|ref|XP_003961049.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Takifugu rubripes]
Length = 1888
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 667 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 726
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 727 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 756
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWNIFD IVV S L D++ ++ ++ R +RL+
Sbjct: 1442 ALRHYFFTNGWNIFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1501
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1502 RGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1541
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 1127 YFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1186
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1187 ALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1221
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 183 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 239
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ ++ +FA++G+QLF
Sbjct: 240 MVDVMILTVFALAVFALVGLQLF 262
>gi|6815119|dbj|BAA90398.1| voltage-gated sodium channel [Takifugu pardalis]
Length = 1880
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 659 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 718
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 719 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 748
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD IVV S L D++ ++ ++ R +RL+
Sbjct: 1433 IALRHYFFTNGWNIFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKG 1492
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1493 ARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1533
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 1119 YFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1178
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1179 ALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1213
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 183 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 239
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ ++ +FA++G+QLF
Sbjct: 240 MVDVMILTVFALAVFALVGLQLF 262
>gi|449275391|gb|EMC84263.1| Sodium channel protein type 2 subunit alpha, partial [Columba
livia]
Length = 1299
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V SLV+L VDGLSVLR RL SW T+ +L+ II ++
Sbjct: 804 YFQVGWNIFDSFIVVLSLVELFLSNVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 863
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 895
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFVVISFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LSDVMILTVFCLSVFALIGLQLF 272
>gi|311698139|gb|ADQ00364.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Eigenmannia virescens]
Length = 939
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 126
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWNIFD IVV S L DL+ ++ ++ R +RL+
Sbjct: 770 IALRHYFFSIGWNIFDFIVVILSIAGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRG 829
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 830 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 870
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 456 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 515
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 516 ALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 550
>gi|444705720|gb|ELW47112.1| Sodium channel protein type 3 subunit alpha [Tupaia chinensis]
Length = 1831
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L VDGLSVLR RL SW T+ +L+ II ++
Sbjct: 755 YFQEGWNIFDGIIVSLSLMELGLSNVDGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 814
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 815 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 846
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1421 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1480
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1481 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1515
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1203 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1262
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1263 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1297
>gi|123913391|sp|Q2XVR7.1|SC4AA_FUGRU RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|78172670|gb|ABB29441.1| voltage-gated sodium channel Nav1.4a [Takifugu rubripes]
Length = 1892
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 671 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 730
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 731 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 760
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWNIFD IVV S L D++ ++ ++ R +RL+
Sbjct: 1446 ALRHYFFTNGWNIFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1505
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1506 RGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1545
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 1131 YFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1190
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1191 ALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1225
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 187 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 243
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ ++ +FA++G+QLF
Sbjct: 244 MVDVMILTVFALAVFALVGLQLF 266
>gi|311698127|gb|ADQ00358.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Gymnarchus niloticus]
Length = 952
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQTGWNIFDSIIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 127
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 783 LALRQYYFSIGWNIFDFVVVILSILGLLLADLIGKYFVSPTLFRVIRLARIGRVLRLIRG 842
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 843 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 883
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 469 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 528
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ Y TSE++
Sbjct: 529 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCLNITSEEY 574
>gi|311698109|gb|ADQ00349.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Gnathonemus petersii]
Length = 935
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 25 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 84
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 85 VGALGNLTLVLAIIVFIFAVVGMQLFEKNYKD 116
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 777 ALRQYFFSAGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 836
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 837 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 876
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 462 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 521
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D V
Sbjct: 522 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTTEERFPLDIV 573
>gi|1110497|gb|AAA98559.1| sodium channel protein, partial [Drosophila virilis]
Length = 340
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 99 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 158
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+YT K
Sbjct: 159 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHK 199
>gi|317419626|emb|CBN81663.1| Sodium channel protein type 4 subunit alpha A [Dicentrarchus
labrax]
Length = 1855
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 631 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 690
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 691 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 720
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1400 ALRHYFFTNGWNIFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1459
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1460 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1499
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + + TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 157 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKK 213
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ ++ +FA++G+QLF
Sbjct: 214 MVDVMILTVFALAVFALVGLQLF 236
>gi|311698133|gb|ADQ00361.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Steatogenys elegans]
Length = 946
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLSMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 126
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 778 IALRQYYFSIGWNIFDFVVVILSIAGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRG 837
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 838 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 878
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 464 YFTNAWCWLDFLIVDVSLISLTANLLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 523
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 524 ALIGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 558
>gi|311698153|gb|ADQ00371.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Takifugu pardalis]
Length = 927
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTISLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 126
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 759 IALRRHYFSIGWNIFDFVVVILSILGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 818
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 819 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 859
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 444 YFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 503
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ + ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 504 ALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 539
>gi|311698075|gb|ADQ00332.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Mormyrus rume]
Length = 919
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T+ +LL+II ++
Sbjct: 37 YFQGGWNVFDSIIVTISIVEMLFADVEGLSVLRCFRLLRVFKLAKSWPTLNMLLTIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLFSK Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFSKSYK 127
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + DL+ ++ ++ R +RL+
Sbjct: 797 IALRQYFFTIGWNVFDFIVVIFSVASMMVADLIEKYFVSPTLFRVVRLARIGRVLRLVRG 856
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 857 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 897
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 485 YFTNAWCWLDFLIVDVSLISLAASIMGYSEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 544
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ I A+ N+ V +I IF+++G+ LF+
Sbjct: 545 ALVGAIPAIFNVMLVCLIFWLIFSIMGVNLFA 576
>gi|148277528|tpe|CAM31893.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 864 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLMSIMGRT 923
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 924 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDKDLP 966
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1686 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1745
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1746 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1784
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1376 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1435
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1436 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1470
>gi|89886319|ref|NP_001034914.1| sodium channel protein type 4 subunit alpha A [Danio rerio]
gi|123910533|sp|Q2XVR3.2|SC4AA_DANRE RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|84310206|gb|ABB29445.2| voltage-gated sodium channel Nav1.4a [Danio rerio]
Length = 1829
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 641 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 700
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 701 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 730
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWN+FD +VV S L D++ ++ ++ R +RL+
Sbjct: 1372 ALRQYFFTIGWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 1431
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1432 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1471
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1058 YFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1117
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 1118 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTEERIP 1165
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + V TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 186 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 242
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ I+ +FA+IG+QLF
Sbjct: 243 MIDVMILTIFALAVFALIGLQLF 265
>gi|229442283|gb|AAI72906.1| sodium channel, voltage gated, type VIII, alpha [synthetic
construct]
Length = 575
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 253 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 312
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 313 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 342
>gi|148277536|tpe|CAM31891.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 864 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLMSIMGRT 923
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 924 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDKDLP 966
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++L +V L LR LR W M+V+++
Sbjct: 1376 YFTNAWCWLDFIIVMLSLINLFAIWVGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVN 1435
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1436 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1470
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1686 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1745
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1746 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1784
>gi|291415629|ref|XP_002724054.1| PREDICTED: sodium channel, voltage-gated, type V, alpha subunit
[Oryctolagus cuniculus]
Length = 1900
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 722 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 781
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 782 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 815
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR LS + M+V+++
Sbjct: 1212 YFTSAWCWLDFLIVAVSLVSLVANTLGFSEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 1271
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1272 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL--------SWTTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVIAGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|77683215|gb|ABA54921.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a [Danio
rerio]
Length = 1827
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 641 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 700
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 701 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 730
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWN+FD +VV S L D++ ++ ++ R +RL+
Sbjct: 1370 ALRQYFFTIGWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 1429
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1430 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1469
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1057 YFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1116
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1117 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1151
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL-----SWTTMKVLLSIIISTIGALGN 64
WN D +V++ + V TEFVD +S LR R+ + T + L +I+ + I ++
Sbjct: 186 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 242
Query: 65 LTFVLVIVIY---IFAVIGMQLF 84
+ V+++ I+ +FA+IG+QLF
Sbjct: 243 MIDVMILTIFALAVFALIGLQLF 265
>gi|311698129|gb|ADQ00359.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Rhamphichthys marmoratus]
Length = 941
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLSMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 126
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 782 IALRQYFFSIGWNIFDFVVVILSIAGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 841
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 842 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 882
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 468 YFTNAWCWLDFLIVDVSLISLTANILGYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVN 527
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 528 ALVGAIPSIFNVMLVRLIFWLIFSIMGVNLFAGKFYYCFNQTSEEF 573
>gi|391334696|ref|XP_003741737.1| PREDICTED: sodium channel protein para-like [Metaseiulus
occidentalis]
Length = 2111
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 74/110 (67%), Gaps = 11/110 (10%)
Query: 1 MALS-NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA S +YF+ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 887 MAKSPKNYFKEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 946
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDPVP 99
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+Y K F VP
Sbjct: 947 ISIMGKTIGALGNLTFVLAIIIFIFAVMGMQLFGKNYVDNKCLFPEQKVP 996
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V S+++L+ ++ L LR LR + M+V+++
Sbjct: 1420 YFTNAWCWLDFVIVFVSVINLVATWLGAGKIQAFKTMRTLRALRPLRALSRFQGMRVVVN 1479
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I A+ N+ V +I IF+++G+Q+F+ +
Sbjct: 1480 ALVQAIPAIFNVLLVCLIFWLIFSIMGVQMFAGKF 1514
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VV S L DL+ ++ L +++G
Sbjct: 1730 ALRWHYFKEPWNMFDFVVVILSILGTVLKDLIAKYFVSPTLLRVVRVVKVGRVLRLVKGA 1789
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1790 R----GIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1828
>gi|311698115|gb|ADQ00352.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Pollimyrus adspersus]
Length = 949
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 31 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 90
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 91 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 120
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 781 ALRQYFFSAGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 840
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 841 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 880
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 466 YFTNAWCWLDFLIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 525
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D V
Sbjct: 526 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTTEERFTLDIV 577
>gi|259906457|ref|NP_001159380.1| paralytic A [Tribolium castaneum]
gi|258674491|gb|ACV87002.1| paralytic A [Tribolium castaneum]
Length = 2045
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 865 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 924
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 925 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHELP 967
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FDL+VV S L D++ ++ ++LR +R++
Sbjct: 1655 ALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1714
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1715 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1753
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1345 YFTNAWCWLDFIIVMVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1404
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1405 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1439
>gi|270015106|gb|EFA11554.1| paralytic [Tribolium castaneum]
Length = 2070
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 890 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 949
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 950 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHELP 992
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FDL+VV S L D++ ++ ++LR +R++
Sbjct: 1680 ALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1739
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1740 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1778
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1370 YFTNAWCWLDFIIVMVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1429
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1430 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1464
>gi|327242741|gb|AEA41104.1| para-like sodium channel [Stomoxys calcitrans]
Length = 270
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 11/110 (10%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW TM +L
Sbjct: 64 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTMNLL 123
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 124 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHKDKFIDHELP 173
>gi|311698135|gb|ADQ00362.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Gymnotus cylindricus]
Length = 917
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 34 YFQVGWNIFDSIIVTMSLVELGLASVEGLSVLRSFRLMRVFKLAKSWPTLSMLIKIIGNS 93
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 94 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 123
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD IVV S L DL+ ++ ++ R +RL+
Sbjct: 776 IALRQYFFSIGWNIFDFIVVILSIAGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRG 835
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 836 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF 875
>gi|432926596|ref|XP_004080906.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oryzias latipes]
Length = 2043
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 838 YFQTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNS 897
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
IGALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 898 IGALGNLTLVLAIIVFIFAVVGMQLFGKNY 927
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1587 VALRCYFFTIGWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRG 1646
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1647 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1687
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I +
Sbjct: 251 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQAVKK 307
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 308 LADVMILTVFCLSVFALIGLQLF 330
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D +V SLV L + L LR LR + M+V+
Sbjct: 1273 KKYFTNYWCWLDFFIVDVSLVSLAANMLGYSDFAAIKSLRTLRALRPLRALSRFEGMRVV 1332
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1333 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1369
>gi|383858788|ref|XP_003704881.1| PREDICTED: sodium channel protein para-like isoform 4 [Megachile
rotundata]
Length = 2044
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 866 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 925
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 926 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHVDRFPDGELP 968
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1349 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
>gi|198468369|ref|XP_001354677.2| GA22114 [Drosophila pseudoobscura pseudoobscura]
gi|198146382|gb|EAL31732.2| GA22114 [Drosophila pseudoobscura pseudoobscura]
Length = 2053
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 869 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 928
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT
Sbjct: 929 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTEH 961
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1576 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1635
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1636 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1674
>gi|401728827|gb|AFQ00697.1| sodium channel [Culex quinquefasciatus]
Length = 2092
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 850 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 909
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 910 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDKDLP 952
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1649 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1708
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1709 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1747
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1339 YFTDAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1398
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1399 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1433
>gi|414091065|gb|AFW98420.1| sodium channel Na-Lv8 [Culex quinquefasciatus]
Length = 2091
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 875 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 934
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 935 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDKDLP 977
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1648 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1707
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1708 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1746
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1338 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1397
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1398 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1432
>gi|327242743|gb|AEA41105.1| para-like sodium channel [Stomoxys calcitrans]
Length = 270
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 11/110 (10%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW TM +L
Sbjct: 64 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTMNLL 123
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 124 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHKDKFIDHELP 173
>gi|383858784|ref|XP_003704879.1| PREDICTED: sodium channel protein para-like isoform 2 [Megachile
rotundata]
Length = 2036
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 848 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 907
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 908 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHVDRFPDGELP 950
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1651 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1710
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1711 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1749
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1341 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1400
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1401 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1435
>gi|383858782|ref|XP_003704878.1| PREDICTED: sodium channel protein para-like isoform 1 [Megachile
rotundata]
Length = 2050
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 855 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 914
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 915 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHVDRFPDGELP 957
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1665 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1724
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1725 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1763
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1355 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1414
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1415 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1449
>gi|319772938|gb|ADV73289.1| voltage-dependent sodium channel 2 [Heterodontus francisci]
Length = 1175
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L VDGL+VLR RL SW T+ +L+ II ++
Sbjct: 584 YFQQGWNIFDSIIVCLSLIELGLAKVDGLTVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 643
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 644 MGALGNLTLVLAIIVFIFAVVGMQLFGKNYN 674
>gi|383858786|ref|XP_003704880.1| PREDICTED: sodium channel protein para-like isoform 3 [Megachile
rotundata]
Length = 2023
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 845 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 904
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 905 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHVDRFPDGELP 947
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1638 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1697
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1698 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1736
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1328 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1387
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1388 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1422
>gi|270015129|gb|EFA11577.1| hypothetical protein TcasGA2_TC004749 [Tribolium castaneum]
Length = 2031
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 856 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 915
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 916 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHELP 958
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FDL+VV S L D++ ++ ++LR +R++
Sbjct: 1640 ALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1699
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1700 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1738
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + L LR LR M+V+++
Sbjct: 1330 YFTNAWCWLDFVIVMVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1389
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1390 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1424
>gi|158298034|ref|XP_318122.4| AGAP004707-PA [Anopheles gambiae str. PEST]
gi|157014614|gb|EAA43760.4| AGAP004707-PA [Anopheles gambiae str. PEST]
Length = 2118
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 843 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 902
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 903 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHDLP 945
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1655 ALRYHYFIEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1714
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1715 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1753
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1342 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1401
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1402 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1436
>gi|259906459|ref|NP_001159381.1| paralytic B [Tribolium castaneum]
gi|258674493|gb|ACV87003.1| paralytic B [Tribolium castaneum]
Length = 2048
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 863 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 922
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 923 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHELP 965
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FDL+VV S L D++ ++ ++LR +R++
Sbjct: 1657 ALRYHYFTEPWNLFDLVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1716
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1717 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1755
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + L LR LR M+V+++
Sbjct: 1347 YFTNAWCWLDFVIVMVSLINFIASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1406
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1407 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1441
>gi|158298038|ref|XP_554647.3| AGAP004707-PC [Anopheles gambiae str. PEST]
gi|157014616|gb|EAL39442.3| AGAP004707-PC [Anopheles gambiae str. PEST]
Length = 2092
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 843 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 902
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 903 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDHDLP 945
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1629 ALRYHYFIEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1688
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1689 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1727
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1316 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1375
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1376 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1410
>gi|363735982|ref|XP_003641634.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Gallus gallus]
Length = 2013
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 836 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 895
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 896 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 927
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1600 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1659
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1660 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1700
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1286 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1345
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1346 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1397
>gi|311698107|gb|ADQ00348.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Ictalurus punctatus]
Length = 942
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL IV++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIVVFIFAVVGMQLFGKSYK 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWN+FD IVV S L D++ ++ ++ R +RL+
Sbjct: 774 ALRQYFFTVGWNVFDFIVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGA 833
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 834 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 873
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 460 YFTNAWCWLDFFIVDVSLIGLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 519
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y T+E+ P
Sbjct: 520 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTEELLP 567
>gi|350409729|ref|XP_003488828.1| PREDICTED: sodium channel protein para-like [Bombus impatiens]
Length = 2044
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 866 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 925
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 926 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLP 968
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1349 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
>gi|126723545|ref|NP_001075827.1| sodium channel protein type 9 subunit alpha [Oryctolagus cuniculus]
gi|55976305|sp|Q28644.1|SCN9A_RABIT RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Nas; AltName: Full=Schwann cell sodium channel;
AltName: Full=Sodium channel protein type IX subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.7
gi|1022714|gb|AAA89159.1| sodium channel alpha-subunit [Oryctolagus cuniculus]
Length = 1984
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWN+FD ++VT SLV+L V+GLSVLR RL SW T+ +L+ II +
Sbjct: 799 EYFQVGWNVFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 858
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++G LGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 SVGPLGNLTLVLAIIVFIFAVVGMQLFGKSYKE 891
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ + ++ R +RL+
Sbjct: 1564 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIETYFVSPTLFRVIRLARIGRILRLIKG 1623
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1624 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
>gi|363735992|ref|XP_003641639.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 7
[Gallus gallus]
Length = 1961
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 916
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1548 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1607
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1608 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1648
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|149054578|gb|EDM06395.1| sodium channel, voltage-gated, type IV, alpha polypeptide [Rattus
norvegicus]
Length = 1444
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 234 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 293
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 294 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 326
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1003 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1062
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1063 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1102
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 689 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 748
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 749 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERF 795
>gi|432098373|gb|ELK28173.1| Sodium channel protein type 1 subunit alpha [Myotis davidii]
Length = 1640
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 695 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 754
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 755 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 784
>gi|224054956|ref|XP_002197845.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Taeniopygia guttata]
Length = 2002
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 824 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 883
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 884 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 915
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1589 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1648
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1689
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1275 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1334
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1335 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1386
>gi|148277532|tpe|CAM31895.1| TPA: voltage-gated sodium channel alpha subunit [Nasonia
vitripennis]
Length = 2084
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 846 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 905
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT +
Sbjct: 906 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDK 938
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLR--LSWTTMKVLLS 53
YF W D I+V SLV++ + L LR LR W M+V+++
Sbjct: 1329 YFTNAWCWLDFIIVMLSLVNVAAIWAGVADIPAFRSMRTLRALRPLRGVSRWEGMRVVVN 1388
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1389 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1423
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1639 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1698
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1699 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1737
>gi|363735984|ref|XP_003641635.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Gallus gallus]
Length = 2002
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 916
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1589 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1648
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1689
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1275 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1334
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1335 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1386
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|6981512|ref|NP_037310.1| sodium channel protein type 4 subunit alpha [Rattus norvegicus]
gi|116453|sp|P15390.1|SCN4A_RAT RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=Mu-1; AltName: Full=SkM1; AltName: Full=Sodium
channel protein skeletal muscle subunit alpha; AltName:
Full=Sodium channel protein type IV subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4
gi|205652|gb|AAA41682.1| voltage-sensitive sodium channel alpha subunit [Rattus norvegicus]
Length = 1840
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1399 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1458
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1459 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1498
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1085 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1144
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1145 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERF 1191
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|342837667|tpg|DAA34923.1| TPA_inf: voltage-dependent sodium channel SCN1A [Ornithorhynchus
anatinus]
Length = 1945
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 771 YFQEGWNIFDSFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 830
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 831 VGALGNLTVVLAIIVFIFAVVGMQLFGKNYKE 862
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1533 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1592
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1593 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1633
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 148 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 204
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 205 LSDVMILTVFCLSVFALIGLQLF 227
>gi|118093608|ref|XP_001233839.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Gallus gallus]
Length = 2002
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 916
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1589 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1648
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1689
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1275 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1334
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1335 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1386
>gi|340718624|ref|XP_003397764.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein para-like
[Bombus terrestris]
Length = 2044
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 866 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 925
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 926 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLP 968
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1349 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
>gi|327264339|ref|XP_003216971.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
5 [Anolis carolinensis]
Length = 1964
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 797 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 856
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 857 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 896
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1560 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1619
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1620 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1659
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1244 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1304 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1338
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
+ + WN D V+ + V TEFVD +S LR R+ +K ++ +I
Sbjct: 189 FLRDAWNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI 245
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA+IG+QLF
Sbjct: 246 QSVKKLSDVMILTVFCLSVFALIGLQLF 273
>gi|327264335|ref|XP_003216969.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Anolis carolinensis]
Length = 1979
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 911
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
+ + WN D V+ + V TEFVD +S LR R+ +K ++ +I
Sbjct: 189 FLRDAWNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI 245
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA+IG+QLF
Sbjct: 246 QSVKKLSDVMILTVFCLSVFALIGLQLF 273
>gi|327264333|ref|XP_003216968.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Anolis carolinensis]
Length = 1979
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 911
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|327264331|ref|XP_003216967.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Anolis carolinensis]
Length = 1990
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 823 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 882
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 883 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 922
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1586 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1645
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1646 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1685
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1270 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1330 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1364
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
+ + WN D V+ + V TEFVD +S LR R+ +K ++ +I
Sbjct: 189 FLRDAWNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI 245
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA+IG+QLF
Sbjct: 246 QSVKKLSDVMILTVFCLSVFALIGLQLF 273
>gi|345328066|ref|XP_003431231.1| PREDICTED: sodium channel protein type 1 subunit alpha-like
[Ornithorhynchus anatinus]
Length = 1949
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 771 YFQEGWNIFDSFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 830
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 831 VGALGNLTVVLAIIVFIFAVVGMQLFGKNYKE 862
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1533 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1592
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1593 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1633
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 148 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 204
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 205 LSDVMILTVFCLSVFALIGLQLF 227
>gi|134948032|ref|NP_573462.2| sodium channel protein type 4 subunit alpha [Mus musculus]
gi|148702345|gb|EDL34292.1| sodium channel, voltage-gated, type IV, alpha [Mus musculus]
Length = 1841
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1400 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1459
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1460 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1499
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1086 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1145
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1146 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1192
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|363735988|ref|XP_003641637.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 5
[Gallus gallus]
Length = 1985
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 808 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 867
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 868 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 899
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1572 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1631
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1632 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1672
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1258 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1317
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1318 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1369
>gi|343098408|tpg|DAA34935.1| TPA_inf: voltage-dependent sodium channel SCN8A [Anolis
carolinensis]
Length = 1973
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 807 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 866
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 867 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 906
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1569 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1628
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1629 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1668
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1254 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1313
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1314 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1348
>gi|125858951|gb|AAI29806.1| Scn4a protein [Mus musculus]
Length = 1840
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 629 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 688
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 689 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 721
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1399 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1458
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1459 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1498
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1085 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1144
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1145 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1191
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 249 LSDVMILTVFCLSVFALVGLQLF 271
>gi|81906264|sp|Q9ER60.1|SCN4A_MOUSE RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=Sodium channel protein skeletal muscle subunit
alpha; AltName: Full=Sodium channel protein type IV
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.4
gi|11342595|emb|CAC17146.1| voltage-gated sodium channel [Mus musculus]
Length = 1841
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1400 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1459
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1460 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1499
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1086 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1145
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1146 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1192
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|363735990|ref|XP_003641638.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 6
[Gallus gallus]
Length = 1956
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 779 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 870
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1543 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1602
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1603 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1643
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1229 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1288
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1289 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1340
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|363735986|ref|XP_003641636.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Gallus gallus]
Length = 1956
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 779 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 870
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1543 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1602
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1603 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1643
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1229 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1288
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D +
Sbjct: 1289 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFEVDQI 1340
>gi|148277534|tpe|CAM31896.1| TPA: voltage-gated sodium channel alpha subunit [Nasonia
vitripennis]
Length = 2084
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 846 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 905
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT +
Sbjct: 906 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDK 938
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1639 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1698
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1699 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1737
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1329 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1388
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1389 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1423
>gi|3087876|emb|CAA76659.1| rat skeletal muscle type 1 voltage-gated sodium channel (rSkM1)
variant [Rattus norvegicus]
Length = 1840
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 630 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 689
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 690 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 722
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1399 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1458
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1459 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1498
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1085 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1144
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1145 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERF 1191
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|86261868|dbj|BAE78657.1| skeletal muscle sodium channel [Gallus gallus]
Length = 607
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 21 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 80
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 81 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 111
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + + L LR LR + M+V+++
Sbjct: 459 YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 518
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 519 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 553
>gi|354479427|ref|XP_003501911.1| PREDICTED: sodium channel protein type 4 subunit alpha [Cricetulus
griseus]
Length = 1841
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 629 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 688
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 689 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 721
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1399 ALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1458
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1459 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1498
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1085 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1144
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1145 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERF 1191
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVITMAYV---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|259906449|ref|NP_001159377.1| sodium channel protein paralytic [Apis mellifera]
gi|258674487|gb|ACV87000.1| paralytic [Apis mellifera]
Length = 2044
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 866 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 925
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 926 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLP 968
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1349 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
>gi|201023289|ref|NP_001128390.1| voltage-gated sodium channel alpha subunit isoform k [Nasonia
vitripennis]
Length = 2084
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 846 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 905
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT +
Sbjct: 906 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDK 938
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLR--LSWTTMKVLLS 53
YF W D I+V SLV++ + L LR LR W M+V+++
Sbjct: 1329 YFTNAWCWLDFIIVMLSLVNVAAIWAGVADIPAFRSMRTLRALRPLRGVSRWEGMRVVVN 1388
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1389 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1423
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1639 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1698
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1699 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1737
>gi|395519673|ref|XP_003763967.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 6
[Sarcophilus harrisii]
Length = 1952
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 914
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1540 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1599
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1600 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1640
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVNLGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|201023287|ref|NP_001128389.1| voltage-gated sodium channel alpha subunit isoform l [Nasonia
vitripennis]
Length = 2084
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 846 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 905
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT +
Sbjct: 906 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDK 938
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1639 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1698
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1699 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1737
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1329 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1388
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1389 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1423
>gi|395519663|ref|XP_003763962.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Sarcophilus harrisii]
Length = 2004
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 826 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 886 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 925
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1592 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1651
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1692
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1278 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1337
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1338 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1372
>gi|380028083|ref|XP_003697741.1| PREDICTED: sodium channel protein para-like [Apis florea]
Length = 2078
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 900 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 959
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 960 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLP 1002
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1693 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1752
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1753 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1791
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1383 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1442
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1443 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1477
>gi|334323136|ref|XP_003340349.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha-like [Monodelphis domestica]
Length = 1811
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 619 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 678
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 679 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 711
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1386 ALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1445
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1446 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1485
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1072 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1131
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G LF+ Y
Sbjct: 1132 ALLGAIPSIMNVLLVCLIFWLIFSIMGXNLFAGKY 1166
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LSDVMILTVFCLSVFALIGLQLF 272
>gi|320542196|ref|NP_001188635.1| paralytic, isoform AN [Drosophila melanogaster]
gi|318069425|gb|ADV37717.1| paralytic, isoform AN [Drosophila melanogaster]
Length = 2143
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1374 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1433
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1434 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1468
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1684 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1743
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1744 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1782
>gi|442616616|ref|NP_001259619.1| paralytic, isoform BF [Drosophila melanogaster]
gi|440216848|gb|AGB95461.1| paralytic, isoform BF [Drosophila melanogaster]
Length = 2145
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|327264337|ref|XP_003216970.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
4 [Anolis carolinensis]
Length = 1938
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++LM V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLLELMLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 911
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|84874580|gb|ABC68287.1| Nav1.4a [Osteoglossum bicirrhosum]
Length = 824
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 43 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 102
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 103 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 134
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 495 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 554
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + TSE+ P
Sbjct: 555 ALVGAILSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTSEERLP 602
>gi|395519665|ref|XP_003763963.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Sarcophilus harrisii]
Length = 1993
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 914
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1581 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1640
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1641 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1681
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|320542192|ref|NP_001188633.1| paralytic, isoform AL [Drosophila melanogaster]
gi|318069423|gb|ADV37715.1| paralytic, isoform AL [Drosophila melanogaster]
Length = 2111
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1342 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1401
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1402 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1436
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1652 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1711
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1712 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1750
>gi|395532896|ref|XP_003768502.1| PREDICTED: sodium channel protein type 4 subunit alpha [Sarcophilus
harrisii]
Length = 1812
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 620 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 679
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 680 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 712
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S L DL+ ++ ++ R +RL+
Sbjct: 1387 ALRHYYFTVGWNIFDFVVVILSIAGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1446
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1447 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1486
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1073 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1132
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1133 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1167
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|320542142|ref|NP_001188608.1| paralytic, isoform M [Drosophila melanogaster]
gi|318069398|gb|ADV37690.1| paralytic, isoform M [Drosophila melanogaster]
Length = 2100
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 922 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 962
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
>gi|443693804|gb|ELT95078.1| hypothetical protein CAPTEDRAFT_210954 [Capitella teleta]
Length = 1690
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+Y + WN FD+++V SLV+L E V GLS+LR RL SW T+ +L+ II
Sbjct: 611 EYLKDKWNCFDVVIVILSLVELGLENVKGLSILRSFRLLRVFKLAKSWPTLNLLIGIIGR 670
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
T+GALGNL FVL I+++IFAV+GMQLF + Y E+F PD VP
Sbjct: 671 TLGALGNLCFVLAIIVFIFAVMGMQLFGESYNIERF-PDGVP 711
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFV--------DGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L E L LR LR W MKV+
Sbjct: 1035 KKYFTDVWCWLDFVIVAISLISLGAEGAGMGDIGAFRALRTLRALRPLRAVSRWEGMKVV 1094
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ +I I ++ ++ V ++ IFA++G+QLF
Sbjct: 1095 VNALIQAIPSIFHVLLVCLVFWLIFAIMGVQLF 1127
>gi|395519669|ref|XP_003763965.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Sarcophilus harrisii]
Length = 1976
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 798 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 857
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 858 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 897
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1564 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1623
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1624 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
>gi|395519667|ref|XP_003763964.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Sarcophilus harrisii]
Length = 1993
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 914
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1581 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1640
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1641 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1681
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVNLGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|320542156|ref|NP_001188615.1| paralytic, isoform T [Drosophila melanogaster]
gi|318069405|gb|ADV37697.1| paralytic, isoform T [Drosophila melanogaster]
Length = 2110
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 922 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 962
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1341 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1400
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1401 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1435
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1651 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1710
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1711 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1749
>gi|320542132|ref|NP_001188603.1| paralytic, isoform H [Drosophila melanogaster]
gi|320542190|ref|NP_001188632.1| paralytic, isoform AK [Drosophila melanogaster]
gi|318069393|gb|ADV37685.1| paralytic, isoform H [Drosophila melanogaster]
gi|318069422|gb|ADV37714.1| paralytic, isoform AK [Drosophila melanogaster]
Length = 2097
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1328 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1387
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1388 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1422
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1638 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1697
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1698 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1736
>gi|195392740|ref|XP_002055012.1| paralytic [Drosophila virilis]
gi|194149522|gb|EDW65213.1| paralytic [Drosophila virilis]
Length = 2171
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1715 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1774
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1775 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1813
>gi|320542146|ref|NP_001188610.1| paralytic, isoform O [Drosophila melanogaster]
gi|318069400|gb|ADV37692.1| paralytic, isoform O [Drosophila melanogaster]
Length = 2092
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 841 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 900
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 901 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 941
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1323 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1382
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1383 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1417
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1633 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1692
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1693 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1731
>gi|195048329|ref|XP_001992511.1| GH24791 [Drosophila grimshawi]
gi|193893352|gb|EDV92218.1| GH24791 [Drosophila grimshawi]
Length = 2171
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1715 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1774
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1775 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1813
>gi|194893768|ref|XP_001977935.1| GG19319 [Drosophila erecta]
gi|190649584|gb|EDV46862.1| GG19319 [Drosophila erecta]
Length = 2130
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|320542202|ref|NP_001188638.1| paralytic, isoform AQ [Drosophila melanogaster]
gi|318069428|gb|ADV37720.1| paralytic, isoform AQ [Drosophila melanogaster]
Length = 2089
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 841 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 900
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 901 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 941
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1320 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1379
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1380 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1414
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1630 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1689
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1690 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1728
>gi|320542198|ref|NP_001188636.1| paralytic, isoform AO [Drosophila melanogaster]
gi|318069426|gb|ADV37718.1| paralytic, isoform AO [Drosophila melanogaster]
Length = 2113
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 922 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 962
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1344 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1403
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1404 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1438
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1654 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1713
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1714 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1752
>gi|320542184|ref|NP_001188629.1| paralytic, isoform AH [Drosophila melanogaster]
gi|318069419|gb|ADV37711.1| paralytic, isoform AH [Drosophila melanogaster]
Length = 2107
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1338 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1397
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1398 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1432
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1648 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1707
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1708 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1746
>gi|320542126|ref|NP_001188600.1| paralytic, isoform E [Drosophila melanogaster]
gi|318069390|gb|ADV37682.1| paralytic, isoform E [Drosophila melanogaster]
Length = 2108
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1339 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1398
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1399 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1433
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1649 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1708
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1709 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1747
>gi|320542212|ref|NP_001188643.1| paralytic, isoform AV [Drosophila melanogaster]
gi|318069433|gb|ADV37725.1| paralytic, isoform AV [Drosophila melanogaster]
Length = 1117
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 787 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 846
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 847 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 887
>gi|320542158|ref|NP_001188616.1| paralytic, isoform U [Drosophila melanogaster]
gi|318069406|gb|ADV37698.1| paralytic, isoform U [Drosophila melanogaster]
Length = 2118
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1349 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
>gi|320542148|ref|NP_001188611.1| paralytic, isoform P [Drosophila melanogaster]
gi|318069401|gb|ADV37693.1| paralytic, isoform P [Drosophila melanogaster]
Length = 2121
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1352 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1411
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1412 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1446
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1662 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1721
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1722 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1760
>gi|195132819|ref|XP_002010837.1| GI21488 [Drosophila mojavensis]
gi|193907625|gb|EDW06492.1| GI21488 [Drosophila mojavensis]
Length = 2168
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1700 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1759
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1760 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1798
>gi|403443|gb|AAB59191.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2123
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 862 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 922 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 962
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1664 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1723
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1724 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1762
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
Y W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1354 YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1413
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1414 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1448
>gi|395519671|ref|XP_003763966.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 5
[Sarcophilus harrisii]
Length = 1947
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 769 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 828
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K AP+
Sbjct: 829 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPN 868
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1535 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1594
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|320542178|ref|NP_001188626.1| paralytic, isoform AE [Drosophila melanogaster]
gi|318069416|gb|ADV37708.1| paralytic, isoform AE [Drosophila melanogaster]
Length = 2108
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1339 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1398
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1399 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1433
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1649 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1708
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1709 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1747
>gi|320542170|ref|NP_001188622.1| paralytic, isoform AA [Drosophila melanogaster]
gi|320542174|ref|NP_001188624.1| paralytic, isoform AC [Drosophila melanogaster]
gi|318069412|gb|ADV37704.1| paralytic, isoform AA [Drosophila melanogaster]
gi|318069414|gb|ADV37706.1| paralytic, isoform AC [Drosophila melanogaster]
Length = 2084
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 846 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 905
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 906 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 946
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1315 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1374
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1375 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1409
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1625 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1684
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1685 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1723
>gi|320542162|ref|NP_001188618.1| paralytic, isoform W [Drosophila melanogaster]
gi|318069408|gb|ADV37700.1| paralytic, isoform W [Drosophila melanogaster]
Length = 2102
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 841 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 900
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 901 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 941
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1333 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1392
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1393 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1427
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1643 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1702
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1703 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1741
>gi|403445|gb|AAB59193.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2118
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1659 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1718
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1719 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1757
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
Y W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1349 YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1408
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1409 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1443
>gi|320542228|ref|NP_001188651.1| paralytic, isoform BD [Drosophila melanogaster]
gi|318069441|gb|ADV37733.1| paralytic, isoform BD [Drosophila melanogaster]
Length = 2056
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1597 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1656
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1657 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1695
>gi|320542216|ref|NP_001188645.1| paralytic, isoform AX [Drosophila melanogaster]
gi|318069435|gb|ADV37727.1| paralytic, isoform AX [Drosophila melanogaster]
Length = 2099
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 851 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 910
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 911 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 951
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1330 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1389
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1390 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1424
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1640 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1699
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1700 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1738
>gi|320542224|ref|NP_001188649.1| paralytic, isoform BB [Drosophila melanogaster]
gi|318069439|gb|ADV37731.1| paralytic, isoform BB [Drosophila melanogaster]
Length = 2066
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1607 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1666
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1667 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1705
>gi|320542188|ref|NP_001188631.1| paralytic, isoform AJ [Drosophila melanogaster]
gi|318069421|gb|ADV37713.1| paralytic, isoform AJ [Drosophila melanogaster]
Length = 2132
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1363 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1422
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1423 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1457
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1673 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1732
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1733 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1771
>gi|320542160|ref|NP_001188617.1| paralytic, isoform V [Drosophila melanogaster]
gi|318069407|gb|ADV37699.1| paralytic, isoform V [Drosophila melanogaster]
Length = 2097
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 909 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 949
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1328 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1387
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1388 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1422
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1638 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1697
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1698 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1736
>gi|320542200|ref|NP_001188637.1| paralytic, isoform AP [Drosophila melanogaster]
gi|318069427|gb|ADV37719.1| paralytic, isoform AP [Drosophila melanogaster]
Length = 2097
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 909 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 949
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1328 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1387
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1388 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1422
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1638 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1697
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1698 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1736
>gi|320542180|ref|NP_001188627.1| paralytic, isoform AF [Drosophila melanogaster]
gi|318069417|gb|ADV37709.1| paralytic, isoform AF [Drosophila melanogaster]
Length = 2110
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1341 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1400
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1401 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1435
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1651 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1710
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1711 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1749
>gi|320542144|ref|NP_001188609.1| paralytic, isoform N [Drosophila melanogaster]
gi|318069399|gb|ADV37691.1| paralytic, isoform N [Drosophila melanogaster]
Length = 2100
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 909 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 949
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
>gi|320542130|ref|NP_001188602.1| paralytic, isoform G [Drosophila melanogaster]
gi|318069392|gb|ADV37684.1| paralytic, isoform G [Drosophila melanogaster]
Length = 2087
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 909 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 949
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1318 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1377
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1378 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1412
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1628 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1687
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1688 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1726
>gi|403442|gb|AAB59190.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2110
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 849 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 908
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 909 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 949
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1651 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1710
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1711 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1749
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
Y W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1341 YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1400
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1401 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1435
>gi|320542210|ref|NP_001188642.1| paralytic, isoform AU [Drosophila melanogaster]
gi|318069432|gb|ADV37724.1| paralytic, isoform AU [Drosophila melanogaster]
Length = 1125
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 795 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 854
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 855 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 895
>gi|149022133|gb|EDL79027.1| rCG26977, isoform CRA_b [Rattus norvegicus]
Length = 1347
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 907
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD-----GLSVLRGLRLSWTT-----MKVLLSIIISTIGA 61
WN D V+T + V TEFVD L R LR T +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|449491396|ref|XP_004175478.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Taeniopygia guttata]
Length = 1854
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 678 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 737
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 738 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 768
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1435 ALRHYFFTVGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 1494
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1495 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1534
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + + L LR LR + M+V+++
Sbjct: 1121 YFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1180
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1181 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1215
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 197 WNWLDFMVISMAYI---TEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 253
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 254 LSDVMILTVFCLSVFALIGLQLF 276
>gi|403446|gb|AAB59194.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2121
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1662 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1721
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1722 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1760
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
Y W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1352 YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1411
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1412 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1446
>gi|342837661|tpg|DAA34920.1| TPA_inf: voltage-dependent sodium channel SCN4A [Monodelphis
domestica]
Length = 1815
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 781 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGN 840
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 841 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 873
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1390 ALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGA 1449
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1450 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1489
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 186 WNWLDFSVI---MMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 242
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 243 LSDVMILTVFCLSVFALIGLQLF 265
>gi|320542186|ref|NP_001188630.1| paralytic, isoform AI [Drosophila melanogaster]
gi|318069420|gb|ADV37712.1| paralytic, isoform AI [Drosophila melanogaster]
Length = 2086
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1317 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1376
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1377 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1411
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1627 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1686
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1687 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1725
>gi|320542150|ref|NP_001188612.1| paralytic, isoform Q [Drosophila melanogaster]
gi|318069402|gb|ADV37694.1| paralytic, isoform Q [Drosophila melanogaster]
Length = 2076
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1307 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|24642537|ref|NP_523371.2| paralytic, isoform A [Drosophila melanogaster]
gi|150421666|sp|P35500.3|SCNA_DROME RecName: Full=Sodium channel protein para; AltName: Full=Protein
paralytic; AltName: Full=Sodium channel 1; Short=DmNav1
gi|22832381|gb|AAF48617.2| paralytic, isoform A [Drosophila melanogaster]
Length = 2131
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|320542208|ref|NP_001188641.1| paralytic, isoform AT [Drosophila melanogaster]
gi|318069431|gb|ADV37723.1| paralytic, isoform AT [Drosophila melanogaster]
Length = 2056
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 795 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 854
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 855 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 895
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1287 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1346
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1347 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1381
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1597 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1656
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1657 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1695
>gi|320542134|ref|NP_001188604.1| paralytic, isoform I [Drosophila melanogaster]
gi|318069394|gb|ADV37686.1| paralytic, isoform I [Drosophila melanogaster]
Length = 2079
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 841 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 900
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 901 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 941
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1310 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1369
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1370 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1404
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1620 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1679
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1680 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1718
>gi|320542218|ref|NP_001188646.1| paralytic, isoform AY [Drosophila melanogaster]
gi|318069436|gb|ADV37728.1| paralytic, isoform AY [Drosophila melanogaster]
Length = 2132
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1363 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1422
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1423 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1457
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1673 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1732
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1733 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1771
>gi|320542220|ref|NP_001188647.1| paralytic, isoform AZ [Drosophila melanogaster]
gi|318069437|gb|ADV37729.1| paralytic, isoform AZ [Drosophila melanogaster]
Length = 2111
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1342 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1401
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1402 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1436
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1652 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1711
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1712 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1750
>gi|320542194|ref|NP_001188634.1| paralytic, isoform AM [Drosophila melanogaster]
gi|318069424|gb|ADV37716.1| paralytic, isoform AM [Drosophila melanogaster]
Length = 2083
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 835 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 894
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 895 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 935
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1314 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1373
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1374 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1408
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1624 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1683
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1684 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1722
>gi|320542176|ref|NP_001188625.1| paralytic, isoform AD [Drosophila melanogaster]
gi|318069415|gb|ADV37707.1| paralytic, isoform AD [Drosophila melanogaster]
Length = 2086
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1317 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1376
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1377 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1411
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1627 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1686
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1687 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1725
>gi|116007170|ref|NP_001036280.1| paralytic, isoform B [Drosophila melanogaster]
gi|113193612|gb|ABI30985.1| paralytic, isoform B [Drosophila melanogaster]
Length = 2131
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-----------EFVDGLSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++L + L LR LR W MKV+++
Sbjct: 1362 YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|403447|gb|AAB59195.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2131
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
Y W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
>gi|311698105|gb|ADQ00347.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Osteoglossum bicirrhosum]
Length = 971
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 128
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 803 ALRQYFFTIGWNIFDFVVVILSVLGIMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGA 862
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 863 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 902
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 489 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 548
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + TSE+ P
Sbjct: 549 ALVGAILSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTSEERLP 596
>gi|348506762|ref|XP_003440926.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 2079
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 876 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 935
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 936 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 967
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGL----SVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V + ++E ++ ++ R +RL+
Sbjct: 1658 ISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKG 1717
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1718 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1758
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1347 YFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVN 1406
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1407 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1441
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 253 WNWLDFSVI---LMAYVTEFVDVGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 309
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 310 LSDVMILTVFCLSVFALIGLQLF 332
>gi|320542206|ref|NP_001188640.1| paralytic, isoform AS [Drosophila melanogaster]
gi|318069430|gb|ADV37722.1| paralytic, isoform AS [Drosophila melanogaster]
Length = 2067
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 816 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 875
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 876 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 916
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1298 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1357
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1358 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1392
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1608 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1667
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1668 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1706
>gi|320542182|ref|NP_001188628.1| paralytic, isoform AG [Drosophila melanogaster]
gi|318069418|gb|ADV37710.1| paralytic, isoform AG [Drosophila melanogaster]
Length = 2089
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 838 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 897
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 898 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 938
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1320 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1379
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1380 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1414
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1630 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1689
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1690 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1728
>gi|311698125|gb|ADQ00357.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Petrocephalus soudanensis]
Length = 960
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 128
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 792 ALRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGA 851
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 852 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 891
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 477 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 536
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + TSE+ P V
Sbjct: 537 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNMTSEELFPTDV 587
>gi|195351464|ref|XP_002042254.1| GM13396 [Drosophila sechellia]
gi|194124097|gb|EDW46140.1| GM13396 [Drosophila sechellia]
Length = 1674
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 859 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 918
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 919 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 959
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1351 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1410
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1411 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1445
>gi|87128436|gb|ABD22983.1| Nav1.4a [Apteronotus leptorhynchus]
Length = 781
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 28 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 87
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 88 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 118
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V S++ L + L LR LR + M+V+++
Sbjct: 452 YFTNAWCWLDFLIVDVSIISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 511
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 512 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELLP 559
>gi|311698143|gb|ADQ00366.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Apteronotus leptorhynchus]
Length = 903
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 8 YFQVGWNIFDSIIVTMSLMELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNS 67
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 68 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 98
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 432 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 491
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 492 ALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 526
>gi|320542214|ref|NP_001188644.1| paralytic, isoform AW [Drosophila melanogaster]
gi|318069434|gb|ADV37726.1| paralytic, isoform AW [Drosophila melanogaster]
Length = 2062
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 814 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 873
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 874 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 914
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1293 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1352
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1353 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1387
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1603 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1662
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1663 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1701
>gi|195479236|ref|XP_002100817.1| GE15966 [Drosophila yakuba]
gi|194188341|gb|EDX01925.1| GE15966 [Drosophila yakuba]
Length = 1885
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1703 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1762
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1763 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1801
>gi|311698097|gb|ADQ00343.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Apteronotus albifrons]
Length = 934
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 127
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWT---------- 46
AL +F GWN+FD IVV S L D++ ++ ++ R +RL+ T
Sbjct: 775 ALRQYFFTVGWNVFDFIVVILSIAGLLLSDIIEKYFVSPTLFRVIRLARTGRVLRLIRGA 834
Query: 47 -TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 835 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 874
>gi|311698067|gb|ADQ00328.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Paramormyrops sp. 'magnostipes' type I morph]
gi|311698069|gb|ADQ00329.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Paramormyrops sp. 'magnostipes' type II morph]
Length = 967
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V S+++++ V+GLSVLR RL SW T+ +LL II ++
Sbjct: 37 YFQVGWNVFDSIIVVMSMLEMLLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLRIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLFSK+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFSKNYK 127
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + D++ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSVASMLVADIIEKYFVSPTLFRVVRLARIGRILRLVRG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAANIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ + A+ N+ V +I IF+++G+ LF+ + T E F D V
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFAGTFYHCVNTTTGEMFTIDVV 597
>gi|444726987|gb|ELW67497.1| Sodium channel protein type 4 subunit alpha [Tupaia chinensis]
Length = 1582
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD +VT SLV+L V GLSVLR RL SW T+ +L+ II +
Sbjct: 573 EYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 632
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 633 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 664
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1393 LALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRG 1452
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1453 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA 1493
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 131 WNWLDFSVI---LMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 187
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 188 LSDVMILTVFCLSVFALVGLQLF 210
>gi|426337574|ref|XP_004032776.1| PREDICTED: sodium channel protein type 1 subunit alpha [Gorilla
gorilla gorilla]
Length = 1964
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1548 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1607
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1608 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1648
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1234 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1293
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1294 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1328
>gi|4559259|gb|AAD22957.1| voltage-sensitive sodium channel [Leptinotarsa decemlineata]
Length = 1087
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 605 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 664
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 665 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFLDHELP 707
>gi|311698123|gb|ADQ00356.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Myomyrus macrops]
Length = 958
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 128
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 790 ALRQYFFSVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 849
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 850 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 889
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 475 YFTNAWCWLDFLIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 534
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E+F D V
Sbjct: 535 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCLNVTTEERFTLDVV 586
>gi|74004474|ref|XP_535941.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Canis lupus familiaris]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|311698099|gb|ADQ00344.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Apteronotus leptorhynchus]
Length = 927
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 21 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 80
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 81 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 111
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWN+FD IVV S L D++ ++ ++ R +RL+
Sbjct: 759 ALRQYFFTVGWNVFDFIVVILSIAGLLLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 818
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 819 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 858
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V S++ L + L LR LR + M+V+++
Sbjct: 445 YFTNAWCWLDFLIVDVSIISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 504
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 505 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELLP 552
>gi|149022137|gb|EDL79031.1| rCG26308, isoform CRA_a [Rattus norvegicus]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|13540709|ref|NP_110502.1| sodium channel protein type 1 subunit alpha [Rattus norvegicus]
gi|116447|sp|P04774.1|SCN1A_RAT RecName: Full=Sodium channel protein type 1 subunit alpha; AltName:
Full=Sodium channel protein brain I subunit alpha;
AltName: Full=Sodium channel protein type I subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.1
gi|57217|emb|CAA27286.1| unnamed protein product [Rattus norvegicus]
gi|1041089|gb|AAA79965.1| Na+ channel [Rattus norvegicus]
gi|224959|prf||1204264A Na channel I protein
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|311698063|gb|ADQ00326.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Paramormyrops sp. 'magnostipes' type I morph]
gi|311698065|gb|ADQ00327.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Paramormyrops sp. 'magnostipes' type III morph]
Length = 967
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V S+++++ V+GLSVLR RL SW T+ +LL II ++
Sbjct: 37 YFQVGWNVFDSIIVVMSMLEMLLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLRIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLFSK+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFAVVGMQLFSKNYKD 128
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + D++ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFIVVIFSVASMLVADIIEKYFVSPTLFRVVRLARIGRILRLVRG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAANIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ + A+ N+ V +I IF+++G+ LF+ + T E F D V
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFAGTFYHCVNTTTGEMFTIDVV 597
>gi|74004470|ref|XP_858797.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Canis lupus familiaris]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|291391665|ref|XP_002712295.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 1 [Oryctolagus cuniculus]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|125630315|ref|NP_061203.2| sodium channel, voltage-gated, type I, alpha [Mus musculus]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|74004472|ref|XP_858834.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Canis lupus familiaris]
Length = 1981
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|354487354|ref|XP_003505838.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|291391667|ref|XP_002712296.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 2 [Oryctolagus cuniculus]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|195447454|ref|XP_002071221.1| GK25247 [Drosophila willistoni]
gi|194167306|gb|EDW82207.1| GK25247 [Drosophila willistoni]
Length = 2201
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 877 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 936
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 937 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1717 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1776
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1777 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1815
>gi|354487356|ref|XP_003505839.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|297264202|ref|XP_002798937.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1986
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 805 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 864
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 865 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 894
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1571 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1630
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1631 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1671
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1257 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1317 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1351
>gi|390464438|ref|XP_003733221.1| PREDICTED: sodium channel protein type 1 subunit alpha [Callithrix
jacchus]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|410968773|ref|XP_003990874.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 1
subunit alpha [Felis catus]
Length = 2008
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 826 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 886 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 915
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1592 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1651
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1692
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1278 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1337
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1338 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1372
>gi|410929251|ref|XP_003978013.1| PREDICTED: sodium channel protein type 2 subunit alpha-like,
partial [Takifugu rubripes]
Length = 2020
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 824 YFQTGWNIFDSIIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNS 883
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 884 MGALGNLTLVLAIIVFIFAVVGMQLFGKNY 913
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1577 ALRYYFFTVGWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRGA 1636
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1637 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1676
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 236 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 292
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 293 LADVMILTVFCLSVFALIGLQLF 315
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLR-----LSWTTMKVL 51
YF W D ++V SL+ L+ ++F + L LR LR + M+V+
Sbjct: 1262 KKYFTNYWCWLDFLIVDVSLISLVANTLGYSDFAAIKSLRTLRALRPLRALSRFEGMRVV 1321
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1322 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1358
>gi|403258867|ref|XP_003921964.1| PREDICTED: sodium channel protein type 1 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|311698117|gb|ADQ00353.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Mormyrus rume]
Length = 957
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKGY 126
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 789 ALRQYFFSVGWNIFDFVVVILSIIGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 848
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 849 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 888
>gi|12642270|gb|AAK00217.1|AF225985_1 voltage-gated sodium channel alpha subunit SCN1A [Homo sapiens]
Length = 1999
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1583 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1642
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|380792755|gb|AFE68253.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 970
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 907
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
>gi|109099926|ref|XP_001101115.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Macaca mulatta]
Length = 1997
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|431894868|gb|ELK04661.1| Sodium channel protein type 1 subunit alpha [Pteropus alecto]
Length = 1943
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 803 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 862
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 863 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 892
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1527 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1586
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1587 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1627
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 198 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 254
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 255 LSDVMILTVFCLSVFALIGLQLF 277
>gi|338715737|ref|XP_001916728.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 1
subunit alpha [Equus caballus]
Length = 2010
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 828 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 887
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 888 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 917
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1594 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1653
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1654 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1694
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
>gi|297668755|ref|XP_002812591.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Pongo abelii]
Length = 2009
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|115583677|ref|NP_008851.3| sodium channel protein type 1 subunit alpha isoform 2 [Homo
sapiens]
gi|62420265|gb|AAX81984.1| unknown [Homo sapiens]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|291391669|ref|XP_002712297.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 3 [Oryctolagus cuniculus]
Length = 1981
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|113675822|ref|NP_001038588.1| sodium channel, voltage gated, type XII, alpha b [Danio rerio]
gi|76786323|gb|ABA54923.1| voltage-gated sodium channel type V alpha subunit Nav1.5Lb [Danio
rerio]
Length = 1954
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 765 YFQQGWNIFDSLIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 824
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 825 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 854
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1520 IALRCYFFTVSWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRG 1579
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1580 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1620
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ ++F + L LR LR + M+V+
Sbjct: 1207 RKYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALRPLRALSRFEGMRVV 1266
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1267 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1303
>gi|15421162|gb|AAK95360.1| voltage-gated sodium channel type I [Homo sapiens]
gi|23978422|dbj|BAC21102.1| Voltage-gated sodium channel alpha1 subunit [Homo sapiens]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|426220973|ref|XP_004004686.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 5
[Ovis aries]
Length = 1956
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 904
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1540 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1599
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1600 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1640
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|426220965|ref|XP_004004682.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Ovis aries]
Length = 1998
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|354487352|ref|XP_003505837.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 1981
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|301786474|ref|XP_002928652.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1997
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 904
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1581 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1640
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1641 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1681
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|297264207|ref|XP_002798939.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1917
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 766 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 825
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 826 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 855
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|296204652|ref|XP_002749420.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Callithrix jacchus]
Length = 1981
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|296490593|tpg|DAA32706.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 3
[Bos taurus]
Length = 1981
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|354487350|ref|XP_003505836.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 1956
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 774 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 833
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 834 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 863
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1540 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1599
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1600 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1640
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1226 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1285
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1286 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1320
>gi|301786472|ref|XP_002928651.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2008
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 826 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 886 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 915
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1592 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1651
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1692
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1278 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1337
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1338 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1372
>gi|296204650|ref|XP_002749419.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Callithrix jacchus]
Length = 1998
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|260166633|ref|NP_001159435.1| sodium channel protein type 1 subunit alpha isoform 1 [Homo
sapiens]
gi|320461722|ref|NP_001189364.1| sodium channel protein type 1 subunit alpha isoform 1 [Homo
sapiens]
gi|12644229|sp|P35498.2|SCN1A_HUMAN RecName: Full=Sodium channel protein type 1 subunit alpha; AltName:
Full=Sodium channel protein brain I subunit alpha;
AltName: Full=Sodium channel protein type I subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.1
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|300794327|ref|NP_001180147.1| sodium channel protein type 1 subunit alpha [Bos taurus]
gi|296490592|tpg|DAA32705.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 2
[Bos taurus]
Length = 1998
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|297264205|ref|XP_002798938.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1956
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1541 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1600
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|1783373|gb|AAB47604.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2105
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 855 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 914
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 915 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 955
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRL-----------SWTTMKVLLS 53
YF W D ++V SL++L+ + ++ ++V R +R W MKV+++
Sbjct: 1350 YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALRPLRAVSRWEGMKVVVN 1409
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ I ++ N+ V +I IFA++G+QLF+ Y K D V
Sbjct: 1410 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGNDTV 1454
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1660 ALRYHYFKEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1719
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1720 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1758
>gi|332234086|ref|XP_003266239.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Nomascus leucogenys]
gi|441648951|ref|XP_003266240.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Nomascus leucogenys]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|297264209|ref|XP_002798940.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1929
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 766 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 825
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 826 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 855
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1514 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1573
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1574 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1614
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|109099928|ref|XP_001100928.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Macaca mulatta]
Length = 1980
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|296490591|tpg|DAA32704.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 1
[Bos taurus]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|397507777|ref|XP_003824363.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Pan paniscus]
gi|397507779|ref|XP_003824364.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Pan paniscus]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|355750586|gb|EHH54913.1| hypothetical protein EGM_04020 [Macaca fascicularis]
Length = 2008
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|332814609|ref|XP_003309330.1| PREDICTED: sodium channel protein type 1 subunit alpha [Pan
troglodytes]
gi|410035829|ref|XP_001154262.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Pan troglodytes]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|109099924|ref|XP_001101023.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Macaca mulatta]
gi|402888526|ref|XP_003907609.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Papio anubis]
gi|402888528|ref|XP_003907610.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Papio anubis]
Length = 2008
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|1550781|emb|CAA65448.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2108
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 855 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 914
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 915 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 955
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRL-----------SWTTMKVLLS 53
YF W D ++V SL++L+ + ++ ++V R +R W MKV+++
Sbjct: 1350 YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALRPLRAVSRWEGMKVVVN 1409
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ I ++ N+ V +I IFA++G+QLF+ Y K D V
Sbjct: 1410 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGNDTV 1454
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1660 ALRYHYFKEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1719
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1720 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1758
>gi|426220967|ref|XP_004004683.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Ovis aries]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|301786476|ref|XP_002928653.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1980
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 798 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 857
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 858 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 887
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1564 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1623
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1624 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1664
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1250 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1309
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1310 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1344
>gi|281345252|gb|EFB20836.1| hypothetical protein PANDA_018637 [Ailuropoda melanoleuca]
Length = 2028
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 834 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 893
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 894 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 923
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1612 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1671
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1672 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1712
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 198 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 254
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 255 LSDVMILTVFCLSVFALIGLQLF 277
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1286 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1345
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1346 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1380
>gi|112494927|gb|ABI20136.1| cardiac voltage-gated sodium channel alpha subunit Nav1.5 [Danio
rerio]
Length = 1954
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 765 YFQQGWNIFDSLIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 824
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 825 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 854
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1520 IALRCYFFTVSWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRG 1579
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1580 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1620
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ ++F + L LR LR + M+V+
Sbjct: 1207 RKYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALRPLRALSRFEGMRVV 1266
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1267 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1303
>gi|23978418|dbj|BAC21101.1| voltage-gated sodium channel alpha1 subunit [Homo sapiens]
Length = 2009
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|149022138|gb|EDL79032.1| rCG26308, isoform CRA_b [Rattus norvegicus]
gi|149022139|gb|EDL79033.1| rCG26308, isoform CRA_b [Rattus norvegicus]
Length = 1878
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 696 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 755
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 756 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 785
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1462 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1521
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1522 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1562
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1148 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1207
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1208 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1242
>gi|56548475|gb|AAV93244.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2104
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 855 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 914
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 915 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 955
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRL-----------SWTTMKVLLS 53
YF W D ++V SL++L+ + ++ ++V R +R W MKV+++
Sbjct: 1350 YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALRPLRAVSRWEGMKVVVN 1409
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ I ++ N+ V +I IFA++G+QLF+ Y K D V
Sbjct: 1410 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGNDSV 1454
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1660 ALRYHYFKEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1719
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1720 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1758
>gi|432098368|gb|ELK28168.1| Sodium channel protein type 3 subunit alpha [Myotis davidii]
Length = 1753
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 672 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 731
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 732 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 763
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1337 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1396
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1397 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1431
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1119 YFTNAWCWLDFLIVDVSLVSLVATALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1178
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1179 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1213
>gi|426220969|ref|XP_004004684.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Ovis aries]
Length = 1981
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|260166635|ref|NP_001159436.1| sodium channel protein type 1 subunit alpha isoform 3 [Homo
sapiens]
Length = 1981
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|27263190|dbj|BAC45228.1| Voltage-gated sodium channel alpha 1 subunit [Homo sapiens]
Length = 1981
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|426220971|ref|XP_004004685.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Ovis aries]
Length = 1949
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 767 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 826
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 827 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 856
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1533 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1592
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1593 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1633
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
>gi|148695063|gb|EDL27010.1| mCG13194 [Mus musculus]
Length = 1923
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 742 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 801
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 802 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 831
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1507 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1566
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1567 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1607
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 105 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 161
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 162 LSDVMILTVFCLSVFALIGLQLF 184
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1194 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1253
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1254 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1288
>gi|1842214|gb|AAB47605.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2104
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 855 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 914
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 915 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 955
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--EFVDGLSVLRGLRL-----------SWTTMKVLLS 53
YF W D ++V SL++L+ ++ ++V R +R W MKV+++
Sbjct: 1350 YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALRPLRAVSRWEGMKVVVN 1409
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ I ++ N+ V +I IFA++G+QLF+ Y K D V
Sbjct: 1410 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGNDTV 1454
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1660 ALRYHYFKEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1719
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1720 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1758
>gi|301614640|ref|XP_002936795.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1953
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 814 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 873
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 874 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 905
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1330 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1364
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|119631724|gb|EAX11319.1| sodium channel, voltage-gated, type I, alpha, isoform CRA_b [Homo
sapiens]
Length = 1877
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 696 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 755
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 756 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 785
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1461 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1520
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1521 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1561
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1148 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1207
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1208 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1242
>gi|348539053|ref|XP_003457004.1| PREDICTED: sodium channel protein type 3 subunit alpha [Oreochromis
niloticus]
Length = 1990
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 839 MGALGNLTLVLAIIVFIFAVVGMQLFGKNYQE 870
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
MAL +F GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1532 MALRCYFFTVGWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRG 1591
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1592 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1632
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTE--------FVDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1218 KKYFTNYWCWLDFLIVDVSLISLVANTLGYSDLAAIKSLRTLRALRPLRALSRFEGMRVV 1277
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1314
>gi|432850092|ref|XP_004066709.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oryzias latipes]
Length = 2009
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 807 YFQQGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 866
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K Y K
Sbjct: 867 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEFK 900
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGL----SVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V + ++E ++ ++ R +RL+
Sbjct: 1589 ISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKG 1648
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1689
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1277 YFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVN 1336
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y T+E+ P
Sbjct: 1337 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCINTTTEEMFP 1384
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
+ Q WN D V+ L+ +TEFVD +S LR R+ +K ++ +I
Sbjct: 184 FLQDPWNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI 240
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA+IG+QLF
Sbjct: 241 QSVKKLSDVMILTVFCLSVFALIGLQLF 268
>gi|431894862|gb|ELK04655.1| Sodium channel protein type 3 subunit alpha [Pteropus alecto]
Length = 1930
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 796 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 855
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 856 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 887
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1514 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1573
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1574 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1608
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1244 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1304 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1338
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 167 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 223
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 224 LSDVMILTVFCLSVFALIGLQLF 246
>gi|311698101|gb|ADQ00345.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Xenomystus nigri]
Length = 964
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLSMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKTYKD 128
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWN+FD +VV S L D++ ++ ++ R +RL+
Sbjct: 808 ALRQYFFTSGWNVFDFVVVILSIAGIMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGA 867
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 868 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 907
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D +V SL+ L + L LR LR + M+V+++
Sbjct: 494 YFTNAWCWLDFFIVDVSLISLTANLMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 553
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 554 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEEILP 601
>gi|344268022|ref|XP_003405863.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Loxodonta africana]
Length = 2009
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 886
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 916
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1593 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1652
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1693
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1279 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1338
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1339 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
>gi|344268026|ref|XP_003405865.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Loxodonta africana]
Length = 1998
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1582 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1641
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1682
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|119631723|gb|EAX11318.1| sodium channel, voltage-gated, type I, alpha, isoform CRA_a [Homo
sapiens]
Length = 1866
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 685 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 744
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 745 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 774
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1450 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1509
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1510 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1550
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1137 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1196
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1197 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1231
>gi|311698103|gb|ADQ00346.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a [Chitala
chitala]
Length = 974
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKTYKD 128
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + +F GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 806 ALRHYFFTIGWNIFDFVVVILSIAGIMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGA 865
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL ++ +L ++++IF++ GM F+
Sbjct: 866 KGIRTLLFALMMSLPALFSIRLLLFLIMFIFSIFGMSNFA 905
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 492 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 551
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 552 ALVGAILSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELLP 599
>gi|311698145|gb|ADQ00367.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Xenomystus nigri]
Length = 932
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVSLSLVELGLANVEGLSVLRSFRLLRVFKLARSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 97 VGALGNLTLVLGIIVFIFAVVGMQLFGKNYK 127
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S L D++ ++ ++ R +RL+
Sbjct: 774 IALRQHFFTVGWNVFDFIVVVLSIAGILLADIIEKYFVSPTLFRVIRLARIGRVLRLIRG 833
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 834 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 874
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 460 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 519
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F D V
Sbjct: 520 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFQYCLNTTTEELFLSDEV 571
>gi|390464462|ref|XP_002749444.2| PREDICTED: sodium channel protein type 3 subunit alpha [Callithrix
jacchus]
Length = 1979
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 798 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 857
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 858 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 889
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1558 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1617
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1618 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1657
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1246 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1305
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1306 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1340
>gi|395844939|ref|XP_003795205.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Otolemur garnettii]
Length = 2013
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 826 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 886 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 915
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1591 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1650
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1651 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1277 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1336
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1337 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1371
>gi|344268028|ref|XP_003405866.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
4 [Loxodonta africana]
Length = 1981
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 799 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 859 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 888
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1565 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1624
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1665
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1251 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1310
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1311 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1345
>gi|311698147|gb|ADQ00368.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b [Chitala
chitala]
Length = 880
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V+GL VLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTLSLVELGLASVEGLPVLRSFRLLRVFKLARSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 126
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 782 LALRQYYFTVGWNIFDFVVVILSIVGIMLADLIEKYFVSPTLFRVIRLARIGRILRLIRG 841
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGM 81
++ LL ++ ++ AL N+ +L ++++IF++ GM
Sbjct: 842 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGM 878
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 467 YFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 526
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ V
Sbjct: 527 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTEEYFSTKEV 578
>gi|311698121|gb|ADQ00355.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Mormyrops anguilloides]
Length = 917
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW + +L+ II ++
Sbjct: 13 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPALNMLIKIIGNS 72
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 73 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 103
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 765 ALRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGA 824
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++++IF++ M F
Sbjct: 825 EGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFXMSNF 863
>gi|431910581|gb|ELK13649.1| Sodium channel protein type 5 subunit alpha [Pteropus alecto]
Length = 1142
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 789 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 848
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 849 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYS 879
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL--------SWTTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 206 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 262
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 263 LADVMVLTVFCLSVFALIGLQLF 285
>gi|403258881|ref|XP_003921970.1| PREDICTED: sodium channel protein type 3 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1999
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1578 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1637
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1638 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
>gi|348585685|ref|XP_003478601.1| PREDICTED: sodium channel protein type 1 subunit alpha-like [Cavia
porcellus]
Length = 1957
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 816 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 875
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 876 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1541 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1600
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|327277936|ref|XP_003223719.1| PREDICTED: sodium channel protein type 1 subunit alpha-like [Anolis
carolinensis]
Length = 1973
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 796 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 855
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 856 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 887
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1565 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1624
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1625 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1659
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 157 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 213
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 214 LSDVMILTVFCLSVFALIGLQLF 236
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1245 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1304
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1305 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1339
>gi|1657986|gb|AAC47484.1| para sodium channel [Blattella germanica]
Length = 2031
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 841 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 900
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y E+F +P
Sbjct: 901 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYYDNVERFPDGDMP 943
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFIIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
>gi|410897034|ref|XP_003962004.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Takifugu rubripes]
Length = 1950
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SL++L V G+SVLR RL SW T+ L+ II ++
Sbjct: 779 YFQTGWNIFDGIIVTLSLMELFLANVVGMSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL IV++IFAV+GMQLF K+Y
Sbjct: 839 VGALGNLTLVLAIVVFIFAVVGMQLFGKNY 868
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRL-----------S 44
++L + +F GWNIFD IVV S++ +L+ + ++ R +RL S
Sbjct: 1539 ISLRHYFFTNGWNIFDFIVVILSIIGVFLSELIENYFVSPTLFRVIRLARIGRVLRLIKS 1598
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1599 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1639
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR + M+V+++
Sbjct: 1226 YFTNAWCWLDFLIVDVSLISLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1285
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T++ F P V
Sbjct: 1286 ALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFRMCIRRTTNQPFLPTEV 1337
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFV+ SVLR R+ +K ++S + ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVNLGNFSVLRTFRVLRAFKAISVIPGLKTIVSALFQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LADVMILTVFCLSVFALIGLQLF 269
>gi|395732415|ref|XP_002812578.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha [Pongo abelii]
Length = 1993
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|1657984|gb|AAC47483.1| para sodium channel [Blattella germanica]
Length = 2031
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 841 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 900
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y E+F +P
Sbjct: 901 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYYDNVERFPDGDMP 943
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1641 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1739
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + V L LR LR M+V+++
Sbjct: 1331 YFTNAWCWLDFIIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1390
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1391 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1425
>gi|12642274|gb|AAK00219.1|AF225987_1 voltage-gated sodium channel alpha subunit SCN3A [Homo sapiens]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGLSV----LRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V + + E ++ SV R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYSVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|345328157|ref|XP_001513457.2| PREDICTED: sodium channel protein type 3 subunit alpha
[Ornithorhynchus anatinus]
Length = 1950
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1528 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1587
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1588 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1628
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1273 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1332
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1333 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1367
>gi|224054924|ref|XP_002197542.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Taeniopygia guttata]
Length = 2011
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 823 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 882
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 883 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 914
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1590 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1649
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1690
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1276 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1335
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1336 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|109099886|ref|XP_001099096.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Macaca mulatta]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|25014054|sp|Q9NY46.2|SCN3A_HUMAN RecName: Full=Sodium channel protein type 3 subunit alpha; AltName:
Full=Sodium channel protein brain III subunit alpha;
AltName: Full=Sodium channel protein type III subunit
alpha; AltName: Full=Voltage-gated sodium channel
subtype III; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.3
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|1633648|gb|AAB82037.1| para-type sodium channel, partial [Blattella germanica]
Length = 1689
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 633 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 692
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y E+F +P
Sbjct: 693 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYYDNVERFPDGDMP 735
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1433 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1492
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1493 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1531
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + V L LR LR M+V+++
Sbjct: 1123 YFTNAWCWLDFIIVMVSLINFVATLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1182
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1183 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1217
>gi|395844941|ref|XP_003795206.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Otolemur garnettii]
Length = 2002
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 904
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1580 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1639
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1640 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1680
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|344268024|ref|XP_003405864.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Loxodonta africana]
Length = 1948
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 766 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 825
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 826 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 855
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1532 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1591
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1592 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1632
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|126362949|ref|NP_008853.3| sodium channel protein type 3 subunit alpha isoform 1 [Homo
sapiens]
gi|62822524|gb|AAY15072.1| unknown [Homo sapiens]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|301783107|ref|XP_002926969.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
5 [Ailuropoda melanoleuca]
Length = 1989
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 808 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 867
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 868 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 899
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1573 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1632
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1633 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1667
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1350
>gi|114581463|ref|XP_001152748.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 9
[Pan troglodytes]
gi|397500550|ref|XP_003820973.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Pan paniscus]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|395844943|ref|XP_003795207.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Otolemur garnettii]
Length = 1985
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 798 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 857
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 858 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 887
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1563 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1622
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1623 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1663
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1249 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1308
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1309 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1343
>gi|343098398|tpg|DAA34930.1| TPA_inf: voltage-dependent sodium channel SCN1A [Anolis
carolinensis]
Length = 1922
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 746 YFQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 805
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 806 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 837
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1514 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1573
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1574 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1608
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 102 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 158
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 159 LSDVMILTVFCLSVFALIGLQLF 181
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1195 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1254
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1255 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1289
>gi|56130944|gb|AAQ84279.2| voltage-gated sodium channel protein [Mesobuthus martensii]
Length = 1871
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 12/105 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL--------SWTTMKVLLSIII 56
YF+ GWNIFD ++V SLV+L E V GLSVLR RL SW T+ +L+SI+
Sbjct: 663 YFKEGWNIFDFLIVVLSLVELCGENVSLPGLSVLRSFRLLRVFKLAKSWPTLNLLISIMG 722
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDPVP 99
T+GALGNLTFVL I+I+IFAV+GMQLF + Y K F + VP
Sbjct: 723 KTVGALGNLTFVLGIIIFIFAVMGMQLFGEKYIENKHVFPDNAVP 767
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL +L + G L LR LR M+V+++
Sbjct: 1185 YFTNAWCWLDFVIVLVSLFNLAVSLMGGSDISAFKTMRTLRALRPLRAMSRLEGMRVVVN 1244
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS------KDYTSEKFAPDPVP 99
++ I A+ N+ V +I IF+++G+QLF+ D +F VP
Sbjct: 1245 ALVQAIPAIFNVLLVCLIFWLIFSIMGVQLFAGKFRYCADKDGNRFNSSTVP 1296
>gi|301783109|ref|XP_002926970.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
6 [Ailuropoda melanoleuca]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|380690198|gb|AEX08661.1| voltage-gated sodium channel [Bactrocera dorsalis]
Length = 2134
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 868 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 927
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+ +IFAV+GMQLF K+YT +
Sbjct: 928 ISIMGRTVGALGNLTFVLCIITFIFAVMGMQLFGKNYTDNQ 968
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1695 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1754
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1755 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1793
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + L LR LR M+V+++
Sbjct: 1385 YFTNAWCWLDFVIVMVSLINFVASLAGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1444
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1445 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGRY 1479
>gi|343098400|tpg|DAA34931.1| TPA_inf: voltage-dependent sodium channel SCN2A [Anolis
carolinensis]
Length = 1990
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 803 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 862
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 863 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 894
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1574 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1633
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1634 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1668
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1254 YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1313
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ D V
Sbjct: 1314 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFSIDEV 1365
>gi|342837675|tpg|DAA34927.1| TPA_inf: voltage-dependent sodium channel SCN3A [Gallus gallus]
Length = 1917
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 916
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1496 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1555
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1556 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1596
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LSDVMILTVFCLSVFALIGLQLF 272
>gi|332234073|ref|XP_003266232.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Nomascus leucogenys]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1579 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|297471672|ref|XP_002685379.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Bos taurus]
gi|296490596|tpg|DAA32709.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
2 [Bos taurus]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|84874582|gb|ABC68288.1| Nav1.4a [Chitala chitala]
Length = 692
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 43 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 102
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 103 VGALGNLTLVLAIIVFIFAVVGMQLFGKTYKD 134
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 498 YFTNAWCWLDFLIVDVSLISLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 557
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 558 ALVGAILSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELLP 605
>gi|113676138|ref|NP_001038387.1| sodium channel, voltage gated, type XII, alpha a [Danio rerio]
gi|76786321|gb|ABA54922.1| voltage-gated sodium channel type V alpha subunit Nav1.5La [Danio
rerio]
Length = 1932
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 764 YFQQGWNIFDGIIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 823
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 824 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 853
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1501 ALRCYFFTISWNIFDFVVVILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAA 1560
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1561 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1600
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ ++F + L LR LR + M+V+
Sbjct: 1187 KKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFGAIKSLRTLRALRPLRALSRFEGMRVV 1246
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1247 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1283
>gi|426337564|ref|XP_004032772.1| PREDICTED: sodium channel protein type 3 subunit alpha [Gorilla
gorilla gorilla]
Length = 1843
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1422 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1481
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1482 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1521
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1110 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1169
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1170 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1204
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|327277924|ref|XP_003223713.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Anolis carolinensis]
Length = 2009
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 822 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 881
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 882 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 913
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1593 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1652
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1687
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1273 YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1332
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ D V
Sbjct: 1333 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFSIDEV 1384
>gi|297465091|ref|XP_002703655.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2000
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|297264186|ref|XP_002798935.1| PREDICTED: sodium channel protein type 3 subunit alpha [Macaca
mulatta]
Length = 2013
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 832 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 891
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 892 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 923
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1592 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1651
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|426220993|ref|XP_004004696.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Ovis aries]
Length = 1951
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|426220991|ref|XP_004004695.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Ovis aries]
Length = 1951
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|327277922|ref|XP_003223712.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Anolis carolinensis]
Length = 2009
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 822 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 881
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 882 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 913
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1593 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1652
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1653 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1273 YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1332
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ D V
Sbjct: 1333 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFSIDEV 1384
>gi|426220987|ref|XP_004004693.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Ovis aries]
Length = 1999
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|363736033|ref|XP_003641651.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Gallus gallus]
Length = 2011
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 823 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 882
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 883 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 914
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1590 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1649
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1690
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1276 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1335
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1336 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
>gi|363736031|ref|XP_003641650.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Gallus gallus]
Length = 2011
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 823 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 882
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 883 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 914
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1590 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1649
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1690
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1276 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1335
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1336 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|326922830|ref|XP_003207647.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Meleagris gallopavo]
Length = 2002
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 822 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 881
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 882 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 913
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1569 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1628
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1629 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1669
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1255 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1314
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1315 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1349
>gi|301783101|ref|XP_002926966.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 2001
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|114581475|ref|XP_001152817.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 10
[Pan troglodytes]
gi|397500552|ref|XP_003820974.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Pan paniscus]
Length = 1951
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|109099890|ref|XP_001099196.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Macaca mulatta]
Length = 1951
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|109099888|ref|XP_001098987.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Macaca mulatta]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|426220989|ref|XP_004004694.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Ovis aries]
Length = 1999
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|301783099|ref|XP_002926965.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|402888521|ref|XP_003907607.1| PREDICTED: sodium channel protein type 3 subunit alpha [Papio
anubis]
Length = 1988
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 807 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 866
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 867 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 898
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1567 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1626
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1627 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1666
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1255 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1314
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1315 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1349
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 178 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 234
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 235 LSDVMILTVFCLSVFALIGLQLF 257
>gi|359063058|ref|XP_003585791.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 832 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 891
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 892 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 923
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1597 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1656
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1657 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|327277928|ref|XP_003223715.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Anolis carolinensis]
Length = 1963
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 776 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 867
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1547 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1606
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1607 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1227 YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ D V
Sbjct: 1287 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFSIDEV 1338
>gi|12642272|gb|AAK00218.1|AF225986_1 voltage-gated sodium channel alpha subunit splice variant SCN3A-s
[Homo sapiens]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGLSV----LRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V + + E ++ SV R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYSVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|345797037|ref|XP_849168.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha isoform 3 [Canis lupus familiaris]
Length = 1999
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
>gi|327277926|ref|XP_003223714.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Anolis carolinensis]
Length = 1963
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 776 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 867
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1547 YFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1606
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1607 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 192 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LSDVMILTVFCLSVFALIGLQLF 271
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 1227 YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ + T E F+ D V
Sbjct: 1287 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFSIDEV 1338
>gi|363736041|ref|XP_003641655.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Gallus gallus]
Length = 1968
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 780 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 839
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 840 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 871
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1547 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1606
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1607 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1647
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1233 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1292
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1293 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1327
>gi|363736037|ref|XP_003641653.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Gallus gallus]
Length = 2022
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 834 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 893
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 894 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 925
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1601 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1660
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1661 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1701
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1287 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1346
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1347 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1381
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|327277930|ref|XP_003223716.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Anolis
carolinensis]
Length = 2002
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 815 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 875 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 906
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1582 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1641
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1642 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1681
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|363736039|ref|XP_003641654.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Gallus gallus]
Length = 1968
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 780 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 839
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 840 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 871
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1547 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1606
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1607 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1647
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1233 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1292
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1293 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1327
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|363736035|ref|XP_003641652.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Gallus gallus]
Length = 1994
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 806 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 865
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 866 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 897
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1573 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1632
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1633 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1673
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1353
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|359063040|ref|XP_003585787.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 832 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 891
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 892 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 923
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1597 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1656
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1657 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
>gi|343098402|tpg|DAA34932.1| TPA_inf: voltage-dependent sodium channel SCN3A [Anolis
carolinensis]
Length = 2007
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1587 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1646
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1647 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1686
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1272 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1331
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1332 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1366
>gi|119631736|gb|EAX11331.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_a [Homo
sapiens]
Length = 1521
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|119631740|gb|EAX11335.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_e [Homo
sapiens]
Length = 1868
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 688 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 747
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 748 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 779
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1447 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1506
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1507 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1546
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1136 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1195
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1196 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1230
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
>gi|363736043|ref|XP_003641656.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
7 [Gallus gallus]
Length = 1970
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 823 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 882
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 883 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 914
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1549 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1608
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1609 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1649
>gi|358410902|ref|XP_003581868.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 832 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 891
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 892 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 923
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1597 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1656
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1657 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|358410900|ref|XP_003581867.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1985
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 804 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 863
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 895
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1569 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1628
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1629 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1663
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|358410896|ref|XP_003581865.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2022
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 841 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 900
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 901 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 932
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1606 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1665
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1666 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1700
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1289 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1348
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1349 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1383
>gi|358410894|ref|XP_003581864.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 832 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 891
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 892 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 923
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1597 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1656
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1657 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1691
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
>gi|126362947|ref|NP_001075145.1| sodium channel protein type 3 subunit alpha isoform 2 [Homo
sapiens]
gi|12382858|gb|AAG53415.1| voltage-gated sodium channel type III alpha subunit [Homo sapiens]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|2665784|gb|AAC29515.1| voltage-gated sodium channel, subtype III [Homo sapiens]
Length = 1366
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCRLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|358410898|ref|XP_003581866.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|260528198|gb|ACX44801.1| voltage-gated sodium channel Nav1 alpha subunit [Periplaneta
americana]
Length = 2050
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 849 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 908
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y E+F P
Sbjct: 909 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYFDNVERFPDGDTP 951
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1661 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1720
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1721 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1759
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1351 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1410
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1411 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1445
>gi|194222269|ref|XP_001493754.2| PREDICTED: sodium channel protein type 3 subunit alpha [Equus
caballus]
Length = 1969
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 788 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 847
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 848 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 879
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1553 YFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1612
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1613 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1647
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1236 YFTNAWCWLDFLIVDVSLVSLAANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1295
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1296 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1330
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|119631738|gb|EAX11333.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_c [Homo
sapiens]
Length = 1494
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 802 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 861
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1300 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1334
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|2665782|gb|AAC29514.1| voltage-gated sodium channel, subtype III [Homo sapiens]
Length = 1366
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCRLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|359063054|ref|XP_003585790.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1985
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 804 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 863
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 895
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1569 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1628
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1629 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1663
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1252 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1311
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1312 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1346
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|359063050|ref|XP_003585789.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|301783103|ref|XP_002926967.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1952
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 771 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 830
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 831 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 862
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1536 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1595
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1596 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1630
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|297471670|ref|XP_002685378.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Bos taurus]
gi|296490595|tpg|DAA32708.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
1 [Bos taurus]
Length = 1999
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|119887606|ref|XP_613914.3| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Bos taurus]
Length = 1999
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|30142161|gb|AAP13992.1| sodium channel protein [Varroa destructor]
Length = 2215
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 74/110 (67%), Gaps = 11/110 (10%)
Query: 1 MALS-NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA S +YF+ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 932 MAKSPKNYFKEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 991
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDPVP 99
+SI+ TIGALGNLTFVL I+I+IFAV+GMQLF K+Y K F VP
Sbjct: 992 ISIMGKTIGALGNLTFVLGIIIFIFAVMGMQLFGKNYLDNKCLFPEQQVP 1041
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V S+++L+ ++ L LR LR + M+V+++
Sbjct: 1524 YFTNAWCWLDFVIVLVSVINLVATWLGAGKIQAFKTMRTLRALRPLRALSRFQGMRVVVN 1583
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ I A+ N+ V ++ IF+++G+Q+F+
Sbjct: 1584 ALVQAIPAIFNVLLVCLVFWLIFSIMGVQMFA 1615
>gi|47218637|emb|CAG04966.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1960
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 725 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 784
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 785 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 816
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWN+FD +VV S L +++ ++ ++LR +RL+
Sbjct: 1539 ISLRHYYFTIGWNVFDFVVVILSIMGMFLSEVIEKYFVSPTLLRVIRLARIGRILRLIKG 1598
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1599 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1639
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1213 YFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVN 1272
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1273 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1307
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 62 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 118
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 119 LSDVMILTVFCLSVFALIGLQLF 141
>gi|359063044|ref|XP_003585788.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2022
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 841 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 900
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 901 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 932
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1606 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1665
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1666 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1700
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1289 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1348
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1349 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1383
>gi|301783105|ref|XP_002926968.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Ailuropoda melanoleuca]
Length = 1952
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 771 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 830
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 831 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 862
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1536 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1595
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1596 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1630
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
>gi|113676373|ref|NP_001038360.1| sodium channel protein type 2 subunit alpha [Danio rerio]
gi|76786315|gb|ABA54919.1| voltage-gated sodium channel type I alpha subunit Nav1.1Lb [Danio
rerio]
Length = 1996
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 801 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 860
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 861 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYRE 892
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 16/97 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + +F GWN+FD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1574 ISLRHYFFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1633
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGM 81
++ LL ++ ++ AL N+ +L +V++I+A+ GM
Sbjct: 1634 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM 1670
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1260 YFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVN 1319
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1320 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1354
>gi|126362955|ref|NP_001075146.1| sodium channel protein type 3 subunit alpha isoform 3 [Homo
sapiens]
gi|7414320|emb|CAB85895.1| type III sodium channel protein [Homo sapiens]
gi|12382857|gb|AAG53414.1| voltage-gated sodium channel type III alpha subunit [Homo sapiens]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|348585917|ref|XP_003478717.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Cavia porcellus]
Length = 2000
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|395843492|ref|XP_003794515.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Otolemur garnettii]
Length = 1986
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 8/95 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L ++ LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMNNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQRH 870
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1265 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1324
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1325 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRF 1361
>gi|334330175|ref|XP_003341310.1| PREDICTED: sodium channel protein type 3 subunit alpha [Monodelphis
domestica]
Length = 1952
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 769 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 828
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 829 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 860
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1589
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1590 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1639
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|114581473|ref|XP_001152557.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 7
[Pan troglodytes]
gi|397500554|ref|XP_003820975.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Pan paniscus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|410906153|ref|XP_003966556.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Takifugu rubripes]
Length = 2026
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 821 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 880
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 881 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 912
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWN+FD +VV S L ++ ++ ++LR +RL+
Sbjct: 1605 ISLRHYYFTIGWNVFDFVVVILSIMGMFLSKVIEKYFVSPTLLRVIRLARIGRILRLIKG 1664
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1665 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1705
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTE--------FVDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1293 YFTNAWCWLDFLIVDVSLVSLVANTLGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVN 1352
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1353 ALXGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1387
>gi|344242916|gb|EGV99019.1| Sodium channel protein type 3 subunit alpha [Cricetulus griseus]
Length = 1801
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 620 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 679
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 680 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 711
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1385 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1444
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1445 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1479
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1068 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1127
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1128 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1162
>gi|334330177|ref|XP_003341311.1| PREDICTED: sodium channel protein type 3 subunit alpha [Monodelphis
domestica]
Length = 1952
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 769 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 828
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 829 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 860
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1530 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1589
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1590 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1639
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
>gi|126326257|ref|XP_001367056.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Monodelphis domestica]
Length = 2003
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1581 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1640
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1641 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1690
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|126326259|ref|XP_001367104.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2003
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1581 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1640
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1641 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1690
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|126326261|ref|XP_001367154.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Monodelphis domestica]
Length = 2002
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1580 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1639
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1640 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1689
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ L+ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVI---LMAYVTEFVDLGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|395733990|ref|XP_002813974.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5 subunit
alpha [Pongo abelii]
Length = 2173
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 933 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 992
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 993 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYS 1023
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLS-----------W 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1737 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1796
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1797 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1836
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR LS + M+V+++
Sbjct: 1422 YFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 1481
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1482 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1516
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRL--------SWTTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 350 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 406
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 407 LADVMVLTVFCLSVFALIGLQLF 429
>gi|322795001|gb|EFZ17857.1| hypothetical protein SINV_07049 [Solenopsis invicta]
Length = 1892
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 73/106 (68%), Gaps = 10/106 (9%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE-KFAPD 96
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y + PD
Sbjct: 930 ISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDHVDYFPD 975
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1506 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1565
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1566 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1604
>gi|348585911|ref|XP_003478714.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Cavia porcellus]
Length = 1999
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1583 YFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1642
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1677
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1266 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1325
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
>gi|348585913|ref|XP_003478715.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Cavia porcellus]
Length = 1950
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 769 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 828
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 829 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 860
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1534 YFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1593
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1594 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1628
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1217 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1276
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1277 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1311
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 189 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 245
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 246 LSDVMILTVFCLSVFALIGLQLF 268
>gi|119631739|gb|EAX11334.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_d [Homo
sapiens]
Length = 1472
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|410968777|ref|XP_003990876.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha [Felis catus]
Length = 1991
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1575 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1634
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1635 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1669
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|348585915|ref|XP_003478716.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Cavia porcellus]
Length = 1950
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 769 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 828
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 829 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 860
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1534 YFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1593
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1594 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1628
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1217 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1276
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1277 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1311
>gi|291391643|ref|XP_002712282.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 1
[Oryctolagus cuniculus]
Length = 2000
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|395843490|ref|XP_003794514.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Otolemur garnettii]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L ++ LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMNNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 869
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1565 ALRHYYFTNSWNIFDFVVVILSIMGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1624
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1625 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1664
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRF 1362
>gi|291391645|ref|XP_002712283.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 2
[Oryctolagus cuniculus]
Length = 2000
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|395843484|ref|XP_003794511.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Otolemur garnettii]
Length = 2018
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L ++ LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMNNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 869
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1582 ALRHYYFTNSWNIFDFVVVILSIMGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1641
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1642 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1681
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1265 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1324
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1325 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRF 1361
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|354478619|ref|XP_003501512.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|354478609|ref|XP_003501507.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2000
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|395843486|ref|XP_003794512.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Otolemur garnettii]
Length = 2019
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L ++ LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMNNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 869
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIMGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRF 1362
>gi|354478615|ref|XP_003501510.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 2001
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1585 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1644
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1679
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|354478611|ref|XP_003501508.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2000
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1584 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1643
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1678
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|119631737|gb|EAX11332.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_b [Homo
sapiens]
Length = 1307
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 127 YFQEGWNIFDGIIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 186
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 187 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 218
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
+L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 886 SLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGA 945
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 946 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 985
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 575 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 634
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 635 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 669
>gi|1110477|gb|AAA98545.1| sodium channel protein, partial [Drosophila melanogaster]
Length = 335
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 107 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 166
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 167 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 207
>gi|6981510|ref|NP_037251.1| sodium channel protein type 3 subunit alpha [Rattus norvegicus]
gi|116449|sp|P08104.1|SCN3A_RAT RecName: Full=Sodium channel protein type 3 subunit alpha; AltName:
Full=Sodium channel protein brain III subunit alpha;
AltName: Full=Sodium channel protein type III subunit
alpha; AltName: Full=Voltage-gated sodium channel
subtype III; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.3
gi|57211|emb|CAA68735.1| unnamed protein product [Rattus norvegicus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|149022130|gb|EDL79024.1| rCG26412 [Rattus norvegicus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|363744970|ref|XP_003643162.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Gallus gallus]
Length = 1963
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 795 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 854
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 855 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 886
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1558 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1617
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1618 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1657
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1302 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1336
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|297465095|ref|XP_002703657.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|297471676|ref|XP_002685381.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Bos taurus]
gi|296490598|tpg|DAA32711.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
4 [Bos taurus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|297471674|ref|XP_002685380.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Bos taurus]
gi|296490597|tpg|DAA32710.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
3 [Bos taurus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|160707887|ref|NP_061202.3| sodium channel, voltage-gated, type III, alpha [Mus musculus]
Length = 1947
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1536 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1595
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1596 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1630
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1219 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1278
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1279 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1313
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|1110476|gb|AAA98544.1| sodium channel protein, partial [Drosophila melanogaster]
gi|1110478|gb|AAA98547.1| sodium channel protein, partial [Drosophila melanogaster]
Length = 348
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 107 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 166
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 167 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 207
>gi|297465093|ref|XP_002703656.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|291391649|ref|XP_002712285.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 4
[Oryctolagus cuniculus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|395843488|ref|XP_003794513.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Otolemur garnettii]
Length = 1965
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L ++ LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMNNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 869
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1529 ALRHYYFTNSWNIFDFVVVILSIMGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1588
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1589 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1628
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1212 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1271
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1272 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRF 1308
>gi|291391647|ref|XP_002712284.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 3
[Oryctolagus cuniculus]
Length = 1951
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|118129624|ref|XP_424477.2| PREDICTED: sodium channel protein type 8 subunit alpha isoform 5
[Gallus gallus]
Length = 1978
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 901
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
>gi|363744972|ref|XP_003643163.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Gallus gallus]
Length = 1937
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 901
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1532 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1591
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1592 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1631
>gi|363744968|ref|XP_003643161.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Gallus gallus]
Length = 1989
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 821 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 880
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 881 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 912
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1683
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1268 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1327
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1328 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1362
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|1110480|gb|AAA98548.1| sodium channel protein, partial [Drosophila melanogaster]
Length = 340
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 99 MAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 158
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 159 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 199
>gi|281353936|gb|EFB29520.1| hypothetical protein PANDA_002584 [Ailuropoda melanoleuca]
Length = 2030
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 8/95 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 796 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 855
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+GALGNLT VL I+++IFAV+GMQLF K+Y+ +++
Sbjct: 856 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQRY 890
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1594 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1653
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1654 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1693
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1277 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1336
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1337 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1373
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 213 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 269
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 270 LADVMVLTVFCLSVFALIGLQLF 292
>gi|363744966|ref|XP_003643160.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Gallus gallus]
Length = 1978
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 901
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|354478613|ref|XP_003501509.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1951
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|354478617|ref|XP_003501511.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 1951
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1535 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1594
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1595 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1629
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1218 YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1277
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1278 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1312
>gi|301757655|ref|XP_002914677.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 2010
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 8/95 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+GALGNLT VL I+++IFAV+GMQLF K+Y+ +++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQRY 870
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1673
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1257 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1316
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1317 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1353
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|348540042|ref|XP_003457497.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Oreochromis niloticus]
Length = 1933
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 780 YFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 839
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 840 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 869
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F WNIFD +V+ S+V D++ ++ ++ R +RL+
Sbjct: 1501 ALRCYFFTVAWNIFDFVVIILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAA 1560
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1561 KGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFA 1600
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFTVI---MMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LADVMILTVFCLSVFALIGLQLF 267
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ ++F + L LR LR + M+V+
Sbjct: 1205 KKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFTAIKSLRTLRALRPLRALSRFEGMRVV 1264
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1265 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1301
>gi|194768088|ref|XP_001966146.1| GF19518 [Drosophila ananassae]
gi|190623031|gb|EDV38555.1| GF19518 [Drosophila ananassae]
Length = 2136
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 9/101 (8%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y FQ GWNIFD +V SL++L E V GLSVLR RL SW T+ +L
Sbjct: 870 MAMSPKYYFQEGWNIFDFFIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 929
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+SI+ T+GALGNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 930 ISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHK 970
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D ++V SL++ + V L LR LR M+V+++
Sbjct: 1362 YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1421
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1422 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1456
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD++VV S L D++ ++ ++LR +R++
Sbjct: 1672 ALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1731
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1732 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1770
>gi|296201811|ref|XP_002748166.1| PREDICTED: sodium channel protein type 4 subunit alpha [Callithrix
jacchus]
Length = 1774
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ GWNIFD I+VT SLV+L V GLSVLR L SW T+ +L+ II +
Sbjct: 636 EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFPLLRVFKLAKSWPTLNMLIKIIGN 695
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 696 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 728
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + + L LR LR + M+V+++
Sbjct: 1091 YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 1150
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + TSE+F
Sbjct: 1151 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERF 1197
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ ++ +TEFVD +S LR R+ +K ++ +I ++
Sbjct: 193 WNWLDFSVI---MMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 250 LSDVMILTVFCLSVFALVGLQLF 272
>gi|47228044|emb|CAF97673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1860
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 865
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F WNIFD +V+ S+V D++ ++ ++ R +RL+
Sbjct: 1489 ALRCYFFTIAWNIFDFVVIILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAA 1548
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1549 KGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFA 1588
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVRK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LADVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ ++F + L LR LR + M+V+
Sbjct: 1165 KKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFTAIKSLRTLRALRPLRALSRFEGMRVV 1224
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1225 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1261
>gi|311698095|gb|ADQ00342.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Eigenmannia virescens]
Length = 938
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNVFDSIIVLFSLVELGLANVQGLSVLRSFRLMRIFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL IVI+IFAV+G+QLF K Y
Sbjct: 97 MGALGNLTFVLTIVIFIFAVVGLQLFGKSYKEN 129
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL + +F GWN+FD +V+ S L D++ ++ ++ R +RL+
Sbjct: 772 IALRHYFFTVGWNVFDFVVLFCSIGGLLLTDVIEKYFVSPTLFRVIRLARIGRVLRLVRG 831
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPV 98
++ LL ++ ++ AL N+ +L +++++F++ GM F+ Y ++ D +
Sbjct: 832 ARGIRTLLFALMMSLPALFNIGLLLFLIMFMFSICGMSNFA--YVKKQAGVDEI 883
>gi|432914838|ref|XP_004079146.1| PREDICTED: sodium channel protein type 4 subunit alpha-like
[Oryzias latipes]
Length = 1956
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 790 YFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 849
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 850 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 879
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL +F WNIFD +V+ S+V D++ ++ ++ R +RL+
Sbjct: 1525 ALRCYFFTVAWNIFDFVVIILSIVGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAA 1584
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1585 KGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFA 1624
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D IV+ + V TEF+D +S LR R+ +K ++ +I ++
Sbjct: 188 WNWLDFIVIVMAYV---TEFIDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 244
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 245 LADVMILTVFCLSVFALIGLQLF 267
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ ++F + L LR LR + M+V+
Sbjct: 1211 KKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFAAIKSLRTLRALRPLRALSRFEGMRVV 1270
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1271 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1307
>gi|348507645|ref|XP_003441366.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oreochromis niloticus]
Length = 1970
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 797 YFQEGWNCFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 856
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 857 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 887
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1559 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1618
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1619 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1657
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1243 YFTNAWCWLDFFIVDVSIVTLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1302
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ Y TSE++
Sbjct: 1303 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEEY 1348
>gi|431894863|gb|ELK04656.1| Sodium channel protein type 2 subunit alpha [Pteropus alecto]
Length = 1961
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 775 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 834
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 835 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 866
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1545 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1604
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1605 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1639
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1226 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1285
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1286 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1320
>gi|342837659|tpg|DAA34919.1| TPA_inf: voltage-dependent sodium channel SCN8A-like protein
[Xenopus (Silurana) tropicalis]
Length = 1961
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L + V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 792 YFQEGWNIFDGFIVSLSLMELGLQDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 851
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 852 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 882
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+T++ ++ R +RL+
Sbjct: 1556 ALRHYYFTIGWNIFDFVVVILSIVGMFLADLITKYFVSPTLFRVIRLARIGRILRLIKGA 1615
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1616 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1655
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1240 FFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1299
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1300 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1334
>gi|410968763|ref|XP_003990869.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Felis catus]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|410968761|ref|XP_003990868.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Felis catus]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|311272550|ref|XP_003133493.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Sus scrofa]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|301783113|ref|XP_002926972.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|301783111|ref|XP_002926971.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|74004462|ref|XP_858637.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 17
[Canis lupus familiaris]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|410968765|ref|XP_003990870.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Felis catus]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|311272552|ref|XP_003133492.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Sus scrofa]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|426220985|ref|XP_004004692.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Ovis aries]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|74004464|ref|XP_535939.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Canis lupus familiaris]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|311698071|gb|ADQ00330.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Paramormyrops gabonensis]
Length = 967
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V S+++++ V+GLSVLR RL SW T+ +LL II ++
Sbjct: 37 YFQVGWNVFDSIIVVMSMLEMLLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLLRIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IF V+GMQLFSK+Y
Sbjct: 97 VGALGNLTVVLAIIVFIFTVVGMQLFSKNYKD 128
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD IVV S + D++ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTNGWNVFDFIVVIFSVASMLVADIIEKYFVSPTLFRVIRLARIGRILRLVRG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNAWCWLDFLIVDVSLVSLAANIMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|307168143|gb|EFN61422.1| Sodium channel protein para [Camponotus floridanus]
Length = 2088
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 856 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 915
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 916 VGALGNLTFVLCIIIFIFAVMGMQLFGKNY 945
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1702 ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1761
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1762 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1800
>gi|14165228|gb|AAK55439.1| Nav1.1Lb [Sternopygus macrurus]
Length = 751
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 38 YFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 97
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 98 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYRE 129
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D + V SLV L+ + L LR LR + M+V+++
Sbjct: 497 YFTNAWCWLDFLTVDVSLVSLVATALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVN 556
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 557 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 591
>gi|281344475|gb|EFB20059.1| hypothetical protein PANDA_016674 [Ailuropoda melanoleuca]
Length = 2020
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 916
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1604 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1663
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1664 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1698
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 197 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 253
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 254 LSDVMILTVFCLSVFALIGLQLF 276
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1276 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1335
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1336 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
>gi|221136923|ref|NP_001137581.1| sodium channel protein type 2 subunit alpha [Bos taurus]
gi|296490579|tpg|DAA32692.1| TPA: sodium channel, voltage-gated, type II, alpha subunit [Bos
taurus]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|301783117|ref|XP_002926974.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Ailuropoda melanoleuca]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|345797049|ref|XP_858448.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 13
[Canis lupus familiaris]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|335302920|ref|XP_003359593.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Sus
scrofa]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|301783115|ref|XP_002926973.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|23630517|gb|AAN37408.1| sodium channel [Varroa destructor]
Length = 1089
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 1 YFKEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 60
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK--FAPDPVP 99
IGALGNLTFVL I+I+IFAV+GMQLF K+Y K F VP
Sbjct: 61 IGALGNLTFVLGIIIFIFAVMGMQLFGKNYLDNKCLFPEQQVP 103
>gi|426220983|ref|XP_004004691.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Ovis aries]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|426220979|ref|XP_004004689.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Ovis aries]
gi|426220981|ref|XP_004004690.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Ovis aries]
Length = 2006
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|345797047|ref|XP_858480.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 14
[Canis lupus familiaris]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|335302918|ref|XP_003359592.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Sus
scrofa]
Length = 1957
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|224038900|gb|ACN38332.1| sodium channel protein [Anopheles minimus]
Length = 391
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 94 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 153
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 154 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHDLP 196
>gi|344267966|ref|XP_003405835.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Loxodonta africana]
Length = 1980
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 903
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|326936479|ref|XP_003214281.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Meleagris gallopavo]
Length = 1299
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 807 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 866
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 867 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 906
>gi|326936475|ref|XP_003214279.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Meleagris gallopavo]
Length = 1290
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 807 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 866
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 867 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 906
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|344267968|ref|XP_003405836.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Loxodonta africana]
Length = 1939
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKE 903
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ + ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|311698141|gb|ADQ00365.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Apteronotus albifrons]
Length = 930
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SL++L V+GLSVLR RL SW T +L+ II ++
Sbjct: 37 YFQVGWNIFDSIIVTMSLMELGLANVEGLSVLRFFRLMRVFKLAKSWPTFNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 127
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 459 YFTNAWCWLDFLIVDVSLISLTANILGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 518
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 519 ALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKF 553
>gi|27819103|gb|AAO23570.1| Nav1.5Lb [Sternopygus macrurus]
Length = 1136
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 422 YFQQGWNIFDSFIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 481
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 482 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 511
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTE--------FVDGLSVLRGLR-----LSWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 863 KKYFTNYWCWLDFLIVDVSLVSLVANTLGYSDLAAIKSLRTLRALRPLRALSRFEGMRVV 922
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 923 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 959
>gi|148291097|emb|CAM12801.1| voltage-gated sodium channel alpha subunit [Anopheles gambiae]
Length = 2139
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 867 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 926
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 927 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHDLP 969
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1676 ALRYHYFIEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1735
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1736 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1774
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1366 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1425
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1426 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1460
>gi|395519659|ref|XP_003763960.1| PREDICTED: sodium channel protein type 2 subunit alpha [Sarcophilus
harrisii]
Length = 2007
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1591 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1650
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1651 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA--YVKKEYGID 1694
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1271 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1330
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1331 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1365
>gi|410046722|ref|XP_001141985.3| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Pan troglodytes]
Length = 1914
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|444705719|gb|ELW47111.1| Sodium channel protein type 2 subunit alpha [Tupaia chinensis]
Length = 1626
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 633 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 692
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 693 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 724
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1211 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1270
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1271 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1305
>gi|326936477|ref|XP_003214280.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Meleagris gallopavo]
Length = 1274
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 791 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 850
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPD 96
+GALGNLT VL I+++IFAV+GMQLF K Y K PD
Sbjct: 851 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPD 890
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|229442477|gb|AAI72765.1| sodium channel, voltage-gated, type II, alpha isoform 1 [synthetic
construct]
Length = 1154
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|440905747|gb|ELR56090.1| Sodium channel protein type 2 subunit alpha, partial [Bos grunniens
mutus]
Length = 1623
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGLIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 916
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 197 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 253
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 254 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 290
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1276 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1335
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1336 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
>gi|158298036|ref|XP_001689103.1| AGAP004707-PB [Anopheles gambiae str. PEST]
gi|157014615|gb|EDO63520.1| AGAP004707-PB [Anopheles gambiae str. PEST]
Length = 2092
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 843 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 902
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 903 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDHDLP 945
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1629 ALRYHYFIEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1688
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1689 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1727
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1316 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1375
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1376 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1410
>gi|401728825|gb|AFQ00696.1| sodium channel [Culex quinquefasciatus]
Length = 2082
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 830 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 889
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 890 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 919
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1639 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1698
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1699 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1737
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1329 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1388
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1389 ALVQAIPSIFNVLLVCLIFWLIFAMMGVQLFAGKY 1423
>gi|290349618|dbj|BAI77917.1| para-sodium channel [Culex quinquefasciatus]
Length = 2149
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 883 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 942
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 943 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 972
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1705 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1764
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1765 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1803
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1395 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1454
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1455 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1489
>gi|113675683|ref|NP_001038648.1| sodium channel, voltage-gated, type VIII, alpha b [Danio rerio]
gi|76786325|gb|ABA54924.1| voltage-gated sodium channel type VIII alpha subunit Nav1.6b [Danio
rerio]
Length = 1958
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 785 YFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 875
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWN+FD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1550 ALRHYYFTNGWNVFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1609
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1610 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1649
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPRLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1234 YFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1293
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1294 ALVGAIPSIMNVPLVCLIFWLIFSIMGVNLFAGKY 1328
>gi|401728829|gb|AFQ00698.1| sodium channel [Culex quinquefasciatus]
Length = 2089
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 863 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 922
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 923 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 952
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1646 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1705
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1706 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1744
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1336 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1395
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1396 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1430
>gi|290349620|dbj|BAI77918.1| para-sodium channel [Culex pipiens pallens]
Length = 2147
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 883 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 942
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 943 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 972
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1705 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1764
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1765 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1803
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1395 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1454
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1455 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1489
>gi|214011860|gb|ACB37023.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2140
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 862 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 921
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 922 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 951
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1684 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1743
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1744 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1782
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1374 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1433
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1434 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1468
>gi|214011858|gb|ACB37022.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2140
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 862 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 921
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 922 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 951
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1684 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1743
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1744 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1782
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1374 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1433
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1434 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1468
>gi|432959050|ref|XP_004086163.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Oryzias latipes]
Length = 1971
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 797 YFQEGWNCFDGFIVTLSLVELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 856
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 857 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 887
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1560 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1619
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1620 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1658
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1244 YFTNAWCWLDFFIVDVSIVTLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ Y E F P+ V
Sbjct: 1304 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETAEELFQPEVV 1355
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
>gi|432959046|ref|XP_004086161.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Oryzias latipes]
Length = 1971
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 797 YFQEGWNCFDGFIVTLSLVELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 856
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 857 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 887
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1560 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1619
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1620 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1658
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1244 YFTNAWCWLDFFIVDVSIVTLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ Y E F P+ V
Sbjct: 1304 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETAEELFQPEVV 1355
>gi|148277530|tpe|CAM31894.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 864 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 923
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 924 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 953
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1686 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1745
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1746 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1784
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1376 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1435
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1436 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1470
>gi|432098369|gb|ELK28169.1| Sodium channel protein type 2 subunit alpha [Myotis davidii]
Length = 1816
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 726 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 785
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 786 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 817
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1398 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1457
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1458 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1492
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1177 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1236
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1237 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1271
>gi|7021531|gb|AAF35390.1|AF225988_1 voltage-gated sodium channel alpha subunit [Homo sapiens]
Length = 1980
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|358418691|ref|XP_003584021.1| PREDICTED: sodium channel protein type 5 subunit alpha-like [Bos
taurus]
Length = 222
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 65 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 124
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 125 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 158
>gi|338726087|ref|XP_001916036.2| PREDICTED: sodium channel protein type 8 subunit alpha [Equus
caballus]
Length = 1916
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1511 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1570
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1571 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1610
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|192337580|gb|ACF04199.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 875 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 934
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 935 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 964
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1658 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1717
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1718 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1756
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1348 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1407
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1408 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1442
>gi|148277526|tpe|CAM31892.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 864 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 923
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 924 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 953
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++L +V L LR LR W M+V+++
Sbjct: 1376 YFTNAWCWLDFIIVMLSLINLFAIWVGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVN 1435
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1436 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1470
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1686 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1745
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1746 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1784
>gi|157111984|ref|XP_001657359.1| voltage-gated sodium channel [Aedes aegypti]
gi|108878190|gb|EAT42415.1| AAEL006019-PA [Aedes aegypti]
Length = 1851
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 622 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 681
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 682 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 724
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1395 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1454
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1455 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1493
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1085 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1144
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1145 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1179
>gi|157118431|ref|XP_001653186.1| sodium channel protein para [Aedes aegypti]
gi|108875709|gb|EAT39934.1| AAEL008297-PA, partial [Aedes aegypti]
Length = 915
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 819 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 879 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 908
>gi|300797151|ref|NP_001180031.1| sodium channel protein type 8 subunit alpha [Bos taurus]
gi|296487893|tpg|DAA30006.1| TPA: sodium channel, voltage gated, type VIII, alpha subunit [Bos
taurus]
Length = 1980
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|214011862|gb|ACB37024.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2147
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 869 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 928
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 929 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 958
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1691 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1750
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1751 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1789
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1381 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1440
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1441 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1475
>gi|441620268|ref|XP_004088656.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1981
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 813 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 872
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 873 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 904
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1576 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1635
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1636 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1675
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1260 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1319
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1320 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1354
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|192337582|gb|ACF04200.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 875 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 934
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 935 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 964
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1658 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1717
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1718 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1756
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1348 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1407
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1408 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1442
>gi|50950233|ref|NP_001002994.1| sodium channel protein type 5 subunit alpha [Canis lupus
familiaris]
gi|29691680|emb|CAD88248.1| voltage-gated sodium channel alpha subunit [Canis lupus familiaris]
Length = 2013
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 774 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 833
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 834 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQRH 868
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1578 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1637
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1638 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1677
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1261 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1320
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ +F+ +
Sbjct: 1321 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGKF 1357
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|441620262|ref|XP_004088655.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1980
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|350583949|ref|XP_003481629.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha-like [Sus scrofa]
Length = 1980
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S L D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFNIGWNIFDFVVVILSIEGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|192337584|gb|ACF04201.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 875 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 934
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 935 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 964
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1658 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1717
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1718 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1756
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1348 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1407
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1408 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1442
>gi|157111982|ref|XP_001657358.1| voltage-gated sodium channel [Aedes aegypti]
gi|108878189|gb|EAT42414.1| AAEL006019-PC [Aedes aegypti]
Length = 1900
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 635 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 694
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 695 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 737
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1444 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1503
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1504 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1542
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1134 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1193
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1194 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1228
>gi|829034|gb|AAC42059.1| sodium channel protein 6 [Rattus norvegicus]
gi|1582002|prf||2117364A voltage-gated Na channel NaCh6
Length = 1976
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 808 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 867
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 868 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 899
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1571 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1630
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1631 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1670
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1255 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1314
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1315 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1349
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++ + V + +FA+IG+QLF + + +
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLFHGNLSKQ 282
>gi|410215096|gb|JAA04767.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
gi|410300920|gb|JAA29060.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
Length = 1939
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|50080864|gb|AAT69680.1| voltage-dependent para-like sodium channel, partial [Aedes
albopictus]
Length = 2058
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 826 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 886 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 928
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1600 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1659
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1660 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1698
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1290 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1349
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1350 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1384
>gi|291391653|ref|XP_002712288.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 2 [Oryctolagus cuniculus]
Length = 2006
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|441620273|ref|XP_004088657.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1981
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 813 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 872
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 873 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 904
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1576 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1635
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1636 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1675
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1260 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1319
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1320 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1354
>gi|432959052|ref|XP_004086164.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
4 [Oryzias latipes]
Length = 1930
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 797 YFQEGWNCFDGFIVTLSLVELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 856
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 857 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 887
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1519 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1578
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1579 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1617
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
>gi|224960|prf||1204264B Na channel II protein
Length = 2005
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1583 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1642
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIII 56
+ + WN D V+T + V TEFV+ +S LR R+ +K ++ +I
Sbjct: 186 FLRNPWNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALI 242
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ L ++ + V + +FA+IG+QLF
Sbjct: 243 QSVKKLSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|332206182|ref|XP_003252170.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Nomascus leucogenys]
Length = 1939
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|297262393|ref|XP_002798632.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Macaca mulatta]
Length = 1939
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|296211699|ref|XP_002752529.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Callithrix jacchus]
Length = 1938
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 811 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 870
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 871 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 902
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1533 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1592
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1593 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1632
>gi|295789135|ref|NP_001171455.1| sodium channel protein type 8 subunit alpha isoform 2 [Homo
sapiens]
gi|397522123|ref|XP_003831128.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Pan paniscus]
gi|426372569|ref|XP_004053195.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Gorilla gorilla gorilla]
gi|410215094|gb|JAA04766.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
Length = 1939
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|157111988|ref|XP_001657361.1| voltage-gated sodium channel [Aedes aegypti]
gi|108878192|gb|EAT42417.1| AAEL006019-PB [Aedes aegypti]
Length = 1835
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 606 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 665
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 666 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 708
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1379 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1438
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1439 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1477
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1069 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1128
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1129 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1163
>gi|6981506|ref|NP_036779.1| sodium channel protein type 2 subunit alpha [Rattus norvegicus]
gi|116448|sp|P04775.1|SCN2A_RAT RecName: Full=Sodium channel protein type 2 subunit alpha; AltName:
Full=Sodium channel protein brain II subunit alpha;
AltName: Full=Sodium channel protein type II subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.2
gi|57215|emb|CAA27287.1| unnamed protein product [Rattus norvegicus]
Length = 2005
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1583 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1642
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|426224456|ref|XP_004006386.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Ovis aries]
Length = 1977
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1572 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1631
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1632 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1671
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1350
>gi|332206180|ref|XP_003252169.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Nomascus leucogenys]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|291391651|ref|XP_002712287.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 1 [Oryctolagus cuniculus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|149022132|gb|EDL79026.1| rCG26977, isoform CRA_a [Rattus norvegicus]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1583 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1642
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|119578602|gb|EAW58198.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_b
[Homo sapiens]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
>gi|4321647|gb|AAD15789.1| voltage-gated sodium channel alpha subunit [Homo sapiens]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|397500548|ref|XP_003820972.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Pan paniscus]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|397500544|ref|XP_003820970.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Pan paniscus]
gi|397500546|ref|XP_003820971.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Pan paniscus]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|351697574|gb|EHB00493.1| Sodium channel protein type 8 subunit alpha [Heterocephalus glaber]
Length = 1976
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1571 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1630
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1631 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1670
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1350
>gi|114581489|ref|XP_001153476.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 7
[Pan troglodytes]
gi|114581491|ref|XP_001153541.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 8
[Pan troglodytes]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|449488397|ref|XP_004175387.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Taeniopygia guttata]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 8 FQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLSI 54
F W D ++V+ SLV L+ + L LR LR + M+V+++
Sbjct: 1258 FTNAWCWLDFLIVSVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNA 1317
Query: 55 IISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1318 LVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|426372575|ref|XP_004053198.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 5
[Gorilla gorilla gorilla]
Length = 1981
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 813 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 872
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 873 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 904
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1576 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1635
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1636 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1675
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1260 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1319
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1320 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1354
>gi|93141214|ref|NP_001035233.1| sodium channel protein type 2 subunit alpha isoform 2 [Homo
sapiens]
gi|12382816|gb|AAG53412.1| voltage-gated sodium channel type II alpha subunit [Homo sapiens]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|402886023|ref|XP_003906441.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Papio anubis]
Length = 1931
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 804 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 863
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 864 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 895
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1526 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1585
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1586 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1625
>gi|355786104|gb|EHH66287.1| Sodium channel protein type VIII subunit alpha [Macaca
fascicularis]
Length = 1976
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1571 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1630
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1631 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1670
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1350
>gi|354478623|ref|XP_003501514.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|258674489|gb|ACV87001.1| paralytic [Bombyx mori]
Length = 2038
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 865 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 924
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 925 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 954
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1658 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1717
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1718 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1756
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1348 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1407
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1408 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1442
>gi|150010574|ref|NP_001092768.1| sodium channel, voltage-gated, type II, alpha 1 [Mus musculus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1584 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1643
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|114581485|ref|XP_001153227.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Pan troglodytes]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|3309115|gb|AAC26015.1| voltage-gated sodium channel variant rPN4a [Rattus norvegicus]
Length = 1988
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1682
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1361
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|403258879|ref|XP_003921969.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Saimiri boliviensis boliviensis]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|403258875|ref|XP_003921967.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403258877|ref|XP_003921968.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|354478631|ref|XP_003501518.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 1989
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 802 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 861
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1573 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1632
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1633 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1667
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1253 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1312
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1313 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1347
>gi|354478621|ref|XP_003501513.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|297691869|ref|XP_002823317.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Pongo abelii]
Length = 1934
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 817 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 876
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 877 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 908
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVD--LMTE---FVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V L+T+ + ++ R +RL+
Sbjct: 1529 ALRHYYFTIGWNIFDFVVVILSIVGDFLLTQIKKYFVSPTLFRVIRLARIGRILRLIKGA 1588
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1589 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1628
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1213 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1272
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1273 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1307
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 199 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 255
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 256 LSDVMILTVFCLSVFALIGLQLF 278
>gi|296211697|ref|XP_002752528.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Callithrix jacchus]
Length = 1979
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 811 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 870
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 871 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 902
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1673
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1258 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1317
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1318 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1352
>gi|149032006|gb|EDL86918.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_a [Rattus norvegicus]
Length = 1988
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1682
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1267 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1326
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1327 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1361
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|157111986|ref|XP_001657360.1| voltage-gated sodium channel [Aedes aegypti]
gi|108878191|gb|EAT42416.1| AAEL006019-PD [Aedes aegypti]
Length = 1827
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 598 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 657
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 658 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 700
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1371 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1430
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1431 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1469
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1061 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1120
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1121 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1155
>gi|93141210|ref|NP_066287.2| sodium channel protein type 2 subunit alpha isoform 1 [Homo
sapiens]
gi|93141212|ref|NP_001035232.1| sodium channel protein type 2 subunit alpha isoform 1 [Homo
sapiens]
gi|25014053|sp|Q99250.3|SCN2A_HUMAN RecName: Full=Sodium channel protein type 2 subunit alpha; AltName:
Full=HBSC II; AltName: Full=Sodium channel protein brain
II subunit alpha; AltName: Full=Sodium channel protein
type II subunit alpha; AltName: Full=Voltage-gated
sodium channel subunit alpha Nav1.2
gi|12382817|gb|AAG53413.1| voltage-gated sodium channel type II alpha subunit [Homo sapiens]
gi|62822423|gb|AAY14971.1| unknown [Homo sapiens]
gi|260158896|gb|ACX32328.1| sodium channel, voltage-gated, type II, alpha subunit isoform 1
[synthetic construct]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|410964457|ref|XP_003988771.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Felis catus]
Length = 1939
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|222537873|gb|ACM63162.1| monocyte-macrophage NaV1.6 splice variant [Homo sapiens]
Length = 1939
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|109099902|ref|XP_001099916.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Macaca mulatta]
Length = 2017
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 830 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 889
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 890 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 921
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1601 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1660
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1661 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1695
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1281 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1340
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1341 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1375
>gi|62087356|dbj|BAD92125.1| Sodium channel protein type II alpha subunit variant [Homo sapiens]
Length = 1315
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 825 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 884
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 885 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 916
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 198 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 254
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 255 LSDVMILTVFCLSVFALIGLQLF 277
>gi|426372573|ref|XP_004053197.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Gorilla gorilla gorilla]
Length = 1981
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 813 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 872
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 873 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 904
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1576 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1635
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1636 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1675
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1260 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1319
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1320 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1354
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|410964455|ref|XP_003988770.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Felis catus]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|354478627|ref|XP_003501516.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 2017
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 830 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 889
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 890 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 921
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1601 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1660
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1661 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1695
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1281 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1340
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1341 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1375
>gi|309753887|gb|ADO86245.1| voltage-dependent sodium channel SCN4A [Lepidosiren paradoxa]
Length = 1073
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+VT SLV+L V GLSV R RL SW T+ +L+ II ++
Sbjct: 470 YFQVGWNIFDSIIVTLSLVELGLANVQGLSVPRSFRLLRVFKLAKSWPTLNMLIKIIGNS 529
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL IV++IFAV+GMQLF K Y
Sbjct: 530 VGALGNLTLVLAIVVFIFAVVGMQLFGKMY 559
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + + L LR LR + M+V+++
Sbjct: 922 YFTNAWCWLDFLIVDVSLVSLTANWMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 981
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 982 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1016
>gi|78126165|ref|NP_062139.2| sodium channel protein type 8 subunit alpha [Rattus norvegicus]
gi|81886863|sp|O88420.1|SCN8A_RAT RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Peripheral nerve protein type 4; Short=PN4;
AltName: Full=Sodium channel 6; Short=NaCh6; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|3309113|gb|AAC26014.1| voltage-gated sodium channel rPN4 [Rattus norvegicus]
Length = 1978
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|410964453|ref|XP_003988769.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Felis catus]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|355564241|gb|EHH20741.1| Sodium channel protein type VIII subunit alpha [Macaca mulatta]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|354478633|ref|XP_003501519.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
7 [Cricetulus griseus]
Length = 1965
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1549 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1608
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1609 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1643
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|149032007|gb|EDL86919.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_b [Rattus norvegicus]
Length = 1978
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|109096715|ref|XP_001090295.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Macaca mulatta]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|50080866|gb|AAT69681.1| voltage-dependent para-like sodium channel, partial [Aedes aegypti]
Length = 2064
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 799 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 858
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 859 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 901
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1608 ALRYHYFIEPWNLFDFVVVILSILGLVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1667
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1668 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1706
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1298 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1357
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1358 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1392
>gi|7657544|ref|NP_055006.1| sodium channel protein type 8 subunit alpha isoform 1 [Homo
sapiens]
gi|397522121|ref|XP_003831127.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Pan paniscus]
gi|426372567|ref|XP_004053194.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Gorilla gorilla gorilla]
gi|34098756|sp|Q9UQD0.1|SCN8A_HUMAN RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|4958860|dbj|BAA78033.1| sodium channel [Homo sapiens]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|426372571|ref|XP_004053196.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Gorilla gorilla gorilla]
Length = 1980
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|457879|gb|AAA18895.1| voltage-gated sodium channel [Homo sapiens]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|291391657|ref|XP_002712290.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 4 [Oryctolagus cuniculus]
Length = 1957
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|224054936|ref|XP_002197631.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Taeniopygia guttata]
Length = 2007
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1585 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1644
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1645 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1685
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1271 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1330
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1331 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1377
>gi|148695059|gb|EDL27006.1| mCG129387 [Mus musculus]
Length = 1977
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1555 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1614
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1615 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1655
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
>gi|109099894|ref|XP_001100011.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Macaca mulatta]
gi|109099896|ref|XP_001100368.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
10 [Macaca mulatta]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|403296672|ref|XP_003939222.1| PREDICTED: sodium channel protein type 8 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1979
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 811 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 870
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 871 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 902
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1673
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1258 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1317
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1318 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1352
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|118093616|ref|XP_422025.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Gallus gallus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1584 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1643
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1376
>gi|22022496|gb|AAM83131.1| voltage-gated sodium channel type 1.2 [Xenopus laevis]
Length = 588
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+ + SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 172 YFQEGWNIFDGIIASLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 231
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 232 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 263
>gi|354478629|ref|XP_003501517.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 1957
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|296204670|ref|XP_002749429.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Callithrix jacchus]
gi|296204672|ref|XP_002749430.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Callithrix jacchus]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|291391655|ref|XP_002712289.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 3 [Oryctolagus cuniculus]
Length = 1957
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|217330564|ref|NP_001136084.1| voltage-gated sodium channel alpha subunit [Bombyx mori]
gi|210148108|gb|ACJ09096.1| voltage-gated sodium channel alpha subunit [Bombyx mori]
Length = 2038
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 865 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 924
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 925 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 954
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1658 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1717
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1718 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1756
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1348 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1407
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1408 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1442
>gi|390464444|ref|XP_003733222.1| PREDICTED: sodium channel protein type 2 subunit alpha [Callithrix
jacchus]
Length = 2005
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|338715732|ref|XP_003363317.1| PREDICTED: sodium channel protein type 2 subunit alpha [Equus
caballus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|118093618|ref|XP_001233892.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Gallus gallus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1584 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1643
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1644 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1376
>gi|431921672|gb|ELK19024.1| Sodium channel protein type 8 subunit alpha [Pteropus alecto]
Length = 1353
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 682 YFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 741
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 742 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 773
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1129 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1188
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1189 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1223
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 66 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 122
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 123 LSDVMILTVFCLSVFALIGLQLF 145
>gi|197927077|dbj|BAF37093.2| voltage-dependent para-like sodium channel splicing variant 1
[Plutella xylostella]
Length = 1890
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW + +++SI+ T
Sbjct: 810 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT
Sbjct: 870 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDH 902
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLV---------DLMTEF--VDGLSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SLV D + F + L LR LR W M+V+++
Sbjct: 1307 YFTNAWCWLDFIIVMLSLVNHGAVMAGADDIPAFRSMRTLRALRPLRAVSRWEGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN FD +VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|149730669|ref|XP_001495738.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 5
[Equus caballus]
Length = 1957
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|440894474|gb|ELR46917.1| Sodium channel protein type 8 subunit alpha, partial [Bos grunniens
mutus]
Length = 1977
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 830 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 889
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 890 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 921
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1592 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1651
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1652 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1691
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1277 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1336
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1337 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1371
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 201 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 257
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 258 LSDVMILTVFCLSVFALIGLQLF 280
>gi|354478625|ref|XP_003501515.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1957
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|149730665|ref|XP_001495618.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Equus caballus]
Length = 2006
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|380792815|gb|AFE68283.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 970
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
>gi|363736020|ref|XP_003641646.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1963
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 776 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 867
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1541 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1600
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1227 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1287 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1333
>gi|344268032|ref|XP_003405868.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Loxodonta africana]
Length = 2006
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|295136555|gb|ADF80418.1| voltage-gated sodium channel [Helicoverpa zea]
Length = 1830
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 839 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 898
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 899 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPDGDLP 941
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1322 YFTNAWCWLDFIIVMVSLINFVAGLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1381
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1382 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1416
>gi|197927078|dbj|BAF37094.2| voltage-dependent para-like sodium channel splicing variant 2
[Plutella xylostella]
Length = 1890
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 810 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 870 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDH 902
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1307 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN FD +VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|338715734|ref|XP_003363318.1| PREDICTED: sodium channel protein type 2 subunit alpha [Equus
caballus]
Length = 1957
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|426337560|ref|XP_004032770.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gorilla
gorilla gorilla]
Length = 2014
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 25/104 (24%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1589 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1648
Query: 51 LLSIIISTIGALGNLTFVLVI---------VIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L + V++I+A+ GM F+
Sbjct: 1649 LLFALMMSLPALFNIGLLLFLXXXXLLLFLVMFIYAIFGMSNFA 1692
>gi|363736025|ref|XP_003641648.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1963
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 776 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 867
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1541 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1600
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1641
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1227 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1286
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1287 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1333
>gi|363736022|ref|XP_003641647.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1989
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 802 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 861
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 893
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1567 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1626
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1627 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1667
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1253 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1312
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1313 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1359
>gi|348585691|ref|XP_003478604.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Cavia
porcellus]
Length = 1969
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1553 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1612
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1613 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1647
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1233 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1292
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1293 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1327
>gi|344268034|ref|XP_003405869.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Loxodonta africana]
Length = 2006
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 819 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 878
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 879 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1590 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1649
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1650 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1684
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1270 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1329
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1330 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|363736018|ref|XP_003641645.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 2017
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 830 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 889
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 890 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 921
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +++ ++ ++ R +RL+
Sbjct: 1595 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKG 1654
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1655 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1695
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1281 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1340
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 1341 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1387
>gi|119631733|gb|EAX11328.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119631734|gb|EAX11329.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_a
[Homo sapiens]
Length = 1518
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|197927080|dbj|BAF37095.2| voltage-dependent para-like sodium channel splicing variant 1
[Plutella xylostella]
Length = 1890
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW + +++SI+ T
Sbjct: 810 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLTFVL I+I+IFAV+GMQLF K+YT
Sbjct: 870 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDH 902
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLV---------DLMTEF--VDGLSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SLV D + F + L LR LR W M+V+++
Sbjct: 1307 YFTNAWCWLDFIIVMLSLVNHGAVMAGADDIPAFRSMRTLRALRPLRAVSRWEGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN FD +VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|344268036|ref|XP_003405870.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Loxodonta africana]
Length = 1957
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|189172239|gb|ACD80424.1| para sodium channel alpha subunit [Bombyx mori]
Length = 1851
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW + +++SI+ T
Sbjct: 826 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 886 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 928
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1619 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1678
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1679 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1717
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1309 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1368
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1369 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1403
>gi|344268038|ref|XP_003405871.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Loxodonta africana]
Length = 1957
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|395835397|ref|XP_003790667.1| PREDICTED: sodium channel protein type 8 subunit alpha [Otolemur
garnettii]
Length = 1922
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1517 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1576
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1577 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1616
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|402888523|ref|XP_003907608.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Papio anubis]
Length = 1925
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 745 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 804
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 805 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 836
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1509 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1568
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1569 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1603
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 119 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 175
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 176 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 212
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1196 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1255
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1256 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1290
>gi|357623276|gb|EHJ74501.1| voltage-gated sodium channel alpha subunit [Danaus plexippus]
Length = 2112
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 898 YFQEGWNVFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 957
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 958 MGALGNLTFVLCIIIFIFAVMGMQLFGKNY 987
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1687 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1746
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1747 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1785
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1377 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1436
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1437 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1471
>gi|87128434|gb|ABD22982.1| Nav1.4a [Danio rerio]
Length = 778
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNI D I+VT SLV+L V GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQVGWNILDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 97 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 127
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 454 YFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 513
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ + T+E+ P
Sbjct: 514 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTEERIP 561
>gi|119578601|gb|EAW58197.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_a
[Homo sapiens]
Length = 1844
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 677 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 736
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 737 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 768
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1439 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1498
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1499 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1538
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
>gi|145843749|gb|ABP96886.1| para sodium channel alpha subunit [Bombyx mori]
Length = 1329
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW + +++SI+ T
Sbjct: 303 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 362
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 363 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 405
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1096 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1155
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1156 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1194
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 786 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 845
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 846 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 880
>gi|290783832|gb|ADD62494.1| voltage-gated resistant sodium channel protein, partial
[Tetranychus cinnabarinus]
Length = 1749
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN+FD I+V SL+++ E V GLSVLR RL SW T+ +L++I+ T
Sbjct: 632 YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKSWPTLNLLITIMGKT 691
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+G LGNLTFVL I+++IFAV+GMQLF +Y+ +
Sbjct: 692 LGDLGNLTFVLAIIVFIFAVMGMQLFGANYSKK 724
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLR-------LSWTT-MKVLLS 53
YF W D I+V S ++L EF + +R LR +S + M+V+++
Sbjct: 1280 YFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAFKTMRTLRAFRPLRAMSRSKGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
+I I A+ N+ V +I IFA++G+QLF+ + T EK P+ +
Sbjct: 1340 ALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGKFSYCRDRNTEEKSDPNEI 1391
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVV-----TASLVDLMTEFVDGLSVLRGLRL-----------SW 45
AL YF+ WN+FD ++V +++L D + ++ ++LR +R+
Sbjct: 1593 ALRFHYFREPWNVFDFVIVILSIASSALKDFVENYLISPTLLRVVRVVKIGRVLRLVKGA 1652
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1653 RGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1691
>gi|149639500|ref|XP_001512686.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Ornithorhynchus anatinus]
Length = 2008
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 821 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 880
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 881 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 912
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1592 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1651
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1686
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1272 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1331
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1332 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1366
>gi|119578605|gb|EAW58201.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_e
[Homo sapiens]
Length = 1855
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 688 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 747
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 748 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 779
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1450 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1509
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1510 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1549
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
>gi|390351073|ref|XP_793384.3| PREDICTED: sodium channel protein para-like [Strongylocentrotus
purpuratus]
Length = 2665
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+AL +F+ WN+FDL VV SL++ V+GLSVLR RL SWTTM+ LL
Sbjct: 672 IALDKKFFKNPWNVFDLFVVCVSLLEFGLANVEGLSVLRSFRLLRVLKLAQSWTTMRTLL 731
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
SII S I A+GN+ VL+IV++IFAVIGMQ+ YT E F
Sbjct: 732 SIIASAITAIGNVMIVLLIVMFIFAVIGMQILGGSYTPENFG 773
>gi|380799019|gb|AFE71385.1| sodium channel protein type 8 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 1373
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 205 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 264
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 265 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 296
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 968 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1027
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1028 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1067
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 652 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 711
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 712 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 746
>gi|284518365|gb|ADB92494.1| voltage-gated sensitive sodium channel, partial [Tetranychus
cinnabarinus]
Length = 1749
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN+FD I+V SL+++ E V GLSVLR RL SW T+ +L++I+ T
Sbjct: 632 YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKSWPTLNLLITIMGKT 691
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+G LGNLTFVL I+++IFAV+GMQLF +Y+ +
Sbjct: 692 LGDLGNLTFVLAIIVFIFAVMGMQLFGANYSKK 724
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLRL--------SWTTMKVLLS 53
YF W D I+V S ++L EF + +R LR M+V+++
Sbjct: 1280 YFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAFKTMRTLRAFRPLRAMSRSKGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
+I I A+ N+ V +I IFA++G+QLF+ + T EK P+ +
Sbjct: 1340 ALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGKFSYCRDRNTEEKSDPNEI 1391
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVV-----TASLVDLMTEFVDGLSVLRGLRL-----------SW 45
AL YF+ WN+FD ++V +++L D + ++ ++LR +R+
Sbjct: 1593 ALRFHYFREPWNVFDFVIVILSIASSALKDFVENYLISPTLLRVVRVVKIGRVLRLVKGA 1652
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1653 RGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1691
>gi|73996384|ref|XP_850134.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Canis lupus familiaris]
Length = 1980
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|301772386|ref|XP_002921606.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1977
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1572 ALRHYYFTVGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1631
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1632 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1671
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1350
>gi|149639502|ref|XP_001512721.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Ornithorhynchus anatinus]
Length = 2008
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 821 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 880
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 881 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 912
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1592 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1651
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1652 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1686
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1272 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1331
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1332 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1366
>gi|301772388|ref|XP_002921607.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1936
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1531 ALRHYYFTVGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1590
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1591 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1630
>gi|404428523|gb|AFR68409.1| voltage-gated sensitive sodium channel [Tetranychus cinnabarinus]
Length = 2193
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN+FD I+V SL+++ E V GLSVLR RL SW T+ +L++I+ T
Sbjct: 849 YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKSWPTLNLLITIMGKT 908
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+G LGNLTFVL I+++IFAV+GMQLF +Y+ +
Sbjct: 909 LGDLGNLTFVLAIIVFIFAVMGMQLFGANYSKK 941
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLR-------LSWTT-MKVLLS 53
YF W D I+V S ++L EF + +R LR +S + M+V+++
Sbjct: 1497 YFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAFKTMRTLRAFRPLRAMSRSKGMRVVVN 1556
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
+I I A+ N+ V +I IFA++G+QLF+ + T EK P+ +
Sbjct: 1557 ALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGKFSYCRDRNTEEKSDPNEI 1608
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVV-----TASLVDLMTEFVDGLSVLRGLRL-----------SW 45
AL YF+ WN+FD ++V +++L D + ++ ++LR +R+
Sbjct: 1810 ALRFHYFREPWNVFDFVIVILSIASSALKDFVENYLISPTLLRVVRVVKIGRVLRLVKGA 1869
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1870 RGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1908
>gi|301772384|ref|XP_002921605.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 1977
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 809 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 868
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 869 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 900
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1572 ALRHYYFTVGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1631
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1632 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1671
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1256 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1316 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1350
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|291389169|ref|XP_002711236.1| PREDICTED: voltage-gated sodium channel alpha subunit-like isoform
1 [Oryctolagus cuniculus]
Length = 1980
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|432959048|ref|XP_004086162.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Oryzias latipes]
Length = 1743
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 569 YFQEGWNCFDGFIVTLSLVELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 628
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 629 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 658
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1332 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1391
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1392 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1430
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 196 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 252
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 253 LSDVMILTVFCLSVFALIGLQLF 275
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1016 YFTNAWCWLDFFIVDVSIVTLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1075
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ Y E F P+ V
Sbjct: 1076 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETAEELFQPEVV 1127
>gi|407813863|gb|AFU35097.1| voltage-gated sodium channel alpha subunit, partial [Tetranychus
urticae]
Length = 1806
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN+FD I+V SL+++ E V GLSVLR RL SW T+ +L++I+ T
Sbjct: 686 YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKSWPTLNLLITIMGKT 745
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+G LGNLTFVL I+++IFAV+GMQLF +Y+ +
Sbjct: 746 LGDLGNLTFVLAIIVFIFAVMGMQLFGANYSKK 778
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLR-------LSWTT-MKVLLS 53
YF W D I+V S ++L EF + +R LR +S + M+V+++
Sbjct: 1337 YFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAFKTMRTLRAFRPLRAMSRSKGMRVVVN 1396
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
+I I A+ N+ V +I IFA++G+QLF+ + T EK P+ +
Sbjct: 1397 ALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGKFSYCRDRNTEEKSDPNEI 1448
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVV-----TASLVDLMTEFVDGLSVLRGLRL-----------SW 45
AL YF+ WN+FD ++V +++L D + ++ ++LR +R+
Sbjct: 1650 ALRFHYFREPWNVFDFVIVILSIASSALKDFVENYLISPTLLRVVRVVKIGRVLRLVKGA 1709
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1710 RGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1748
>gi|354500749|ref|XP_003512460.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Cricetulus griseus]
Length = 1937
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIF +VV S+V D++ ++ ++ R +RL+
Sbjct: 1532 ALRHYYFTIGWNIFVFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1591
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1592 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1631
>gi|119578603|gb|EAW58199.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_c
[Homo sapiens]
Length = 1760
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 593 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 652
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 653 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 684
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1355 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1414
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1415 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1454
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|291389171|ref|XP_002711237.1| PREDICTED: voltage-gated sodium channel alpha subunit-like isoform
2 [Oryctolagus cuniculus]
Length = 1980
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1575 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1634
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1635 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1674
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1259 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1318
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1319 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1353
>gi|149032008|gb|EDL86920.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_c [Rattus norvegicus]
Length = 1761
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 593 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 652
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 653 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 684
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1356 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1415
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1416 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1455
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1040 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1099
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1100 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1134
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|119631735|gb|EAX11330.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_b
[Homo sapiens]
Length = 1881
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 686 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 745
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 746 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 777
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1465 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1524
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1525 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1559
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 152
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1137 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1196
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1197 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1231
>gi|117414174|ref|NP_001070967.1| sodium channel protein type 8 subunit alpha isoform 1 [Mus
musculus]
Length = 1978
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
>gi|172072624|ref|NP_035453.2| sodium channel protein type 8 subunit alpha isoform 2 [Mus
musculus]
Length = 1978
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|148672123|gb|EDL04070.1| sodium channel, voltage-gated, type VIII, alpha, isoform CRA_b [Mus
musculus]
Length = 1978
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|380802719|gb|AFE73235.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 754
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 602 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 661
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 662 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 693
>gi|345791969|ref|XP_003433569.1| PREDICTED: sodium channel protein type 8 subunit alpha [Canis lupus
familiaris]
Length = 1939
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1534 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1593
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1594 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1633
>gi|34098761|sp|Q9WTU3.1|SCN8A_MOUSE RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|4426569|gb|AAD20438.1| neuronal voltage-gated sodium channel alpha subunit [Mus musculus]
Length = 1978
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|407813865|gb|AFU35098.1| voltage-gated sodium channel alpha subunit, partial [Tetranychus
urticae]
Length = 1806
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN+FD I+V SL+++ E V GLSVLR RL SW T+ +L++I+ T
Sbjct: 686 YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKSWPTLNLLITIMGKT 745
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+G LGNLTFVL I+++IFAV+GMQLF +Y+ +
Sbjct: 746 LGDLGNLTFVLAIIVFIFAVMGMQLFGANYSKK 778
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLR-------LSWTT-MKVLLS 53
YF W D I+V S ++L EF + +R LR +S + M+V+++
Sbjct: 1337 YFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAFKTMRTLRAFRPLRAMSRSKGMRVVVN 1396
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKFAPDPV 98
+I I A+ N+ V +I IFA++G+QLF+ + T EK P+ +
Sbjct: 1397 ALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGKFSYCRDRNTEEKSDPNEI 1448
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVV-----TASLVDLMTEFVDGLSVLRGLRL-----------SW 45
AL YF+ WN+FD ++V +++L D + ++ ++LR +R+
Sbjct: 1650 ALRFHYFREPWNVFDFVIVILSIASSALKDFVENYLISPTLLRVVRVVKIGRVLRLVKGA 1709
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1710 RGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1748
>gi|149639506|ref|XP_001512785.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Ornithorhynchus anatinus]
Length = 1957
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|354500747|ref|XP_003512459.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Cricetulus griseus]
Length = 1978
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIF +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFVFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|149639504|ref|XP_001512814.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Ornithorhynchus anatinus]
Length = 1957
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|145933723|gb|ABP98939.1| voltage-gated sodium channel alpha type V [Oncorhynchus mykiss]
Length = 742
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T+ L+ II ++
Sbjct: 580 YFQQGWNIFDSIIVCFSLMELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 639
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I++ IFAV+GMQLF K+Y
Sbjct: 640 VGALGNLTLVLAIIVSIFAVVGMQLFGKNY 669
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 6 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 62
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 63 LADVMILTVFCLSVFALIGLQLF 85
>gi|119578604|gb|EAW58200.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_d
[Homo sapiens]
Length = 1229
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 62 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 121
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 122 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 153
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 824 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 883
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 884 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 923
>gi|354500745|ref|XP_003512458.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Cricetulus griseus]
Length = 1978
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 810 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 870 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 901
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIF +VV S+V D++ ++ ++ R +RL+
Sbjct: 1573 ALRHYYFTIGWNIFVFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1632
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1633 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1257 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1316
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1317 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1351
>gi|24371298|ref|NP_571703.1| sodium channel, voltage-gated, type VIII, alpha a [Danio rerio]
gi|10505341|gb|AAG18440.1|AF297658_1 sodium channel protein Scn8a [Danio rerio]
Length = 1949
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 781 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 840
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 841 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 871
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V DL+ ++ ++ R +RL+
Sbjct: 1544 ALRHYYFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1603
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1604 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1643
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFMVISMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1228 YFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1287
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ +F+ Y
Sbjct: 1288 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGKY 1322
>gi|395540609|ref|XP_003772245.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Sarcophilus harrisii]
Length = 1979
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1673
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1258 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1317
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1318 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1352
>gi|395540607|ref|XP_003772244.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Sarcophilus harrisii]
Length = 1979
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1673
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1258 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1317
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1318 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1352
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|380805227|gb|AFE74489.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 890
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 738 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 797
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 798 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 829
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 111 WNWLDFSVIVMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 167
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 168 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 204
>gi|309753885|gb|ADO86244.1| voltage-dependent sodium channel SCN8A [Lepidosiren paradoxa]
Length = 1196
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 596 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 655
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 656 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 685
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V S+V L+ + L LR LR + M+V+++
Sbjct: 1043 YFTNAWCWLDFLIVDVSIVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1102
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1103 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1137
>gi|3320596|gb|AAC26513.1| voltage-gated sodium channel alpha subunit [Heliothis virescens]
gi|3320623|gb|AAC26517.1| voltage-gated sodium channel alpha subunit [Heliothis virescens]
Length = 1695
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW + +++SI+ T
Sbjct: 651 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 710
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 711 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 753
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1444 ALRYHYFVEPWNLFDFVVVNFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1503
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1504 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1542
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1134 YFTNAWCWLDFIIVMVSLINFVAGLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1193
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1194 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1228
>gi|395540611|ref|XP_003772246.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Sarcophilus harrisii]
Length = 1938
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 812 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 871
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 872 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 903
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1533 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1592
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1593 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1632
>gi|380805619|gb|AFE74685.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 890
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 738 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 797
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 798 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 829
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 111 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 167
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 168 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 204
>gi|281348730|gb|EFB24314.1| hypothetical protein PANDA_010521 [Ailuropoda melanoleuca]
Length = 1916
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 749 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 808
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 809 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 840
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1511 ALRHYYFTVGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1570
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1571 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1610
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1196 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1255
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1256 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1290
>gi|209361483|gb|ACI43362.1| voltage-sensitive sodium channel alpha-subunit [Cimex lectularius]
Length = 2027
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E + GLSVLR RL SW T+ +L+SI+ T
Sbjct: 862 YFQEGWNIFDFIIVALSLLELSLEGIQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 921
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 922 VGALGNLTFVLCIIIFIFAVMGMQLFGKNY 951
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1650 ALRYHYFKEPWNLFDFVVVLLSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1709
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1710 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1748
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1340 YFTNAWCWLDFIIVMVSLINFTASMLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1399
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1400 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1434
>gi|326922828|ref|XP_003207646.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Meleagris gallopavo]
Length = 1352
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 443 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 502
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 503 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 534
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 894 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 953
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY-------TSEKF 93
++ I ++ N+ V +I IF+++G+ LF+ + T E+F
Sbjct: 954 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERF 1000
>gi|14165232|gb|AAK55441.1| Nav1.6b [Sternopygus macrurus]
Length = 743
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 38 YFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 97
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 98 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 129
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 485 YFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 544
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 545 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 579
>gi|148672122|gb|EDL04069.1| sodium channel, voltage-gated, type VIII, alpha, isoform CRA_a [Mus
musculus]
Length = 1761
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 593 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 652
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 653 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 684
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1356 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1415
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1416 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1455
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1040 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1099
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1100 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1134
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|301619885|ref|XP_002939316.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1589
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD ++V+ SL++L G SVLR RL SW T+ L+ II ++
Sbjct: 802 YFQEGWNIFDGLIVSLSLMELGLSSTGGFSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNS 861
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 862 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 891
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D I+V SLV L+ + L LR LR LS + M+V+++
Sbjct: 1256 YFTNAWCWLDFIIVDISLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1315
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1316 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1350
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD-----GLSVLRGLRLSWTT-----MKVLLSIIISTIGA 61
WN D V+ + V TEFV+ L R LR T +K ++ +I ++
Sbjct: 190 WNWLDFSVIVLAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
>gi|119578606|gb|EAW58202.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_f
[Homo sapiens]
Length = 1596
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 429 YFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 488
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 489 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 520
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1191 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1250
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1251 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1290
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 59 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 115
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 116 LSDVMILTVFCLSVFALIGLQLF 138
>gi|348521366|ref|XP_003448197.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oreochromis niloticus]
Length = 1957
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 785 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 875
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1549 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1608
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1609 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1647
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1233 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1292
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAPDPV 98
++ I ++ N+ V +I IF+++G+ LF+ Y TSE++ P V
Sbjct: 1293 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEEYFPTDV 1343
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 197 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 253
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 254 LSDVMILTVFCLSVFALIGLQLF 276
>gi|57232194|gb|AAW47778.1| voltage-gated sodium channel [Ambystoma tigrinum]
Length = 103
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L + V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 8 YFQEGWNIFDGFIVSLSLMELGLQDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 67
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 68 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 99
>gi|951126|gb|AAC52242.1| SCN8A [Mus musculus]
gi|1586351|prf||2203417A voltage gated Na channel Scn8a
Length = 1732
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 564 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 623
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 624 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 655
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1327 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1386
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1387 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1426
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1011 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1070
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1071 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1105
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|47228731|emb|CAG07463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1983
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 796 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 855
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 856 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 886
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V D++ ++ ++ R +RL+
Sbjct: 1574 ALRHYYFTNGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1633
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1634 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1672
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1244 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1303
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1304 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1338
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 197 WNWLDFMVISMAYI---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 253
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 254 LSDVMILTVFCLSVFALIGLQLF 276
>gi|395540613|ref|XP_003772247.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Sarcophilus harrisii]
Length = 1734
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 567 YFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 626
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 627 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 658
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1329 ALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGA 1388
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 1389 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 1428
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
+F W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1013 FFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1072
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ Y
Sbjct: 1073 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY 1107
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+ + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 194 WNWLDFSVIMMAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LSDVMILTVFCLSVFALIGLQLF 273
>gi|410899316|ref|XP_003963143.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Takifugu rubripes]
Length = 1956
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 783 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 842
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 843 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 873
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1547 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1606
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1607 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1645
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1231 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1290
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y TSE+ P
Sbjct: 1291 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEEMFP 1338
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 195 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 251
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 252 LSDVMILTVFCLSVFALIGLQLF 274
>gi|410899318|ref|XP_003963144.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Takifugu rubripes]
Length = 1959
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 783 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 842
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 843 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 873
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1550 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1609
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1610 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1648
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1234 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1293
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y TSE+ P
Sbjct: 1294 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEEMFP 1341
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 195 WNWLDFMVISMAYI---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 251
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 252 LSDVMILTVFCLSVFALIGLQLF 274
>gi|531237|dbj|BAA07195.1| sodium channel alpha subunit [Takifugu rubripes]
Length = 1717
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 577 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 636
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 637 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYK 667
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1341 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1400
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1401 KGIRTLLFALMMSLPALLNIGLLLFLVMFIFSIFGMSNF 1439
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1025 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1084
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y TSE+ P
Sbjct: 1085 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEEMFP 1132
>gi|390476495|ref|XP_002807721.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Callithrix jacchus]
Length = 2016
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVVLSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|255522923|ref|NP_001157367.1| sodium channel protein type 5 subunit alpha [Equus caballus]
Length = 2019
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSELRY 870
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|148888458|gb|ABR15763.1| Nav1.5 Na+ channel [Homo sapiens]
Length = 2016
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ A N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPAPFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCHIFWLIFSIMGVNLFAGKF 1360
>gi|408723849|gb|AFU86354.1| voltage-gated sodium channel, partial [Laodelphax striatella]
Length = 190
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 3 YFQEGWNIFDFIIVALSLLELSLEGVQGLSVLRSFRLLRVFRLAKSWPTLNLLISIMGRT 62
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 63 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDNVDRFPDGDMP 105
>gi|160700812|gb|ABX47009.1| voltage-gated sodium channel domain IIS1-IIS6 [Aedes aegypti]
gi|160700814|gb|ABX47010.1| voltage-gated sodium channel domain IIS1-IIS6 [Aedes aegypti]
Length = 271
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 101 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 160
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 161 MGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPDKDLP 203
>gi|311698081|gb|ADQ00335.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Myomyrus macrops]
Length = 967
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD I+VT S+V+++ V+GLSVLR RL SW T +LL+II ++
Sbjct: 37 YFQVGWNVFDSIIVTMSMVEMVFADVEGLSVLRSFRLPRVFKLAKSWPTPNMLLTIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALG LT VL I+++IFAV+GMQLF+K+Y
Sbjct: 97 VGALGILTVVLAIIVFIFAVVGMQLFAKNYKD 128
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW---------- 45
+AL +F GWN+FD +VV S + DL+ ++ ++ R +RL+
Sbjct: 798 IALRQYFFTIGWNVFDFVVVIFSVASMLVADLIEKYFVSPTLFRVVRLARIGRVLRLIKG 857
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++IF++ GM F+
Sbjct: 858 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFA 898
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 486 YFTNSWCWLDFLIVDVSLVSLAASLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVN 545
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ + A+ N+ V +I IF+++G+ LF+
Sbjct: 546 ALVGAVPAIFNVMLVCLIFWLIFSIMGVNLFA 577
>gi|410899320|ref|XP_003963145.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Takifugu rubripes]
Length = 1742
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 566 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 625
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K+Y
Sbjct: 626 VGALGNLTLVLAIIVFIFAVVGMQLFGKNY 655
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1333 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1392
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1393 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1431
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1017 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1076
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LF+ Y TSE+ P
Sbjct: 1077 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEEMFP 1124
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 195 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 251
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 252 LSDVMILTVFCLSVFALIGLQLF 274
>gi|355746804|gb|EHH51418.1| hypothetical protein EGM_10784 [Macaca fascicularis]
Length = 2017
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1582 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRAA 1641
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1642 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1681
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1265 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1324
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1325 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|402860603|ref|XP_003894715.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Papio anubis]
Length = 1984
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|403278722|ref|XP_003930941.1| PREDICTED: sodium channel protein type 5 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 2015
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANF 1678
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|402860601|ref|XP_003894714.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Papio anubis]
Length = 1999
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1564 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1623
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1624 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1663
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1265 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1324
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1325 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|148888460|gb|ABR15764.1| Nav1.5 Na+ channel [Homo sapiens]
Length = 1998
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1563 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1622
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ A N+ +L +V++I+++ GM F+
Sbjct: 1623 KGIRTLLFALMMSLPAPFNIGLLLFLVMFIYSIFGMANFA 1662
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCHIFWLIFSIMGVNLFAGKF 1360
>gi|62087312|dbj|BAD92103.1| voltage-gated sodium channel type V alpha isoform b variant [Homo
sapiens]
Length = 1576
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 355 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 414
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 415 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 446
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1141 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYSFSPTLFRVIRLARIGRILRLIRGA 1200
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1201 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1240
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 842 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 901
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 902 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 938
>gi|402860597|ref|XP_003894712.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Papio anubis]
Length = 2017
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1582 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1641
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1642 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1681
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1265 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1324
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1325 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1361
>gi|426339986|ref|XP_004033916.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Gorilla gorilla gorilla]
Length = 1983
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
>gi|189172247|gb|ACD80428.1| para sodium channel alpha subunit variant 4 [Bombyx mandarina]
Length = 1840
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E GLSVLR RL SW + +++SI+ T
Sbjct: 815 YFQEGWNIFDFIIVALSLLELGLEGAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 874
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 875 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 917
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1608 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1667
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1668 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1706
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1298 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1357
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1358 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1392
>gi|441611869|ref|XP_003257315.2| PREDICTED: sodium channel protein type 5 subunit alpha [Nomascus
leucogenys]
Length = 1990
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 735 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 794
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 795 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 826
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1555 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1614
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1615 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1654
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1222 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1281
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1282 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1318
>gi|311698085|gb|ADQ00337.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Gymnarchus niloticus]
Length = 970
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWN+FD +VT SLV+L V GLSVLR RL SW T+ L+ II ++
Sbjct: 37 YFQAGWNVFDSFIVTLSLVELGLADVQGLSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I++++FAV+GMQLF K Y
Sbjct: 97 VGALGNLTVVLAIIVFVFAVVGMQLFGKSYKD 128
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWTT--------- 47
AL + +F GWN+FD +VV S L DL+ ++ ++ R +RL+
Sbjct: 802 ALRHYFFTIGWNVFDFVVVIVSIAGTMLSDLIEKYFVSPTLFRFIRLARIGRILRIIRGA 861
Query: 48 --MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
+++LL ++ ++ AL N+ +L ++++IF++ M F+
Sbjct: 862 RGIRMLLFALMMSLPALFNIGLLLFLIMFIFSIFAMSNFA 901
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 488 YFTNAWCWLDFVIVDVSLISLTANLMGYSELGAIKSLRTLRALRPLRALSRFDGMRVVVN 547
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I A+ N+ V +I IF+++G+ LF+ +
Sbjct: 548 ALLGAIPAIFNVLLVCMIFWLIFSIMGVNLFAGKF 582
>gi|237512982|ref|NP_001153633.1| sodium channel protein type 5 subunit alpha isoform f [Homo
sapiens]
Length = 1962
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1527 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1586
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1587 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1626
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1210 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1269
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
>gi|189172243|gb|ACD80426.1| para sodium channel alpha subunit variant 2 [Bombyx mandarina]
Length = 1851
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E GLSVLR RL SW + +++SI+ T
Sbjct: 826 YFQEGWNIFDFIIVALSLLELGLEGAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 886 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 928
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1619 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1678
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1679 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1717
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1309 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1368
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1369 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1403
>gi|189172241|gb|ACD80425.1| para sodium channel alpha subunit variant 1 [Bombyx mandarina]
Length = 1864
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E GLSVLR RL SW + +++SI+ T
Sbjct: 826 YFQEGWNIFDFIIVALSLLELGLEGAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 886 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 928
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1632 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1691
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1692 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1730
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1322 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1381
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1382 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1416
>gi|187954621|gb|AAI40814.1| SCN5A protein [Homo sapiens]
gi|219521582|gb|AAI44622.1| SCN5A protein [Homo sapiens]
Length = 1983
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
>gi|148833296|gb|ABR14545.1| voltage-gated sodium channel type V alpha subunit [Rattus
norvegicus]
Length = 2016
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
>gi|237512980|ref|NP_001153632.1| sodium channel protein type 5 subunit alpha isoform e [Homo
sapiens]
Length = 1983
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
>gi|150417969|ref|NP_001092875.1| sodium channel protein type 5 subunit alpha isoform d [Homo
sapiens]
Length = 1998
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1563 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1622
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1623 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1662
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|150417967|ref|NP_001092874.1| sodium channel protein type 5 subunit alpha isoform c [Homo
sapiens]
Length = 2016
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|402860595|ref|XP_003894711.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Papio anubis]
Length = 2016
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|189172245|gb|ACD80427.1| para sodium channel alpha subunit variant 3 [Bombyx mandarina]
Length = 1810
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E GLSVLR RL SW + +++SI+ T
Sbjct: 826 YFQEGWNIFDFIIVALSLLELGLEGAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 886 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDYVDRFPDGDLP 928
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1578 ALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1637
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1638 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1676
>gi|350536969|ref|NP_001233256.1| sodium channel protein type 5 subunit alpha [Monodelphis domestica]
gi|342837663|tpg|DAA34921.1| TPA_inf: voltage-dependent sodium channel SCN5A [Monodelphis
domestica]
Length = 1840
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 800 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 859
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 860 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 891
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 192 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 248
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 249 LADVMVLTVFCLSVFALIGLQLF 271
>gi|348556690|ref|XP_003464154.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Cavia porcellus]
Length = 1982
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1261 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1320
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1321 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1357
>gi|297286126|ref|XP_002808375.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Macaca mulatta]
Length = 2003
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1568 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1627
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1628 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1667
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1261 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1320
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1321 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1357
>gi|426339982|ref|XP_004033914.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Gorilla gorilla gorilla]
Length = 1962
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1527 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1586
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1587 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1626
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1210 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1269
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
>gi|426339980|ref|XP_004033913.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Gorilla gorilla gorilla]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|44886084|dbj|BAD12085.1| TTX-resistant sodium channel splicing variant [Homo sapiens]
Length = 1962
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1527 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1586
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1587 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1626
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1210 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1269
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
>gi|426339984|ref|XP_004033915.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Gorilla gorilla gorilla]
Length = 1998
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1563 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1622
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1623 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1662
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|402860599|ref|XP_003894713.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Papio anubis]
Length = 1962
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1527 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1586
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1587 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1626
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1210 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1269
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
>gi|397511556|ref|XP_003826137.1| PREDICTED: sodium channel protein type 5 subunit alpha [Pan
paniscus]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|44886082|dbj|BAD12084.1| TTX-resistant sodium channel [Homo sapiens]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|37622907|ref|NP_932173.1| sodium channel protein type 5 subunit alpha isoform a [Homo
sapiens]
gi|215273881|sp|Q14524.2|SCN5A_HUMAN RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=HH1; AltName: Full=Sodium channel protein cardiac
muscle subunit alpha; AltName: Full=Sodium channel
protein type V subunit alpha; AltName:
Full=Voltage-gated sodium channel subunit alpha Nav1.5
gi|260158894|gb|ACX32327.1| voltage-gated sodium channel type V alpha isoform a [synthetic
construct]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|30089970|ref|NP_000326.2| sodium channel protein type 5 subunit alpha isoform b [Homo
sapiens]
gi|24559815|gb|AAN61120.1| cardiac sodium channel alpha subunit Nav1.5 [Homo sapiens]
gi|124302208|gb|ABN05288.1| sodium channel, voltage-gated, type V, alpha (long QT syndrome 3)
[Homo sapiens]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|184039|gb|AAA58644.1| sodium channel alpha subunit [Homo sapiens]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|348556686|ref|XP_003464152.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Cavia porcellus]
Length = 1997
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1561 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1620
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1621 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1660
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1262 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1321
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1322 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1358
>gi|348556684|ref|XP_003464151.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Cavia porcellus]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1579 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1638
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1639 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1678
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1262 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1321
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1322 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1358
>gi|209361485|gb|ACI43363.1| voltage-sensitive sodium channel alpha-subunit [Cimex lectularius]
Length = 2027
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E + GLSVLR RL SW T+ +L+SI+ T
Sbjct: 862 YFQEGWNIFDFIIVALSLLELSLEGIQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 921
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GA+GNLTFVL I+I+IFAV+GMQLF K+Y
Sbjct: 922 VGAIGNLTFVLCIIIFIFAVMGMQLFGKNY 951
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF+ WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1650 ALRYHYFKEPWNLFDFVVVLLSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1709
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1710 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1748
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1340 YFTNAWCWLDFIIVMVSLINFTASMLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1399
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1400 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1434
>gi|148833298|gb|ABR14546.1| voltage-gated sodium channel type V alpha subunit variant [Rattus
norvegicus]
Length = 1963
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1527 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1586
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1587 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1626
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1210 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1269
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1306
>gi|29569618|gb|AAO91669.1|AF482988_1 cardiac sodium channel alpha subunit [Homo sapiens]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|15072487|gb|AAK74065.1| voltage-gated sodium channel type V alpha subunit jejunal variant
[Homo sapiens]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|146048457|gb|ABQ01244.1| sodium channel protein type V alpha subunit [Homo sapiens]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|348556682|ref|XP_003464150.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Cavia porcellus]
Length = 2014
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1578 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1637
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1638 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1677
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1261 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1320
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1321 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1357
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|426339978|ref|XP_004033912.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Gorilla gorilla gorilla]
Length = 2015
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1580 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1639
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1640 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1679
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1263 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1322
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1323 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1359
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|410352287|gb|JAA42747.1| sodium channel, voltage-gated, type V, alpha subunit [Pan
troglodytes]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|410036705|ref|XP_001171891.2| PREDICTED: sodium channel protein type 5 subunit alpha [Pan
troglodytes]
Length = 2016
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1581 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1640
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1641 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1680
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1264 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1323
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1324 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1360
>gi|432866205|ref|XP_004070737.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oryzias latipes]
Length = 1902
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WN FD +VT SLV+L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 729 YFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 788
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 789 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYK 819
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF GWNIFD++VV S+V DL+ ++ ++ R +RL+
Sbjct: 1493 ALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA 1552
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++IF++ GM F
Sbjct: 1553 KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNF 1591
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D +V++ + + TEFVD +S LR R+ +K ++ +I ++
Sbjct: 195 WNWLDFMVISMAYI---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 251
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 252 LSDVMILTVFCLSVFALIGLQLF 274
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D +V S+V L+ + L LR LR + M+V+++
Sbjct: 1177 YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN 1236
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKF 93
++ I ++ N+ V +I IF+++G+ +F+ Y TSE++
Sbjct: 1237 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGKYGYCFNDTSEEY 1282
>gi|14165226|gb|AAK55438.1| Nav1.5La [Sternopygus macrurus]
Length = 742
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L V+GLSVLR RL SW T L+ II ++
Sbjct: 38 YFQQGWNIFDGIIVCLSLMELGLSSVEGLSVLRSFRLLRVFKLAKSWPTPNTLIKIIGNS 97
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 98 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYQ 128
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFV--------DGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L+ FV + LR R + M+V+++
Sbjct: 464 YFTNYWCWLDFLIVDVSLISLVANFVGYSDFGAIKSIRTLRAFRPLRALSRFEGMQVVVN 523
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 524 ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 558
>gi|410971648|ref|XP_003992277.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Felis catus]
Length = 2017
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 775 YFQXGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 834
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 835 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 866
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|440901586|gb|ELR52498.1| Sodium channel protein type 5 subunit alpha [Bos grunniens mutus]
Length = 2027
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 785 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 876
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1590 VALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1649
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1650 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1690
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1274 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1333
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1334 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1370
>gi|351713933|gb|EHB16852.1| Sodium channel protein type 5 subunit alpha [Heterocephalus glaber]
Length = 2017
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 773 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 832
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 833 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 864
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1262 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFSEMGPIKSLRTLRALRPLRALSRFEGMRVV 1321
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1322 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1358
>gi|311268687|ref|XP_003132157.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
4 [Sus scrofa]
Length = 1988
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|311268681|ref|XP_003132156.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
3 [Sus scrofa]
Length = 2003
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1567 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1626
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1627 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1666
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1268 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1327
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|426249080|ref|XP_004018280.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Ovis aries]
Length = 1824
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 780 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 839
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 840 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 871
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|355559772|gb|EHH16500.1| hypothetical protein EGK_11788 [Macaca mulatta]
Length = 1810
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 642 YFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 701
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 702 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 733
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1375 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1434
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1435 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1474
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1076 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1135
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1136 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1172
>gi|359718971|ref|NP_001240789.1| sodium channel protein type 5 subunit alpha isoform 2 [Mus
musculus]
Length = 2020
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|341942012|sp|Q9JJV9.2|SCN5A_MOUSE RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=Sodium channel protein cardiac muscle subunit
alpha; AltName: Full=Sodium channel protein type V
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.5; AltName: Full=mH1
Length = 2019
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|348556692|ref|XP_003464155.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 6
[Cavia porcellus]
Length = 1961
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1525 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1584
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1585 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1624
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1208 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1267
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1268 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1304
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|311268677|ref|XP_003132154.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
1 [Sus scrofa]
Length = 2020
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|348556688|ref|XP_003464153.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Cavia porcellus]
Length = 1961
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 772 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 831
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 832 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 863
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1525 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1584
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1585 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1624
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1208 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1267
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1268 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1304
>gi|149018261|gb|EDL76902.1| rCG25073, isoform CRA_a [Rattus norvegicus]
Length = 2019
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 777 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 836
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 837 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 868
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 194 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LADVMVLTVFCLSVFALIGLQLF 273
>gi|6782382|emb|CAB70096.1| voltage-gated sodium channel [Mus musculus]
Length = 2019
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|84875498|ref|NP_067519.2| sodium channel protein type 5 subunit alpha isoform 1 [Mus
musculus]
gi|74181052|dbj|BAE27800.1| unnamed protein product [Mus musculus]
gi|74184727|dbj|BAE27966.1| unnamed protein product [Mus musculus]
gi|225000576|gb|AAI72643.1| Sodium channel, voltage-gated, type V, alpha [synthetic construct]
Length = 2020
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|311268679|ref|XP_003132155.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
2 [Sus scrofa]
Length = 2021
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1585 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1644
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1645 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1684
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1268 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1327
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1328 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1364
>gi|432092524|gb|ELK25139.1| Sodium channel protein type 5 subunit alpha [Myotis davidii]
Length = 1845
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 777 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 836
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 837 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 868
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1486 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1545
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1546 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1585
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1169 KKYFTNAWCWLDFLIVNVSLISLVANTLGFSEMGPIKSLRTLRALRPLRALSRFEGMRVV 1228
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1229 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1265
>gi|6981514|ref|NP_037257.1| sodium channel protein type 5 subunit alpha isoform 1 [Rattus
norvegicus]
gi|116452|sp|P15389.1|SCN5A_RAT RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=Sodium channel protein cardiac muscle subunit
alpha; AltName: Full=Sodium channel protein type V
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.5
gi|206858|gb|AAA42114.1| sodium channel alpha-subunit [Rattus norvegicus]
Length = 2019
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 777 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 836
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 837 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 868
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 194 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 250
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 251 LADVMVLTVFCLSVFALIGLQLF 273
>gi|148677260|gb|EDL09207.1| mCG126205 [Mus musculus]
Length = 2019
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 867
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1583 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1642
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1643 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1682
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|355564939|gb|EHH21428.1| hypothetical protein EGK_04494 [Macaca mulatta]
Length = 2009
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 9/91 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRG---------LRLSWTTMKVLLSIIIS 57
YFQ GWNIFD +VT SLV+L V+GLSVLR L SW T+ +L+ II +
Sbjct: 827 YFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSSFSMLRVFKLAKSWPTLNMLIKIIGN 886
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 887 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 917
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L + YF GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1594 ISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1653
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1654 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1694
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 190 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 246
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 247 LSDVMILTVFCLSVFALIGLQLF 269
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1280 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1339
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1340 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1374
>gi|237512985|ref|NP_001153634.1| sodium channel protein type 5 subunit alpha isoform 2 [Rattus
norvegicus]
gi|13774490|gb|AAK38884.1| sodium channel Nav1.5a [Rattus norvegicus]
Length = 1966
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 777 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 836
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 837 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 868
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1530 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1629
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1213 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1272
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1273 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1309
>gi|149018262|gb|EDL76903.1| rCG25073, isoform CRA_b [Rattus norvegicus]
Length = 1966
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 777 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 836
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 837 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 868
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1530 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1629
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1213 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1272
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1273 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1309
>gi|8394242|ref|NP_058943.1| sodium channel protein type 10 subunit alpha [Rattus norvegicus]
gi|1209467|emb|CAA63095.1| volatage-gated sodium channel [Rattus norvegicus]
Length = 1957
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR LRL SW T+ L+ II ++
Sbjct: 724 YFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTLRLLRVFKLAKSWPTLNTLIKIIGNS 783
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S+DY K
Sbjct: 784 VGALGNLTFILAIIVFIFALVGKQLLSEDYGCRK 817
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 275
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1531 ALRQYYFTNGWNVFDFIVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIR 1590
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1591 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1633
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1215 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1274
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1275 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSK 1311
>gi|311268685|ref|XP_003132158.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
5 [Sus scrofa]
Length = 1967
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1531 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1590
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1591 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1630
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1214 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1273
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1274 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1310
>gi|1586352|prf||2203418A voltage-gated Na channel
Length = 2007
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR LRL SW T+ L+ II ++
Sbjct: 724 YFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTLRLLRVFKLAKSWPTLNTLIKIIGNS 783
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S+DY K
Sbjct: 784 VGALGNLTFILAIIVFIFALVGKQLLSEDYGCRK 817
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 275
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1531 ALRQYYFTNGWNVFDFIVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIR 1590
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1591 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1633
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1215 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1274
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1275 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSK 1311
>gi|311268683|ref|XP_003132159.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
6 [Sus scrofa]
Length = 1967
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 870
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1531 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1590
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1591 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1630
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1214 KKYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1273
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1274 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1310
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|444525849|gb|ELV14177.1| Sodium channel protein type 4 subunit alpha [Tupaia chinensis]
Length = 1856
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 588 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 647
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 648 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 679
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1082 QKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1141
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1142 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1178
>gi|321470417|gb|EFX81393.1| hypothetical protein DAPPUDRAFT_50150 [Daphnia pulex]
Length = 2057
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 826 YFREGWNIFDFIIVFLSLLELGLEGVSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKT 885
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLTFVL I+I+IFAV+GMQLF K+Y ++F +P
Sbjct: 886 VGALGNLTFVLCIIIFIFAVMGMQLFGKNYIDNVDRFPNKELP 928
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVL 51
+YF W D I+V SLV+ + G L LR LR + M+V+
Sbjct: 1326 KNYFTNAWCWLDFIIVMVSLVNYVASLFGGGKIQAFKTMRTLRALRPLRALARFQGMRVV 1385
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I+ IFA++G+Q+F+ Y
Sbjct: 1386 VNALIQAIPSIFNVLLVCLILWLIFAIMGVQMFAGKY 1422
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF+ WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1641 ALRHYYFKEPWNLFDFVVVILSILGMVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1700
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A+ GM F
Sbjct: 1701 KGIRTLLFALAMSLPALFNICLLLFLVMFIYAIFGMSFF 1739
>gi|395517038|ref|XP_003762689.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Sarcophilus harrisii]
Length = 1761
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 774 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 833
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K+Y+
Sbjct: 834 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSE 865
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1576 IALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1635
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
+ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1636 AKGISTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1676
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1260 KKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1319
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1320 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1356
>gi|2231545|gb|AAC12793.1| para-like sodium channel, partial [Haematobia irritans]
Length = 316
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 11 GWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGAL 62
GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GAL
Sbjct: 2 GWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGAL 61
Query: 63 GNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
GNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 62 GNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 91
>gi|57335811|emb|CAH23473.1| para-like voltage gated sodium channel [Lepeophtheirus salmonis]
Length = 519
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 11/110 (10%)
Query: 1 MALSNDY-FQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MA+S Y F GWNIFD I+V+ SL++L V GL+VLR RL SW T+ +L
Sbjct: 76 MAMSPKYYFLEGWNIFDFIIVSLSLIELGLVNVSGLTVLRTFRLLRVFKLAKSWPTLNLL 135
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+SI+ T+GALGNLT VL I+I+IFAV+GMQLF K Y ++F +P
Sbjct: 136 ISIMGKTVGALGNLTLVLCIIIFIFAVMGMQLFGKSYVDNIDRFPNKSLP 185
>gi|414091063|gb|AFW98419.1| sodium channel Na-Lv5 [Culex quinquefasciatus]
Length = 2095
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ + +SI+ T
Sbjct: 864 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLPISIMGRT 923
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNLT VL I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 924 VGALGNLTSVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDKDLP 966
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L DL+ ++ ++LR +R++
Sbjct: 1652 ALRYHYFIEPWNLFDFVVVILSILGLVLRDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1711
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1712 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1750
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1342 YFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1401
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1402 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1436
>gi|2231547|gb|AAC12794.1| para-like sodium channel, partial [Haematobia irritans]
Length = 329
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 11 GWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGAL 62
GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GAL
Sbjct: 2 GWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGAL 61
Query: 63 GNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
GNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 62 GNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 91
>gi|197927081|dbj|BAF37096.2| voltage-dependent para-like sodium channel splicing variant 2
[Plutella xylostella]
Length = 1890
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 810 YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 869
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNL FVL I+I+IFAV+GMQLF K+Y
Sbjct: 870 MGALGNLIFVLCIIIFIFAVMGMQLFGKNYVDH 902
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVLLS 53
YF W D I+V SL++ + L LR LR M+V+++
Sbjct: 1307 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1366
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1367 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1401
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN FD +VV S L D++ ++ ++LR +R++
Sbjct: 1617 ALRYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1676
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1677 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1715
>gi|37653217|emb|CAC79236.1| para-like voltage dependent sodium channel [Frankliniella
occidentalis]
Length = 162
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GALG
Sbjct: 1 WNIFDFIIVAMSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NL FVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLVFVLCIIIFIFAVMGMQLFGKNYYDNVDKFPGGEMP 98
>gi|354487631|ref|XP_003505975.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 2001
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1566 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1625
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1626 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1665
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|354487633|ref|XP_003505976.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 1986
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1266 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1325
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1326 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1362
>gi|354487625|ref|XP_003505972.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2019
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|354487623|ref|XP_003505971.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2019
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1584 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1643
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1644 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1683
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1327 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVIVMAYT---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|354487627|ref|XP_003505973.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1965
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1530 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1629
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1213 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1272
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1273 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1309
>gi|311698149|gb|ADQ00369.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b
[Osteoglossum bicirrhosum]
Length = 935
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRLS--------WTTMKVLLSIIIST 58
YFQ G NIFD I+VT SLV+L V+GLSVLR RL W T+ +L+ II ++
Sbjct: 37 YFQVGLNIFDSIIVTLSLVELGLANVEGLSVLRSFRLPRVFKLARPWPTLNMLIEIIGNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+GALGNLT VL IV++IFAV+GMQLF YT
Sbjct: 97 VGALGNLTLVLAIVVFIFAVVGMQLFGSSYT 127
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF GWNIFD IVV S L DL+ ++ ++ R +RL+
Sbjct: 777 ALRQYYFSVGWNIFDFIVVVLSIIGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIRGA 836
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 837 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF 875
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SL+ L + L LR LR + M+V+++
Sbjct: 461 YFTNAWCWLDFLIVDVSLISLTASILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 520
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I A+ N+ V +I IF+++G+ LF+ + TSE+ P
Sbjct: 521 ALVGAIPAIFNVLLVCLIFWLIFSIMGVNLFAGKFFYCLNTTSEERFP 568
>gi|344244728|gb|EGW00832.1| Sodium channel protein type 5 subunit alpha [Cricetulus griseus]
Length = 1929
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 740 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 799
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 800 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 831
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1494 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1553
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1554 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1593
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1177 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1236
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1237 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1273
>gi|354487629|ref|XP_003505974.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 1965
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 776 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 835
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF ++Y+
Sbjct: 836 VGALGNLTLVLAIIVFIFAVVGMQLFGRNYSE 867
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW----------- 45
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1530 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGA 1589
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1629
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SLV L+ + L LR LR + M+V+
Sbjct: 1213 KKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVV 1272
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1273 VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1309
>gi|311698093|gb|ADQ00341.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Gymnotus cylindricus]
Length = 920
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SLV++ + GLSVLR RL SW T+ +L+ II ++
Sbjct: 34 YFQQTWNIFDSIIVTLSLVEMGLANMQGLSVLRSFRLLRIFKLAKSWPTLNILIKIICNS 93
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNLT VL I+I+IFA++G QLF K+Y
Sbjct: 94 VGALGNLTIVLAIIIFIFALVGFQLFGKNYKEN 126
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWTT-------- 47
+AL + YF GWN+FD +VV S L DL+ ++ ++ R +RL+
Sbjct: 780 LALRHRYFTIGWNVFDFVVVIISIAGLLLSDLIEKYFVSPTLFRVIRLAKIARVLRLVKA 839
Query: 48 ---MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 840 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 880
>gi|2231549|gb|AAC12795.1| para-like sodium channel, partial [Haematobia irritans]
Length = 316
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 11 GWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGAL 62
GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI T+GAL
Sbjct: 2 GWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISITGRTMGAL 61
Query: 63 GNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
GNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 62 GNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 91
>gi|2231551|gb|AAC12796.1| para-like sodium channel, partial [Haematobia irritans]
Length = 329
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 11 GWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGAL 62
GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI T+GAL
Sbjct: 2 GWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISITGRTMGAL 61
Query: 63 GNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
GNLTFVL I+I+IFAV+GMQLF K+Y K
Sbjct: 62 GNLTFVLCIIIFIFAVMGMQLFGKNYIDHK 91
>gi|348519861|ref|XP_003447448.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 1975
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+V+ SL++L E + +SVLR RL SW T+ L+ II ++
Sbjct: 798 YFQERWNIFDGIIVSLSLIELCLESLKNMSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNS 857
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 858 VGALGNLTLVLAIIVFIFAVVGMQLFGKKY 887
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGL----SVLRGLRL-----------S 44
++L + +F GWNIFD IVV S++ L +TE ++ ++ R +RL S
Sbjct: 1552 VSLRHYFFMNGWNIFDFIVVILSIIGLFLTEIIEKYFLSPTLFRVIRLARIGRILRLIKS 1611
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+IGM F+
Sbjct: 1612 AKRIRTLLFALMMSLPALFNIGLLLFLVMFIYAIIGMSNFA 1652
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L+ + L LR LR + M+V+++
Sbjct: 1242 YFTNAWCWLDFLIVDVSLVSLVANALGANELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1301
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1302 ALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKF 1336
>gi|311698089|gb|ADQ00339.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Brachyhypopomus pinnicaudatus]
Length = 944
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD +V+ SLV++ + GLSVLR RL SW T+ +L+ II ++
Sbjct: 37 YFQQTWNIFDFFIVSLSLVEMGLANMQGLSVLRSFRLLRIFKLAKSWPTLNILIKIICNS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFA++GMQLF K+Y
Sbjct: 97 VGALGNLTIVLAIIVFIFALVGMQLFGKNYKE 128
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWTT-------- 47
+AL + +F GWN+FD VV S L DL+ ++ ++ R +RL+
Sbjct: 775 LALRHYFFTVGWNVFDFAVVNISIAGLLLSDLIEKYFVSPTLFRVIRLARVARVLRLVRA 834
Query: 48 ---MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 835 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 875
>gi|87128438|gb|ABD22984.1| Nav1.4a [Brachyhypopomus pinnicaudatus]
Length = 797
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD +V+ SLV++ + GLSVLR RL SW T+ +L+ II ++
Sbjct: 43 YFQQTWNIFDFFIVSLSLVEMGLANMQGLSVLRSFRLLRIFKLAKSWPTLNILIKIICNS 102
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFA++GMQLF K+Y
Sbjct: 103 VGALGNLTIVLAIIVFIFALVGMQLFGKNYKE 134
>gi|56748617|sp|Q62968.1|SCNAA_RAT RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 3;
Short=PN3; AltName: Full=Sensory neuron sodium channel;
AltName: Full=Sodium channel protein type X subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.8
gi|1280043|gb|AAC52619.1| sodium channel PN3 [Rattus norvegicus]
gi|1589144|prf||2210320A Na channel:SUBUNIT=alpha
Length = 1956
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 723 YFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 782
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S+DY K
Sbjct: 783 VGALGNLTFILAIIVFIFALVGKQLLSEDYGCRK 816
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 275
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1530 ALRQYYFTNGWNVFDFIVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIR 1589
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1632
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1214 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1273
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1274 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSK 1310
>gi|27806135|ref|NP_776883.1| sodium channel protein type 5 subunit alpha [Bos taurus]
gi|18477465|emb|CAC80974.1| voltage-gated sodium channel alpha subunit [Bos taurus]
gi|296475012|tpg|DAA17127.1| TPA: voltage-gated sodium channel type V alpha [Bos taurus]
Length = 2022
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRG--------LRLSWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR L SW T+ L+ II ++
Sbjct: 779 YFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFCLLRVFKLAKSWPTLNTLIKIIGNS 838
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT VL I+++IFAV+GMQLF K+Y+ ++
Sbjct: 839 VGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 872
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSWTT--------- 47
AL + YF WNIFD +VV S+V D++ ++ ++ R +RL+ +
Sbjct: 1586 ALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARISRILRLIRGA 1645
Query: 48 --MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1646 KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1685
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ ++ TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 193 WNWLDFSVI---IMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 249
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 250 LADVMVLTVFCLSVFALIGLQLF 272
>gi|149018260|gb|EDL76901.1| rCG25223 [Rattus norvegicus]
Length = 1807
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 723 YFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 782
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S+DY K
Sbjct: 783 VGALGNLTFILAIIVFIFALVGKQLLSEDYGCRK 816
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 275
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1381 ALRQYYFTNGWNVFDFIVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIR 1440
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1441 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1483
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL L+ + ++ L LR LR + M+V+
Sbjct: 1063 KKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVV 1122
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+ ++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1123 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSK 1161
>gi|449492116|ref|XP_002186910.2| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Taeniopygia guttata]
Length = 1883
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 782 YFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 841
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 842 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 871
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1448 LALRHYYFTNGWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1507
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1508 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA--YVKKEYGID 1557
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 39/123 (31%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYI---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFS--------KDYT------------------SEKFAP 95
L ++ + V + +FA+IG+QLF +DYT SE+F
Sbjct: 248 LADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTMFNFTNGSLYLDGRTWNNSEEFLS 307
Query: 96 DPV 98
DPV
Sbjct: 308 DPV 310
>gi|405955559|gb|EKC22630.1| Sodium channel protein type 9 subunit alpha [Crassostrea gigas]
Length = 1734
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 8/93 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ GWN FD ++V S +++ + V GLSVLR RL SW T+ +L+ I+ T
Sbjct: 528 YFRDGWNCFDFLIVFLSFLEMALDGVSGLSVLRSFRLLRVFKLARSWQTLNMLIRIVAGT 587
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+GALGNL FVL IV++IFAV+G QLF Y +E
Sbjct: 588 MGALGNLIFVLAIVVFIFAVMGQQLFRDGYIAE 620
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V S+V L+ E + + LR LR W M+V+++
Sbjct: 954 YFTDAWCWLDFVIVGISIVMLVFELLGMEKVGAIKAMRTLRALRPLRAVSRWEGMRVVVN 1013
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V +I IF ++G+Q F+ +
Sbjct: 1014 ALIKAIPSIANVMMVCLIFWLIFGIVGVQFFAGKF 1048
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFV-----------DGLSVLRGLRLS 44
+ L + YF+ WNIFD +VV S++ D+M +F+ + + L S
Sbjct: 1299 IGLRHFYFKFPWNIFDFVVVVLSILGVALSDVMDQFLVSPTLLRVVRVFRVGRVLRLVKS 1358
Query: 45 WTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++I+A GM F
Sbjct: 1359 AKGIRTLLFSLAVSLPALFNIALLLFLVMFIYATFGMSFF 1398
>gi|441648965|ref|XP_003266235.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Nomascus leucogenys]
Length = 2005
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GL LR RL SW T+ +L+ II ++
Sbjct: 818 YFQEGWNIFDGFIVSLSLMELDLANVEGLPSLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 877
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 878 VGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 909
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
++L N F GWNIFD +VV S+V +L+ ++ ++ R +RL+
Sbjct: 1583 ISLRNSXFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKG 1642
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1683
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1269 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1328
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1329 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1363
>gi|348519865|ref|XP_003447450.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 1796
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+V+ SL++L E + +++LR RL SW T+ L+ II ++
Sbjct: 678 YFQKKWNIFDAIIVSLSLIELCLEKMKNMTILRSFRLLRVFKLAKSWPTLNKLIKIIGNS 737
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 738 VGALGNLTLVLAIIVFIFAVVGMQLFGKKYKE 769
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDL-MTEFVDGL----SVLRGLRL-----------SW 45
+L + +F GWNIFD IVV S++ L +TE ++ ++ R +RL S
Sbjct: 1425 SLRHYFFMNGWNIFDFIVVILSIIGLFLTEIIEKYFLSPTLFRVIRLARIGRILRLIKSA 1484
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+IGM F+
Sbjct: 1485 KRIRTLLFALMMSLPALFNIGLLLFLVMFIYAIIGMSNFA 1524
>gi|363729762|ref|XP_001232818.2| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Gallus gallus]
gi|342837679|tpg|DAA34929.1| TPA_inf: voltage-dependent sodium channel SCN10A [Gallus gallus]
Length = 2038
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 785 YFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 874
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1603 LALRHYYFTNGWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1662
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1663 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA--YVKKEYGID 1712
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYI---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFS--------KDYTSEKF 93
L ++ + V + +FA+IG+QLF +DYT F
Sbjct: 248 LADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTQFNF 287
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR + M+V+++
Sbjct: 1289 YFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 1348
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1349 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1383
>gi|449270912|gb|EMC81556.1| Sodium channel protein type 5 subunit alpha [Columba livia]
Length = 2044
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 785 YFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 874
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1609 LALRHYYFTNGWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1668
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1669 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA 1709
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 39/123 (31%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYI---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFS--------KDY------------------TSEKFAP 95
L ++ + V + +FA+IG+QLF +DY TSE+F
Sbjct: 248 LADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTKFNFTNGTLYLDGRMWNTSEEFLS 307
Query: 96 DPV 98
DPV
Sbjct: 308 DPV 310
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR + M+V+++
Sbjct: 1295 YFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 1354
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1355 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1389
>gi|326921486|ref|XP_003206990.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Meleagris gallopavo]
Length = 1959
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 785 YFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 844
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 845 VGALGNLTLVLAIIVFIFAVVGMQLFGKSY 874
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW---------- 45
+AL + YF GWNIFD +VV S+V D++ ++ ++ R +RL+
Sbjct: 1524 LALRHYYFTNGWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRG 1583
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
++ LL ++ ++ AL N+ +L +V++I+A+ GM F+ Y +++ D
Sbjct: 1584 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFA--YVKKEYGID 1633
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSW--------TTMKVLLSIIISTIGA 61
WN D V+ + + TEFVD +S LR R+ + +K ++ +I ++
Sbjct: 191 WNWLDFSVIVMAYI---TEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFS--------KDYTSEKF 93
L ++ + V + +FA+IG+QLF +DYT F
Sbjct: 248 LADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTQFNF 287
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR + M+V+++
Sbjct: 1210 YFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALRPLRALSRFEGMRVVVN 1269
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1270 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1304
>gi|309753883|gb|ADO86243.1| voltage-dependent sodium channel [Lepidosiren paradoxa]
Length = 1179
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDG-LSVLRGLRL--------SWTTMKVLLSIIIS 57
YFQ GWNIFD ++VT SLV+L G LSVLR RL SW T+ L+ II +
Sbjct: 577 YFQQGWNIFDSLIVTLSLVELGLSTSGGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGN 636
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++GALGNLT VL I+++IFAV+GMQLF K Y
Sbjct: 637 SVGALGNLTLVLAIIVFIFAVVGMQLFGKSY 667
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLR-----LSWTTMKVL 51
YF W D ++V S++ L+ +E + L LR LR + M+V+
Sbjct: 1025 KKYFTNAWCWLDFLIVDVSIISLLAAPLGFSELGPIKSLRTLRALRPLRALSRFEGMRVV 1084
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I +IF+++G+ LF+ +
Sbjct: 1085 VNALIGAIPSIMNVLLVCLIFWFIFSIMGVNLFAGKF 1121
>gi|131889984|ref|NP_033160.2| sodium channel protein type 10 subunit alpha isoform 2 [Mus
musculus]
gi|42768804|gb|AAS45602.1| tetrodotoxin resistant sodium channel Nav1.8 [Mus musculus]
gi|162318906|gb|AAI56476.1| Sodium channel, voltage-gated, type X, alpha [synthetic construct]
Length = 1957
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L T LSVLR RL SW T+ +L+ II ++
Sbjct: 723 YFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKIIGNS 782
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S++Y +
Sbjct: 783 VGALGNLTFILAIIVFIFALVGKQLLSENYGCRR 816
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPDP 97
L ++T + V + +FA++G+QLF + ++ K DP
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIKNGTDP 283
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-------TEFVDGLSVLRGLRLSW--------- 45
AL YF GWN+FD IVV S+ L+ E ++LR +RL+
Sbjct: 1529 ALRQYYFTNGWNVFDFIVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIR 1588
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1589 AAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1631
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1213 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1272
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1273 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1308
>gi|345319355|ref|XP_003430134.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like, partial [Ornithorhynchus anatinus]
Length = 1782
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 12/101 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+V SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 727 YFQTSWNIFDSIIVILSLMELGLPKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 786
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT----SEKFAP 95
+GALGNLT VL I+++IFAV+GMQLF + +E FAP
Sbjct: 787 VGALGNLTLVLAIIVFIFAVVGMQLFGNSFNCTKKNETFAP 827
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWTT--------MKVLLSIIISTIGA 61
WNI D ++ ++ + EFVD G+S LR R+ +KV++ +I ++
Sbjct: 207 WNILDFCII---ILAYLAEFVDLKGVSALRTFRVFRALKTVSVIPGLKVIVGALIHSVKK 263
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA++G+QLF
Sbjct: 264 LADVMVLTVFCLSVFALVGLQLF 286
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR----LS-WTTMKVLLS 53
YF W D ++V SL+ L+ + L LR LR LS + M+V++
Sbjct: 1228 YFTNAWCWLDFLIVDVSLISLVANALGHSDLGPIKSLRTLRALRPLRALSRFEGMRVVVD 1287
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1288 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1322
>gi|328927029|ref|NP_001192250.1| sodium channel protein type 10 subunit alpha isoform 1 [Mus
musculus]
gi|148677259|gb|EDL09206.1| mCG126202 [Mus musculus]
Length = 1958
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L T LSVLR RL SW T+ +L+ II ++
Sbjct: 723 YFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKIIGNS 782
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S++Y +
Sbjct: 783 VGALGNLTFILAIIVFIFALVGKQLLSENYGCRR 816
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPDP 97
L ++T + V + +FA++G+QLF + ++ K DP
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIKNGTDP 283
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-------TEFVDGLSVLRGLRLSW--------- 45
AL YF GWN+FD IVV S+ L+ E ++LR +RL+
Sbjct: 1530 ALRQYYFTNGWNVFDFIVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIR 1589
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 AAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1632
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1214 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1273
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1274 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1309
>gi|56748701|sp|Q6QIY3.2|SCNAA_MOUSE RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 3;
Short=PN3; AltName: Full=Sensory neuron sodium channel;
AltName: Full=Sodium channel protein type X subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.8
Length = 1958
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L T LSVLR RL SW T+ +L+ II ++
Sbjct: 723 YFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKIIGNS 782
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL S++Y +
Sbjct: 783 VGALGNLTFILAIIVFIFALVGKQLLSENYGCRR 816
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPDP 97
L ++T + V + +FA++G+QLF + ++ K DP
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIKNGTDP 283
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-------TEFVDGLSVLRGLRLSW--------- 45
AL YF GWN+FD IVV S+ L+ E ++LR +RL+
Sbjct: 1530 ALRQYYFTNGWNVFDFIVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIR 1589
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1590 AAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1632
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT---EFVD-----GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL L+ E+ D L LR LR + M+V++
Sbjct: 1214 YFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVD 1273
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1274 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1309
>gi|365812013|gb|AEX00070.1| voltage-gated sodium channel Nav2.1 [Nematostella vectensis]
Length = 1838
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 13/100 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTE-----FVDGLSVLRGLRL--------SWTTMKVLLS 53
Y + WNIFD +VT S+VDL+ E + GLSVLR RL SW TM +LLS
Sbjct: 675 YIKSRWNIFDGFIVTISIVDLIAEAATHGYDSGLSVLRTFRLLRVFKLAQSWRTMNMLLS 734
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
I ++G LGNLT VL IV+Y+ AV+GMQ+F + YT KF
Sbjct: 735 TIARSVGQLGNLTLVLGIVVYMLAVVGMQIFEQHYTPAKF 774
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 16/94 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFV--DG---LSVLRGLRL-----------SWTTMKV 50
YF+ WN D+++V SL +++ DG LS R LR W MKV
Sbjct: 1089 YFKNLWNCLDVLIVVISLATVISNETTSDGDSNLSAFRSLRTLRALRPLRAISRWEGMKV 1148
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+++ ++ I +GN+ V ++ IF+++G+Q F
Sbjct: 1149 VVNSLLFAIPGIGNVLLVCLVFWLIFSIMGVQFF 1182
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 18/101 (17%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDG--------LSVLRGLRL--------- 43
+AL YF+ WNIFD +V S++ ++ E++ V R R+
Sbjct: 1403 IALRQHYFKQPWNIFDFTIVLLSILGIILEYLQYDLFITPSLFRVARVFRIGRLLRFYKG 1462
Query: 44 SWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ ++L +++IS + AL N+ +L +V++I+++IGM F
Sbjct: 1463 ARGIRRLLFALVIS-LPALFNIGALLFLVMFIYSIIGMSSF 1502
>gi|301605808|ref|XP_002932534.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Xenopus (Silurana) tropicalis]
Length = 1827
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L + LSVLR RL SW T+ L+ II ++
Sbjct: 781 YFQQGWNIFDSIIVCLSLMELCLASMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 840
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT VL I+++IFAV+G+QLF ++Y
Sbjct: 841 VGALGNLTLVLAIIVFIFAVVGVQLFGRNY 870
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLM------TEF--VDGLSVLRGLRL-----SWTTMKVL 51
YF W D +V SL+ L+ +E + L LR LR + M+V+
Sbjct: 1202 KKYFTNAWCWLDFFIVDVSLISLLATPLGLSELGPMKSLRTLRALRPLRALSRFEGMRVV 1261
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ +I I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1262 VNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1298
>gi|152001648|gb|ABB05337.3| voltage-sensitive sodium channel [Sarcoptes scabiei type hominis]
Length = 1198
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 9/108 (8%)
Query: 1 MALSND-YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MALS YF+ GWNIFD ++V SL+D+ V GLSVLR RL SW T+ +L
Sbjct: 56 MALSPKFYFREGWNIFDFVIVVLSLLDVSLSSVSGLSVLRSFRLLRVFKLAKSWPTLNLL 115
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
+SI+ TIG LGNLTFVLVI+I+IFAV+GMQLF K+YT E F +P
Sbjct: 116 ISIMGKTIGDLGNLTFVLVIIIFIFAVMGMQLFGKNYTEESFGGKEIP 163
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VV S L D++ ++ L +++G
Sbjct: 858 ALRWHYFKEPWNVFDFVVVILSILGVLLRDIIAKYFVSPTLLRVVRVVKVGRVLRLVKGA 917
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +VI+I+A+ GM F
Sbjct: 918 R----GIRTLLFALAMSLPALFNICLLLFLVIFIYAIFGMSFF 956
>gi|291233481|ref|XP_002736682.1| PREDICTED: sodium channel, voltage-gated, type I, alpha-like
[Saccoglossus kowalevskii]
Length = 1925
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLL 52
+AL YF+ WN+FD +V S+++L + + G SVLR RL SW+TM++L+
Sbjct: 647 IALDAAYFKSWWNVFDFFIVLVSVIELPLQQIKGFSVLRAFRLLRVFKLAQSWSTMRMLI 706
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF 93
SII +T+ ++G LT +L I+IYIFAVIGMQLF + Y E F
Sbjct: 707 SIIGNTLSSIGYLTVILFIIIYIFAVIGMQLFGEVYIEENF 747
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 22/108 (20%)
Query: 7 YFQCGWNIFDLIVV------------------TASLVDLMTEFVDGLSVLRGLRLSWTTM 48
YF+ WN+FD I+V + +L+ ++ F G VLR ++ +
Sbjct: 1460 YFKRPWNVFDFIIVVLSLLGIILDDLLQSVIISPTLLRVVRVFRIG-RVLRLVKAAKGIR 1518
Query: 49 KVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
K+L +++IS + AL N+ +L +VI+I+A++GM F Y ++ A D
Sbjct: 1519 KLLFALVIS-LPALLNIGALLFLVIFIYAILGMNYFG--YVKQQGALD 1563
>gi|152003762|gb|AAZ91446.3| voltage sensitive sodium channel [Sarcoptes scabiei type suis]
Length = 1157
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 9/108 (8%)
Query: 1 MALSND-YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MALS YF+ GWNIFD ++V SL+D+ V GLSVLR RL SW T+ +L
Sbjct: 45 MALSPKFYFREGWNIFDFVIVVLSLLDVSLSSVSGLSVLRSFRLLRVFKLAKSWPTLNLL 104
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
+SI+ TIG LGNLTFVLVI+I+IFAV+GMQLF K+YT E F +P
Sbjct: 105 ISIMGKTIGDLGNLTFVLVIIIFIFAVMGMQLFGKNYTEESFGGKEIP 152
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VV S L D++ ++ L +++G
Sbjct: 847 ALRWHYFKEPWNVFDFVVVILSILGVLLRDIIAKYFVSPTLLRVVRVVKVGRVLRLVKGA 906
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +VI+I+A+ GM F
Sbjct: 907 R----GIRTLLFALAMSLPALFNICLLLFLVIFIYAIFGMSFF 945
>gi|118766592|gb|ABL11237.1| voltage-sensitive sodium channel [Sarcoptes scabiei type canis]
Length = 1168
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 9/108 (8%)
Query: 1 MALSND-YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MALS YF+ GWNIFD ++V SL+D+ V GLSVLR RL SW T+ +L
Sbjct: 56 MALSPKFYFREGWNIFDFVIVVLSLLDVSLSSVSGLSVLRSFRLLRVFKLAKSWPTLNLL 115
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
+SI+ TIG LGNLTFVLVI+I+IFAV+GMQLF K+YT E F +P
Sbjct: 116 ISIMGKTIGDLGNLTFVLVIIIFIFAVMGMQLFGKNYTEESFGGKEIP 163
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEF---------------VDGLSVLRGL 41
AL YF+ WN+FD +VV S L D++ ++ L +++G
Sbjct: 858 ALRWHYFKEPWNVFDFVVVILSILGVLLRDIIAKYFVSPTLLRVVRVVKVGRVLRLVKGA 917
Query: 42 RLSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
R ++ LL + ++ AL N+ +L +VI+I+A+ GM F
Sbjct: 918 R----GIRTLLFALAMSLPALFNICLLLFLVIFIYAIFGMSFF 956
>gi|152002321|gb|ABB05339.2| voltage-sensitive sodium channel [Sarcoptes scabiei type suis]
Length = 216
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 9/108 (8%)
Query: 1 MALSND-YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVL 51
MALS YF+ GWNIFD ++V SL+D+ V GLSVLR RL SW T+ +L
Sbjct: 45 MALSPKFYFREGWNIFDFVIVVLSLLDVSLSSVSGLSVLRSFRLLRVFKLAKSWPTLNLL 104
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPDPVP 99
+SI+ TIG LGNLTFVLVI+I+IFAV+GMQLF K+YT E F +P
Sbjct: 105 ISIMGKTIGDLGNLTFVLVIIIFIFAVMGMQLFGKNYTEESFGGKEIP 152
>gi|60203065|gb|AAX14719.1| voltage-dependent sodium channel [Mya arenaria]
Length = 1435
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
Y + GWN+FD IVV S ++ + E V GLSVLR RL SW T+ +L+SI+
Sbjct: 509 QYMKDGWNVFDFIVVAFSFLEKLLEDVKGLSVLRTFRLLRVFKLAKSWQTLNMLISIVAR 568
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
T+GALGNL FVL IVI+IFA++G QLF++ Y
Sbjct: 569 TLGALGNLXFVLGIVIFIFAIMGQQLFAQYY 599
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ ++ E + + LR LR W MKV+++
Sbjct: 937 YFTDAWCWLDFVIVAISLIMIVAKVANIGDAESLKAMRTLRALRPLRAVSRWEGMKVVVN 996
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+I I ++ N+ V ++ IF ++G+Q F +
Sbjct: 997 ALIKAIPSIFNVLLVCLVFWLIFGIVGVQFFKGKF 1031
>gi|311698087|gb|ADQ00338.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Rhamphichthys marmoratus]
Length = 912
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD +V+ SLV+L + GLSVLR RL SW T+ +L+ II +
Sbjct: 16 YFQHAWNIFDSFIVSLSLVELGLANMQGLSVLRSFRLLRIFKLAKSWPTLNILIKIICDS 75
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+I+IFA++ MQLF K Y
Sbjct: 76 VGALGNLTIVLAIIIFIFALVCMQLFGKSYKE 107
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWTT--------- 47
AL +F GWN+FD VV S L DL+ ++ ++ R +RL+
Sbjct: 754 ALRQYFFTVGWNVFDFAVVIISIAGLLLSDLIEKYFVSPTMFRVVRLARVARVLRLVKAA 813
Query: 48 --MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 814 KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFG 853
>gi|2791841|gb|AAB96953.1| putative voltage-gated sodium channel [Aiptasia pallida]
Length = 1810
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 13/103 (12%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFV-----DGLSVLRGLRL--------SWTTMKVLLS 53
Y + WNIFD +V S+VDLM E + GLSVLR RL SW TM +LLS
Sbjct: 682 YIKSRWNIFDGFIVVISMVDLMVELLVDDHDSGLSVLRTFRLLRVFKLAQSWQTMNMLLS 741
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFAPD 96
I ++G LGNLT VL IVIY+ AV+G+QLF + YT++ F D
Sbjct: 742 TIARSVGQLGNLTLVLGIVIYMLAVVGVQLFDQYYTTKNFNGD 784
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGL----------------SVLRGLRLSWTTMK 49
YF+ WN+FD ++V S++ ++ E ++ +LR + + +
Sbjct: 1425 HYFREPWNVFDFVIVVLSILGIILEHLEYELFITPSPFVARVFRIGRLLRFYKGAKGIRR 1484
Query: 50 VLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+L ++IIS + AL N+ +L ++++I+A+IGM F
Sbjct: 1485 LLFALIIS-LPALLNIGALLFLIMFIYAIIGMSSF 1518
>gi|354487655|ref|XP_003505987.1| PREDICTED: sodium channel protein type 10 subunit alpha-like
[Cricetulus griseus]
Length = 2013
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 725 YFQKKWNIFDCVIVTVSLLELSISKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 784
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL DY K
Sbjct: 785 VGALGNLTFILAIIVFIFALVGKQLLGDDYGCRK 818
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 244 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 275
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L + F L +LR +R
Sbjct: 1585 ALRQYYFTNGWNVFDFIVVILSIGSLVFSAILKSLESYFSPTLFRVIRLARIGRILRLIR 1644
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1645 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1687
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLRL--------SWTTMKVL 51
YF W D ++V SL L+ + V L LR LR + M+V+
Sbjct: 1267 KKYFTNAWCWLDFLIVNISLTSLIAKILKYSDVASLKALRTLRALRPLRALSRFEGMRVV 1326
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+ ++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1327 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1364
>gi|662385|dbj|BAA04133.1| voltage-gated sodium channel [Halocynthia roretzi]
Length = 2049
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
YFQ WN FD ++V+ SL++ + V GLSVLR RL SW T+ +L+ II +
Sbjct: 857 QYFQDPWNCFDSVIVSFSLLEYALQSVGGLSVLRTFRLMRVFKLAKSWPTLNMLIKIIGN 916
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
++G+LGNLT +L+IV++IFAV+GMQLF + Y + A
Sbjct: 917 SMGSLGNLTLILIIVLFIFAVVGMQLFRERYKEAELA 953
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF+ WN+FD IVV S+V +++ ++ ++ R +RL+ ++
Sbjct: 1652 YFKNPWNVFDFIVVILSVVGSTMNEVIKQYFLQPTLFRIIRLARIGRILRLIRGAKGIRT 1711
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +LV+V++I+++ GM F+
Sbjct: 1712 LLFALMMSLPALFNIALLLVLVMFIYSIFGMSQFA 1746
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 20/98 (20%)
Query: 7 YFQCGWNIFDLIVVTASLVDLM------------TEFVDGLSVLRGLRL--------SWT 46
Y + WNI D+ V+ + +D++ + + G++ LR R+ +
Sbjct: 185 YLRDPWNILDISVIFTAYLDIVMALAQKASDGGKAQKIPGMAALRAFRVLRALKAISAIP 244
Query: 47 TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+K +++ +I ++ AL ++ + + + +FA+IG+QLF
Sbjct: 245 GLKAIVAALIESVKALKDVMILTLFCLSVFALIGLQLF 282
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L+ E + L LR LR + MKV+++
Sbjct: 1322 YFTNAWCWLDFLIVGVSLISLIAEALGMDQIGSIRSLRTLRALRPLRAMSRFRGMKVVVN 1381
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
++ I ++ N+ V +I IF+++G+ F+ +
Sbjct: 1382 ALVGAIPSIFNVLLVCLIFWLIFSIMGVNFFAGKFRK 1418
>gi|365812009|gb|AEX00068.1| voltage-gated sodium channel Nav2.1 [Branchiostoma floridae]
Length = 1582
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 11/95 (11%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLS 53
YFQ WN+FD +V SL++ E V+GLSVLR RL SW TM++LL+
Sbjct: 563 KKYFQDYWNVFDCCIVFISLIEWGLEGVEGLSVLRSFRLARVTRVLKLAKSWPTMQLLLT 622
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
II ++I +G LTF+LV++IYIF+V+GMQ+F +DY
Sbjct: 623 IITNSIQDVGGLTFLLVVIIYIFSVLGMQMFGQDY 657
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 7 YFQCGWNIFDLIVVTASL-VDLMT------------EFVDGLSVLRGLR-----LSWTTM 48
YF GW + D +VV L V L + V L V R LR W M
Sbjct: 912 YFTNGWCVLDCVVVAVGLPVSLFSIALESTTKSANLSAVRSLRVFRALRPLRAISRWQGM 971
Query: 49 KVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
KV++S ++ + A+ N+ V V+ IF ++G+QLFS +
Sbjct: 972 KVVVSALLHAVPAIFNVLLVCVVFWLIFGIMGVQLFSGQF 1011
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 20/104 (19%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE------------------FVDGLSVLRGLR 42
+ + N YF+ WN+FD +V S++ + E F G VLR +R
Sbjct: 1228 IGMGNQYFRLPWNVFDFCIVVLSILGFLLEDVLKSRFLTPTLLRVVRIFRIG-RVLRLIR 1286
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++L +++IS + AL N+ +L+IV++IF+++GM F+
Sbjct: 1287 AAKGISRLLFALLIS-LPALFNICILLLIVMFIFSIMGMVSFTH 1329
>gi|260788105|ref|XP_002589091.1| hypothetical protein BRAFLDRAFT_75071 [Branchiostoma floridae]
gi|229274265|gb|EEN45102.1| hypothetical protein BRAFLDRAFT_75071 [Branchiostoma floridae]
Length = 1709
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 11/95 (11%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL-----------SWTTMKVLLS 53
YFQ WN+FD +V SL++ E V+GLSVLR RL SW TM++LL+
Sbjct: 712 KKYFQDYWNVFDCCIVFISLIEWGLEGVEGLSVLRSFRLARVTRVLKLAKSWPTMQLLLT 771
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
II ++I +G LTF+LV++IYIF+V+GMQ+F +DY
Sbjct: 772 IITNSIQDVGGLTFLLVVIIYIFSVLGMQMFGQDY 806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTE---------FVDGLSVLRGLR-----LSWTTMKVLL 52
YF GW + D +VV SL + E V L V R LR W MKV++
Sbjct: 1061 YFTNGWCVLDCVVVAVSLFSIALESTTKSANLSAVRSLRVFRALRPLRAISRWQGMKVVV 1120
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
S ++ + A+ N+ V V+ IF ++G+QLFS +
Sbjct: 1121 SALLHAVPAIFNVLLVCVVFWLIFGIMGVQLFSGQF 1156
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 20/104 (19%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLVDLMTE------------------FVDGLSVLRGLR 42
+ + N YF+ WN+FD +V S++ + E F G VLR +R
Sbjct: 1355 IGMGNQYFRLPWNVFDFCIVVLSILGFLLEDVLKSRFLTPTLLRVVRIFRIG-RVLRLIR 1413
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++L +++IS + AL N+ +L+IV++IF+++GM F+
Sbjct: 1414 AAKGISRLLFALLIS-LPALFNICILLLIVMFIFSIMGMVSFTH 1456
>gi|344244729|gb|EGW00833.1| Sodium channel protein type 10 subunit alpha [Cricetulus griseus]
Length = 1866
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 699 YFQKKWNIFDCVIVTVSLLELSISKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 758
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLTF+L I+++IFA++G QL DY K
Sbjct: 759 VGALGNLTFILAIIVFIFALVGKQLLGDDYGCRK 792
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 196 YLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 255
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPDPV 98
L ++T + V + +FA++G+QLF + ++ + DP+
Sbjct: 256 RKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIRNGTDPL 296
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L + F L +LR +R
Sbjct: 1438 ALRQYYFTNGWNVFDFIVVILSIGSLVFSAILKSLESYFSPTLFRVIRLARIGRILRLIR 1497
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1498 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFAN 1540
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF-----VDGLSVLRGLRL--------SWTTMKVL 51
YF W D ++V SL L+ + V L LR LR + M+V+
Sbjct: 1120 KKYFTNAWCWLDFLIVNISLTSLIAKILKYSDVASLKALRTLRALRPLRALSRFEGMRVV 1179
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT 89
+ ++ I ++ N+ V +I IF+++G+ LF+ ++
Sbjct: 1180 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1217
>gi|119584949|gb|EAW64545.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_b [Homo
sapiens]
Length = 1043
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSIII 56
YF+ GWNIFD IV S D+M F+ VLR +L SW T+ L+ II
Sbjct: 636 YFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIG 695
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+++GALG+LT VLVIVI+IF+V+GMQLF + + S+K
Sbjct: 696 NSVGALGSLTVVLVIVIFIFSVVGMQLFGRSFNSQK 731
>gi|342837669|tpg|DAA34924.1| TPA_inf: voltage-dependent sodium channel SCN10A [Ornithorhynchus
anatinus]
Length = 1551
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 12/101 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+V SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 710 YFQTSWNIFDSIIVILSLMELGLPKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 769
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYT----SEKFAP 95
+GALGNLT VL I+++IFAV+GMQLF + +E FAP
Sbjct: 770 VGALGNLTLVLAIIVFIFAVVGMQLFGNSFNCTKKNETFAP 810
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WNI D ++ ++ + EFVD G+S LR R+ +KV++ +I ++
Sbjct: 191 WNILDFCII---ILAYLAEFVDLKGVSALRTFRVFRALKTVSVIPGLKVIVGALIHSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKD 87
L ++ + V + +FA++G+QLF +
Sbjct: 248 LADVMVLTVFCLSVFALVGLQLFKGN 273
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L+ + L LR LR + M+V+
Sbjct: 1209 QKYFTNAWCWLDFLIVDVSLISLVANALGHSDLGPIKSLRTLRALRPLRALSRFEGMRVV 1268
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1269 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1305
>gi|6693705|gb|AAF24980.1|AF150882_1 voltage-gated sodium channel alpha subunit, alternate splice
variant SCN12A-s [Homo sapiens]
Length = 1444
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSIII 56
YF+ GWNIFD IV S D+M F+ VLR +L SW T+ L+ II
Sbjct: 636 YFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIG 695
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+++GALGNLT VLVIVI+IF+V+GMQLF + + S+K
Sbjct: 696 NSVGALGNLTVVLVIVIFIFSVVGMQLFGRSFNSQK 731
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTAS---LVDLMT-EFVDGLSVLRGLRL--SWTTMKVLLSIIISTIG 60
YF W D I+V S L++LM + L LR LR + MKV+++ +I I
Sbjct: 1117 YFTSAWCCLDFIIVIVSVTTLINLMELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIP 1176
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I +F ++G+ FS +
Sbjct: 1177 AILNVLLVCLIFWLVFCILGVYFFSGKF 1204
>gi|14165230|gb|AAK55440.1| Nav1.1La [Sternopygus macrurus]
Length = 744
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 14/104 (13%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIS 57
+YFQ WNIFD I+V SL++L + G+SVLR RL SW T+ +L+ II +
Sbjct: 37 NYFQVRWNIFDSIIVGLSLMELGLANLSGMSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN 96
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYT------SEKFAP 95
++GAL NLT VL I+++IFAV+GMQLF K Y S+K P
Sbjct: 97 SLGALSNLTLVLAIIVFIFAVVGMQLFGKSYKIYRCKISDKCQP 140
>gi|403278952|ref|XP_003931043.1| PREDICTED: sodium channel protein type 10 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1966
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 733 YFQKKWNIFDCVIVTVSLLELGVARKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 792
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I++++FA++G QL ++Y +E+
Sbjct: 793 VGALGNLTIILAIIVFVFALVGKQLLGENYRNER 826
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 187 YLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 246
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKD 87
L ++T + + + +FA++G+QLF +
Sbjct: 247 KKLADVTILTIFCLSVFALVGLQLFKGN 274
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-TEFVDGL------SVLRGLRLSW--------- 45
AL YF GWN+FD IVV S+ L+ + + L ++ R +RL+
Sbjct: 1538 ALRQYYFTNGWNVFDFIVVVLSIASLVFSAILKSLQSYLSPTLFRVIRLARIGRILRLIR 1597
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1598 AAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSF 1638
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL L + ++ L LR LR + M+V+
Sbjct: 1220 KKYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALRPLRALSRFEGMRVV 1279
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1280 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1316
>gi|390476506|ref|XP_002759796.2| PREDICTED: sodium channel protein type 10 subunit alpha [Callithrix
jacchus]
Length = 1921
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 729 YFQKKWNIFDCIIVTVSLLELGVARKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 788
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I++++FA++G QL ++Y S++
Sbjct: 789 VGALGNLTIILAIIVFVFALVGKQLLGENYRSKR 822
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 187 YLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 246
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + + + +FA++G+QLF + ++
Sbjct: 247 KKLADVTILTIFCLSVFALVGLQLFKGNLKNK 278
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L + F L +LR +R
Sbjct: 1493 ALRQYYFTNGWNVFDFIVVVLSIASLIFSAILKSLQSYFSPTLFRVIRLARIGRILRLIR 1552
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1553 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMTSF 1593
>gi|30350266|gb|AAP20108.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus
capitis]
Length = 2051
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T
Sbjct: 850 YFQEGWNIFDFIIVALSLLELGLENVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRT 909
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS--EKFAPDPVP 99
+GALGNL FV I+I+IFAV+GMQLF K+YT ++F +P
Sbjct: 910 VGALGNLIFVFCIIIFIFAVMGMQLFGKNYTDNVDRFMDKELP 952
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSW----------- 45
AL YF WN+FD +VV S L D++ ++ ++LR +R++
Sbjct: 1647 ALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA 1706
Query: 46 TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL + ++ AL N+ +L +V++IFA+ GM F
Sbjct: 1707 KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF 1745
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVDG-----------LSVLRGLRL--SWTTMKVL 51
+YF W D ++V SL++ + L LR LR M+V+
Sbjct: 1335 KEYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVV 1394
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ ++ I ++ N+ V +I IFA++G+QLF+ Y
Sbjct: 1395 VNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1431
>gi|395843494|ref|XP_003794516.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 1
[Otolemur garnettii]
Length = 1958
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 729 YFQKKWNIFDCIIVTVSLLELGMAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 788
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF---APD 96
+GALGNLT +L I++++FA++GMQL ++Y + + APD
Sbjct: 789 VGALGNLTIILGIIVFVFALVGMQLLGENYNTNRRAISAPD 829
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 7 YFQCGWNIFDLIVVT----ASLVDLMTEFVDGLSVLRGLRLSWTT-----MKVLLSIIIS 57
Y + WN D V+T S +DL + GL R LR T +KV++ +I
Sbjct: 187 YLRDPWNWLDFSVITLAYVGSAIDLRG--ISGLRTFRVLRALKTVSVIPGLKVIVGALIH 244
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
++ L ++T + + + +FA++G+QLF + ++
Sbjct: 245 SVRKLADVTILTIFCLSVFALVGLQLFKGNLKNK 278
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL + YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1530 ALRHYYFTNGWNVFDFIVVVLSIASLVFSAILKSLENYFSPTLFRVFRLARIGRILRLIR 1589
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1590 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSF 1630
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + ++ L LR LR + M+V++
Sbjct: 1214 YFTNAWCWLDFLIVNISLISLTAKILEYSEIAPIKALRTLRALRPLRALSRFEGMRVVVD 1273
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1274 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1308
>gi|431910582|gb|ELK13650.1| Sodium channel protein type 10 subunit alpha [Pteropus alecto]
Length = 1998
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L G++VLR RL SW T+ L+ II ++
Sbjct: 764 YFQKRWNIFDCIIVTVSLIELGAAKKGGMAVLRSFRLLRVLKLAKSWPTLNTLIKIIGNS 823
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I+++IFA++G QL ++Y +
Sbjct: 824 VGALGNLTIILAIIVFIFALVGKQLLGENYRDNR 857
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 153 YLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 212
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 213 RKLADVTILTVFCLSVFALVGLQLFKGNLKNK 244
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVL 51
+YF W D ++V SL L+ + + L LR LR + M+V+
Sbjct: 1251 KNYFTNAWCWLDFLIVNISLTSLVAKILQYSDMSSIKALRTLRALRPLRALSRFEGMRVV 1310
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IF+++GM FS +
Sbjct: 1311 VDALVGAIPSIMNVLLVCLIFWLIFSIMGMNFFSGKF 1347
>gi|395843496|ref|XP_003794517.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 2
[Otolemur garnettii]
Length = 1967
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 739 YFQKKWNIFDCIIVTVSLLELGMAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 798
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKF---APD 96
+GALGNLT +L I++++FA++GMQL ++Y + + APD
Sbjct: 799 VGALGNLTIILGIIVFVFALVGMQLLGENYNTNRRAISAPD 839
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 7 YFQCGWNIFDLIVVT----ASLVDLMTEFVDGLSVLRGLRLSWTT-----MKVLLSIIIS 57
Y + WN D V+T S +DL + GL R LR T +KV++ +I
Sbjct: 187 YLRDPWNWLDFSVITLAYVGSAIDLRG--ISGLRTFRVLRALKTVSVIPGLKVIVGALIH 244
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
++ L ++T + + + +FA++G+QLF + ++
Sbjct: 245 SVRKLADVTILTIFCLSVFALVGLQLFKGNLKNK 278
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL + YF GWN+FD IVV +A L L F L +LR +R
Sbjct: 1539 ALRHYYFTNGWNVFDFIVVVLSIASLVFSAILKSLENYFSPTLFRVFRLARIGRILRLIR 1598
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1599 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSF 1639
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SL+ L + ++ L LR LR + M+V++
Sbjct: 1223 YFTNAWCWLDFLIVNISLISLTAKILEYSEIAPIKALRTLRALRPLRALSRFEGMRVVVD 1282
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1283 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1317
>gi|257357861|dbj|BAI23237.1| sodium channel [Thrips tabaci]
gi|268327039|dbj|BAI49490.1| sodium channel [Thrips tabaci]
gi|268327041|dbj|BAI49491.1| sodium channel [Thrips tabaci]
Length = 160
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GALG
Sbjct: 1 WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLTFVLCIIIFIFAVMGMQLFGKNYFDNVDKFPGGEMP 98
>gi|365812019|gb|AEX00073.1| voltage-gated sodium channel Nav2.4 [Nematostella vectensis]
Length = 1757
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 14/102 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVD-LMTEFVD-----GLSVLRGLRL--------SWTTMKVLL 52
Y + WNIFD IVV S+VD ++ +FV G+SVLR RL SW+TM LL
Sbjct: 575 YIRVAWNIFDGIVVIISIVDFIVNKFVPDAGGTGISVLRTFRLLRVLKLAKSWSTMNSLL 634
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+ I ++GALGNLT +L I++YIFAV+GMQL YT +KF
Sbjct: 635 ATIGKSLGALGNLTVILAIIVYIFAVMGMQLLGNSYTPDKFG 676
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTE----FVDGLSVLRGLRL-----SWTTMKVLLSIIIS 57
YF WNI D ++V SL + F+ L LR R + MKV+++ ++
Sbjct: 933 YFTNPWNILDFVIVIVSLATIFGNDQIAFIRSLRTLRAFRPLRAISRFEGMKVVITSLLH 992
Query: 58 TIGALGNLTFVLVIVIYIFAVIGMQLFSK------DYTSEKFAPDPVP 99
I +GN+ V ++ IF+++G+Q+F D EK++ VP
Sbjct: 993 AIPGIGNVLLVCLMFWLIFSIMGVQIFGGKFGKCVDEGGEKYSASVVP 1040
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLS------------VLRGLRL 43
+AL YF WN+FD ++V +S++ +L T V S +LR
Sbjct: 1240 IALRKGYFLNPWNVFDFVIVISSIIGIIVENLQTSLVINPSLLRVVRVFRVGRLLRFFEA 1299
Query: 44 SWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+ ++L S++IST AL N+ +L ++I+I+A+IGM +F +E
Sbjct: 1300 ARGIRRLLFSLVIST-PALFNIGALLFLIIFIYAIIGMSIFGHVKKTE 1346
>gi|37653219|emb|CAC79237.1| para-like voltage dependent sodium channel [Frankliniella
occidentalis]
gi|37653221|emb|CAC79238.1| para-like voltage dependent sodium channel [Frankliniella
occidentalis]
gi|37653225|emb|CAC79240.1| para-like voltage dependent sodium channel [Frankliniella
occidentalis]
Length = 162
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GALG
Sbjct: 1 WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLTFVLCIIIFIFAVMGMQLFGKNYYDNVDKFPGGEMP 98
>gi|441610789|ref|XP_003256917.2| PREDICTED: sodium channel protein type 10 subunit alpha [Nomascus
leucogenys]
Length = 1959
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 727 YFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 786
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I++++FA++G QL ++Y S +
Sbjct: 787 VGALGNLTIILAIIVFVFALVGKQLLGENYRSNR 820
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 187 YLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 246
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + + + +FA++G+QLF + ++
Sbjct: 247 KKLADVTILTIFCLSVFALVGLQLFKGNLKNK 278
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 2 ALSNDYFQCGWNIFDLIVV---------TASLVDLMTEFVDGL----------SVLRGLR 42
AL YF GWN+FD IVV +A L L + F L +LR +R
Sbjct: 1532 ALRQYYFTNGWNVFDFIVVVLSIASLVFSAILKSLQSYFSPTLFRVIRLARIGRILRLIR 1591
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1592 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSF 1632
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL+ L + ++ L LR LR + M+V+
Sbjct: 1214 KKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRPLRALSRFEGMRVV 1273
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1274 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1310
>gi|6693697|gb|AAF24976.1|AF109737_1 voltage-gated sodium channel alpha subunit SCN12A [Homo sapiens]
Length = 1791
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 10/97 (10%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSII 55
YF+ GWNIFD IV S D+M F+ VLR +L SW T+ L+ II
Sbjct: 635 HYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKII 694
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+++GALGNLT VLVIVI+IF+V+GMQLF + + S+K
Sbjct: 695 GNSVGALGNLTVVLVIVIFIFSVVGMQLFGRSFNSQK 731
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGLSVL----------------RGLRL-- 43
AL YF GWN+FD +VV S+V M ++ + R LRL
Sbjct: 1419 ALRQYYFTNGWNLFDCVVVLLSIVSTMISTLENQEHIPFPPTLFRIVRLARIGRILRLVR 1478
Query: 44 SWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
+ ++ LL ++ ++ +L N+ +L ++++I+A++GM FSK
Sbjct: 1479 AARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGMNWFSK 1521
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTAS---LVDLMT-EFVDGLSVLRGLRL--SWTTMKVLLSIIISTIG 60
YF W D I+V S L++LM + L LR LR + MKV+++ +I I
Sbjct: 1117 YFTSAWCCLDFIIVIVSVTTLINLMELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIP 1176
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I +F ++G+ FS +
Sbjct: 1177 AILNVLLVCLIFWLVFCILGVYFFSGKF 1204
>gi|350591072|ref|XP_003358419.2| PREDICTED: sodium channel protein type 10 subunit alpha-like
isoform 2, partial [Sus scrofa]
Length = 1177
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L L+VLR RL SW T+ +L+ II ++
Sbjct: 734 YFQNRWNIFDCIIVTVSLIELGMARKGSLTVLRTFRLLRVFKLAKSWPTLNMLIKIIGNS 793
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I++++FA++G QL + Y + +
Sbjct: 794 VGALGNLTIILAIIVFVFALVGKQLLGESYNTNR 827
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I ++
Sbjct: 187 YLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 246
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLF 84
L ++T + + + +FA++G+QLF
Sbjct: 247 RKLADVTILTIFCLSVFALVGLQLF 271
>gi|311698091|gb|ADQ00340.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a
[Steatogenys elegans]
Length = 934
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD +V+ SL+++ + GLSVLR RL SW T+ +L+ II +
Sbjct: 37 YFQQSWNIFDSFIVSLSLLEMGLANMQGLSVLRSFRLLRIFKLAKSWPTLNILIKIICDS 96
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+I+IFA++ MQLF K Y
Sbjct: 97 VGALGNLTIVLAIIIFIFALVCMQLFGKSYKE 128
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTAS-----LVDLMTEFVDGLSVLRGLRLSWTT-------- 47
+AL + +F GWN+FD VV S L DL+ ++ ++ R +RL+
Sbjct: 774 LALRHYFFTVGWNVFDFAVVIISIAGLLLSDLIEKYFVSPTMFRVVRLARVARVLRLVKA 833
Query: 48 ---MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L ++++IF++ GM F
Sbjct: 834 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF 873
>gi|297671690|ref|XP_002813973.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 11
subunit alpha [Pongo abelii]
Length = 1628
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 10/98 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSIII 56
YF+ GWNIFD IV S D+M+ F+ VLR +L SW T+ L+ II
Sbjct: 646 YFRRGWNIFDSIVALLSFADVMSCIFQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIG 705
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+++GALG+LT VLVIVI+IF+V+GMQLF + S+K A
Sbjct: 706 NSVGALGSLTVVLVIVIFIFSVVGMQLFGHSFNSQKSA 743
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-EFVDGLSVLRGLR-----LSWTTMKVLLSIIISTIG 60
YF W D I+V S+ L+ + + LR LR + MKV+++ +I I
Sbjct: 1127 YFTSAWCCLDFIIVIVSVTTLINLKELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIP 1186
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I IF ++G+ FS +
Sbjct: 1187 AILNVLLVCLIFWLIFCILGVHFFSGKF 1214
>gi|119584948|gb|EAW64544.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_a [Homo
sapiens]
Length = 1776
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSIII 56
YF+ GWNIFD IV S D+M F+ VLR +L SW T+ L+ II
Sbjct: 642 YFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIG 701
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+++GALG+LT VLVIVI+IF+V+GMQLF + + S+K
Sbjct: 702 NSVGALGSLTVVLVIVIFIFSVVGMQLFGRSFNSQK 737
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGL-------SVLRGLRLSWT-------- 46
AL YF GWN+FD +VV S+V M ++ ++ R +RL+
Sbjct: 1425 ALRQYYFTNGWNLFDCVVVLLSIVSTMISTLENQEHIPFPPTLFRIVRLARIGRILRLVR 1484
Query: 47 ---TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ +L N+ +L ++++I+A++GM FSK
Sbjct: 1485 AARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGMNWFSK 1527
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTAS---LVDLMT-EFVDGLSVLRGLRL--SWTTMKVLLSIIISTIG 60
YF W D I+V S L++LM + L LR LR + MKV+++ +I I
Sbjct: 1123 YFTSAWCCLDFIIVIVSVTTLINLMELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIP 1182
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I +F ++G+ FS +
Sbjct: 1183 AILNVLLVCLIFWLVFCILGVYFFSGKF 1210
>gi|156368561|ref|XP_001627761.1| predicted protein [Nematostella vectensis]
gi|156214681|gb|EDO35661.1| predicted protein [Nematostella vectensis]
Length = 1534
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 14/102 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVD-LMTEFVD-----GLSVLRGLRL--------SWTTMKVLL 52
Y + WNIFD IVV S+VD ++ +FV G+SVLR RL SW+TM LL
Sbjct: 562 YIRVAWNIFDGIVVIISIVDFIVNKFVPDAGGTGISVLRTFRLLRVLKLAKSWSTMNSLL 621
Query: 53 SIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEKFA 94
+ I ++GALGNLT +L I++YIFAV+GMQL YT +KF
Sbjct: 622 ATIGKSLGALGNLTVILAIIVYIFAVMGMQLLGNSYTPDKFG 663
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTAS-LVDLMT-------EFVDGLSVLRGLRL-----SWTTMKVLLS 53
YF WNI D ++V S +V L T F+ L LR R + MKV+++
Sbjct: 888 YFTNPWNILDFVIVIVSIMVSLATIFGNDQIAFIRSLRTLRAFRPLRAISRFEGMKVVIT 947
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I +GN+ V ++ IF+++G+Q+F +
Sbjct: 948 SLLHAIPGIGNVLLVCLMFWLIFSIMGVQIFGGKF 982
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLS------------VLRGLRL 43
+AL YF WN+FD ++V +S++ +L T V S +LR
Sbjct: 1197 IALRKGYFLNPWNVFDFVIVISSIIGIIVENLQTSLVINPSLLRVVRVFRVGRLLRFFEA 1256
Query: 44 SWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
+ ++L S++IST AL N+ +L ++I+I+A+IGM +F +E
Sbjct: 1257 ARGIRRLLFSLVIST-PALFNIGALLFLIIFIYAIIGMSIFGHVKKTE 1303
>gi|268327045|dbj|BAI49493.1| sodium channel [Thrips tabaci]
Length = 160
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI T+GALG
Sbjct: 1 WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIXGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLTFVLCIIIFIFAVMGMQLFGKNYFDNVDKFPGGEMP 98
>gi|334343636|ref|XP_001373143.2| PREDICTED: sodium channel protein type 10 subunit alpha-like
[Monodelphis domestica]
Length = 2149
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SLV+L LSVLR RL SW T+ L+ II ++
Sbjct: 624 YFQKSWNIFDSVIVTLSLVELGLPQKASLSVLRSFRLLRVFKLAKSWPTLNNLIKIIGNS 683
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT +L I+++IFAV+G QLF +Y
Sbjct: 684 VGALGNLTLILAIIVFIFAVVGKQLFGDNY 713
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDL-----MTEFVDGLS--------------VLRGLR 42
AL YF GWNIFD IVV S+V L M + S +LR +R
Sbjct: 1429 ALRYYYFINGWNIFDFIVVILSIVSLVFSGIMKSLENYFSPTLFRVIRLARIGRILRLIR 1488
Query: 43 LSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+ ++ LL ++ ++ AL N+ +L +V++I+++ GM F+ Y E+
Sbjct: 1489 AA-KGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA--YVKEE 1535
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + L LR LR + M+V++
Sbjct: 1114 YFTNAWCWLDFLIVDVSMISLIANTLGYSEIGPIKSLRTLRALRPLRALSRFEGMRVVVD 1173
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY------TSEKFAP 95
++ I ++ N+ V +I IF+++G+ LFS + T E F P
Sbjct: 1174 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKFGRCINITLENFPP 1221
>gi|349119|gb|AAA16202.1| sodium channel [Doryteuthis opalescens]
Length = 1784
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF+ WN+FD +V SL++L + GLSVLR RL SW T+ +L+SI+ T
Sbjct: 651 YFKDPWNVFDSFIVFLSLMELGLGGIQGLSVLRSFRLLRVFKLAKSWPTLNMLISIVAGT 710
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS-EKFAPDPVP 99
+GALGNLT VL I+++IFAV+G QLF +Y E F + VP
Sbjct: 711 MGALGNLTLVLGIIVFIFAVMGQQLFGANYEKPECFEDNQVP 752
>gi|257357859|dbj|BAI23238.1| sodium channel [Thrips tabaci]
Length = 160
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI T+GALG
Sbjct: 1 WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIXGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NLTFVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLTFVLCIIIFIFAVMGMQLFGKNYFDNVDKFPGGEMP 98
>gi|395843498|ref|XP_003794518.1| PREDICTED: sodium channel protein type 11 subunit alpha [Otolemur
garnettii]
Length = 1770
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 10/97 (10%)
Query: 6 DYFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSII 55
YF+ GWNIFD IV S D+MT +F+ VLR +L SW T+ L+ II
Sbjct: 635 HYFRRGWNIFDSIVAVLSFADVMTNKSSKPRWQFLRSFRVLRIFKLAKSWPTLNTLIKII 694
Query: 56 ISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
++GALGNLT VL IVI+IF+V+GMQLF + S K
Sbjct: 695 AHSVGALGNLTVVLAIVIFIFSVVGMQLFGSTFKSAK 731
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 17/102 (16%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVD-LMTEFVDGL-----SVLRGLRLSW---------- 45
AL YF GWN+FD +VV S+V +++E L ++ R +RL+
Sbjct: 1406 ALRQYYFINGWNLFDCVVVVLSIVSTIVSELEQKLINFPPTLFRIVRLARIGRILRLVRA 1465
Query: 46 -TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ +L N+ +L +V++I+A++GM FSK
Sbjct: 1466 ARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAILGMNYFSK 1507
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YF W D I+V S+ L+ + GL R LR + MKV+++ +I
Sbjct: 1105 YFTSAWCWLDFIIVIVSVPSLID--LKGLRSFRTLRALRPLRALSQFEGMKVVVNALIGA 1162
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
I A+ N+ V +I IF ++G+ FS +
Sbjct: 1163 IPAILNVLLVCLIFWLIFCILGVNFFSGKF 1192
>gi|116451|sp|P02719.1|SCNA_ELEEL RecName: Full=Sodium channel protein; AltName: Full=Na(+) channel
gi|62777|emb|CAA25587.1| unnamed protein product [Electrophorus electricus]
gi|1041049|gb|AAA79960.1| Na+ channel [Electrophorus electricus]
gi|224225|prf||1012288A protein,Na channel
Length = 1820
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+V+ SL++L + G+SVLR LRL SW T+ +L+ II ++
Sbjct: 625 YFQQTWNIFDSIIVSLSLLELGLSNMQGMSVLRSLRLLRIFKLAKSWPTLNILIKIICNS 684
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GALGNLT VL I+++IFA++G QLF K+Y
Sbjct: 685 VGALGNLTIVLAIIVFIFALVGFQLFGKNYKE 716
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 1 MALSNDYFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSWTT-------- 47
+AL +F GWN+FD VV S++ D++ ++ ++ R +RL+
Sbjct: 1374 LALRQYFFTVGWNVFDFAVVVISIIGLLLSDIIEKYFVSPTLFRVIRLARIARVLRLIRA 1433
Query: 48 ---MKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L ++++IF++ GM F+
Sbjct: 1434 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFA 1474
>gi|395517040|ref|XP_003762690.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Sarcophilus harrisii]
Length = 1973
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD ++VT SLV+L LSVLR RL SW T+ L+ II ++
Sbjct: 792 YFQRSWNIFDSVIVTLSLVELGLPQKASLSVLRSFRLLRVFKLAKSWPTLNNLIKIIGNS 851
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+GALGNLT +L I+++IFAV+G QLF +Y
Sbjct: 852 VGALGNLTLILAIIVFIFAVVGKQLFGDNY 881
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V S++ L+ + L LR LR + M+V++
Sbjct: 1235 YFTNAWCWLDFLIVDVSMISLIATTLGYSDIGPIKSLRTLRALRPLRALSRFEGMRVVVD 1294
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LFS +
Sbjct: 1295 ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKF 1329
>gi|37653211|emb|CAC79233.1| para-like voltage dependent sodium channel [Frankliniella
occidentalis]
Length = 118
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 12 WNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIISTIGALG 63
WNIFD I+V SL++L E V GLSVLR RL SW T+ +L+SI+ T+GALG
Sbjct: 1 WNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALG 60
Query: 64 NLTFVLVIVIYIFAVIGMQLFSKDY--TSEKFAPDPVP 99
NL FVL I+I+IFAV+GMQLF K+Y +KF +P
Sbjct: 61 NLCFVLCIIIFIFAVMGMQLFGKNYYDNVDKFPGGEMP 98
>gi|334330180|ref|XP_003341312.1| PREDICTED: sodium channel protein type 2 subunit alpha [Monodelphis
domestica]
Length = 1957
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GAL VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALRKPDLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|334330182|ref|XP_003341313.1| PREDICTED: sodium channel protein type 2 subunit alpha [Monodelphis
domestica]
Length = 1957
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 770 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 829
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GAL VL I+++IFAV+GMQLF K Y
Sbjct: 830 VGALRKPDLVLAIIVFIFAVVGMQLFGKSYKE 861
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1541 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1600
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1601 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1635
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLF 84
L ++ + V + +FA+IG+QLF
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLF 270
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLR-----LSWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1221 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1280
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1281 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1315
>gi|297488437|ref|XP_002696962.1| PREDICTED: sodium channel protein type 10 subunit alpha [Bos
taurus]
gi|296475121|tpg|DAA17236.1| TPA: tetrodotoxin-resistant voltage-gated sodium channel-like [Bos
taurus]
Length = 1973
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L L+VLR RL SW T+ L+ II ++
Sbjct: 726 YFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKSWPTLNTLIKIIGNS 785
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I+++IFA++G QL ++Y ++
Sbjct: 786 VGALGNLTIILAIIVFIFALVGKQLLGENYCQKR 819
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + +T+ + GL R LR T +KV++ +I ++
Sbjct: 187 YLRDPWNWLDFSVITLAYAGEVTDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSV 246
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + V + +FA++G+QLF + ++
Sbjct: 247 KKLADVTILTVFCLSVFALVGLQLFKGNLKNK 278
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 18/102 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-TEFVDGLSVL------RGLRLSW--------- 45
AL + YF GWN+FD +VV S+ L+ + V L L R +RL+
Sbjct: 1531 ALRHYYFTNGWNVFDFVVVVLSIGSLVFSAIVSSLGSLFSPTLFRVIRLARVGRILRLIR 1590
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
++ LL ++ ++ AL N+ +L +V++I+++ GM F+
Sbjct: 1591 GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA 1632
>gi|126326265|ref|XP_001367245.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2007
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GAL VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALRKPDLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1591 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1650
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1651 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1685
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFVD +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1271 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1330
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1331 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1365
>gi|126326263|ref|XP_001367197.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Monodelphis domestica]
Length = 2007
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ GWNIFD +V+ SL++L V+GLSVLR RL SW T+ +L+ II ++
Sbjct: 820 YFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS 879
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTS 90
+GAL VL I+++IFAV+GMQLF K Y
Sbjct: 880 VGALRKPDLVLAIIVFIFAVVGMQLFGKSYKE 911
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 7 YFQCGWNIFDLIVVTASLV-----DLMTEFVDGLSVLRGLRLSW-----------TTMKV 50
YF GWNIFD +VV S+V +L+ ++ ++ R +RL+ ++
Sbjct: 1591 YFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT 1650
Query: 51 LLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFS 85
LL ++ ++ AL N+ +L +V++I+A+ GM F+
Sbjct: 1651 LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFA 1685
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 12 WNIFDLIVVTASLVDLMTEFVD--GLSVLRGLRLSWT--------TMKVLLSIIISTIGA 61
WN D V+T + V TEFV+ +S LR R+ +K ++ +I ++
Sbjct: 191 WNWLDFTVITFAYV---TEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 247
Query: 62 LGNLTFVLVIVIYIFAVIGMQLFSKDYTSE--KFAPD 96
L ++ + V + +FA+IG+QLF + ++ ++ PD
Sbjct: 248 LSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPD 284
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--------VDGLSVLRGLRL-----SWTTMKVLLS 53
YF W D ++V SLV L + L LR LR + M+V+++
Sbjct: 1271 YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN 1330
Query: 54 IIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1331 ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1365
>gi|119584950|gb|EAW64546.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_c [Homo
sapiens]
Length = 1591
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT--------EFVDGLSVLRGLRL--SWTTMKVLLSIII 56
YF+ GWNIFD IV S D+M F+ VLR +L SW T+ L+ II
Sbjct: 636 YFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIG 695
Query: 57 STIGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+++GALG+LT VLVIVI+IF+V+GMQLF + + S+K
Sbjct: 696 NSVGALGSLTVVLVIVIFIFSVVGMQLFGRSFNSQK 731
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGL-------SVLRGLRLSWT-------- 46
AL YF GWN+FD +VV S+V M ++ ++ R +RL+
Sbjct: 1419 ALRQYYFTNGWNLFDCVVVLLSIVSTMISTLENQEHIPFPPTLFRIVRLARIGRILRLVR 1478
Query: 47 ---TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ +L N+ +L ++++I+A++GM FSK
Sbjct: 1479 AARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGMNWFSK 1521
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTAS---LVDLMT-EFVDGLSVLRGLRL--SWTTMKVLLSIIISTIG 60
YF W D I+V S L++LM + L LR LR + MKV+++ +I I
Sbjct: 1117 YFTSAWCCLDFIIVIVSVTTLINLMELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIP 1176
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I +F ++G+ FS +
Sbjct: 1177 AILNVLLVCLIFWLVFCILGVYFFSGKF 1204
>gi|431910583|gb|ELK13651.1| Sodium channel protein type 11 subunit alpha [Pteropus alecto]
Length = 1668
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 7/93 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVD-----GLSVLRGLRL--SWTTMKVLLSIIISTI 59
YF+ GWN+FD IV S+ D+M ++ L VLR +L SW T+ L+ II ++
Sbjct: 596 YFRRGWNVFDSIVALLSVTDVMMNKINVPLFHSLRVLRVFKLAKSWPTLNTLIKIIGHSV 655
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
GALGNLT VL IV++IF+V+GMQ+F + SEK
Sbjct: 656 GALGNLTVVLAIVVFIFSVVGMQMFGSKFNSEK 688
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMT-EFVDGLSVLRGLR-----LSWTTMKVLLSIIISTIG 60
YF W D I+V S+++L + + L LR LR + MKV+++ +I I
Sbjct: 1035 YFTSAWCWLDFIIVIVSVLNLTNLKVLKSLRTLRALRPLRALSQFEGMKVVVNALIGAIP 1094
Query: 61 ALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
A+ N+ V +I IF ++G+ LFS +
Sbjct: 1095 AILNVLLVCLIFWLIFCILGVNLFSGKF 1122
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLMTEFVDGL-------SVLRGLRLSWT-------- 46
AL YF GWN+FD ++V S+V +M ++ ++ R +RL+
Sbjct: 1302 ALRQYYFTNGWNLFDCVIVVLSIVSMMISALEEQKHIPFPPTLFRIVRLARIGRILRLVR 1361
Query: 47 ---TMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSK 86
++ LL ++ ++ +L N+ +L ++++I+A+ GM F K
Sbjct: 1362 AARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAIFGMSWFCK 1404
>gi|355559771|gb|EHH16499.1| hypothetical protein EGK_11787 [Macaca mulatta]
Length = 1956
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEFVDGLSVLRGLRL--------SWTTMKVLLSIIIST 58
YFQ WNIFD I+VT SL++L LSVLR RL SW T+ L+ II ++
Sbjct: 724 YFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNS 783
Query: 59 IGALGNLTFVLVIVIYIFAVIGMQLFSKDYTSEK 92
+GALGNLT +L I++++FA++G QL ++Y + +
Sbjct: 784 VGALGNLTIILAIIVFVFALVGKQLLGENYRNNR 817
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 7 YFQCGWNIFDLIVVTASLVDLMTEF--VDGLSVLRGLRLSWTT-----MKVLLSIIISTI 59
Y + WN D V+T + V + + GL R LR T +KV++ +I+++
Sbjct: 184 YLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALINSV 243
Query: 60 GALGNLTFVLVIVIYIFAVIGMQLFSKDYTSE 91
L ++T + + + +FA++G+QLF + ++
Sbjct: 244 KKLADVTILTIFCLSVFALVGLQLFKGNLKNK 275
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 2 ALSNDYFQCGWNIFDLIVVTASLVDLM-TEFVDGL------SVLRGLRLSW--------- 45
AL YF GWN+FD IVV S+ L+ + + L ++ R +RL+
Sbjct: 1529 ALRQYYFTNGWNVFDFIVVVLSIASLVFSAILKSLQNYFSPTLFRVIRLARIGRILRLIR 1588
Query: 46 --TTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLF 84
++ LL ++ ++ AL N+ +L +V++I+++ GM F
Sbjct: 1589 GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSF 1629
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 5 NDYFQCGWNIFDLIVVTASLVDLMTEFVD--------GLSVLRGLRL-----SWTTMKVL 51
YF W D ++V SL L + ++ L LR LR + M+V+
Sbjct: 1211 KKYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALRPLRALSRFEGMRVV 1270
Query: 52 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKDY 88
+ ++ I ++ N+ V +I IF+++G+ LF+ +
Sbjct: 1271 VDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF 1307
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.143 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,333,789,938
Number of Sequences: 23463169
Number of extensions: 38665168
Number of successful extensions: 221543
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 1151
Number of HSP's that attempted gapping in prelim test: 204441
Number of HSP's gapped (non-prelim): 11479
length of query: 99
length of database: 8,064,228,071
effective HSP length: 68
effective length of query: 31
effective length of database: 6,468,732,579
effective search space: 200530709949
effective search space used: 200530709949
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)