Query psy13563
Match_columns 577
No_of_seqs 314 out of 2458
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 22:26:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 6.5E-88 2.2E-92 748.4 60.5 517 2-559 45-604 (605)
2 3d2f_A Heat shock protein homo 100.0 2E-88 7E-93 757.8 52.7 528 2-563 44-630 (675)
3 2kho_A Heat shock protein 70; 100.0 1.9E-86 6.5E-91 736.6 50.2 517 2-559 45-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 3.5E-81 1.2E-85 688.1 38.8 471 2-499 46-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 6.4E-71 2.2E-75 601.8 40.7 428 2-489 44-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.9E-50 1.3E-54 426.6 30.4 302 2-306 65-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 2E-49 6.9E-54 419.6 31.7 301 2-305 60-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.6E-47 5.4E-52 407.2 26.2 303 2-307 55-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 2.6E-46 9E-51 394.3 28.8 296 2-305 45-383 (383)
10 4e81_A Chaperone protein DNAK; 100.0 7.3E-38 2.5E-42 300.6 28.6 215 314-559 2-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 3.3E-35 1.1E-39 284.9 30.2 215 316-561 1-215 (227)
12 3n8e_A Stress-70 protein, mito 100.0 3.5E-31 1.2E-35 245.8 17.8 163 312-499 19-181 (182)
13 1jce_A ROD shape-determining p 100.0 5.7E-31 1.9E-35 273.1 15.3 218 73-306 75-328 (344)
14 3h0x_A 78 kDa glucose-regulate 100.0 7.8E-29 2.7E-33 224.3 17.2 151 315-489 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 5.6E-29 1.9E-33 224.8 14.8 151 315-489 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 9.1E-29 3.1E-33 223.2 11.5 150 315-489 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 99.9 7.9E-27 2.7E-31 212.2 15.8 151 315-489 2-152 (152)
18 1q5l_A Chaperone protein DNAK; 99.9 2.2E-21 7.5E-26 171.8 12.2 117 310-426 14-130 (135)
19 3h1q_A Ethanolamine utilizatio 99.9 2.8E-21 9.4E-26 193.4 14.1 181 75-301 70-272 (272)
20 2ych_A Competence protein PILM 99.8 4.6E-20 1.6E-24 193.4 13.1 255 15-302 54-373 (377)
21 2fsj_A Hypothetical protein TA 99.8 7.8E-20 2.7E-24 189.1 8.8 199 70-302 93-343 (346)
22 4a2a_A Cell division protein F 99.8 3.3E-19 1.1E-23 188.5 13.5 217 69-303 48-393 (419)
23 1k8k_A ARP3, actin-like protei 99.7 8E-17 2.7E-21 171.0 10.9 201 97-302 107-386 (418)
24 2fxu_A Alpha-actin-1, actin, a 99.7 5.7E-17 1.9E-21 169.7 8.5 188 98-302 101-348 (375)
25 2zgy_A Plasmid segregation pro 99.5 4.1E-14 1.4E-18 144.6 7.4 203 68-301 70-319 (320)
26 3lof_A Heat shock 70 kDa prote 99.4 3.1E-12 1.1E-16 109.6 12.3 85 477-562 3-87 (113)
27 4ehu_A Activator of 2-hydroxyi 99.3 3.9E-12 1.3E-16 127.1 7.1 189 72-305 33-256 (276)
28 2p32_A Heat shock 70 kDa prote 99.2 1.5E-11 5E-16 106.5 7.6 89 478-567 13-101 (120)
29 1k8k_B ARP2, actin-like protei 99.2 6.1E-12 2.1E-16 132.2 5.2 186 98-302 105-363 (394)
30 3js6_A Uncharacterized PARM pr 99.2 1.6E-12 5.3E-17 134.4 0.5 191 99-306 115-339 (355)
31 1ud0_A HSC70, 70 kDa heat-shoc 99.1 1.5E-10 5.2E-15 99.1 6.6 85 481-566 2-86 (113)
32 4apw_A ALP12; actin-like prote 98.9 1.2E-09 4E-14 111.8 5.7 176 98-304 106-325 (329)
33 1nbw_A Glycerol dehydratase re 98.5 2.4E-08 8.2E-13 105.2 2.6 172 112-301 371-604 (607)
34 2d0o_A DIOL dehydratase-reacti 98.5 3.7E-07 1.3E-11 95.9 10.9 175 110-302 367-603 (610)
35 3dwl_A Actin-related protein 3 98.3 2.2E-07 7.4E-12 98.1 4.3 213 77-302 104-395 (427)
36 3qb0_A Actin-related protein 4 98.0 1.4E-05 4.8E-10 85.3 9.9 79 75-163 92-174 (498)
37 4fo0_A Actin-related protein 8 97.8 0.00016 5.6E-09 79.6 14.0 66 91-163 187-258 (593)
38 1hux_A Activator of (R)-2-hydr 96.7 0.0031 1.1E-07 62.0 8.0 72 228-304 186-257 (270)
39 4bc3_A Xylulose kinase; transf 96.1 0.014 4.8E-07 63.2 9.0 78 227-306 407-484 (538)
40 3l0q_A Xylulose kinase; xlylul 96.0 0.011 3.8E-07 64.3 8.2 86 218-308 406-494 (554)
41 2itm_A Xylulose kinase, xylulo 95.8 0.012 4.3E-07 62.7 7.4 53 254-307 386-438 (484)
42 3hz6_A Xylulokinase; xylulose, 95.8 0.021 7E-07 61.5 8.7 82 220-308 373-455 (511)
43 3ll3_A Gluconate kinase; xylul 95.7 0.021 7.1E-07 61.4 8.4 53 254-308 393-445 (504)
44 2zf5_O Glycerol kinase; hypert 95.7 0.025 8.5E-07 60.6 8.8 80 222-307 365-444 (497)
45 3i8b_A Xylulose kinase; strain 95.6 0.016 5.3E-07 62.5 6.9 80 222-307 395-475 (515)
46 3ezw_A Glycerol kinase; glycer 95.5 0.027 9.1E-07 60.9 8.6 85 220-309 370-455 (526)
47 3g25_A Glycerol kinase; IDP007 95.2 0.026 8.7E-07 60.6 7.2 82 222-308 374-456 (501)
48 2ews_A Pantothenate kinase; PA 95.2 0.05 1.7E-06 53.6 8.5 77 220-301 206-286 (287)
49 3jvp_A Ribulokinase; PSI-II, N 95.1 0.022 7.7E-07 62.1 6.4 79 222-306 410-490 (572)
50 4e1j_A Glycerol kinase; struct 95.0 0.023 8E-07 61.2 6.0 53 254-308 425-477 (520)
51 3h3n_X Glycerol kinase; ATP-bi 95.0 0.031 1.1E-06 60.0 6.9 83 221-308 372-455 (506)
52 2dpn_A Glycerol kinase; thermu 95.0 0.048 1.6E-06 58.3 8.3 81 222-307 368-449 (495)
53 2p3r_A Glycerol kinase; glycer 94.9 0.029 1E-06 60.3 6.4 82 222-308 371-453 (510)
54 3ifr_A Carbohydrate kinase, FG 94.9 0.031 1.1E-06 60.0 6.5 81 221-307 370-451 (508)
55 2d4w_A Glycerol kinase; alpha 94.7 0.079 2.7E-06 56.8 9.1 82 221-307 372-454 (504)
56 2w40_A Glycerol kinase, putati 94.0 0.13 4.6E-06 55.0 9.1 81 222-307 376-458 (503)
57 2uyt_A Rhamnulokinase; rhamnos 93.8 0.073 2.5E-06 56.8 6.4 78 219-302 360-438 (489)
58 4am6_A Actin-like protein ARP8 92.8 0.059 2E-06 58.5 3.7 60 98-163 222-282 (655)
59 2i7n_A Pantothenate kinase 1; 92.8 0.18 6.2E-06 51.1 7.0 47 255-301 306-358 (360)
60 3h6e_A Carbohydrate kinase, FG 89.5 0.29 9.9E-06 52.0 4.9 72 227-304 362-436 (482)
61 3mdq_A Exopolyphosphatase; str 85.8 13 0.00043 36.8 14.2 49 114-163 93-143 (315)
62 3qbx_A Anhydro-N-acetylmuramic 80.4 4.4 0.00015 41.0 8.2 72 228-302 260-335 (371)
63 4g9i_A Hydrogenase maturation 78.5 4.3 0.00015 45.5 8.1 64 236-304 692-760 (772)
64 3eno_A Putative O-sialoglycopr 77.5 5.9 0.0002 39.6 8.2 69 233-306 233-306 (334)
65 3ttc_A HYPF, transcriptional r 77.4 5.4 0.00019 43.6 8.3 65 234-303 584-651 (657)
66 3vth_A Hydrogenase maturation 77.3 4.1 0.00014 45.5 7.5 67 235-306 679-750 (761)
67 2ivn_A O-sialoglycoprotein end 77.0 5 0.00017 40.0 7.5 66 233-303 228-298 (330)
68 1t6c_A Exopolyphosphatase; alp 76.8 0.79 2.7E-05 45.7 1.5 50 113-163 100-150 (315)
69 3cqy_A Anhydro-N-acetylmuramic 73.8 6.3 0.00022 39.8 7.2 70 227-302 266-341 (370)
70 2e2o_A Hexokinase; acetate and 73.0 6 0.0002 38.6 6.8 48 254-302 239-286 (299)
71 3cer_A Possible exopolyphospha 69.4 2.5 8.7E-05 42.5 3.1 86 72-163 63-158 (343)
72 3ven_A O-carbamoyltransferase 66.9 14 0.00049 39.6 8.5 80 223-307 280-361 (576)
73 3hi0_A Putative exopolyphospha 65.7 3.4 0.00012 44.0 3.3 50 113-163 103-152 (508)
74 2gup_A ROK family protein; sug 65.5 24 0.00082 34.0 9.4 49 254-302 227-286 (292)
75 3r8e_A Hypothetical sugar kina 62.0 22 0.00077 34.9 8.5 49 254-302 260-318 (321)
76 2zqm_A Prefoldin beta subunit 58.9 47 0.0016 27.1 8.7 50 513-566 67-116 (117)
77 4htl_A Beta-glucoside kinase; 57.3 23 0.00078 34.4 7.5 50 254-303 237-291 (297)
78 4db3_A Glcnac kinase, N-acetyl 56.6 24 0.00082 34.8 7.6 82 73-160 59-156 (327)
79 2qm1_A Glucokinase; alpha-beta 56.3 35 0.0012 33.2 8.8 85 73-161 42-145 (326)
80 1u6z_A Exopolyphosphatase; alp 55.6 4.2 0.00014 43.4 1.8 88 70-163 55-149 (513)
81 2aa4_A Mannac kinase, putative 52.5 20 0.0007 34.4 6.2 48 254-301 233-286 (289)
82 3vgl_A Glucokinase; ROK family 52.1 39 0.0013 33.1 8.3 83 72-161 35-133 (321)
83 3vov_A Glucokinase, hexokinase 49.2 42 0.0014 32.6 7.9 81 75-160 37-134 (302)
84 1zc6_A Probable N-acetylglucos 45.5 17 0.00058 35.4 4.4 64 229-302 227-292 (305)
85 3bex_A Type III pantothenate k 44.7 17 0.00057 34.6 4.0 152 95-268 55-224 (249)
86 1saz_A Probable butyrate kinas 44.6 52 0.0018 33.2 8.0 49 254-302 295-347 (381)
87 1msz_A DNA-binding protein smu 44.0 22 0.00076 27.7 3.8 28 100-127 34-61 (86)
88 1hnj_A Beta-ketoacyl-acyl carr 43.9 25 0.00087 34.2 5.4 48 229-279 212-259 (317)
89 4fla_A Regulation of nuclear P 42.4 94 0.0032 26.9 8.1 48 512-559 96-146 (152)
90 1zbs_A Hypothetical protein PG 42.1 9.8 0.00033 37.0 1.9 68 228-303 210-280 (291)
91 2hoe_A N-acetylglucosamine kin 41.6 69 0.0023 32.1 8.3 83 73-161 123-223 (380)
92 3htv_A D-allose kinase, alloki 39.3 81 0.0028 30.6 8.2 49 254-302 239-298 (310)
93 2ebd_A 3-oxoacyl-[acyl-carrier 38.0 34 0.0012 33.1 5.2 45 232-279 207-251 (309)
94 1ub7_A 3-oxoacyl-[acyl-carrier 37.5 33 0.0011 33.5 5.0 46 231-279 216-261 (322)
95 4am6_A Actin-like protein ARP8 36.3 15 0.0005 40.0 2.3 24 255-278 501-524 (655)
96 3en9_A Glycoprotease, O-sialog 35.9 38 0.0013 36.0 5.5 41 233-278 232-272 (540)
97 2ap1_A Putative regulator prot 34.5 29 0.00098 34.1 4.0 83 73-161 59-157 (327)
98 2q2r_A Glucokinase 1, putative 32.9 62 0.0021 32.3 6.3 67 73-140 67-144 (373)
99 3epq_A Putative fructokinase; 29.7 83 0.0028 30.5 6.4 49 254-302 224-288 (302)
100 1mzj_A Beta-ketoacylsynthase I 29.7 38 0.0013 33.4 4.0 46 231-279 227-272 (339)
101 1zow_A 3-oxoacyl-[acyl-carrier 29.4 43 0.0015 32.4 4.3 46 231-279 208-253 (313)
102 2x3e_A 3-oxoacyl-[acyl-carrier 29.2 40 0.0014 33.1 4.1 46 231-279 220-265 (331)
103 3aap_A Ectonucleoside triphosp 28.5 17 0.00059 36.5 1.1 39 124-163 108-152 (353)
104 1naf_A ADP-ribosylation factor 28.4 2.9E+02 0.01 23.9 11.3 110 457-571 30-152 (158)
105 2nr5_A Hypothetical protein SO 28.4 1.5E+02 0.005 20.5 6.0 20 512-531 44-63 (67)
106 3zyy_X Iron-sulfur cluster bin 28.1 1.1E+02 0.0037 33.2 7.3 59 216-275 497-555 (631)
107 4ewp_A 3-oxoacyl-[acyl-carrier 27.3 1.1E+02 0.0036 30.2 6.8 43 237-279 66-110 (350)
108 4db3_A Glcnac kinase, N-acetyl 26.9 1.2E+02 0.004 29.6 7.1 48 254-301 269-324 (327)
109 2ch5_A NAGK protein; transfera 26.7 36 0.0012 33.6 3.2 68 73-140 44-117 (347)
110 1zxo_A Conserved hypothetical 26.3 12 0.0004 36.4 -0.6 68 230-302 210-277 (291)
111 2ivn_A O-sialoglycoprotein end 25.7 1E+02 0.0035 30.2 6.3 44 229-272 43-86 (330)
112 4dfe_A 3-oxoacyl-[acyl-carrier 24.7 87 0.003 30.7 5.6 47 229-278 228-274 (333)
113 2yhw_A Bifunctional UDP-N-acet 24.6 1.8E+02 0.0062 28.3 8.0 85 73-161 64-168 (343)
114 3eno_A Putative O-sialoglycopr 24.2 1.1E+02 0.0036 30.3 6.1 45 230-274 49-93 (334)
115 1u6e_A 3-oxoacyl-[acyl-carrier 24.2 53 0.0018 32.1 3.9 44 232-278 229-272 (335)
116 3r6m_A YEAZ, resuscitation pro 24.2 82 0.0028 29.0 4.9 66 233-298 35-104 (213)
117 3nmd_A CGMP dependent protein 23.7 2.3E+02 0.0079 21.1 6.8 36 466-501 30-65 (72)
118 1z6r_A MLC protein; transcript 23.7 1.3E+02 0.0045 30.2 6.9 85 73-161 120-223 (406)
119 3ov2_A Curcumin synthase; type 23.6 2E+02 0.0069 28.9 8.2 54 226-279 95-149 (393)
120 3vgl_A Glucokinase; ROK family 23.6 53 0.0018 32.1 3.7 49 254-302 252-311 (321)
121 1nfn_A Apolipoprotein E3; lipi 23.6 3.4E+02 0.012 24.2 8.9 64 478-559 105-168 (191)
122 3oit_A OS07G0271500 protein; t 23.5 3.4E+02 0.011 27.1 9.9 53 227-279 90-143 (387)
123 2a01_A Apolipoprotein A-I; fou 23.5 1.8E+02 0.0062 27.1 7.3 46 511-556 168-213 (243)
124 2gel_A Putative GRAM negative 22.7 90 0.0031 29.0 4.9 66 233-298 34-103 (231)
125 3awk_A Chalcone synthase-like 22.4 3E+02 0.01 27.6 9.3 50 230-279 112-162 (402)
126 3s84_A Apolipoprotein A-IV; fo 22.1 4.5E+02 0.015 24.9 9.9 18 483-500 70-87 (273)
127 3lay_A Zinc resistance-associa 21.8 4.1E+02 0.014 23.4 9.7 64 454-528 66-129 (175)
128 1i88_A CHS2, chalcone synthase 21.7 2.8E+02 0.0095 27.6 8.9 50 230-279 99-149 (389)
129 1ted_A PKS18; thiolase fold, s 21.6 53 0.0018 33.2 3.3 45 231-278 283-327 (393)
130 3s21_A 3-oxoacyl-[ACP] synthas 21.3 1.1E+02 0.0039 30.0 5.7 48 228-278 239-286 (345)
131 3a5r_A Benzalacetone synthase; 21.3 2.2E+02 0.0074 28.5 7.9 50 230-279 95-145 (387)
132 1o3x_A ADP-ribosylation factor 21.2 3.8E+02 0.013 22.7 8.7 43 523-567 97-139 (140)
133 1sz2_A Glucokinase, glucose ki 21.1 1.5E+02 0.0051 28.9 6.5 45 94-141 64-119 (332)
134 1z05_A Transcriptional regulat 20.9 1.3E+02 0.0045 30.6 6.2 85 73-161 143-245 (429)
135 1ee0_A 2-pyrone synthase; poly 20.8 2.5E+02 0.0086 28.2 8.3 51 229-279 103-154 (402)
136 3cj1_A Ectonucleoside triphosp 20.8 22 0.00075 37.1 0.2 14 150-163 189-202 (456)
137 3euo_A Type III pentaketide sy 20.7 2.4E+02 0.0084 28.1 8.1 50 231-280 79-129 (379)
138 1xes_A Dihydropinosylvin synth 20.4 2.7E+02 0.0092 28.1 8.5 51 229-279 121-172 (413)
139 3qvl_A Putative hydantoin race 20.3 1.3E+02 0.0044 28.2 5.5 54 235-299 160-213 (245)
140 2a6a_A Hypothetical protein TM 20.3 90 0.0031 28.8 4.3 42 231-272 43-84 (218)
141 3led_A 3-oxoacyl-acyl carrier 20.2 1.2E+02 0.0039 30.8 5.5 45 236-280 120-166 (392)
142 3r8e_A Hypothetical sugar kina 20.2 29 0.001 34.0 1.0 86 73-161 55-155 (321)
143 2d3m_A Pentaketide chromone sy 20.1 3.2E+02 0.011 27.4 8.9 53 227-279 109-162 (406)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=6.5e-88 Score=748.39 Aligned_cols=517 Identities=47% Similarity=0.707 Sum_probs=483.4
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEe-cCCCceeEEeecCCCCCeeecHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKE-KNSKPHIEVNTGTSEGTKIFAPEEISAM 80 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~-~~~~~~~~v~~~~~~~~~~~~peev~a~ 80 (577)
+++++||..|+.++..+|.++++++|||||+.++++.++.+.++|||+++. .+|.+.+.+ . ++.++|++++++
T Consensus 45 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~--~----~~~~~p~ei~a~ 118 (605)
T 4b9q_A 45 DGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--K----GQKMAPPQISAE 118 (605)
T ss_dssp TSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEE--T----TEEECHHHHHHH
T ss_pred CCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEE--C----CEEECHHHHHHH
Confidence 468999999999999999999999999999999999999999999999986 456555443 3 478999999999
Q ss_pred HHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCC
Q psy13563 81 VLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGK 160 (577)
Q Consensus 81 ~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gg 160 (577)
+|++|++.|+.++|.++.++|||||++|++.||+++++|+++|||+++++++||+|||++ |++.....+.++||||+||
T Consensus 119 iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAla-ygl~~~~~~~~vlV~DlGG 197 (605)
T 4b9q_A 119 VLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALA-YGLDKGTGNRTIAVYDLGG 197 (605)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHH-HHTTSCCSSEEEEEEEECS
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHH-hhhhccCCCCEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999 9988766678999999999
Q ss_pred Cch-------------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCc
Q psy13563 161 DLR-------------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNF 202 (577)
Q Consensus 161 gt~-------------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~ 202 (577)
||+ ||..++ ...++.++..+++.+.+|+.+||++|+.||...
T Consensus 198 GT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~ 277 (605)
T 4b9q_A 198 GAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ 277 (605)
T ss_dssp SCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCC
Confidence 998 888877 456788888899999999999999999999999
Q ss_pred eEEEeeccccCC----CcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 203 QVKIEIESFFEG----DDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 203 ~~~i~i~~~~~~----~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
.+.+.++.+..+ .++.++|||++|+++++|+++++..+|+++|+++++...+|+.|+||||+||+|+|++.|++.|
T Consensus 278 ~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f 357 (605)
T 4b9q_A 278 QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357 (605)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH
T ss_pred CeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh
Confidence 988888765433 5788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhHHHHHHhhhhCCCCCccEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCc
Q psy13563 279 NNKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQN 358 (577)
Q Consensus 279 ~~~~i~~~~~p~~aVa~GAa~~a~~ls~~~~~~~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~ 358 (577)
+..+..+.||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.+.+|||+|+++|++++..|++..|+|+
T Consensus 358 -g~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~ 434 (605)
T 4b9q_A 358 -GKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQS 434 (605)
T ss_dssp -TSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCC
T ss_pred -ccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCc
Confidence 7888899999999999999999999987 4589999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCC
Q psy13563 359 TVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDID 438 (577)
Q Consensus 359 ~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (577)
.+.|.||||++..+.+|..||+|.|.++|++|+|.++|+|+|.+|.||+|+|++.++.||++.+++|+
T Consensus 435 ~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~------------ 502 (605)
T 4b9q_A 435 AVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK------------ 502 (605)
T ss_dssp EEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEE------------
T ss_pred eEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEec------------
Confidence 99999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHH
Q psy13563 439 KGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTME 518 (577)
Q Consensus 439 ~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~ 518 (577)
+. ..||++++++++++++++..+|++.+++.++||+||+|+|++++.|++ +...+++++|+.+.
T Consensus 503 ------------~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~ 566 (605)
T 4b9q_A 503 ------------AS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIE 566 (605)
T ss_dssp ------------SC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHH
T ss_pred ------------CC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHH
Confidence 43 579999999999999999999999999999999999999999999985 56789999999999
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13563 519 EAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 559 (577)
Q Consensus 519 ~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e 559 (577)
..++++++||+.+ +.++|++++++|++.+.|+..++++
T Consensus 567 ~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 567 SALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999976 5899999999999999999998764
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2e-88 Score=757.76 Aligned_cols=528 Identities=24% Similarity=0.407 Sum_probs=483.6
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEe-cCCCceeEEeecCCCCCeeecHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKE-KNSKPHIEVNTGTSEGTKIFAPEEISAM 80 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~-~~~~~~~~v~~~~~~~~~~~~peev~a~ 80 (577)
+++++||..|+.++..+|.||++++|||||+.++++.++.+.++|||+++. .+|.+.+.+.+. |..+.|+|++|+++
T Consensus 44 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~--g~~~~~speei~a~ 121 (675)
T 3d2f_A 44 PKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFA--GEKHVFSATQLAAM 121 (675)
T ss_dssp SSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHHHHHTTCCSEEEECTTSBEEEEEEET--TEEEEEEHHHHHHH
T ss_pred CCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHHHHHhhCCeeEEEcCCCceEEEEEeC--CCCceEcHHHHHHH
Confidence 357899999999999999999999999999999999999999999999987 578877777765 55678999999999
Q ss_pred HHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeeccccccc------CCCcEEE
Q psy13563 81 VLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRK------KERRNVL 154 (577)
Q Consensus 81 ~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~------~~~~~vl 154 (577)
+|++|++.|+.++|.++.++|||||++|++.||+++++|+++||+++++|++||+|||++ |++.+. ..+.++|
T Consensus 122 ~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAla-ygl~~~~~~~~~~~~~~vl 200 (675)
T 3d2f_A 122 FIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVS-YGIFKTDLPEGEEKPRIVA 200 (675)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHH-HHHHCSCCCCSSSCCEEEE
T ss_pred HHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHH-HhhhccccccccCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999 987552 3567899
Q ss_pred EEeCCCCch---------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCC
Q psy13563 155 VFDLGKDLR---------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSS 200 (577)
Q Consensus 155 V~D~Gggt~---------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~ 200 (577)
|||+||||+ ||..|+ .++++.++..+++++.+|+.+||++|+.||.
T Consensus 201 V~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~ 280 (675)
T 3d2f_A 201 FVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSA 280 (675)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 999999998 888887 3567888888999999999999999999999
Q ss_pred CceEEEeeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCC
Q psy13563 201 NFQVKIEIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNN 280 (577)
Q Consensus 201 ~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~ 280 (577)
...+.+.++.+.++.++.++|||++|+++++|+++++..+|+++|+++++++.+|+.|+||||+||+|+|++.|++.| +
T Consensus 281 ~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g 359 (675)
T 3d2f_A 281 NTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-G 359 (675)
T ss_dssp CSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-T
T ss_pred CCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-C
Confidence 888889998888888999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCCCCCchhHHHhHHHHHHhhhhCCCCCccEEEeeeccceeeEEEeCC----EEEEEecCCCCCCceeEEEEEcccCC
Q psy13563 281 KEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGG----VMTKLIPRNTVIPTKKSQIFSTAADN 356 (577)
Q Consensus 281 ~~i~~~~~p~~aVa~GAa~~a~~ls~~~~~~~~~~~d~~~~sigi~~~~~----~~~~li~~g~~iP~~~~~~~~~~~d~ 356 (577)
..+..+.||++|||+|||++|+.+++.++++++.+.|++|++||+++.++ .+.+|||+|++||++++.+|++..++
T Consensus 360 ~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~ 439 (675)
T 3d2f_A 360 KPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF 439 (675)
T ss_dssp SCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE
T ss_pred CCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc
Confidence 77888999999999999999999999888889999999999999999877 49999999999999999999987654
Q ss_pred CceEEEEE-EecCCCCcc-CCceeeEEEEeCCCCCCCCCC-eEEEEEEEcCCccEEEEee----------eccCCceeeE
Q psy13563 357 QNTVTIQV-YEGERPMTK-DNHLLGKFDLTGIPPAPRGVP-QIEVTFEIDANGILQVSAE----------DKGTGNKEKI 423 (577)
Q Consensus 357 q~~~~i~i-~eg~~~~~~-~~~~lg~~~l~~~~~~~~g~~-~i~v~f~id~~g~l~v~~~----------~~~~~~~~~~ 423 (577)
+ +.+ |+|++.++. +|..||+|.|.++|+++.|.+ +|+|+|.+|.||+|+|++. ++.+|++.++
T Consensus 440 ~----~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i 515 (675)
T 3d2f_A 440 S----MAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDL 515 (675)
T ss_dssp E----EEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEEC
T ss_pred e----EEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeE
Confidence 3 344 678888887 899999999999999999985 8999999999999999996 4556666655
Q ss_pred EEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy13563 424 VITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELESYAYSLKNQLQDKD 503 (577)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~ 503 (577)
+|+ +...+||+++++++++++.++..+|+..+++.+++|.||+|+|++|+.|.+.
T Consensus 516 ~i~------------------------~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~- 570 (675)
T 3d2f_A 516 TIV------------------------AHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEE- 570 (675)
T ss_dssp EEE------------------------EECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred EEe------------------------cCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 555 5555899999999999999999999999999999999999999999999763
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q psy13563 504 KLGAKITDAEKTTMEEAIDDKIKWLDEN-QDADAPEFQKKKKELEDVVQPIIAKLYQGAGG 563 (577)
Q Consensus 504 ~~~~~~~~~~~~~i~~~l~e~~~Wl~~~-~~~~~~~~~~kl~~L~~~~~~i~~r~~e~~~~ 563 (577)
+..++++++++.+...++++++||+++ .+++.++|++|+++|++++.||..|++++..+
T Consensus 571 -~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~r 630 (675)
T 3d2f_A 571 -YAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEE 630 (675)
T ss_dssp -TGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 778999999999999999999999876 67899999999999999999999999987654
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.9e-86 Score=736.62 Aligned_cols=517 Identities=47% Similarity=0.709 Sum_probs=481.0
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEe-cCCCceeEEeecCCCCCeeecHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKE-KNSKPHIEVNTGTSEGTKIFAPEEISAM 80 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~-~~~~~~~~v~~~~~~~~~~~~peev~a~ 80 (577)
+++++||..|+.++..+|.+|++++||+||+.++++.++...+.|||.++. .+|.+.+.+ + ++.++|++|+++
T Consensus 45 ~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~--~----g~~~~~~ei~a~ 118 (605)
T 2kho_A 45 DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--K----GQKMAPPQISAE 118 (605)
T ss_dssp TSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTHHHHHHHCSSCEEECTTSBEEEEE--T----TEEECHHHHHHH
T ss_pred CCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHHHHHhhcCCeEEEECCCCceEEEE--C----CEEEcHHHHHHH
Confidence 478999999999999999999999999999999999999999999999974 567666655 3 368999999999
Q ss_pred HHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCC
Q psy13563 81 VLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGK 160 (577)
Q Consensus 81 ~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gg 160 (577)
+|++|++.|+.++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++ |++.....+.++||||+||
T Consensus 119 ~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAla-y~l~~~~~~~~vlV~DlGG 197 (605)
T 2kho_A 119 VLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALA-YGLDKGTGNRTIAVYDLGG 197 (605)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHH-TTTTSSSSEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHH-hhhcccCCCCEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999 9887654578999999999
Q ss_pred Cch-------------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCc
Q psy13563 161 DLR-------------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNF 202 (577)
Q Consensus 161 gt~-------------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~ 202 (577)
||+ ||..|+ .++++.++..+++++.+|+.+||++|+.||...
T Consensus 198 GT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~ 277 (605)
T 2kho_A 198 GTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ 277 (605)
T ss_dssp SCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC
Confidence 998 888876 345788888899999999999999999999998
Q ss_pred eEEEeeccccCC----CcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 203 QVKIEIESFFEG----DDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 203 ~~~i~i~~~~~~----~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
.+.+.++.+.++ .++.++|||++|+++++|+++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|++.|
T Consensus 278 ~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f 357 (605)
T 2kho_A 278 QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357 (605)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH
T ss_pred ceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc
Confidence 888888765542 4677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhHHHHHHhhhhCCCCCccEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCc
Q psy13563 279 NNKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQN 358 (577)
Q Consensus 279 ~~~~i~~~~~p~~aVa~GAa~~a~~ls~~~~~~~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~ 358 (577)
+..+..++||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.+.+|||+|+++|++++..|++..|+|+
T Consensus 358 -g~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~ 434 (605)
T 2kho_A 358 -GKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQS 434 (605)
T ss_dssp -SSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCC
T ss_pred -CCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCce
Confidence 6778899999999999999999999876 4578899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCC
Q psy13563 359 TVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDID 438 (577)
Q Consensus 359 ~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (577)
.+.|.+|||++.++.+|..||+|.|.++|++|+|.++|+++|.+|.||+|+|++.+..+|++.+++|+
T Consensus 435 ~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~------------ 502 (605)
T 2kho_A 435 AVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK------------ 502 (605)
T ss_dssp EEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEEC------------
T ss_pred EEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccc------------
Confidence 99999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHH
Q psy13563 439 KGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTME 518 (577)
Q Consensus 439 ~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~ 518 (577)
+. ..||++++++++++++++..+|+..+++.+++|+||+|+|++++.|.+ +..++++++|+.+.
T Consensus 503 ------------~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~ 566 (605)
T 2kho_A 503 ------------AS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIE 566 (605)
T ss_dssp ------------TT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHH
T ss_pred ------------cc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHH
Confidence 44 789999999999999999999999999999999999999999999975 56789999999999
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13563 519 EAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 559 (577)
Q Consensus 519 ~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e 559 (577)
..++++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 567 ~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 567 SALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999854 8899999999999999999999864
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=3.5e-81 Score=688.07 Aligned_cols=471 Identities=60% Similarity=0.921 Sum_probs=443.0
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCCCCCeeecHHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTSEGTKIFAPEEISAMV 81 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~peev~a~~ 81 (577)
+++++||..|+.++..+|.+|++++|||||+.++++.++..+++|||.++..+|.+.+.+.+. +..+.++|+++++++
T Consensus 46 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~~--~~~~~~sp~ei~a~~ 123 (554)
T 1yuw_A 46 DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK--GETKSFYPEEVSSMV 123 (554)
T ss_dssp SSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHHHHHTTCSSEEEEETTEEEEEEEET--TEEEEECHHHHHHHH
T ss_pred CCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHHHHhhcCCeEEEecCCceEEEEEEC--CCceEEcHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999998788888888876 556899999999999
Q ss_pred HHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeeccccccc-CCCcEEEEEeCCC
Q psy13563 82 LGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRK-KERRNVLVFDLGK 160 (577)
Q Consensus 82 L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~-~~~~~vlV~D~Gg 160 (577)
|++|++.|+.++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++ |++.+. ..+.++||||+||
T Consensus 124 L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAla-y~~~~~~~~~~~vlV~D~Gg 202 (554)
T 1yuw_A 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIA-YGLDKKVGAERNVLIFDLGG 202 (554)
T ss_dssp HHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHH-TTCSTTCSSCEEEEEEEECS
T ss_pred HHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHH-HHhhccCCCCcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999 988764 2468999999999
Q ss_pred Cch---------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEE
Q psy13563 161 DLR---------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKI 206 (577)
Q Consensus 161 gt~---------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i 206 (577)
||+ ||..|+ .++++.++..+++.+.+|+.+||++|+.||....+.+
T Consensus 203 GT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i 282 (554)
T 1yuw_A 203 GTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASI 282 (554)
T ss_dssp SCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEE
Confidence 998 888876 3567888888999999999999999999999999999
Q ss_pred eeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCC
Q psy13563 207 EIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRG 286 (577)
Q Consensus 207 ~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~ 286 (577)
.++.+.++.++...|||++|+++++|+++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|++.|++.++..+
T Consensus 283 ~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~ 362 (554)
T 1yuw_A 283 EIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKS 362 (554)
T ss_dssp EETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCC
T ss_pred EEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccC
Confidence 99988888899999999999999999999999999999999999999999999999999999999999999977888889
Q ss_pred CCchhHHHhHHHHHHhhhhCC--CCCccEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEE
Q psy13563 287 VNPDEAVAYGAAVQAGVLSGE--QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQV 364 (577)
Q Consensus 287 ~~p~~aVa~GAa~~a~~ls~~--~~~~~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i 364 (577)
.||++|||+|||++|+.+++. ++.+++.+.|++|++||+++.+|.+.++|++|+++|++++..|++..|+|+.+.|.|
T Consensus 363 ~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v 442 (554)
T 1yuw_A 363 INPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQV 442 (554)
T ss_dssp SCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEE
T ss_pred CCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEE
Confidence 999999999999999999873 556788999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCccCCceeeEEEEeCCCCCCCCCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcc
Q psy13563 365 YEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNK 444 (577)
Q Consensus 365 ~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (577)
|||++..+.+|..||+|.|.++|++++|.++|+++|.+|.||+|+|++.++.+|++.+++++
T Consensus 443 ~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~------------------ 504 (554)
T 1yuw_A 443 YEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT------------------ 504 (554)
T ss_dssp EESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEEC------------------
T ss_pred EecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEe------------------
Confidence 99999999999999999999999999999999999999999999999999999999888887
Q ss_pred eeeeeecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13563 445 EKIVITNDQNRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELESYAYSLKNQL 499 (577)
Q Consensus 445 ~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l 499 (577)
+....||++++++++++++++..+|+..+++.++||+||+|+|.+|+.|
T Consensus 505 ------~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 505 ------NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp ------CCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred ------cCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5557799999999999999999999999999999999999999988655
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=6.4e-71 Score=601.78 Aligned_cols=428 Identities=53% Similarity=0.807 Sum_probs=391.5
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCCCCCeeecHHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTSEGTKIFAPEEISAMV 81 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~peev~a~~ 81 (577)
+++++||..|+.++..+| ++++++||+||+++. +.++ | +.++|+++++++
T Consensus 44 ~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~-------------------------~~~~--g--~~~~~~ei~a~~ 93 (509)
T 2v7y_A 44 NGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK-------------------------VEIE--G--KQYTPQEISAII 93 (509)
T ss_dssp SSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-------------------------EEET--T--EEECHHHHHHHH
T ss_pred CCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-------------------------EEEC--C--EEEcHHHHHHHH
Confidence 468999999999999999 999999999998542 1222 2 579999999999
Q ss_pred HHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 82 LGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 82 L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
|++|++.|+.++|.++..+|||||++|++.||+++++|++.||++++++++||+|||++ |++... .+.++||||+|||
T Consensus 94 L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAla-y~~~~~-~~~~vlV~D~GgG 171 (509)
T 2v7y_A 94 LQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALA-YGLDKE-EDQTILVYDLGGG 171 (509)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHH-TTGGGS-CSEEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHH-HhhccC-CCCEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 988764 5789999999999
Q ss_pred ch---------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEEe
Q psy13563 162 LR---------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKIE 207 (577)
Q Consensus 162 t~---------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i~ 207 (577)
|+ ||+.++ ..+++.++..+++.+.+|+.+||++|+.||......+.
T Consensus 172 T~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~ 251 (509)
T 2v7y_A 172 TFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQIS 251 (509)
T ss_dssp CEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEE
T ss_pred eEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 98 888876 34568888888999999999999999999999888888
Q ss_pred eccccC---C-CcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCC
Q psy13563 208 IESFFE---G-DDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEP 283 (577)
Q Consensus 208 i~~~~~---~-~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i 283 (577)
++.+.+ | .++.++|||++|+++++|+++++..+|.++|+++++.+.+|+.|+||||+|++|+|++.|++.| +..+
T Consensus 252 l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~ 330 (509)
T 2v7y_A 252 LPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEP 330 (509)
T ss_dssp EEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCC
T ss_pred EeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCc
Confidence 876543 2 4577899999999999999999999999999999999999999999999999999999999999 6778
Q ss_pred CCCCCchhHHHhHHHHHHhhhhCCCCCccEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEE
Q psy13563 284 SRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQ 363 (577)
Q Consensus 284 ~~~~~p~~aVa~GAa~~a~~ls~~~~~~~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~ 363 (577)
..+.||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.+.++|++|+++|++++..|++..|+|+.+.|.
T Consensus 331 ~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~ 408 (509)
T 2v7y_A 331 HKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIH 408 (509)
T ss_dssp BCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEE
T ss_pred CcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEE
Confidence 889999999999999999999876 457889999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCccCCceeeEEEEeCCCCCCCCCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCc
Q psy13563 364 VYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGN 443 (577)
Q Consensus 364 i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (577)
+|||++..+.+|..||+|.|.++|++++|.++|+++|++|.||+|+|++.+..+|++.+++|+
T Consensus 409 v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~----------------- 471 (509)
T 2v7y_A 409 VLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIK----------------- 471 (509)
T ss_dssp EEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEEC-----------------
T ss_pred EEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEE-----------------
Confidence 999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ceeeeeecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy13563 444 KEKIVITNDQNRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELE 489 (577)
Q Consensus 444 ~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 489 (577)
+. ..||+++++++++++.++..+|+..+++.++||+||
T Consensus 472 -------~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 472 -------SS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp -------SS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred -------ec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 44 779999999999999999999999999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.9e-50 Score=426.56 Aligned_cols=302 Identities=57% Similarity=0.860 Sum_probs=282.4
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCCCCCeeecHHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTSEGTKIFAPEEISAMV 81 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~peev~a~~ 81 (577)
+++++||..|+.++.++|.++++++||+||++++++.++...+.|||.++..+|.+.+.+.+. +....++|+++++++
T Consensus 65 ~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~--~~~~~~~~~ei~a~~ 142 (404)
T 3i33_A 65 DTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK--GETKTFFPEEISSMV 142 (404)
T ss_dssp SSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEET--TEEEEECHHHHHHHH
T ss_pred CCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeC--CCceEEcHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999899999988886 556899999999999
Q ss_pred HHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccC---CCcEEEEEeC
Q psy13563 82 LGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKK---ERRNVLVFDL 158 (577)
Q Consensus 82 L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~---~~~~vlV~D~ 158 (577)
|++|++.++.+++.++..+|||||++|++.||+++++|++.||++++.+++||+|||++ |+..... .+.+++|||+
T Consensus 143 L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~-~~~~~~~~~~~~~~vlV~D~ 221 (404)
T 3i33_A 143 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIA-YGLDKKGCAGGEKNVLIFDL 221 (404)
T ss_dssp HHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHH-TTTTSSCSSSSCCEEEEEEE
T ss_pred HHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHH-HHhhcccccCCCceEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999 8876542 5789999999
Q ss_pred CCCch---------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceE
Q psy13563 159 GKDLR---------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQV 204 (577)
Q Consensus 159 Gggt~---------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~ 204 (577)
||||+ ||..+. ..+++.++..+++.+.+|+.+||++|+.||.....
T Consensus 222 GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~ 301 (404)
T 3i33_A 222 GGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQA 301 (404)
T ss_dssp CSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEE
T ss_pred CCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcce
Confidence 99998 788776 45678888889999999999999999999999999
Q ss_pred EEeeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCC
Q psy13563 205 KIEIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPS 284 (577)
Q Consensus 205 ~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~ 284 (577)
.+.++.+.++.++...|+|++|+++++|+++++..+|.++|+.+++...+|+.|+||||+|++|+|++.|++.|++.++.
T Consensus 302 ~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~ 381 (404)
T 3i33_A 302 SIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELN 381 (404)
T ss_dssp EEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCB
T ss_pred EEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCC
Confidence 99998888889999999999999999999999999999999999999999999999999999999999999999878888
Q ss_pred CCCCchhHHHhHHHHHHhhhhC
Q psy13563 285 RGVNPDEAVAYGAAVQAGVLSG 306 (577)
Q Consensus 285 ~~~~p~~aVa~GAa~~a~~ls~ 306 (577)
.+.||++|||.|||++|+++++
T Consensus 382 ~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 382 KSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp CSSCTTTHHHHHHHHHHHHHC-
T ss_pred CCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2e-49 Score=419.63 Aligned_cols=301 Identities=59% Similarity=0.895 Sum_probs=283.6
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCCCCCeeecHHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTSEGTKIFAPEEISAMV 81 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~peev~a~~ 81 (577)
++++++|..|+.++..+|.++++++||+||++++++.++...+.|||.++..+|.+.+.+.+. +..+.++|+++++++
T Consensus 60 ~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ei~a~~ 137 (394)
T 3qfu_A 60 DDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVK--GEKKVFTPEEISGMI 137 (394)
T ss_dssp SSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESS--SSEEEECHHHHHHHH
T ss_pred CCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeC--CCceEEcHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999998889999988876 667899999999999
Q ss_pred HHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 82 LGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 82 L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
|++|++.++.+++.++..+|||||++|++.||+++++|++.||++++.+++||+|||++ |++.....+.+++|||+|||
T Consensus 138 l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~-~~~~~~~~~~~vlV~D~Ggg 216 (394)
T 3qfu_A 138 LGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIA-YGLDKSDKEHQIIVYDLGGG 216 (394)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHH-TTTTSCSSCEEEEEEEECSS
T ss_pred HHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhccCCCCceEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 98877667889999999999
Q ss_pred ch---------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEEe
Q psy13563 162 LR---------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKIE 207 (577)
Q Consensus 162 t~---------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i~ 207 (577)
|+ ||..+. .++++.++..+++.+.+|+.+||++|+.||......+.
T Consensus 217 t~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~ 296 (394)
T 3qfu_A 217 TFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIE 296 (394)
T ss_dssp CEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEE
T ss_pred ceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEE
Confidence 98 887776 45678888889999999999999999999999999999
Q ss_pred eccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCC
Q psy13563 208 IESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGV 287 (577)
Q Consensus 208 i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~ 287 (577)
++.+.++.++...++|++|+++++++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.
T Consensus 297 ~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~ 376 (394)
T 3qfu_A 297 IDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGI 376 (394)
T ss_dssp EEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCS
T ss_pred EEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCc
Confidence 98888888999999999999999999999999999999999999999999999999999999999999999878888999
Q ss_pred CchhHHHhHHHHHHhhhh
Q psy13563 288 NPDEAVAYGAAVQAGVLS 305 (577)
Q Consensus 288 ~p~~aVa~GAa~~a~~ls 305 (577)
||++|||.|||++|++++
T Consensus 377 ~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 377 NPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp CTTTHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhhC
Confidence 999999999999998764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.6e-47 Score=407.17 Aligned_cols=303 Identities=29% Similarity=0.441 Sum_probs=266.9
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCC--CCCeeecHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTS--EGTKIFAPEEISA 79 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~--~~~~~~~peev~a 79 (577)
++++++|..|+.++.++|.++++++||+||+.++++.++.. .+++.+...+|.+.+.+..... +..+.++|++|++
T Consensus 55 ~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~ 132 (409)
T 4gni_A 55 DGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDPTHN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIAT 132 (409)
T ss_dssp TTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCCGGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHH
T ss_pred CCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhhhhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHH
Confidence 46789999999999999999999999999999988766554 4555666667777666654310 2468999999999
Q ss_pred HHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccc--cCCCcEEEEEe
Q psy13563 80 MVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTR--KKERRNVLVFD 157 (577)
Q Consensus 80 ~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~--~~~~~~vlV~D 157 (577)
++|++|++.|+.+++.++.++|||||++|++.||+++++|++.||++++.+++||+|||++ |.... ...+.++||||
T Consensus 133 ~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~-~~~~~~~~~~~~~vlv~D 211 (409)
T 4gni_A 133 RYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLA-YDARPEATISDKIIVVAD 211 (409)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHH-TTC------CCEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHH-HhcccccCCCCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999 88764 24678999999
Q ss_pred CCCCch---------------------------hHHHHH-------HHHhC--CCcccCHHHHHHHHHHHHHHhHHcCCC
Q psy13563 158 LGKDLR---------------------------KDKRTV-------QKLRR--KDLRKDKRTVQKLRREVEKAKRALSSN 201 (577)
Q Consensus 158 ~Gggt~---------------------------~D~~l~-------~~~~~--~~~~~~~~~~~~l~~~~e~~K~~LS~~ 201 (577)
+||||+ ||..+. ..+++ .+...+++.+.+|+.+||++|+.||..
T Consensus 212 ~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~ 291 (409)
T 4gni_A 212 LGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRS 291 (409)
T ss_dssp ECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCC
Confidence 999998 888877 34455 677788999999999999999999999
Q ss_pred ceEEEeeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCC
Q psy13563 202 FQVKIEIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNK 281 (577)
Q Consensus 202 ~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~ 281 (577)
..+.+.++.+.++.++..+|||++|+++++|+++++..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.|+..
T Consensus 292 ~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~ 371 (409)
T 4gni_A 292 TNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPES 371 (409)
T ss_dssp SEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTT
T ss_pred CceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCc
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999544
Q ss_pred -CC------CCCCCchhHHHhHHHHHHhhhhCC
Q psy13563 282 -EP------SRGVNPDEAVAYGAAVQAGVLSGE 307 (577)
Q Consensus 282 -~i------~~~~~p~~aVa~GAa~~a~~ls~~ 307 (577)
.+ ....||++|||+|||++|+.....
T Consensus 372 ~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 372 TRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp SEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred cccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 23 578899999999999999876654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.6e-46 Score=394.31 Aligned_cols=296 Identities=46% Similarity=0.675 Sum_probs=264.5
Q ss_pred CCcEEecHHHHHhHhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEe-cCCCceeEEeecCCCCCeeecHHHHHHH
Q psy13563 2 QGTRLIGDAAKNQLTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKE-KNSKPHIEVNTGTSEGTKIFAPEEISAM 80 (577)
Q Consensus 2 ~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~-~~~~~~~~v~~~~~~~~~~~~peev~a~ 80 (577)
+++++||..|+.+...+|.++++++||+||+.++++.++...+.+||.++. .+|...+.+ + ++.++|++++++
T Consensus 45 ~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~----g~~~~~~~i~~~ 118 (383)
T 1dkg_D 45 DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--K----GQKMAPPQISAE 118 (383)
T ss_dssp TSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEE--T----TEEECHHHHHHH
T ss_pred CCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEE--C----CEEEcHHHHHHH
Confidence 467899999999999999999999999999999999999888999999874 566655554 3 368999999999
Q ss_pred HHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCC
Q psy13563 81 VLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGK 160 (577)
Q Consensus 81 ~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gg 160 (577)
+|+++++.|+.+++.++..+|||||++|++.||+++++|++.||++++.+++||+|||++ |+......+.++||||+||
T Consensus 119 ~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~-~~~~~~~~~~~~lVvD~Gg 197 (383)
T 1dkg_D 119 VLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALA-YGLDKGTGNRTIAVYDLGG 197 (383)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHH-HTCCC-CCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHH-HHhccCCCCcEEEEEEcCC
Confidence 999999999999998999999999999999999999999999999999999999999999 8876544567999999999
Q ss_pred Cch-------------------------------hHHHHH-------HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCc
Q psy13563 161 DLR-------------------------------KDKRTV-------QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNF 202 (577)
Q Consensus 161 gt~-------------------------------~D~~l~-------~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~ 202 (577)
||+ ||+.+. ..+++.++..+++.+.+|+..||++|+.||...
T Consensus 198 gttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~ 277 (383)
T 1dkg_D 198 GTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ 277 (383)
T ss_dssp SCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCC
Confidence 998 777765 234577888889999999999999999999988
Q ss_pred eEEEeeccccC---C-CcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 203 QVKIEIESFFE---G-DDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 203 ~~~i~i~~~~~---~-~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
...+.++.+.+ | .++.++|||++|+++++|+++++...+.++|+.+++.+.+|+.|+|+||+|++|+|++.|++.|
T Consensus 278 ~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~ 357 (383)
T 1dkg_D 278 QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357 (383)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH
T ss_pred ceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh
Confidence 88887765443 2 4567799999999999999999999999999999998899999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhHHHHHHhhhh
Q psy13563 279 NNKEPSRGVNPDEAVAYGAAVQAGVLS 305 (577)
Q Consensus 279 ~~~~i~~~~~p~~aVa~GAa~~a~~ls 305 (577)
+.++..+.||++|||+|||++|++++
T Consensus 358 -~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 358 -GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp -SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred -CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 56788889999999999999998764
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=7.3e-38 Score=300.60 Aligned_cols=215 Identities=48% Similarity=0.751 Sum_probs=204.3
Q ss_pred EEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCC
Q psy13563 314 VLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGV 393 (577)
Q Consensus 314 ~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~ 393 (577)
++.|++|+|+|+++.+|.|.+|||+|++||++++..|++..|+|+.+.|.||||++.++.+|..||+|.|.|+|++|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhh
Q psy13563 394 PQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFAD 473 (577)
Q Consensus 394 ~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~ 473 (577)
++|+|+|.+|.||+|+|++.++.+|++..++|. +. .+||++++++++++++.+..
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~------------------------~~-~~Ls~eeI~~m~~~a~~~~~ 136 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIK------------------------AS-SGLNEDEIQKMVRDAEANAE 136 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEEC------------------------TT-CSCCHHHHHHHHHHHHHTHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeee------------------------cc-ccccHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999998 43 56999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy13563 474 DDKKLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPI 553 (577)
Q Consensus 474 ~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i 553 (577)
+|+..+++.++||.||+|+|++++.|.+ +...+++++|+.|...++++++||+++ +.++|+.++++|++.+.||
T Consensus 137 eD~~~r~~~e~kn~le~~i~~~~~~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i 210 (219)
T 4e81_A 137 ADRKFEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKL 210 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 457899999999999999999999987 7899999999999999999
Q ss_pred HHHHHh
Q psy13563 554 IAKLYQ 559 (577)
Q Consensus 554 ~~r~~e 559 (577)
..|+++
T Consensus 211 ~~~~~~ 216 (219)
T 4e81_A 211 MEIAQQ 216 (219)
T ss_dssp HHHC--
T ss_pred HHHHhc
Confidence 999876
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=3.3e-35 Score=284.91 Aligned_cols=215 Identities=34% Similarity=0.547 Sum_probs=202.5
Q ss_pred eeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCCe
Q psy13563 316 LDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQ 395 (577)
Q Consensus 316 ~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~~ 395 (577)
.|++|++||+++.+|.+.+|||+|++||++++..|++..|+|+.+.|.||||++.++.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhhh
Q psy13563 396 IEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADDD 475 (577)
Q Consensus 396 i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~D 475 (577)
|+|+|.+|.||+|+|++.+..+|++..++|. +. .+||+++++++++++..+..+|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~------------------------~~-~~Ls~eei~~~~~~~~~~~~~D 135 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVK------------------------PS-YGLTDSEIASMIKDSMSYAEQD 135 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEEC------------------------CC-SCCCHHHHHHHHHHHHHTHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEE------------------------ec-cCCCHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999999999888887 44 5699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy13563 476 KKLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIA 555 (577)
Q Consensus 476 ~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~ 555 (577)
+..+++.+++|.||+|+|.+|+.|.+ +..++++++|+.+...++++++||+++ +.++|+.++++|++++.||..
T Consensus 136 ~~~~e~~e~kn~le~~i~~~~~~l~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~ 209 (227)
T 1u00_A 136 VKARMLAEQKVEAARVLESLHGALAA---DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAA 209 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999976 457899999999999999999999854 589999999999999999999
Q ss_pred HHHhcc
Q psy13563 556 KLYQGA 561 (577)
Q Consensus 556 r~~e~~ 561 (577)
|++...
T Consensus 210 r~~~~~ 215 (227)
T 1u00_A 210 RRMDQS 215 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876544
No 12
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=245.79 Aligned_cols=163 Identities=60% Similarity=0.930 Sum_probs=153.1
Q ss_pred cEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCC
Q psy13563 312 AIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPR 391 (577)
Q Consensus 312 ~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~ 391 (577)
.+.+.|++|+|||+++.+|.|.+|||+|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.++|++|+
T Consensus 19 ~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p~ 98 (182)
T 3n8e_A 19 YFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPR 98 (182)
T ss_dssp -----CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCT
T ss_pred CEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHH
Q psy13563 392 GVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKF 471 (577)
Q Consensus 392 g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~ 471 (577)
|.++|+|+|.+|.||+|+|++.++.+|++.+++|. +. ..||++++++++++++++
T Consensus 99 G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~------------------------~~-~~Ls~eei~~mi~~a~~~ 153 (182)
T 3n8e_A 99 GVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQ------------------------SS-GGLSKDDIENMVKNAEKY 153 (182)
T ss_dssp TCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEES------------------------CC-CCCCHHHHHHHHHHHHHS
T ss_pred CCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEe------------------------cC-ccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 55 789999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13563 472 ADDDKKLKERVEARNELESYAYSLKNQL 499 (577)
Q Consensus 472 ~~~D~~~~~~~~a~N~lE~~i~~~r~~l 499 (577)
..+|++.+++.++||.||+|+|.+|+.|
T Consensus 154 ~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 154 AEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988654
No 13
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=5.7e-31 Score=273.10 Aligned_cols=218 Identities=21% Similarity=0.232 Sum_probs=177.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcE
Q psy13563 73 APEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRN 152 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~ 152 (577)
.++++++++|++++..+ .++ ...+|||||++|++.||+++++|++.||++++.+++||+|||++ |+.... .+.+
T Consensus 75 ~~~~i~~~~l~~~~~~~--~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~-~~~~~~-~~~~ 148 (344)
T 1jce_A 75 VALVMLRYFINKAKGGM--NLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIG-SNLNVE-EPSG 148 (344)
T ss_dssp HHHHHHHHHHHHHHTSC--CSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHH-TTCCTT-SSSC
T ss_pred HHHHHHHHHHHHHhhcc--ccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHh-cCCCCC-CCce
Confidence 46777788777765431 233 47899999999999999999999999999999999999999998 876543 5678
Q ss_pred EEEEeCCCCch----------------------hHHHHH---HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCce----
Q psy13563 153 VLVFDLGKDLR----------------------KDKRTV---QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQ---- 203 (577)
Q Consensus 153 vlV~D~Gggt~----------------------~D~~l~---~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~---- 203 (577)
++|||+||||+ ||+.|. .++++.++. ...||++|+.|+....
T Consensus 149 ~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~---------~~~ae~~K~~l~~~~~~~~~ 219 (344)
T 1jce_A 149 NMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIG---------ERTAERVKIEIGNVFPSKEN 219 (344)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHHHHHCEECC---------HHHHHHHHHHHCBCSCCHHH
T ss_pred EEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHHHHHHHHHHhCcccC---------HHHHHHHHHHHhccCccccC
Confidence 99999999998 777776 344554332 4689999999987642
Q ss_pred --EEEeec--cccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCC-CeEEEEeCCcCcHHHHHHHHh
Q psy13563 204 --VKIEIE--SFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMN--KKDV-DEIVLVGGSTRIPKVQQLVKE 276 (577)
Q Consensus 204 --~~i~i~--~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~--~~~i-~~V~lvGGssrip~v~~~l~~ 276 (577)
..+.+. .+.++.+..++|+|++|+++++|.++++.+.|.++|+.++.. .+.+ +.|+|+||+|++|.|++.|++
T Consensus 220 ~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~ 299 (344)
T 1jce_A 220 DELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQK 299 (344)
T ss_dssp HHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHH
T ss_pred CcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHH
Confidence 234332 344566778999999999999999999999999999987532 2234 699999999999999999999
Q ss_pred HhCCCCCCCCCCchhHHHhHHHHHHhhhhC
Q psy13563 277 FFNNKEPSRGVNPDEAVAYGAAVQAGVLSG 306 (577)
Q Consensus 277 ~f~~~~i~~~~~p~~aVa~GAa~~a~~ls~ 306 (577)
.| +.++....||++|||+||+++++.++.
T Consensus 300 ~~-~~~v~~~~~p~~ava~Gaa~~a~~~~~ 328 (344)
T 1jce_A 300 ET-GISVIRSEEPLTAVAKGAGMVLDKVNI 328 (344)
T ss_dssp HH-SSCEEECSSTTTHHHHHHHHGGGCHHH
T ss_pred HH-CCCccccCChHHHHHHHHHHHHhChHH
Confidence 99 566777889999999999999986553
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.96 E-value=7.8e-29 Score=224.27 Aligned_cols=151 Identities=73% Similarity=1.085 Sum_probs=145.2
Q ss_pred EeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCC
Q psy13563 315 LLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVP 394 (577)
Q Consensus 315 ~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~ 394 (577)
+.|++|+|+|+++.+|.|.+|||+|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhh
Q psy13563 395 QIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADD 474 (577)
Q Consensus 395 ~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~ 474 (577)
+|+|+|.+|.||+|+|++.+..+|++..++|. +....||+++++++++++++|..+
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~------------------------~~~~~ls~~ei~~~~~~a~~~~~~ 137 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITIT------------------------NDKGRLTQEEIDRMVEEAEKFASE 137 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEE------------------------CCTTCCCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEe------------------------cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998 666789999999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q psy13563 475 DKKLKERVEARNELE 489 (577)
Q Consensus 475 D~~~~~~~~a~N~lE 489 (577)
|+..+++.++||.||
T Consensus 138 D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 138 DASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHCSCCCC
T ss_pred hHHHHHHHHHHhhcC
Confidence 999999999999875
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.96 E-value=5.6e-29 Score=224.82 Aligned_cols=151 Identities=66% Similarity=1.019 Sum_probs=140.8
Q ss_pred EeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCC
Q psy13563 315 LLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVP 394 (577)
Q Consensus 315 ~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~ 394 (577)
+.|++|+|||+++.+|.|.+|||+|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhh
Q psy13563 395 QIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADD 474 (577)
Q Consensus 395 ~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~ 474 (577)
+|+|+|.+|.||+|+|++.++.+|++.+++|. +....||++++++++++++.+..+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~------------------------~~~~~Ls~~ei~~~~~~a~~~~~~ 137 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQ------------------------NEKGRLTQSDIDRMVHEAKQFEKE 137 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEEC------------------------CC----CHHHHHHHHHHHHHTHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEE------------------------cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998 666779999999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q psy13563 475 DKKLKERVEARNELE 489 (577)
Q Consensus 475 D~~~~~~~~a~N~lE 489 (577)
|++.+++.++||.||
T Consensus 138 D~~~~~~~~~~n~le 152 (152)
T 3dob_A 138 DGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHTCCCCSEEC
T ss_pred hHHHHHHHHHHhhcC
Confidence 999999999999875
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.95 E-value=9.1e-29 Score=223.17 Aligned_cols=150 Identities=63% Similarity=0.963 Sum_probs=142.4
Q ss_pred EeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCC
Q psy13563 315 LLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVP 394 (577)
Q Consensus 315 ~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~ 394 (577)
+.|++|+|+|+++.+|.|.+|||+|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.++|++|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhh
Q psy13563 395 QIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADD 474 (577)
Q Consensus 395 ~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~ 474 (577)
+|+|+|.+|.||+|+|++.++.+|++..++|. +. ..||++++++++++++.+..+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~------------------------~~-~~Ls~~ei~~~~~~a~~~~~~ 136 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQ------------------------SS-GGLSKDQIENMIKEAEKNAAE 136 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEE------------------------CS-SSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEe------------------------cC-CCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 55 789999999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q psy13563 475 DKKLKERVEARNELE 489 (577)
Q Consensus 475 D~~~~~~~~a~N~lE 489 (577)
|++.+++.++||.||
T Consensus 137 D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 137 DAKRKELVEVINQAE 151 (151)
T ss_dssp HTTCCCEEECBCCCC
T ss_pred hHHHHHHHHHHhhcC
Confidence 999998888888764
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.94 E-value=7.9e-27 Score=212.25 Aligned_cols=151 Identities=78% Similarity=1.169 Sum_probs=143.5
Q ss_pred EeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCCCCCCC
Q psy13563 315 LLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVP 394 (577)
Q Consensus 315 ~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~~~g~~ 394 (577)
+.|++|++||+++.+|.|.+||++|++||++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.++|++|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeccCCceeeEEEecCCCCCCCCCCCCCCCcceeeeeecCCCCCCHHHHHHHHHHHHHHhhh
Q psy13563 395 QIEVTFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPDDIDKGTGNKEKIVITNDQNRLTPDDIDRMIKDAEKFADD 474 (577)
Q Consensus 395 ~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~e~i~~~~~~~~~~~~~ 474 (577)
+|+|+|.+|.||+|+|++.+..+|++..++|. +....||+++++++++++.+|..+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~------------------------~~~~~ls~eei~~~~~~~~~~~~~ 137 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTIT------------------------NDHNRLSPEDIERMINDADKFAAD 137 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEEC------------------------SSSSCCCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEee------------------------ccccCCCHHHHHHHHHHHHHhHhc
Confidence 99999999999999999999999999988887 555679999999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q psy13563 475 DKKLKERVEARNELE 489 (577)
Q Consensus 475 D~~~~~~~~a~N~lE 489 (577)
|+..+++.++||.||
T Consensus 138 d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 138 DQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHSCCCSEEC
T ss_pred cHHHHHHHHHHhhcC
Confidence 999999999999875
No 18
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.85 E-value=2.2e-21 Score=171.75 Aligned_cols=117 Identities=62% Similarity=0.974 Sum_probs=107.9
Q ss_pred CccEEEeeeccceeeEEEeCCEEEEEecCCCCCCceeEEEEEcccCCCceEEEEEEecCCCCccCCceeeEEEEeCCCCC
Q psy13563 310 TDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQNTVTIQVYEGERPMTKDNHLLGKFDLTGIPPA 389 (577)
Q Consensus 310 ~~~~~~~d~~~~sigi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~l~~~~~~ 389 (577)
.+++.+.|++|++||+++.+|.|.+||++|+++|++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.++|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCCccEEEEeeeccCCceeeEEEe
Q psy13563 390 PRGVPQIEVTFEIDANGILQVSAEDKGTGNKEKIVIT 426 (577)
Q Consensus 390 ~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~~~~~ 426 (577)
|+|.++|+++|++|.||+|+|++.++.+|++.+++|+
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~ 130 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 130 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEe
Confidence 9999999999999999999999999999999999998
No 19
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.85 E-value=2.8e-21 Score=193.36 Aligned_cols=181 Identities=15% Similarity=0.178 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEE
Q psy13563 75 EEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVL 154 (577)
Q Consensus 75 eev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vl 154 (577)
-+....+|+++++.++.+.+..+..+++|+|++|...+|++++.+++.+|+++..++.||+|++++ |+.. ..+
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~-~~~~------~~~ 142 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARA-LGIN------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHH-HTCS------SEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHH-HcCC------CEE
Confidence 367889999999999998888889999999999999999999999999999999999999999987 7653 259
Q ss_pred EEeCCCCch----------------------hHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEEeecccc
Q psy13563 155 VFDLGKDLR----------------------KDKRTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKIEIESFF 212 (577)
Q Consensus 155 V~D~Gggt~----------------------~D~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i~i~~~~ 212 (577)
|+|+||||+ |+..+... .+. -...++++|+.++
T Consensus 143 viDiGggst~~~~~~~g~~~~~~~~~~Gg~~~~~~l~~~-l~~-----------~~~~ae~~k~~~~------------- 197 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIEKGKITATFDEPTGGTHLSLVLAGS-YKI-----------PFEEAETIKKDFS------------- 197 (272)
T ss_dssp EEEECSSCEEEEEEETTEEEEECCBSCCHHHHHHHHHHH-HTC-----------CHHHHHHHHHSST-------------
T ss_pred EEEECCCcEEEEEEECCEEEEEecCCCcHHHHHHHHHHH-hCC-----------CHHHHHHHHHhcC-------------
Confidence 999999998 33333211 111 1357888998876
Q ss_pred CCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhH
Q psy13563 213 EGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEA 292 (577)
Q Consensus 213 ~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~a 292 (577)
++.++++++.+.++++...+.+.++..+ +++.|+|+||+|++|.+++.+++.| +.++..+.+|+++
T Consensus 198 ---------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a 263 (272)
T 3h1q_A 198 ---------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLV 263 (272)
T ss_dssp ---------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGH
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHH
Confidence 6899999999999999999999988764 4789999999999999999999999 6788888999999
Q ss_pred HHhHHHHHH
Q psy13563 293 VAYGAAVQA 301 (577)
Q Consensus 293 Va~GAa~~a 301 (577)
+|+|||++|
T Consensus 264 ~a~Gaal~a 272 (272)
T 3h1q_A 264 TPLGIALFG 272 (272)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 999999865
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.82 E-value=4.6e-20 Score=193.36 Aligned_cols=255 Identities=14% Similarity=0.106 Sum_probs=166.2
Q ss_pred HhhCccchhhhhHhhcCCCCCChhhHhhhccCceeEEecCCCceeEEeecCCCCCeeecHHHHHHHHHHHHHHHHHHHhC
Q psy13563 15 LTTNPENTVYDAKRLIGRDWTDATVQSDIKHFSFNVKEKNSKPHIEVNTGTSEGTKIFAPEEISAMVLGKMKETAEAYLG 94 (577)
Q Consensus 15 ~~~~p~~ti~~~KrllG~~~~~~~v~~~~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~peev~a~~L~~l~~~ae~~~~ 94 (577)
...+|..+...+|+++++.- . ....-.+.-.|...+...+. ...++++++... ++..++++++
T Consensus 54 ~i~d~~~~~~~ik~~~~~~~--------~-~~~~v~~~i~~~~~~~~~~~----~~~v~~~el~~~----i~~ea~~~~~ 116 (377)
T 2ych_A 54 MVAEPAALAQEIKELLLEAR--------T-RKRYVVTALSNLAVILRPIQ----VPKMPLKEMEEA----VRWEAERYIP 116 (377)
T ss_dssp EESCHHHHHHHHHHHHHHHT--------C-CCCEEEEEECGGGCEEEEEE----EECCCHHHHHHH----HHHHHGGGCS
T ss_pred CcCCHHHHHHHHHHHHHHcC--------C-CcceEEEEecCCcEEEEEEE----CCCCCHHHHHHH----HHHHHhhcCC
Confidence 44678889999999998610 0 00101122233332222222 145788887654 3446778899
Q ss_pred CccccEEEEeCCCCCHHH--------------------HHHHHHHHHHcCCceeccccCcceeeeeccccccc-CCCcEE
Q psy13563 95 KKVTHAVVTVPAYFNDAQ--------------------RQATKDAGVIARTHRDENINEATGRGPSLMDWTRK-KERRNV 153 (577)
Q Consensus 95 ~~~~~~VitVPa~f~~~q--------------------r~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~-~~~~~v 153 (577)
.++.++||++| +.+.+ .+++++|++.||+++..++.||+|||.+ |+.... ..+..+
T Consensus 117 ~~~~~~vid~~--~~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~-~~~~~~~~~~~~~ 193 (377)
T 2ych_A 117 FPIDEVVLDFA--PLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYP-LEARLAEEPDRVF 193 (377)
T ss_dssp SCC-CEEEEEE--ESSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGG-GHHHHHTSTTCEE
T ss_pred CChhHceEEEE--EeCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHH-HHhhcccccCCeE
Confidence 99999999998 33333 3889999999999999999999999998 764322 345679
Q ss_pred EEEeCCCCch----------------------hHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEEeeccc
Q psy13563 154 LVFDLGKDLR----------------------KDKRTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKIEIESF 211 (577)
Q Consensus 154 lV~D~Gggt~----------------------~D~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i~i~~~ 211 (577)
+|+|+||||+ ||+.+.. .++.+ +..||++|+.++............
T Consensus 194 ~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~~-~~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~ 261 (377)
T 2ych_A 194 LVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIAR-SFNLD-----------LLAAEEVKRTYGMATLPTEDEELL 261 (377)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHH-HTTCC-----------HHHHHHHHHHTC------------
T ss_pred EEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHHH-HhCCC-----------HHHHHHHHhhcccccccccccccc
Confidence 9999999998 6666653 33332 468999999998643221110000
Q ss_pred cCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCC---
Q psy13563 212 FEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLED--ADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRG--- 286 (577)
Q Consensus 212 ~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~--~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~--- 286 (577)
..-......++|++|++++++.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.| +.++...
T Consensus 262 i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~~P~ 340 (377)
T 2ych_A 262 LDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPW 340 (377)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEECCGG
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEecCch
Confidence 111123458999999999999999999999999995 3566678999999999999999999999999 4432221
Q ss_pred -----------------CCchhHHHhHHHHHHh
Q psy13563 287 -----------------VNPDEAVAYGAAVQAG 302 (577)
Q Consensus 287 -----------------~~p~~aVa~GAa~~a~ 302 (577)
.+|..++|.|+|+++.
T Consensus 341 ~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 341 EAVAVDPKRFESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp GGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCcccCCHHHHHhhhHHHHHHHHHHHcCC
Confidence 1355678889998773
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.79 E-value=7.8e-20 Score=189.06 Aligned_cols=199 Identities=14% Similarity=0.086 Sum_probs=142.4
Q ss_pred eeecHHHHHHHHHHHHHHHHHHHhCCccccEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeccccC
Q psy13563 70 KIFAPEEISAMVLGKMKETAEAYLGKKVTHAV--VTVPAYFNDAQRQATKDAGVIA--------R------THRDENINE 133 (577)
Q Consensus 70 ~~~~peev~a~~L~~l~~~ae~~~~~~~~~~V--itVPa~f~~~qr~a~~~Aa~~A--------G------l~~~~li~E 133 (577)
..+++++..++++..|++.++...+.+ .++| |+||++|++.||+++++|+..+ | +..+.+++|
T Consensus 93 ~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~E 171 (346)
T 2fsj_A 93 GRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQ 171 (346)
T ss_dssp TCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEET
T ss_pred CcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEcc
Confidence 445678888888888887653333334 4699 9999999999999999998776 4 355889999
Q ss_pred cceeeeecccccc---cCCCcEEEEEeCCCCch--------------------------hHHHHH---HHHhCC--Cccc
Q psy13563 134 ATGRGPSLMDWTR---KKERRNVLVFDLGKDLR--------------------------KDKRTV---QKLRRK--DLRK 179 (577)
Q Consensus 134 p~AAa~~~y~~~~---~~~~~~vlV~D~Gggt~--------------------------~D~~l~---~~~~~~--~~~~ 179 (577)
|+|||++ | +.. .+...+++|+|+||||+ |++.+. +++++. ++.
T Consensus 172 p~AAa~~-~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~~i~- 248 (346)
T 2fsj_A 172 GVGAALY-L-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVPFD- 248 (346)
T ss_dssp THHHHHH-H-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHHCCCCCHH-
T ss_pred HHHHHHH-h-hccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHhCCCcCCC-
Confidence 9999998 6 221 12347899999999999 222222 233333 211
Q ss_pred CHHHHHHHHHHHHHHhHHcCCCceEEEeeccccCCCcceEeeeHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeE
Q psy13563 180 DKRTVQKLRREVEKAKRALSSNFQVKIEIESFFEGDDFSETLTRAKF-EELNMDLFRATMKPVQKVLEDADMNKKDVDEI 258 (577)
Q Consensus 180 ~~~~~~~l~~~~e~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~~f-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V 258 (577)
...+| .. ..+.+ .+. .++++++ +++++++++++.+.|+++|+++ .++++.|
T Consensus 249 --------~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~I 300 (346)
T 2fsj_A 249 --------LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSL 300 (346)
T ss_dssp --------HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEE
T ss_pred --------HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEE
Confidence 00111 01 11222 222 3568999 9999999999999999999876 5578999
Q ss_pred EEEeCCcCcHHHHHHHHhHhCCCCC-CCCCCchhHHHhHHHHHHh
Q psy13563 259 VLVGGSTRIPKVQQLVKEFFNNKEP-SRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 259 ~lvGGssrip~v~~~l~~~f~~~~i-~~~~~p~~aVa~GAa~~a~ 302 (577)
+|+||+|++ +++.|++.|+...+ ....||++|+|.|+..++.
T Consensus 301 vL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 301 IPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999 99999999953222 1256999999999998764
No 22
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.79 E-value=3.3e-19 Score=188.51 Aligned_cols=217 Identities=16% Similarity=0.170 Sum_probs=166.8
Q ss_pred CeeecHHHHHHHHHHHHHHHHHHHhCCcccc-EEEEeCCC------------CCH-------------------------
Q psy13563 69 TKIFAPEEISAMVLGKMKETAEAYLGKKVTH-AVVTVPAY------------FND------------------------- 110 (577)
Q Consensus 69 ~~~~~peev~a~~L~~l~~~ae~~~~~~~~~-~VitVPa~------------f~~------------------------- 110 (577)
+.....+.+ +..++.+++.|+...|.+++. +++++|.. ...
T Consensus 48 G~I~di~~~-~~~I~~av~~ae~~~g~~i~~~v~v~i~g~~~~i~s~~~~~~i~~~~~~i~~~di~~~i~~a~~~~~p~d 126 (419)
T 4a2a_A 48 GEIKDAIAF-KESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALEKLKENG 126 (419)
T ss_dssp TEESBHHHH-HHHHHHHHHHHHHHHTSCCCSEEEEEECCTTCEEEEEEEEEECCSSCEECCHHHHHHHHHHHHHHHSCTT
T ss_pred CEEEcHHHH-HHHHHHHHHHHHHHcCCCcCceEEEEEcCCcCeEEEEEeEEEEeCCCCEECHHHHHHHHHHhhhhcCCCC
Confidence 345555555 688899999999999999999 99999998 210
Q ss_pred -----------------------------------------HHHHHHHHHHHHcCCceeccccCcceeeeecccccccCC
Q psy13563 111 -----------------------------------------AQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKE 149 (577)
Q Consensus 111 -----------------------------------------~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~ 149 (577)
..-+.+.+|++.|||++..++.||+|||++ |... ...
T Consensus 127 ~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v~~~~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a-~l~~-~~~ 204 (419)
T 4a2a_A 127 KTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEG-VLTT-PEK 204 (419)
T ss_dssp EEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEEEEEHHHHHHHHHHHHTTSCSCEEEEEHHHHHHHH-HCCH-HHH
T ss_pred CEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEEEEeHHHHHHHHHHHHHcCCcEEEEEEHHHHHHHH-hhcc-ccc
Confidence 122458999999999999999999999987 6433 234
Q ss_pred CcEEEEEeCCCCch----------------------hHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCC-----c
Q psy13563 150 RRNVLVFDLGKDLR----------------------KDKRTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSN-----F 202 (577)
Q Consensus 150 ~~~vlV~D~Gggt~----------------------~D~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~-----~ 202 (577)
+..++|+|+||||+ ||+.|.. .++ .....||++|+.++.. .
T Consensus 205 ~~gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dIa~-~l~-----------~~~~~AE~iK~~~g~a~~~~~~ 272 (419)
T 4a2a_A 205 DRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSA-VLD-----------TSFEESERLIITHGNAVYNDLK 272 (419)
T ss_dssp HHCEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHHHH-HHT-----------CCHHHHHHHHHHHCCSCCTTCC
T ss_pred cCCEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHHHH-HHC-----------CCHHHHHHHHHHhccCcccCCC
Confidence 56899999999999 5555532 122 2247999999998742 3
Q ss_pred eEEEeeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CcCCCCeEEEEeCCcCcHHHHHHHHh
Q psy13563 203 QVKIEIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADM------NKKDVDEIVLVGGSTRIPKVQQLVKE 276 (577)
Q Consensus 203 ~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~------~~~~i~~V~lvGGssrip~v~~~l~~ 276 (577)
...+.++... .....+++|++|.++++|.++++...|.+.|+.++. ....+++|+|+||+|++|.|++.+++
T Consensus 273 ~~~i~v~~~~--~~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~ 350 (419)
T 4a2a_A 273 EEEIQYRGLD--GNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATE 350 (419)
T ss_dssp CCEEEEECTT--SCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHH
T ss_pred CceEEEeecC--CccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHH
Confidence 4456666443 346789999999999999999999999999999998 34568999999999999999999999
Q ss_pred HhCCCCCC--C-----C----------CCchhHHHhHHHHHHhh
Q psy13563 277 FFNNKEPS--R-----G----------VNPDEAVAYGAAVQAGV 303 (577)
Q Consensus 277 ~f~~~~i~--~-----~----------~~p~~aVa~GAa~~a~~ 303 (577)
.| +.++. . + -+|..++|.|.++++..
T Consensus 351 ~~-g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 351 VF-KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp HH-TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred HH-CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 99 44432 1 1 38999999999998854
No 23
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.68 E-value=8e-17 Score=171.04 Aligned_cols=201 Identities=15% Similarity=0.080 Sum_probs=141.8
Q ss_pred cccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeccccCcceeeeeccccccc-CCCcEEEEEeCCCCch-----------
Q psy13563 97 VTHAVVTVPAYFNDAQRQATKDAG-VIARTHRDENINEATGRGPSLMDWTRK-KERRNVLVFDLGKDLR----------- 163 (577)
Q Consensus 97 ~~~~VitVPa~f~~~qr~a~~~Aa-~~AGl~~~~li~Ep~AAa~~~y~~~~~-~~~~~vlV~D~Gggt~----------- 163 (577)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++.|..... ..+.+.+|+|+||||+
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEETTEEC
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeECCEEc
Confidence 457999999999999999999999 889999999999999998652321110 1122679999999998
Q ss_pred -------------hHHHHHHHH--hCCCcccCHHHHHHHHHHHHHHhHHcCCCc-----------------eEEEeeccc
Q psy13563 164 -------------KDKRTVQKL--RRKDLRKDKRTVQKLRREVEKAKRALSSNF-----------------QVKIEIESF 211 (577)
Q Consensus 164 -------------~D~~l~~~~--~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~-----------------~~~i~i~~~ 211 (577)
+|+.|.... .+..+... .-...+|++|+.++... ...+.+++.
T Consensus 187 ~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~ 261 (418)
T 1k8k_A 187 GSCIKHIPIAGRDITYFIQQLLRDREVGIPPE-----QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINA 261 (418)
T ss_dssp GGGCEEESCSHHHHHHHHHHHHHTTCCCCCGG-----GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECT
T ss_pred ccceEEEeCcHHHHHHHHHHHHHhcCCCCCCH-----HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCC
Confidence 666665211 11122110 11256788888876432 134555544
Q ss_pred cCCCcceEeeeHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCcCCCCeEEEEeCCcCcHHHHHHHHhHhCC
Q psy13563 212 FEGDDFSETLTRAKF---EELNMDLF------RATMKPVQKVLEDAD--MNKKDVDEIVLVGGSTRIPKVQQLVKEFFNN 280 (577)
Q Consensus 212 ~~~~~~~~~itr~~f---e~~~~~~~------~~~~~~i~~~l~~~~--~~~~~i~~V~lvGGssrip~v~~~l~~~f~~ 280 (577)
..+....++++++.| |.++.|.+ ..+.+.|.++|..+. +....++.|+|+||+|++|.+++.|++.++.
T Consensus 262 ~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~ 341 (418)
T 1k8k_A 262 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 341 (418)
T ss_dssp TTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred CCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHH
Confidence 445566889999998 44544432 568888999998765 3345578999999999999999999876622
Q ss_pred C-----------------------CCCCCCCchhHHHhHHHHHHh
Q psy13563 281 K-----------------------EPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 281 ~-----------------------~i~~~~~p~~aVa~GAa~~a~ 302 (577)
. ++..+.+|..++.+||+++|.
T Consensus 342 ~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 342 TVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred hhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 1 122345778999999999996
No 24
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.67 E-value=5.7e-17 Score=169.65 Aligned_cols=188 Identities=15% Similarity=0.101 Sum_probs=131.7
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCCch-------------
Q psy13563 98 THAVVTVPAYFNDAQRQATKDAG-VIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR------------- 163 (577)
Q Consensus 98 ~~~VitVPa~f~~~qr~a~~~Aa-~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~------------- 163 (577)
..+|||+|++++..+|+++.+++ +.+|++.+.+++||+|||++ |+. .+.+|+|+||||+
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a-~g~------~~~lVvDiG~gtt~v~~v~~G~~~~~ 173 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA-SGR------TTGIVLDSGDGVTHNVPIYEGYALPH 173 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHH-TTC------SSEEEEEECSSCEEEEEEETTEECGG
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeee-cCC------CeEEEEEcCCCceEEeEeECCEEecc
Confidence 45999999999999999888765 77899999999999999988 775 3679999999998
Q ss_pred -----------hHHHHH--HHHhCCCcccCHHHHHHHHHHHHHHhHHcC----------------CCceEEEeeccccCC
Q psy13563 164 -----------KDKRTV--QKLRRKDLRKDKRTVQKLRREVEKAKRALS----------------SNFQVKIEIESFFEG 214 (577)
Q Consensus 164 -----------~D~~l~--~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS----------------~~~~~~i~i~~~~~~ 214 (577)
+|+.|. ....+..+.. . .-...++++|+.++ ......+.++ ++
T Consensus 174 ~~~~~~~GG~~lt~~l~~~l~~~~~~~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg 245 (375)
T 2fxu_A 174 AIMRLDLAGRDLTDYLMKILTERGYSFVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG 245 (375)
T ss_dssp GCEEESCCHHHHHHHHHHHHHHHTCCCCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS
T ss_pred ceEEeccCHHHHHHHHHHHHHhcCCCCCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC
Confidence 666665 1111222211 0 01134455555543 2223344443 22
Q ss_pred CcceEeeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHcC--CCcCCCCeEEEEeCCcCcHHHHHHHHhHhCC----
Q psy13563 215 DDFSETLTRAKFE---ELNMDL-----FRATMKPVQKVLEDAD--MNKKDVDEIVLVGGSTRIPKVQQLVKEFFNN---- 280 (577)
Q Consensus 215 ~~~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~--~~~~~i~~V~lvGGssrip~v~~~l~~~f~~---- 280 (577)
..++++++.|. .++.|. ...+.+.|.++|..+. +....++.|+|+||+|++|.++++|++.++.
T Consensus 246 --~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~ 323 (375)
T 2fxu_A 246 --QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS 323 (375)
T ss_dssp --CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCT
T ss_pred --CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCC
Confidence 35678888773 333442 2457778888887653 2234468899999999999999999998732
Q ss_pred ---CCCCCCCCchhHHHhHHHHHHh
Q psy13563 281 ---KEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 281 ---~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
.++....+|..+++.||+++|.
T Consensus 324 ~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 324 TMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp TCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CeeEEEEcCCCCCccEEcchHHhhC
Confidence 2334567899999999999997
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.47 E-value=4.1e-14 Score=144.64 Aligned_cols=203 Identities=14% Similarity=0.125 Sum_probs=127.0
Q ss_pred CCeeecHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCC-CCHH--HH--HHH--------HHH----HHHcCCceecc
Q psy13563 68 GTKIFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAY-FNDA--QR--QAT--------KDA----GVIARTHRDEN 130 (577)
Q Consensus 68 ~~~~~~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~-f~~~--qr--~a~--------~~A----a~~AGl~~~~l 130 (577)
....+++..+++.+ ..|+. +. ..+.++ .+|+++|+. |... || .++ +.+ ++.+++..+.+
T Consensus 70 ~~~~~~~~~l~~i~-~aL~~-~~-~~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~ 145 (320)
T 2zgy_A 70 IAWQYSDVNVVAVH-HALLT-SG-LPVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKV 145 (320)
T ss_dssp SGGGGSHHHHHHHH-HHHHH-HS-CCSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEE
T ss_pred CCccchHHHHHHHH-HHHHH-cC-CCCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEE
Confidence 34578888887754 55543 21 123334 699999987 6531 22 111 111 34556778899
Q ss_pred ccCcceeeeecccccccCCCcEEEEEeCCCCch-------------------------hHHHHHHHHh--CCCcccCHHH
Q psy13563 131 INEATGRGPSLMDWTRKKERRNVLVFDLGKDLR-------------------------KDKRTVQKLR--RKDLRKDKRT 183 (577)
Q Consensus 131 i~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~-------------------------~D~~l~~~~~--~~~~~~~~~~ 183 (577)
++||.||+++ |.. ....+..++|+|+||||+ ||+.+..... +.++ +
T Consensus 146 ~~e~~aa~~~-~~~-~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i--~--- 218 (320)
T 2zgy_A 146 MPESIPAGYE-VLQ-ELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKG--S--- 218 (320)
T ss_dssp EESSHHHHHH-HHH-HSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGG--G---
T ss_pred ecCcHHHHHh-hhc-cccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCCC--C---
Confidence 9999999987 652 223467999999999998 5555542211 2111 1
Q ss_pred HHHHHHHHHHH-hHHcCCCceEEEeeccccCCCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEe
Q psy13563 184 VQKLRREVEKA-KRALSSNFQVKIEIESFFEGDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVG 262 (577)
Q Consensus 184 ~~~l~~~~e~~-K~~LS~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvG 262 (577)
...+|++ |..- . . .+....+...-+++++.+++++.++.+.+.|.+.+++. .+++.|+|+|
T Consensus 219 ----~~~ae~~lk~~~---~------~-~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~G 280 (320)
T 2zgy_A 219 ----SYLADDIIIHRK---D------N-NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIG 280 (320)
T ss_dssp ----HHHHHHHHHTTT---C------H-HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEES
T ss_pred ----HHHHHHHHHHhh---h------h-hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEEC
Confidence 1234444 3320 0 0 00000000111345666777777777777777776652 5789999999
Q ss_pred CCcCcHHHHHHHHhHhCCC--CCCCCCCchhHHHhHHHHHH
Q psy13563 263 GSTRIPKVQQLVKEFFNNK--EPSRGVNPDEAVAYGAAVQA 301 (577)
Q Consensus 263 Gssrip~v~~~l~~~f~~~--~i~~~~~p~~aVa~GAa~~a 301 (577)
|+|++ +++.|++.|+.. .+....||++|+|.||+.++
T Consensus 281 Gga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 281 GGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp TTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred ChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99998 999999999532 46677899999999999876
No 26
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.38 E-value=3.1e-12 Score=109.60 Aligned_cols=85 Identities=47% Similarity=0.783 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy13563 477 KLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAK 556 (577)
Q Consensus 477 ~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r 556 (577)
+++++.++||.||+|+|.++..|.+. .+...+++++++.|...++++.+||+++.+++.++|+.++++|++.+.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~-~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDE-GLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCG-GGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999763 47789999999999999999999999988889999999999999999999999
Q ss_pred HHhccC
Q psy13563 557 LYQGAG 562 (577)
Q Consensus 557 ~~e~~~ 562 (577)
+++.+|
T Consensus 82 ~y~~~~ 87 (113)
T 3lof_A 82 LYQGAG 87 (113)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 998654
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.27 E-value=3.9e-12 Score=127.09 Aligned_cols=189 Identities=19% Similarity=0.156 Sum_probs=113.8
Q ss_pred ecHHHHHHHHHHHHHHHHHHHhCCccccEE-EEeCCCCCHHHHHHHHHHHHHcCCceeccccCcceeeeecccccccCCC
Q psy13563 72 FAPEEISAMVLGKMKETAEAYLGKKVTHAV-VTVPAYFNDAQRQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKER 150 (577)
Q Consensus 72 ~~peev~a~~L~~l~~~ae~~~~~~~~~~V-itVPa~f~~~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~ 150 (577)
..|.++++.+|+.+++.+. .....+. +++..+ ...++..++..|+||+|++++ +.....
T Consensus 33 g~~~e~a~~vl~~~~~~a~----~~~~~~~~~a~t~~------------~~~a~~~~~~~Vne~~aha~a-~~~~~~--- 92 (276)
T 4ehu_A 33 GTGTTGPSRVLEKLYGKTG----LAREDIKKVVVTGY------------GRMNYSDADKQISELSCHARG-VNFIIP--- 92 (276)
T ss_dssp CTTSSHHHHHHHHHHHHHC----CCGGGEEEEEEEST------------TGGGCCSCSEECCHHHHHHHH-HHHHST---
T ss_pred CCCHHHHHHHHHHHHHHCC----CcchhccccccCch------------HHHHhhCCCcccchHHHHHHH-HHHhCC---
Confidence 4577889999998887763 2333322 222221 234677888999999999987 544332
Q ss_pred cEEEEEeCCCCch--------------------------hHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCceE
Q psy13563 151 RNVLVFDLGKDLR--------------------------KDKRTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQV 204 (577)
Q Consensus 151 ~~vlV~D~Gggt~--------------------------~D~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~ 204 (577)
....|+|+|||++ |+..+. +..+.+....+ +..+......
T Consensus 93 ~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a-~~l~~~~~~~~-------------~~~~~a~~~~ 158 (276)
T 4ehu_A 93 ETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMA-KIIEVDVSELG-------------SISMNSQNEV 158 (276)
T ss_dssp TCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHH-HHHTCCGGGHH-------------HHHTTCSSCC
T ss_pred CCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHH-HHhccChhhhH-------------HHHhcCCCCC
Confidence 2347889998877 333332 22233332100 1111111110
Q ss_pred EEeeccccCCCcceE--------eeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHh
Q psy13563 205 KIEIESFFEGDDFSE--------TLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 276 (577)
Q Consensus 205 ~i~i~~~~~~~~~~~--------~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~ 276 (577)
. +. ..+..+ .-.....++++..+.+.+.+.+.....+. ..++.|+|+||++++|.|++.+++
T Consensus 159 ~--i~----~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~ 228 (276)
T 4ehu_A 159 S--IS----STCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAR 228 (276)
T ss_dssp C--CC----CCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHH
T ss_pred C--cC----CccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHH
Confidence 0 00 000000 00001134556666666655555544443 457899999999999999999999
Q ss_pred HhCCCCCCCCCCchhHHHhHHHHHHhhhh
Q psy13563 277 FFNNKEPSRGVNPDEAVAYGAAVQAGVLS 305 (577)
Q Consensus 277 ~f~~~~i~~~~~p~~aVa~GAa~~a~~ls 305 (577)
.| +.++..+.+|++++|+|||++|....
T Consensus 229 ~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 229 EI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 99 78888899999999999999996443
No 28
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.23 E-value=1.5e-11 Score=106.49 Aligned_cols=89 Identities=45% Similarity=0.755 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy13563 478 LKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKL 557 (577)
Q Consensus 478 ~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~ 557 (577)
++++.++||.||+|||.++..|.++ .+...+++++|+.|...++++.+||+++..++.++|+.++++|++.+.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~-~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDE-KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCT-TTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999763 356789999999999999999999987777899999999999999999999999
Q ss_pred HhccCCCCCC
Q psy13563 558 YQGAGGAPPP 567 (577)
Q Consensus 558 ~e~~~~~~~~ 567 (577)
++.+|+.|++
T Consensus 92 y~~~~~~~~~ 101 (120)
T 2p32_A 92 YQSAGGAPPG 101 (120)
T ss_dssp CCC-------
T ss_pred HHhccCCCCC
Confidence 8766665554
No 29
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.21 E-value=6.1e-12 Score=132.17 Aligned_cols=186 Identities=17% Similarity=0.111 Sum_probs=69.6
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCCch-------------
Q psy13563 98 THAVVTVPAYFNDAQRQATKDAG-VIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR------------- 163 (577)
Q Consensus 98 ~~~VitVPa~f~~~qr~a~~~Aa-~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~------------- 163 (577)
..++||+|+.++..+|+++.+++ +.+|++.+.++++|+||+++ ++. .+.+|+|+|+||+
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a-~g~------~~~lVVDiG~g~T~v~pv~~G~~~~~ 177 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA-QGL------LTGVVVDSGDGVTHICPVYEGFSLPH 177 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEETTEECST
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHh-CCC------ceEEEEEcCCCceEeeeeECCEEccc
Confidence 35999999999999999998865 77899999999999999988 764 3569999999998
Q ss_pred -----------hHHHHH--HHHhCCCcc--cCHHHHHHHHHHHHHHhHHcCCCc----------------eEEEeecccc
Q psy13563 164 -----------KDKRTV--QKLRRKDLR--KDKRTVQKLRREVEKAKRALSSNF----------------QVKIEIESFF 212 (577)
Q Consensus 164 -----------~D~~l~--~~~~~~~~~--~~~~~~~~l~~~~e~~K~~LS~~~----------------~~~i~i~~~~ 212 (577)
++..|. ....+..+. .+. ..+|.+|+.++... ...+.++
T Consensus 178 ~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp--- 247 (394)
T 1k8k_B 178 LTRRLDIAGRDITRYLIKLLLLRGYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP--- 247 (394)
T ss_dssp TCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---
T ss_pred ceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---
Confidence 555555 111122221 122 34566666554321 1222222
Q ss_pred CCCcceEeeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCCCeEEEEeCCcCcHHHHHHHHhHhCC--
Q psy13563 213 EGDDFSETLTRAKFE---ELNMDL-----FRATMKPVQKVLEDADMN--KKDVDEIVLVGGSTRIPKVQQLVKEFFNN-- 280 (577)
Q Consensus 213 ~~~~~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~V~lvGGssrip~v~~~l~~~f~~-- 280 (577)
++. .++|+++.|. -+++|. ...+.+.|.++|..+... ..-.+.|+|+||+|++|.+.++|++.+..
T Consensus 248 dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~ 325 (394)
T 1k8k_B 248 DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLY 325 (394)
T ss_dssp TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHH
T ss_pred CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHH
Confidence 232 5677777663 223331 234677788888876432 33457899999999999999999888732
Q ss_pred -----------C---C--CCCCCCchhHHHhHHHHHHh
Q psy13563 281 -----------K---E--PSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 281 -----------~---~--i~~~~~p~~aVa~GAa~~a~ 302 (577)
. + +..+.+|..++.+||+++|.
T Consensus 326 ~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 326 LERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHTCSSCCCTTCCCCC---------------------
T ss_pred hhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 0 2 22355778999999999885
No 30
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.21 E-value=1.6e-12 Score=134.43 Aligned_cols=191 Identities=12% Similarity=0.146 Sum_probs=116.2
Q ss_pred cEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeccccCcceeeeecccccccC-----CCcEEEEEeCCC
Q psy13563 99 HAVVTVPAYFNDAQR-QATKDAGVIART------------HRDENINEATGRGPSLMDWTRKK-----ERRNVLVFDLGK 160 (577)
Q Consensus 99 ~~VitVPa~f~~~qr-~a~~~Aa~~AGl------------~~~~li~Ep~AAa~~~y~~~~~~-----~~~~vlV~D~Gg 160 (577)
.+|+.+|..+...+| .++++++..++- ..+.+++||.||+++ |...... .+..++|+|+||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~-~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLD-LNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHH-TTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHH-HHHccCccccccccCcEEEEEeCC
Confidence 789999999988887 589999886543 457899999999987 6654321 477899999999
Q ss_pred CchhHHHHHHHHhCCCc---c-cCHHHHHHHHHHHHHHhHHcCCC-ceEEEeeccccCCCcc---------eEeeeHHHH
Q psy13563 161 DLRKDKRTVQKLRRKDL---R-KDKRTVQKLRREVEKAKRALSSN-FQVKIEIESFFEGDDF---------SETLTRAKF 226 (577)
Q Consensus 161 gt~~D~~l~~~~~~~~~---~-~~~~~~~~l~~~~e~~K~~LS~~-~~~~i~i~~~~~~~~~---------~~~itr~~f 226 (577)
||+ |-.++ ..+... . ..+.....+.++.. ..+... ....+....+..+..+ ...+ .+.+
T Consensus 194 gTt-d~~v~--~~~~~~~~~s~s~~~G~~~~~~~i~---~~l~~~~~g~~l~~~~i~~g~~~~~~~~~~~k~~di-~~~i 266 (355)
T 3js6_A 194 GTT-IIDTY--QNMKRVEEESFVINKGTIDFYKRIA---SHVSKKSEGASITPRMIEKGLEYKQCKLNQKTVIDF-KDEF 266 (355)
T ss_dssp SCE-EEEEE--ETTEECGGGCEEESCCHHHHHHHHH---HHTC--------CHHHHHSCCC-------------C-HHHH
T ss_pred CcE-EEEEE--cCCEEccccccCcchHHHHHHHHHH---HHHHHhcCCCcCCHHHHhcCCccccccccccccccH-HHHH
Confidence 999 21111 000000 0 00001111111110 001100 0000000011111110 1122 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHH--HHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhh
Q psy13563 227 EELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPK--VQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVL 304 (577)
Q Consensus 227 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~--v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~l 304 (577)
++.++++++++...|.+.+.+ ++.++.|+|+||++.++. |.+.|++.|+.. .||..|+|.|+..++..+
T Consensus 267 ~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-----~~p~~anA~G~~~~~~~~ 337 (355)
T 3js6_A 267 YKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-----DDSQFSNVRGYEKLGELL 337 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-----SSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-----CCcHHHHHHHHHHHHHHH
Confidence 666777777777777777653 466899999999999998 999999998432 799999999999998776
Q ss_pred hC
Q psy13563 305 SG 306 (577)
Q Consensus 305 s~ 306 (577)
..
T Consensus 338 ~~ 339 (355)
T 3js6_A 338 KN 339 (355)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 31
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.07 E-value=1.5e-10 Score=99.09 Aligned_cols=85 Identities=45% Similarity=0.765 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13563 481 RVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQG 560 (577)
Q Consensus 481 ~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e~ 560 (577)
+.++||.||+|||.++..|.+. .+...+++++|+.|...++++.+||+++.+++.++|+.++++|++.+.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~-e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDE-KLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSG-GGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999742 267789999999999999999999986555678999999999999999999999876
Q ss_pred cCCCCC
Q psy13563 561 AGGAPP 566 (577)
Q Consensus 561 ~~~~~~ 566 (577)
+|+.|+
T Consensus 81 ~~~~~~ 86 (113)
T 1ud0_A 81 AGGMPG 86 (113)
T ss_dssp SCCCCC
T ss_pred ccCCCC
Confidence 666554
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.88 E-value=1.2e-09 Score=111.81 Aligned_cols=176 Identities=14% Similarity=0.139 Sum_probs=112.2
Q ss_pred ccEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeccccCcceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 98 THAVVTVPAYFND--AQRQATKDAGVIA--------R------THRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 98 ~~~VitVPa~f~~--~qr~a~~~Aa~~A--------G------l~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
..+|+++|..+.. .+|+.+++....- | +..+.+++||.+|.+. + ....+..+++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~-~--~~~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFL-E--QENFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHH-S--CCCCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhh-c--chhhccCCEEEEEeCCC
Confidence 4789999998764 3677777766521 1 1235678888877754 2 22235789999999999
Q ss_pred ch------------------------hHHHHH---HH-HhCCCcccCHHHHHHHHHHHHHHhHHcCCCceEEEeeccccC
Q psy13563 162 LR------------------------KDKRTV---QK-LRRKDLRKDKRTVQKLRREVEKAKRALSSNFQVKIEIESFFE 213 (577)
Q Consensus 162 t~------------------------~D~~l~---~~-~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~~~i~i~~~~~ 213 (577)
|+ +++.+. .+ +++..+.. ..++++|+. .. ...
T Consensus 183 Ttd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~---------~~~e~i~~~--g~---------~~~ 242 (329)
T 4apw_A 183 NMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLITN---------EQAESALNN--GY---------MKK 242 (329)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTS---------BTTTTCSSS--CS---------SCE
T ss_pred cEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCCH---------HHHHHHHhc--CC---------ccc
Confidence 99 222222 11 22222111 011222211 00 000
Q ss_pred CCcceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHH
Q psy13563 214 GDDFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAV 293 (577)
Q Consensus 214 ~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aV 293 (577)
+.++ ..++.+.+++.++++++.+.+.+.+. +..++.++.|+|+||++.+ +.+.|++.| +..+....||..|+
T Consensus 243 g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~~v~v~~~P~~a~ 314 (329)
T 4apw_A 243 GGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTY-PNNSIITNNSQWTT 314 (329)
T ss_dssp ECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHS-TTCEECCSSGGGHH
T ss_pred CCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHc-CCCCEecCCChhhH
Confidence 1122 13456777777778887777777666 3456668999999999998 569999999 44566677999999
Q ss_pred HhHHHHHHhhh
Q psy13563 294 AYGAAVQAGVL 304 (577)
Q Consensus 294 a~GAa~~a~~l 304 (577)
|+|+..++...
T Consensus 315 a~G~~~~~~~k 325 (329)
T 4apw_A 315 CEGLYKVAVAK 325 (329)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999887654
No 33
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.52 E-value=2.4e-08 Score=105.15 Aligned_cols=172 Identities=19% Similarity=0.104 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHc-CC--ceeccccCcceeeeecccccccCCCcEEEEEeCCCCch----h------------------HH
Q psy13563 112 QRQATKDAGVIA-RT--HRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR----K------------------DK 166 (577)
Q Consensus 112 qr~a~~~Aa~~A-Gl--~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~----~------------------D~ 166 (577)
+-+.+..|.+.+ |+ ++-. -||.||+++ ++.....+..++++||||||+ | ..
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~la--aLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~ 446 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAG--ALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSL 446 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHH--HTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhh--hcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHH
Confidence 345578888888 99 6666 899999986 677666788899999999998 1 11
Q ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCC----------ceEEEee--ccccC---CC------cceEeeeHHH
Q psy13563 167 RTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSN----------FQVKIEI--ESFFE---GD------DFSETLTRAK 225 (577)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~----------~~~~i~i--~~~~~---~~------~~~~~itr~~ 225 (577)
.+ ....+.+ =+..||++|. .... ....+.+ +.+.. .. +.-..| +..
T Consensus 447 DI-A~~Lg~~----------d~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R 513 (607)
T 1nbw_A 447 LI-KTELGLE----------DLSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNA 513 (607)
T ss_dssp HH-HHHHTCS----------CHHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCS
T ss_pred HH-HHHhCCC----------CHHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCC
Confidence 11 1112221 0368999998 4211 1112333 22111 01 111234 444
Q ss_pred --HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCC-------CCCCCc
Q psy13563 226 --FEELNMDLFRATMKP--VQKVLEDADMN-----KKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEP-------SRGVNP 289 (577)
Q Consensus 226 --fe~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i-------~~~~~p 289 (577)
+|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.+|.+.++.++.|+.-++ ...-.|
T Consensus 514 ~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~~gP 592 (607)
T 1nbw_A 514 SPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGP 592 (607)
T ss_dssp SCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGTSCS
T ss_pred cchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCc
Confidence 555 44444444443 45557776653 35679999999999999999999999954132 223489
Q ss_pred hhHHHhHHHHHH
Q psy13563 290 DEAVAYGAAVQA 301 (577)
Q Consensus 290 ~~aVa~GAa~~a 301 (577)
..|+|.|.++|.
T Consensus 593 ~fAtAvGLlly~ 604 (607)
T 1nbw_A 593 RNAVATGLLLAG 604 (607)
T ss_dssp CCHHHHHHHHHH
T ss_pred hHHHHHHHHHhh
Confidence 999999999764
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.51 E-value=3.7e-07 Score=95.91 Aligned_cols=175 Identities=19% Similarity=0.136 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHc-CC--ceeccccCcceeeeecccccccCCCcEEEEEeCCCCch----h------------------
Q psy13563 110 DAQRQATKDAGVIA-RT--HRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR----K------------------ 164 (577)
Q Consensus 110 ~~qr~a~~~Aa~~A-Gl--~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~----~------------------ 164 (577)
..+-+.+..|.+.+ |+ ++-. -||.||+++ ++.....+..++++||||||+ |
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAgla--aLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~V 442 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILG--ALTTPGTTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMV 442 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHH--HTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHH
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhh--hcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHH
Confidence 35567788899999 99 7766 899999986 677666788899999999998 1
Q ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhHHcCCC----------ceEEEee--ccccC---CC------cceEeeeH
Q psy13563 165 DKRTVQKLRRKDLRKDKRTVQKLRREVEKAKRALSSN----------FQVKIEI--ESFFE---GD------DFSETLTR 223 (577)
Q Consensus 165 D~~l~~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~----------~~~~i~i--~~~~~---~~------~~~~~itr 223 (577)
...+ ....+.+ =+..||++|+ .... ....+.+ +.+.. .. +.-..| +
T Consensus 443 T~DI-A~~Lgt~----------d~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~ 509 (610)
T 2d0o_A 443 TMII-ARELGLE----------DRYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-P 509 (610)
T ss_dssp HHHH-HHHHTCC----------CHHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-C
T ss_pred HHHH-HHHhCCC----------CHHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccceeee-C
Confidence 1111 1112221 0368999998 4211 1112333 22111 01 111244 4
Q ss_pred HH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCC-------CCCC
Q psy13563 224 AK--FEELNMDLFRATMKP--VQKVLEDADM-----NKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEP-------SRGV 287 (577)
Q Consensus 224 ~~--fe~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i-------~~~~ 287 (577)
.. +|+ ++-+-+++.+. +...|+..+. +..+|..|+|+||+|.++.+.++.++.|+.-++ ...-
T Consensus 510 pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~~gv~ 588 (610)
T 2d0o_A 510 GDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSE 588 (610)
T ss_dssp TTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCGGGTS
T ss_pred CCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccC
Confidence 45 555 44444444433 2333554332 245789999999999999999999999944132 2234
Q ss_pred CchhHHHhHHHHHHh
Q psy13563 288 NPDEAVAYGAAVQAG 302 (577)
Q Consensus 288 ~p~~aVa~GAa~~a~ 302 (577)
.|..|+|.|.++|.+
T Consensus 589 gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 589 GPRNAVATGLILSWH 603 (610)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHh
Confidence 899999999997654
No 35
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.34 E-value=2.2e-07 Score=98.08 Aligned_cols=213 Identities=14% Similarity=0.028 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHhCCc--cccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeccccCcceeeeeccccccc--CCCc
Q psy13563 77 ISAMVLGKMKETAEAYLGKK--VTHAVVTVPAYFNDAQRQATKDAG-VIARTHRDENINEATGRGPSLMDWTRK--KERR 151 (577)
Q Consensus 77 v~a~~L~~l~~~ae~~~~~~--~~~~VitVPa~f~~~qr~a~~~Aa-~~AGl~~~~li~Ep~AAa~~~y~~~~~--~~~~ 151 (577)
....+++++.. +.++.. -..+++|.|+......|+.+.+.+ +..|++-+.++.+|.+|+++ .+.... ....
T Consensus 104 ~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a-~G~~~~~~~~~~ 179 (427)
T 3dwl_A 104 HMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAA-SWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHG-GGGSTTTCSCCC
T ss_pred HHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHh-cCCcccccCCCc
Confidence 44455555432 223332 246999999999999999999988 67899999999999999876 553211 1134
Q ss_pred EEEEEeCCCCch------------------------hHHHHH---HHHhCCCcccCHHHHHHHHHHHHHHhHHcCCCce-
Q psy13563 152 NVLVFDLGKDLR------------------------KDKRTV---QKLRRKDLRKDKRTVQKLRREVEKAKRALSSNFQ- 203 (577)
Q Consensus 152 ~vlV~D~Gggt~------------------------~D~~l~---~~~~~~~~~~~~~~~~~l~~~~e~~K~~LS~~~~- 203 (577)
+-||+|+|+|++ ++..|. ..++.. ..=...++.+|+.++....
T Consensus 180 tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---------~~~~~~~~~IKe~~cyv~~d 250 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---------DSSLKTAERIKEECCYVCPD 250 (427)
T ss_dssp CEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------------CHHHHHHHHHHCCCCSC
T ss_pred eEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---------chhHHHHHHHHHhcCcccCC
Confidence 679999999988 444443 111110 0112456677777653211
Q ss_pred ------------EEEeeccc--cCCCcceEeeeHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCC--cCCCCeE
Q psy13563 204 ------------VKIEIESF--FEGDDFSETLTRAKFE---ELNMDL------FRATMKPVQKVLEDADMN--KKDVDEI 258 (577)
Q Consensus 204 ------------~~i~i~~~--~~~~~~~~~itr~~fe---~~~~~~------~~~~~~~i~~~l~~~~~~--~~~i~~V 258 (577)
..+.--.+ .++....++|..+.|. -++.|- ...+.+.|.++|..+... +.-...|
T Consensus 251 ~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nI 330 (427)
T 3dwl_A 251 IVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNI 330 (427)
T ss_dssp HHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCE
T ss_pred HHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCE
Confidence 00000001 2333345667766652 233441 234677777777765432 1113569
Q ss_pred EEEeCCcCcHHHHHHHHhHhCC---------------------CCCCCCCCchhHHHhHHHHHHh
Q psy13563 259 VLVGGSTRIPKVQQLVKEFFNN---------------------KEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 259 ~lvGGssrip~v~~~l~~~f~~---------------------~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+|+||+|.+|.+.++|.+.+.. .++..+.++..++=+|++++|.
T Consensus 331 vLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 331 VLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp EEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred EEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 9999999999999999876511 1123345678899999999985
No 36
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.01 E-value=1.4e-05 Score=85.35 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCc--cc-cEEEEeCCCCCHHHHHHHHHHH-HHcCCceeccccCcceeeeecccccccCCC
Q psy13563 75 EEISAMVLGKMKETAEAYLGKK--VT-HAVVTVPAYFNDAQRQATKDAG-VIARTHRDENINEATGRGPSLMDWTRKKER 150 (577)
Q Consensus 75 eev~a~~L~~l~~~ae~~~~~~--~~-~~VitVPa~f~~~qr~a~~~Aa-~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~ 150 (577)
=+....+++++... .++.. -. .++||.|+......|+.+.+++ +..|+.-+.++.+|.+|+++ ++..
T Consensus 92 wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya-~G~~----- 162 (498)
T 3qb0_A 92 WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFA-AGRP----- 162 (498)
T ss_dssp HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHH-HTCS-----
T ss_pred HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHH-cCCC-----
Confidence 34455666665432 23321 22 5899999999999999999875 77899999999999999876 5542
Q ss_pred cEEEEEeCCCCch
Q psy13563 151 RNVLVFDLGKDLR 163 (577)
Q Consensus 151 ~~vlV~D~Gggt~ 163 (577)
+-||+|+|+|++
T Consensus 163 -tglVVDiG~g~T 174 (498)
T 3qb0_A 163 -NCLVVDIGHDTC 174 (498)
T ss_dssp -SEEEEEECSSCE
T ss_pred -eEEEEEcCCCcE
Confidence 349999999987
No 37
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=97.79 E-value=0.00016 Score=79.57 Aligned_cols=66 Identities=11% Similarity=0.133 Sum_probs=51.9
Q ss_pred HHhCCccc-----cEEEEeCCCCCHHHHHHHHHHHH-HcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCCch
Q psy13563 91 AYLGKKVT-----HAVVTVPAYFNDAQRQATKDAGV-IARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR 163 (577)
Q Consensus 91 ~~~~~~~~-----~~VitVPa~f~~~qr~a~~~Aa~-~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~ 163 (577)
..++.... .+++|.|..++...|+.+.+.+. ..|+.-+.++.++.+|+++ ++.. +-+|+|+|.+.+
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya-~G~~------tglVVDiG~~~T 258 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYG-SGLS------STCIVDVGDQKT 258 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHH-HTCS------EEEEEEECSSCE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHH-CCCC------ceEEEEeCCCce
Confidence 45665443 39999999999999988777654 4689999999999999866 5432 569999998876
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=96.71 E-value=0.0031 Score=61.98 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhh
Q psy13563 228 ELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVL 304 (577)
Q Consensus 228 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~l 304 (577)
.++..+++.+...+.++++..++ .+.|+++||.++.|.+++.+.+.+ +.++..+.+++.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 34444455444444455443321 378999999999999999999999 6777777778889999999998653
No 39
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.05 E-value=0.014 Score=63.21 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhhhC
Q psy13563 227 EELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVLSG 306 (577)
Q Consensus 227 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~ls~ 306 (577)
..++.-+++.+.-.+...++..+.....++.|.++||+++.+++.+.+.+.| +.++... .+.|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4445555555555555556555544456789999999999999999999999 6766544 5678999999999975443
No 40
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.04 E-value=0.011 Score=64.27 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=61.4
Q ss_pred eEeeeHHHHHHHHHHHHHHHHHHHHHHH---HHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHH
Q psy13563 218 SETLTRAKFEELNMDLFRATMKPVQKVL---EDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVA 294 (577)
Q Consensus 218 ~~~itr~~fe~~~~~~~~~~~~~i~~~l---~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa 294 (577)
+..-||.++-.++.-+++.+.-.+...+ ++.+ ..++.|.++||.++.+.+.+.+.+.| +.++... ...++.|
T Consensus 406 ~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g---~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~a 480 (554)
T 3l0q_A 406 KLSTTPEDMALRYLATIQALALGTRHIIETMNQNG---YNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAML 480 (554)
T ss_dssp CSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchH
Confidence 3445788875445555555544443333 3344 35789999999999999999999999 6776554 4567999
Q ss_pred hHHHHHHhhhhCCC
Q psy13563 295 YGAAVQAGVLSGEQ 308 (577)
Q Consensus 295 ~GAa~~a~~ls~~~ 308 (577)
+|||+.|+.-.+.+
T Consensus 481 lGAA~lA~~a~G~~ 494 (554)
T 3l0q_A 481 LGSAMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHcCCc
Confidence 99999998665543
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.84 E-value=0.012 Score=62.74 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=43.9
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhhhCC
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVLSGE 307 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~ls~~ 307 (577)
.++.|.++||.++.+.+.+.+.+.| +.++.....++.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 4688999999999999999999999 7777666455546999999999765553
No 42
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.76 E-value=0.021 Score=61.49 Aligned_cols=82 Identities=20% Similarity=0.183 Sum_probs=56.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCC-CCCCCchhHHHhHHH
Q psy13563 220 TLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEP-SRGVNPDEAVAYGAA 298 (577)
Q Consensus 220 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i-~~~~~p~~aVa~GAa 298 (577)
.-||.++- .-+++.+.-.+...++...- .. ++.|.++||+++.+.+.+.+.+.| +.++ .. ..+.|+.|+|||
T Consensus 373 ~~~~~~l~---RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA 445 (511)
T 3hz6_A 373 ATTRAQIL---LAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLA 445 (511)
T ss_dssp TCCHHHHH---HHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHH
T ss_pred CCCHHHHH---HHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHH
Confidence 34565553 33344443333333333221 23 789999999999999999999999 6776 44 468899999999
Q ss_pred HHHhhhhCCC
Q psy13563 299 VQAGVLSGEQ 308 (577)
Q Consensus 299 ~~a~~ls~~~ 308 (577)
+.|+.-.+..
T Consensus 446 ~lA~~a~G~~ 455 (511)
T 3hz6_A 446 ALAAVELEWS 455 (511)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHhCCc
Confidence 9998665543
No 43
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.71 E-value=0.021 Score=61.37 Aligned_cols=53 Identities=21% Similarity=0.127 Sum_probs=44.7
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhhhCCC
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVLSGEQ 308 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~ls~~~ 308 (577)
.++.|.++||.++.+.+.+.+.+.| +.++... .+.|+.|+|||+.|+.-.+..
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcCcc
Confidence 5899999999999999999999999 6776554 566799999999998655543
No 44
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.66 E-value=0.025 Score=60.61 Aligned_cols=80 Identities=21% Similarity=0.259 Sum_probs=55.7
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHH
Q psy13563 222 TRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQA 301 (577)
Q Consensus 222 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a 301 (577)
++.++ +.-+++.+.-.+..+++...-.. .++.|.++||.++.+.+.+.+.+.| +.++... .+.++.|+|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 45444 33444444444444444433222 5789999999999999999999999 6776544 45569999999999
Q ss_pred hhhhCC
Q psy13563 302 GVLSGE 307 (577)
Q Consensus 302 ~~ls~~ 307 (577)
+.-.+.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 765554
No 45
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.59 E-value=0.016 Score=62.49 Aligned_cols=80 Identities=23% Similarity=0.358 Sum_probs=55.5
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHH
Q psy13563 222 TRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQ 300 (577)
Q Consensus 222 tr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~ 300 (577)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++.|.+.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHH
Confidence 5655443 23333333333333 3444444 4789999999999999999999999 6766553 5567999999999
Q ss_pred HhhhhCC
Q psy13563 301 AGVLSGE 307 (577)
Q Consensus 301 a~~ls~~ 307 (577)
|+.-.+.
T Consensus 469 A~~a~G~ 475 (515)
T 3i8b_A 469 AAWVLSG 475 (515)
T ss_dssp HHHHHHC
T ss_pred HHHHcCC
Confidence 9865543
No 46
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.54 E-value=0.027 Score=60.85 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=59.8
Q ss_pred eeeHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHH
Q psy13563 220 TLTRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAA 298 (577)
Q Consensus 220 ~itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa 298 (577)
.-+|.++-+ +++.+.-.+...++.+-+..|. .++.|.++||+|+.+++.+.+.+.| +.++... ...|+.|+|||
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA 444 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAA 444 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHH
Confidence 345655543 2333334444444444445565 4789999999999999999999999 6777654 55679999999
Q ss_pred HHHhhhhCCCC
Q psy13563 299 VQAGVLSGEQD 309 (577)
Q Consensus 299 ~~a~~ls~~~~ 309 (577)
+.|+.-.+.+.
T Consensus 445 ~lA~~a~G~~~ 455 (526)
T 3ezw_A 445 YLAGLAVGFWQ 455 (526)
T ss_dssp HHHHHHTTSSS
T ss_pred HHHHHHhCCCC
Confidence 99987666543
No 47
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.25 E-value=0.026 Score=60.59 Aligned_cols=82 Identities=23% Similarity=0.295 Sum_probs=57.0
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHH
Q psy13563 222 TRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQ 300 (577)
Q Consensus 222 tr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~ 300 (577)
+|.++-+ +++-+.-.+...++.+-+..+. .++.|.++||.++.+++.+.+.+.| +.++... .+.|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 5555443 3333434444444443333454 4789999999999999999999999 6766543 5678999999999
Q ss_pred HhhhhCCC
Q psy13563 301 AGVLSGEQ 308 (577)
Q Consensus 301 a~~ls~~~ 308 (577)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98666654
No 48
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=95.23 E-value=0.05 Score=53.62 Aligned_cols=77 Identities=14% Similarity=0.084 Sum_probs=54.1
Q ss_pred eeeHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeC-CcCcHHHHHHHHhHh--CCCCCCCCCCchhHHHh
Q psy13563 220 TLTRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGG-STRIPKVQQLVKEFF--NNKEPSRGVNPDEAVAY 295 (577)
Q Consensus 220 ~itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG-ssrip~v~~~l~~~f--~~~~i~~~~~p~~aVa~ 295 (577)
..+++++-. ++.-+.+++..+.....+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|..+.|+
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 345655442 334444444444444344443 467999999 899999999999974 46677778899999999
Q ss_pred HHHHHH
Q psy13563 296 GAAVQA 301 (577)
Q Consensus 296 GAa~~a 301 (577)
|||+++
T Consensus 281 GAaL~~ 286 (287)
T 2ews_A 281 GALYLE 286 (287)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999864
No 49
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.13 E-value=0.022 Score=62.10 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=54.3
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCc-CcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 222 TRAKFEEL-NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGST-RIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 222 tr~~fe~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGss-rip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
+|.+|-.. ++-+.-.+...++ .|++.+. .++.|.++||++ +.+++.+.+.+.| +.++... .+.|+.|+|||+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIVD-AFHGRGV---EVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHH
Confidence 56654432 2223333333332 3344443 578999999999 9999999999999 6766543 567899999999
Q ss_pred HHhhhhC
Q psy13563 300 QAGVLSG 306 (577)
Q Consensus 300 ~a~~ls~ 306 (577)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9986554
No 50
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.01 E-value=0.023 Score=61.19 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=43.7
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhhhhCCC
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGVLSGEQ 308 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~ls~~~ 308 (577)
.++.|.++||.++.|.+.+.+.+.| +.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 4789999999999999999999999 6776643 567799999999998766654
No 51
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.99 E-value=0.031 Score=60.04 Aligned_cols=83 Identities=19% Similarity=0.261 Sum_probs=57.4
Q ss_pred eeHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 221 LTRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 221 itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
-+|.++-+ +++-+.-.+...++.+-+..+. .++.|.++||.++.+++.+.+.+.| +.++... .+.|+.|+|||+
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 446 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAY 446 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHH
Confidence 35655543 3333434444444433333454 4789999999999999999999999 6766543 567899999999
Q ss_pred HHhhhhCCC
Q psy13563 300 QAGVLSGEQ 308 (577)
Q Consensus 300 ~a~~ls~~~ 308 (577)
.|+.-.+.+
T Consensus 447 lA~~a~G~~ 455 (506)
T 3h3n_X 447 LAGLAVGFW 455 (506)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCcc
Confidence 998665544
No 52
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.97 E-value=0.048 Score=58.32 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=55.3
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHH
Q psy13563 222 TRAKFE-ELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQ 300 (577)
Q Consensus 222 tr~~fe-~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~ 300 (577)
++.++- .+++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 555543 23444444444444433222343 4688999999999999999999999 6776544 4566999999999
Q ss_pred HhhhhCC
Q psy13563 301 AGVLSGE 307 (577)
Q Consensus 301 a~~ls~~ 307 (577)
|+.-.+.
T Consensus 443 a~~a~G~ 449 (495)
T 2dpn_A 443 AGVGAGA 449 (495)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9765543
No 53
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.92 E-value=0.029 Score=60.28 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=56.5
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHH
Q psy13563 222 TRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQ 300 (577)
Q Consensus 222 tr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~ 300 (577)
+|.++-. +++.+.-.+...++.+-+..+. .++.|.++||.++.+.+.+.+.+.| +.++... .+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHH
Confidence 5555443 2333333444444433333354 4789999999999999999999999 6766543 4677999999999
Q ss_pred HhhhhCCC
Q psy13563 301 AGVLSGEQ 308 (577)
Q Consensus 301 a~~ls~~~ 308 (577)
|+.-.+.+
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 98666543
No 54
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.87 E-value=0.031 Score=60.04 Aligned_cols=81 Identities=20% Similarity=0.131 Sum_probs=55.8
Q ss_pred eeHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 221 LTRAKFEEL-NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 221 itr~~fe~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
-+|.++-.. ++.+.-.+...++ .|++.+. .++.|.++||.++.+.+.+.+.+.| +.++.... ..|+.|+|||+
T Consensus 370 ~~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~ 443 (508)
T 3ifr_A 370 HTRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLA-NPLGSAVGAAW 443 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEE-CCSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecC-CCCchHHHHHH
Confidence 356655432 3333333333333 3344454 4789999999999999999999999 67776553 35689999999
Q ss_pred HHhhhhCC
Q psy13563 300 QAGVLSGE 307 (577)
Q Consensus 300 ~a~~ls~~ 307 (577)
.|+.-.+.
T Consensus 444 lA~~a~G~ 451 (508)
T 3ifr_A 444 VAAIGGGD 451 (508)
T ss_dssp HHHHHTCS
T ss_pred HHHHHhCC
Confidence 99865554
No 55
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.68 E-value=0.079 Score=56.77 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=57.9
Q ss_pred eeHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 221 LTRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 221 itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
-+|.++-. +++.+.-.+...++.+-+..+. .++.|.++||.++.+.+.+.+.+.| +.++... .+.++.|+|||+
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~ 446 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAY 446 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHH
Confidence 35655543 3444444455555444333454 3689999999999999999999999 6776544 556799999999
Q ss_pred HHhhhhCC
Q psy13563 300 QAGVLSGE 307 (577)
Q Consensus 300 ~a~~ls~~ 307 (577)
.|+.-.+.
T Consensus 447 lA~~~~G~ 454 (504)
T 2d4w_A 447 AAGIAVGF 454 (504)
T ss_dssp HHHHHHTS
T ss_pred HHHhhcCc
Confidence 99866554
No 56
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.04 E-value=0.13 Score=54.97 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=56.3
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCC-CeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 222 TRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDV-DEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 222 tr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i-~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
+|.++-. +++-+.-.+...++.+-+..+. .+ +.|.++||.++.+.+.+.+.+.+ +.++... .+.++.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHH
Confidence 5555443 3444444444444444333453 36 78999999999999999999999 6776544 456699999999
Q ss_pred HHhhhhCC
Q psy13563 300 QAGVLSGE 307 (577)
Q Consensus 300 ~a~~ls~~ 307 (577)
.|+.-.+.
T Consensus 451 la~~~~G~ 458 (503)
T 2w40_A 451 LAGLEVKI 458 (503)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCc
Confidence 99765554
No 57
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.77 E-value=0.073 Score=56.78 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=52.5
Q ss_pred EeeeHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHH
Q psy13563 219 ETLTRAKFEE-LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGA 297 (577)
Q Consensus 219 ~~itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GA 297 (577)
..-+|.++-+ +++.+.-.+...++.+-+..+. .++.|.++||.|+.+++.+.+.+.| +.++... . .++.|+||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~-~e~~alGa 433 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAG-P-VEASTLGN 433 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-C-TTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecC-C-ccHhHHHH
Confidence 3446665543 3344444444444443222443 4689999999999999999999999 6777544 2 58999999
Q ss_pred HHHHh
Q psy13563 298 AVQAG 302 (577)
Q Consensus 298 a~~a~ 302 (577)
|+.|.
T Consensus 434 a~~A~ 438 (489)
T 2uyt_A 434 IGIQL 438 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 58
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=92.82 E-value=0.059 Score=58.50 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=51.1
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHHH-HcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCCch
Q psy13563 98 THAVVTVPAYFNDAQRQATKDAGV-IARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR 163 (577)
Q Consensus 98 ~~~VitVPa~f~~~qr~a~~~Aa~-~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~ 163 (577)
..+++|.|+.+....|+.+.+.+. ..|++-+.++.+|.+|+++ ++. ..+-||+|+|+|++
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlya-sGl-----~ttGLVVDiG~g~T 282 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYG-AGI-----STSTCVVNIGAAET 282 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHH-SCC-----SSCEEEEEECSSCE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHh-CCC-----CCceEEEcCCCceE
Confidence 369999999999999999999885 5899999999999999876 553 23569999999987
No 59
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=92.76 E-value=0.18 Score=51.06 Aligned_cols=47 Identities=17% Similarity=0.084 Sum_probs=40.2
Q ss_pred CCeEEEEeC-CcCcHHHHHHHHhHhC-----CCCCCCCCCchhHHHhHHHHHH
Q psy13563 255 VDEIVLVGG-STRIPKVQQLVKEFFN-----NKEPSRGVNPDEAVAYGAAVQA 301 (577)
Q Consensus 255 i~~V~lvGG-ssrip~v~~~l~~~f~-----~~~i~~~~~p~~aVa~GAa~~a 301 (577)
++.|+++|| .+..|.+++.|+..++ +.++....+|..+.|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 8999999999999872 4566667799999999999875
No 60
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=89.45 E-value=0.29 Score=52.00 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=51.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhH-hCCCCCCCCCCchhHHHhHHHHHHhh
Q psy13563 227 EELNMDLFRA--TMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF-FNNKEPSRGVNPDEAVAYGAAVQAGV 303 (577)
Q Consensus 227 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~-f~~~~i~~~~~p~~aVa~GAa~~a~~ 303 (577)
..+..-+++. +.-.+..+++... ..+.|.++||.++.|+..+.+.+. | +.++... ...|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRP-DCAVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHST-TSEEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEc-CCCchHHHHHHHHhCc
Confidence 3445555553 3444445554432 127899999999999999999999 9 6777655 4456899999999974
Q ss_pred h
Q psy13563 304 L 304 (577)
Q Consensus 304 l 304 (577)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 3
No 61
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=85.81 E-value=13 Score=36.79 Aligned_cols=49 Identities=14% Similarity=0.028 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCceeccccCcceeeeeccccccc--CCCcEEEEEeCCCCch
Q psy13563 114 QATKDAGVIARTHRDENINEATGRGPSLMDWTRK--KERRNVLVFDLGKDLR 163 (577)
Q Consensus 114 ~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~--~~~~~vlV~D~Gggt~ 163 (577)
..+..+-+..|+++ .+|+-..=|.+.+.+.... ......+|+|+|||++
T Consensus 93 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 143 (315)
T 3mdq_A 93 VLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSV 143 (315)
T ss_dssp HHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCE
T ss_pred HHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCce
Confidence 34566666689987 4555444444332333221 1245789999999998
No 62
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=80.42 E-value=4.4 Score=40.98 Aligned_cols=72 Identities=17% Similarity=0.278 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCC----CCCCchhHHHhHHHHHHh
Q psy13563 228 ELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPS----RGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 228 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~----~~~~p~~aVa~GAa~~a~ 302 (577)
.+..-+.+=+...|.+.++... ..++.|+++||+++.|.+.++|++.+++..+. ..++++.-=|..-|++|.
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~ 335 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHH
Confidence 3444444445555555555543 23689999999999999999999999654432 234455444444555554
No 63
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=78.49 E-value=4.3 Score=45.47 Aligned_cols=64 Identities=16% Similarity=0.247 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCC--CCCCCC---CchhHHHhHHHHHHhhh
Q psy13563 236 ATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNK--EPSRGV---NPDEAVAYGAAVQAGVL 304 (577)
Q Consensus 236 ~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~--~i~~~~---~p~~aVa~GAa~~a~~l 304 (577)
-+.+.+.++.+..+ ++.|+|.||......+++.|.+.+... ++..+. --|..+|+|+|++|+..
T Consensus 692 ~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 692 AFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34445555555544 578999999999999999999987432 333221 23889999999888654
No 64
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=77.49 E-value=5.9 Score=39.63 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC--CCCCCCC---CCchhHHHhHHHHHHhhhhC
Q psy13563 233 LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN--NKEPSRG---VNPDEAVAYGAAVQAGVLSG 306 (577)
Q Consensus 233 ~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~--~~~i~~~---~~p~~aVa~GAa~~a~~ls~ 306 (577)
+.+.+...+.++++..+ ++.|+|.||.+....+++.|.+.+. +.++..+ +--|-++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555666666666665 4799999999999999999998873 2233322 23588999999976644343
No 65
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=77.39 E-value=5.4 Score=43.61 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCC---CCCCchhHHHhHHHHHHhh
Q psy13563 234 FRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPS---RGVNPDEAVAYGAAVQAGV 303 (577)
Q Consensus 234 ~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~---~~~~p~~aVa~GAa~~a~~ 303 (577)
++.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+.+.++. ..+--|-++|+|.|++|+.
T Consensus 584 a~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3344444455544443 589999999999999999999987433332 2234589999999998853
No 66
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=77.30 E-value=4.1 Score=45.46 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC--CCCCCC---CCCchhHHHhHHHHHHhhhhC
Q psy13563 235 RATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN--NKEPSR---GVNPDEAVAYGAAVQAGVLSG 306 (577)
Q Consensus 235 ~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~--~~~i~~---~~~p~~aVa~GAa~~a~~ls~ 306 (577)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++.. ..--|-++|+|.|++|+....
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 333444455555544 5899999999999999999998872 223222 223489999999998875443
No 67
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=76.99 E-value=5 Score=40.03 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC--CCCCCCCC---CchhHHHhHHHHHHhh
Q psy13563 233 LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN--NKEPSRGV---NPDEAVAYGAAVQAGV 303 (577)
Q Consensus 233 ~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~--~~~i~~~~---~p~~aVa~GAa~~a~~ 303 (577)
+.+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++..+. --|.++++|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33444555555555543 5799999999999999999998762 23343332 2367889998876543
No 68
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=76.82 E-value=0.79 Score=45.70 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCceeccccCcceeeeecccccccC-CCcEEEEEeCCCCch
Q psy13563 113 RQATKDAGVIARTHRDENINEATGRGPSLMDWTRKK-ERRNVLVFDLGKDLR 163 (577)
Q Consensus 113 r~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~-~~~~vlV~D~Gggt~ 163 (577)
...+..+-+..|+++.-|-.|.+|...+ .+....- .....+|+|+|||++
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~-~gv~~~l~~~~~~lvvDIGGGSt 150 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAY-LAVAYSLKPEGEVCVVDQGGGST 150 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHH-HHHHHHTCCCSEEEEEEEETTEE
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHH-HHHHhhcccCCCEEEEEeCCCcE
Confidence 3445555567899986555555554432 3332221 255799999999999
No 69
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=73.81 E-value=6.3 Score=39.80 Aligned_cols=70 Identities=19% Similarity=0.243 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCC----CCC--CchhHHHhHHHHH
Q psy13563 227 EELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPS----RGV--NPDEAVAYGAAVQ 300 (577)
Q Consensus 227 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~----~~~--~p~~aVa~GAa~~ 300 (577)
+.+..-+.+=+...|.+.++... ..+.|+++||+++.|.+.++|++.+++..+. ..+ +..||+|. |++
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHH
Confidence 34555555555666666665542 3579999999999999999999999653332 123 44466665 555
Q ss_pred Hh
Q psy13563 301 AG 302 (577)
Q Consensus 301 a~ 302 (577)
|.
T Consensus 340 A~ 341 (370)
T 3cqy_A 340 AM 341 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 70
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=73.01 E-value=6 Score=38.57 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=36.7
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+.+.|+|.||.+..+.+.+.+++.+...++..+. .+.+.+.||+.++.
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAY 286 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHH
Confidence 4578999999887788888888887444455444 56789999998774
No 71
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=69.45 E-value=2.5 Score=42.51 Aligned_cols=86 Identities=20% Similarity=0.122 Sum_probs=48.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHH------HHHHHHHHHcCCceeccccCcceeeeeccccc
Q psy13563 72 FAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQR------QATKDAGVIARTHRDENINEATGRGPSLMDWT 145 (577)
Q Consensus 72 ~~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr------~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~ 145 (577)
+++ +.+...+..|+..++..-...+..+.+ .-|..-| ..+..+-+..|+++ .+|+-..=|.+.+.+..
T Consensus 63 ls~-eai~r~~~aL~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~ 136 (343)
T 3cer_A 63 FAD-EALERAYVAAREFAGVIAEHPIDGLRF----VATSATRDAENREEFEDEIERILGVRP-EVIPGTEEADLSFLGAT 136 (343)
T ss_dssp CCH-HHHHHHHHHHHHHHHHHTTSCCSEEEE----EECHHHHHCTTHHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHH
T ss_pred cCH-HHHHHHHHHHHHHHHHHHHCCCCeEEE----EecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHH
Confidence 443 455566666666655544444543221 1233333 44566666679987 56666555554423332
Q ss_pred cc--C--CCcEEEEEeCCCCch
Q psy13563 146 RK--K--ERRNVLVFDLGKDLR 163 (577)
Q Consensus 146 ~~--~--~~~~vlV~D~Gggt~ 163 (577)
.. . .....+|+|+|||++
T Consensus 137 ~~~~~~~~~~~~lviDIGGGSt 158 (343)
T 3cer_A 137 SVVNRDDLPAPYLVVDLGGGST 158 (343)
T ss_dssp SSCCTTTCCSSEEEEEECSSCE
T ss_pred hhCccccccCCEEEEEeCCCce
Confidence 21 1 235699999999999
No 72
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=66.85 E-value=14 Score=39.58 Aligned_cols=80 Identities=19% Similarity=0.147 Sum_probs=53.4
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCC-CCCchhHHHhHHHHH
Q psy13563 223 RAKFEELNMD-LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSR-GVNPDEAVAYGAAVQ 300 (577)
Q Consensus 223 r~~fe~~~~~-~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~-~~~p~~aVa~GAa~~ 300 (577)
..++...++. +.+-+...+.++++..+ ++.|.|.||.+....+++.|.+..+-..+.. +.--|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3444444443 33344455566666655 6899999999999999999987652223222 234589999999999
Q ss_pred HhhhhCC
Q psy13563 301 AGVLSGE 307 (577)
Q Consensus 301 a~~ls~~ 307 (577)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766443
No 73
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=65.74 E-value=3.4 Score=44.01 Aligned_cols=50 Identities=14% Similarity=-0.020 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCceeccccCcceeeeecccccccCCCcEEEEEeCCCCch
Q psy13563 113 RQATKDAGVIARTHRDENINEATGRGPSLMDWTRKKERRNVLVFDLGKDLR 163 (577)
Q Consensus 113 r~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~~~~~~~~~~vlV~D~Gggt~ 163 (577)
...+..+-+..|+++ .+|+-..=|.+.+.+....-.....+|+|+|||++
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGSt 152 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSL 152 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCE
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCce
Confidence 345666666789987 56666555554424433322223459999999999
No 74
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=65.51 E-value=24 Score=33.97 Aligned_cols=49 Identities=27% Similarity=0.183 Sum_probs=31.6
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCC-----------CCCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNN-----------KEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~-----------~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+.+.|+|.||.+..|.+.+.+++.+.. .++....-.+.+.++||+.++.
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 357899999887767666666554411 1222233446789999998774
No 75
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=62.04 E-value=22 Score=34.86 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=32.9
Q ss_pred CCCeEEEEeCCcCc-HHHHHHHHhHhC---------CCCCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRI-PKVQQLVKEFFN---------NKEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssri-p~v~~~l~~~f~---------~~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+.+.|+|-||.++. +.+.+.|++.+. ...+..+.-.+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 35889999998876 666555555441 12334444567899999998773
No 76
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=58.89 E-value=47 Score=27.07 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy13563 513 EKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAPP 566 (577)
Q Consensus 513 ~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~ 566 (577)
++..+...|++-.+-++. ..+.++.++..++.....+...+++..+++|+
T Consensus 67 ~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~~~~ 116 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRPPTA 116 (117)
T ss_dssp CHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred cHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 444555555555555533 45678899999999999999999999888553
No 77
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=57.35 E-value=23 Score=34.37 Aligned_cols=50 Identities=20% Similarity=0.169 Sum_probs=35.5
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCC-----CCCCCCCchhHHHhHHHHHHhh
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNK-----EPSRGVNPDEAVAYGAAVQAGV 303 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~-----~i~~~~~p~~aVa~GAa~~a~~ 303 (577)
+++.|+|-||.+..|.+.+.|++.+... .+....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4588999999998887778888777321 1222334567999999987753
No 78
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=56.58 E-value=24 Score=34.79 Aligned_cols=82 Identities=11% Similarity=0.007 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeccccCcce
Q psy13563 73 APEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDA----------------QRQATKDAGVIARTHRDENINEATG 136 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~----------------qr~a~~~Aa~~AGl~~~~li~Ep~A 136 (577)
+++++...+...+.+..... + .+..+.|++|...+.. -++.+.+ ..|++ +.+.|+..|
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~-~-~~~gigi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-V~v~NDa~a 132 (327)
T 4db3_A 59 DYPLLLETIAGLVAKYDQEF-A-CEGKIGLGLPGMEDADDATVLTVNVPAAKGKPLRADLEA---KIGRS-VKIENDANC 132 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESEEECTTTCCEEESSSGGGTTSCHHHHHHH---HHSSC-CEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeccEeCCCCEEEcCCCccccCCCHHHHHHH---HHCCC-EEEecchhH
Confidence 56777776666666554432 2 3567788888755421 1333333 34776 579999999
Q ss_pred eeeecccccccCCCcEEEEEeCCC
Q psy13563 137 RGPSLMDWTRKKERRNVLVFDLGK 160 (577)
Q Consensus 137 Aa~~~y~~~~~~~~~~vlV~D~Gg 160 (577)
||++.+.........+++++-+|-
T Consensus 133 aalgE~~~g~~~~~~~~~~l~~Gt 156 (327)
T 4db3_A 133 FALSEAWDEELQDAPSVMGLILGT 156 (327)
T ss_dssp HHHHHHTSTTTTTCSEEEEEEESS
T ss_pred HHHHHHHhCCCCCCCcEEEEEeCc
Confidence 998732222222345666666663
No 79
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=56.27 E-value=35 Score=33.25 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CCccccEEEEeCCCCCH-----------------HHHHHHHHHHHHcCCceeccccC
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GKKVTHAVVTVPAYFND-----------------AQRQATKDAGVIARTHRDENINE 133 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~~~~~~VitVPa~f~~-----------------~qr~a~~~Aa~~AGl~~~~li~E 133 (577)
+++++...+...+.+.....- ..++..+.|++|...+. .-++.+.+. .|++ +.+.|+
T Consensus 42 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~---~~~p-v~v~ND 117 (326)
T 2qm1_A 42 DGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESA---LGIP-FALDND 117 (326)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHH---HCSC-EEEEEH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHH---hCCC-EEEecH
Confidence 567777776666666554421 12466778888885422 112333332 3666 578999
Q ss_pred cceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 134 ATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 134 p~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
..|||++.+.........+++++-+|.|
T Consensus 118 ~~aaa~~e~~~g~~~~~~~~~~l~~GtG 145 (326)
T 2qm1_A 118 ANVAALGERWKGAGENNPDVIFITLGTG 145 (326)
T ss_dssp HHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 9999886221111122345666666644
No 80
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=55.61 E-value=4.2 Score=43.35 Aligned_cols=88 Identities=18% Similarity=0.126 Sum_probs=50.5
Q ss_pred eeecHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHH------HHHHHHHHHcCCceeccccCcceeeeeccc
Q psy13563 70 KIFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQR------QATKDAGVIARTHRDENINEATGRGPSLMD 143 (577)
Q Consensus 70 ~~~~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr------~a~~~Aa~~AGl~~~~li~Ep~AAa~~~y~ 143 (577)
..+++ +.....+..|+...+...+..+..+.+ .-|..-| ..+..+-+..|+++ .+|+...=|.+.+.+
T Consensus 55 g~Ls~-eai~r~~~~L~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~g 128 (513)
T 1u6z_A 55 NMLSE-EAMTRGLNCLSLFAERLQGFSPASVCI----VGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMG 128 (513)
T ss_dssp CCBCH-HHHHHHHHHHHHHHHHTTTCCGGGEEE----EECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHH
T ss_pred CCcCH-HHHHHHHHHHHHHHHHHHhCCCCEEEE----EecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHH
Confidence 34554 455666667776666554555554322 1244444 34555555679887 566666555554234
Q ss_pred ccccC-CCcEEEEEeCCCCch
Q psy13563 144 WTRKK-ERRNVLVFDLGKDLR 163 (577)
Q Consensus 144 ~~~~~-~~~~vlV~D~Gggt~ 163 (577)
....- .....+|+|+|||++
T Consensus 129 v~~~~~~~~~~lviDIGGGSt 149 (513)
T 1u6z_A 129 VEHTQPEKGRKLVIDIGGGST 149 (513)
T ss_dssp HHHHSCCCSCEEEEEECSSCE
T ss_pred HHhhccCCCCEEEEEECCCcE
Confidence 33221 122689999999999
No 81
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=52.47 E-value=20 Score=34.39 Aligned_cols=48 Identities=21% Similarity=0.218 Sum_probs=32.8
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCC------CCCCCCCchhHHHhHHHHHH
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNK------EPSRGVNPDEAVAYGAAVQA 301 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~------~i~~~~~p~~aVa~GAa~~a 301 (577)
+++.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 3478888888887787888888776322 12222334678999999876
No 82
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=52.08 E-value=39 Score=33.05 Aligned_cols=83 Identities=13% Similarity=0.162 Sum_probs=49.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeccccCcc
Q psy13563 72 FAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDA----------------QRQATKDAGVIARTHRDENINEAT 135 (577)
Q Consensus 72 ~~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~----------------qr~a~~~Aa~~AGl~~~~li~Ep~ 135 (577)
.+|+++...+...+.+.... .++..+.|++|...+.. -++.+.+ ..|++ +.+.|+..
T Consensus 35 ~~~~~~~~~i~~~i~~~~~~---~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~---~~~~p-v~v~NDa~ 107 (321)
T 3vgl_A 35 PTAEGIVDAICAAVAGASEG---HDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQ---RVGLP-VVVENDAN 107 (321)
T ss_dssp SSHHHHHHHHHHHHHHHHTT---CCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHH---HHCSC-EEEEEHHH
T ss_pred CCHHHHHHHHHHHHHHHHhh---cCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhh---hhCCC-EEEEehhh
Confidence 35777776666666554322 36778889998865432 1233333 34776 57999999
Q ss_pred eeeeecccccccCCCcEEEEEeCCCC
Q psy13563 136 GRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 136 AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
|||++.+.........+++++-+|.|
T Consensus 108 aaal~E~~~g~~~~~~~~~~l~~GtG 133 (321)
T 3vgl_A 108 AAAWGEYRFGAGQGHDDVICITLGTG 133 (321)
T ss_dssp HHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred hHHHHHHHhCCCCCCCCEEEEEeCcc
Confidence 99987322222223455666666643
No 83
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=49.18 E-value=42 Score=32.58 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHH-----------------HHHHHHHHHHHcCCceeccccCccee
Q psy13563 75 EEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDA-----------------QRQATKDAGVIARTHRDENINEATGR 137 (577)
Q Consensus 75 eev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~-----------------qr~a~~~Aa~~AGl~~~~li~Ep~AA 137 (577)
+++...+...+.+..... ..++..+.|++|...+.. -++.+. +..|+++ .+.|+..||
T Consensus 37 ~~~~~~i~~~i~~~~~~~-~~~i~gigi~~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~---~~~~~pv-~v~NDa~aa 111 (302)
T 3vov_A 37 ERVAEALAEAAERAEREA-GVRGEAIGLGTPGPLDFRRGVIRFAPNIPGVQDFPIRRILE---EATGRPV-FLENDANAA 111 (302)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCCSSEEEEESSCEETTTTEEC---CCTTCTTCCHHHHHH---HHHSSCE-EEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc-cCCceEEEEEecccEeCCCCEEEcCCCCCCcCCCChHHHHH---HhhCCCE-EEEechHHH
Confidence 555555555444443332 457888888888765321 122222 2346664 689999999
Q ss_pred eeecccccccCCCcEEEEEeCCC
Q psy13563 138 GPSLMDWTRKKERRNVLVFDLGK 160 (577)
Q Consensus 138 a~~~y~~~~~~~~~~vlV~D~Gg 160 (577)
|++.+.........+++++-+|-
T Consensus 112 al~E~~~g~~~~~~~~~~l~~Gt 134 (302)
T 3vov_A 112 ALAEHHLGAAQGEESSLYLTVST 134 (302)
T ss_dssp HHHHHHHSTTTTCSCEEEEEESS
T ss_pred HHHHHHhCCCCCCCCEEEEEECC
Confidence 98732222222344666666663
No 84
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=45.53 E-value=17 Score=35.39 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcC--cHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHh
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTR--IPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssr--ip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
.+..++++....+-..+...-. . +.+.|+|.||-+. .|.+.+.+++.+ . .|+.+.+.||++++.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3445666666666666555432 2 6788999998864 566777777654 1 256788999999874
No 85
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=44.73 E-value=17 Score=34.61 Aligned_cols=152 Identities=11% Similarity=0.078 Sum_probs=72.2
Q ss_pred CccccEEEEeCCCCCHHHHHHHHHHHHH-cCCceeccccCcc-eeeeeccccccc--------------CCCcEEEEEeC
Q psy13563 95 KKVTHAVVTVPAYFNDAQRQATKDAGVI-ARTHRDENINEAT-GRGPSLMDWTRK--------------KERRNVLVFDL 158 (577)
Q Consensus 95 ~~~~~~VitVPa~f~~~qr~a~~~Aa~~-AGl~~~~li~Ep~-AAa~~~y~~~~~--------------~~~~~vlV~D~ 158 (577)
.++..++|+.|+ +.....++.+++. .+..++.+ ..++ ..-.. |..... .-+..++|+|+
T Consensus 55 ~~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v-~~~~~gl~~~-y~~P~~lG~DR~~~~~aa~~~~~~~~iVvD~ 129 (249)
T 3bex_A 55 REIKGIGVASVV---PTQNTVIERFSQKYFHISPIWV-KAKNGCVKWN-VKNPSEVGADRVANVVAFVKEYGKNGIIIDM 129 (249)
T ss_dssp GGEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEEC-CCCSSSSEEC-SSCGGGSCHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred ccCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEE-EccCCCceec-cCChhhcCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 357788898775 4555555555553 35544333 3333 11122 321100 01457999999
Q ss_pred CCCchhHHHHHHH-HhCCCcccCHHHHHH-HHHHHHHHhHHcCCCceEEEeeccccCCCcceEeeeHHHHHHHHHHHHHH
Q psy13563 159 GKDLRKDKRTVQK-LRRKDLRKDKRTVQK-LRREVEKAKRALSSNFQVKIEIESFFEGDDFSETLTRAKFEELNMDLFRA 236 (577)
Q Consensus 159 Gggt~~D~~l~~~-~~~~~~~~~~~~~~~-l~~~~e~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~ 236 (577)
|-.|+||.. ... ..|--+......+.+ |...+. .| +... +. .....+-++.-+.+-..++..
T Consensus 130 GTA~T~d~v-~~g~~lGG~I~PGi~l~~~aL~~~ta----~L---p~v~--~~------~~~~~~g~nT~~ai~sGi~~g 193 (249)
T 3bex_A 130 GTATTVDLV-VNGSYEGGAILPGFFMMVHSLFRGTA----KL---PLVE--VK------PADFVVGKDTEENIRLGVVNG 193 (249)
T ss_dssp SSEEEEEEE-ETTEEEEEEEEECHHHHHHHHHHTCS----SC---CCCC--CC------CCCSSSBSSHHHHHHHHHHHH
T ss_pred CCceEEEEE-eCCeEeeEEECccHHHHHHHHHHhhh----cC---CCCc--cc------CCCCCCCCCHHHHHHHHHHHH
Confidence 999997755 311 112222222222211 111110 11 1111 11 011234556666666666655
Q ss_pred HHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcH
Q psy13563 237 TMKPVQKVLEDADMNKKDVDEIVLVGGSTRIP 268 (577)
Q Consensus 237 ~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip 268 (577)
....|+.++++..-.. .--.|+++||.+.+-
T Consensus 194 ~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~l 224 (249)
T 3bex_A 194 SVYALEGIIGRIKEVY-GDLPVVLTGGQSKIV 224 (249)
T ss_dssp HHHHHHHHHHHHHHHH-CCCCEEEESTTSGGG
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECCChHHH
Confidence 5555555544321111 124799999987653
No 86
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=44.58 E-value=52 Score=33.17 Aligned_cols=49 Identities=24% Similarity=0.219 Sum_probs=33.5
Q ss_pred CCCeEEEEeCCcCcHH-HHHHHHhHhCCC---CCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRIPK-VQQLVKEFFNNK---EPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssrip~-v~~~l~~~f~~~---~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+++.|+|.||.+..+. +.+.+.+.+... .+........+.++||+.++.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5799999999987544 778887777322 122222334699999998763
No 87
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=44.04 E-value=22 Score=27.70 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=26.0
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q psy13563 100 AVVTVPAYFNDAQRQATKDAGVIARTHR 127 (577)
Q Consensus 100 ~VitVPa~f~~~qr~a~~~Aa~~AGl~~ 127 (577)
-.++.|+.|+..||..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5789999999999999999999999965
No 88
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=43.93 E-value=25 Score=34.24 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
+.....+.+...++++|+++++++++|+.|+.-|++.++ -+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344456677889999999999999999999999998765 456778884
No 89
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=42.43 E-value=94 Score=26.94 Aligned_cols=48 Identities=6% Similarity=0.203 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13563 512 AEKTTMEEAIDDKIKWLDEN---QDADAPEFQKKKKELEDVVQPIIAKLYQ 559 (577)
Q Consensus 512 ~~~~~i~~~l~e~~~Wl~~~---~~~~~~~~~~kl~~L~~~~~~i~~r~~e 559 (577)
++|..+..+|..+....... .....++|+.|++.+.+....+...+..
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35677888888777766655 2346778999999998888887776643
No 90
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=42.12 E-value=9.8 Score=36.96 Aligned_cols=68 Identities=6% Similarity=-0.109 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcC-CCCeEEEEeCCcCc--HHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHhh
Q psy13563 228 ELNMDLFRATMKPVQKVLEDADMNKK-DVDEIVLVGGSTRI--PKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAGV 303 (577)
Q Consensus 228 ~~~~~~~~~~~~~i~~~l~~~~~~~~-~i~~V~lvGGssri--p~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~~ 303 (577)
.....++++....+-..+ . +..- +.+.|+|.||-++. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC--Cee---cccCcCHHHHHHHHHHh
Confidence 345556666666666666 2 2222 56899999998876 66777766543 112 23568899999998853
No 91
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=41.56 E-value=69 Score=32.14 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CCccccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeccccCc
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GKKVTHAVVTVPAYFNDA----------------QRQATKDAGVIARTHRDENINEA 134 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~~~~~~VitVPa~f~~~----------------qr~a~~~Aa~~AGl~~~~li~Ep 134 (577)
+++++...+...+.+.....- ..++..+.|++|...+.. -+..+.+. .|++ +.+.|+.
T Consensus 123 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDa 198 (380)
T 2hoe_A 123 DREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDA 198 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechH
Confidence 577777777666666544331 346778889999865421 12223332 4775 5789999
Q ss_pred ceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 135 TGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 135 ~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
.|||++.+..... . .+++++-+|.|
T Consensus 199 naaalaE~~~g~~-~-~~~v~l~~GtG 223 (380)
T 2hoe_A 199 DMGAVGEKWYTKR-D-DSFAWILTGKG 223 (380)
T ss_dssp HHHHHHHHHHTTC-C-SCEEEEEESSS
T ss_pred HHHHHHHHHhCCC-C-CcEEEEEeCCc
Confidence 9999872211111 2 56666666644
No 92
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=39.27 E-value=81 Score=30.63 Aligned_cols=49 Identities=22% Similarity=0.324 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCcCc-----HHHHHHHHhHhCCC------CCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRI-----PKVQQLVKEFFNNK------EPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssri-----p~v~~~l~~~f~~~------~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+.+.|+|-||.+.. +.+++.+++.+... ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46889999988765 46777777765211 122222346899999998774
No 93
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=38.02 E-value=34 Score=33.08 Aligned_cols=45 Identities=22% Similarity=0.285 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 232 DLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 232 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
...+.+...++++|++++++++||+.|++-|+++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 445577788999999999999999999999998765 345777774
No 94
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=37.46 E-value=33 Score=33.52 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
......+...++++|++++++++||+.|+.-|++.++ -+.+.+.|+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445677788999999999999999999999988664 345777774
No 95
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=36.26 E-value=15 Score=39.97 Aligned_cols=24 Identities=29% Similarity=0.672 Sum_probs=22.3
Q ss_pred CCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 255 VDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 255 i~~V~lvGGssrip~v~~~l~~~f 278 (577)
-+.|++|||+|.+|.+.-.|.+.+
T Consensus 501 y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHH
Confidence 478999999999999999999988
No 96
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=35.92 E-value=38 Score=36.03 Aligned_cols=41 Identities=20% Similarity=0.425 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 233 LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 233 ~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
+++.+...+.++++..+ ++.|+|+||.+....+++.+.+.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 44455556667766665 479999999999999999999976
No 97
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=34.45 E-value=29 Score=34.07 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHH----------------HHHHHHHHHHcCCceeccccCcce
Q psy13563 73 APEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQ----------------RQATKDAGVIARTHRDENINEATG 136 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~q----------------r~a~~~Aa~~AGl~~~~li~Ep~A 136 (577)
+++++...+...+.+..... + .+..+.|++|...+... ++.+.+ ..|++ +.+.|+..|
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~-~-~i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-v~v~NDa~a 132 (327)
T 2ap1_A 59 SYSAFLDAVCELVEEADQRF-G-VKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSA---RLDRD-VRLDNDANC 132 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHH---HHTSC-EEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHH---HHCCC-EEEecHHHH
Confidence 46666666555555443322 2 36678899998654311 122222 24666 578999999
Q ss_pred eeeecccccccCCCcEEEEEeCCCC
Q psy13563 137 RGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 137 Aa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
||++.+.........+++++-+|-|
T Consensus 133 aalgE~~~g~~~~~~~~v~l~~GtG 157 (327)
T 2ap1_A 133 FALSEAWDDEFTQYPLVMGLILGTG 157 (327)
T ss_dssp HHHHHHTSTTGGGCSEEEEEEESSS
T ss_pred HHHHHHHhCcCCCCCcEEEEEECCc
Confidence 9886222222123456666666644
No 98
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=32.93 E-value=62 Score=32.35 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=35.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHHHH----------HHHHHHHH-cCCceeccccCcceeeee
Q psy13563 73 APEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ----------ATKDAGVI-ARTHRDENINEATGRGPS 140 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~qr~----------a~~~Aa~~-AGl~~~~li~Ep~AAa~~ 140 (577)
+++++...+...+.+..... ...+..+.|++|...+..... .+.+..+. .|+..+.+.|+..|||++
T Consensus 67 ~~~~~~~~i~~~i~~~~~~~-~~~i~gigi~~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 67 DITEIIEFFNEIIELMPASV-MKRVKAGVINVPGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp BGGGHHHHHHHHHHHSCHHH-HTTEEEEEEEESSCEETTTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcc-cccccEEEEEeeccccCCEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhcc
Confidence 45666666666555432221 134667888888865431000 11111111 344346788888888875
No 99
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=29.73 E-value=83 Score=30.46 Aligned_cols=49 Identities=22% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCcCc----HHHHHHHHhHhCC------------CCCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRI----PKVQQLVKEFFNN------------KEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssri----p~v~~~l~~~f~~------------~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+++.|+|-||-++. +.+++.+.+.... ..+....-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 46889998888775 4566666655411 0122233456799999998774
No 100
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=29.66 E-value=38 Score=33.41 Aligned_cols=46 Identities=15% Similarity=0.128 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
....+.+...++++|+++++++++|+.|+.-|++.++ -+.+.+.|+
T Consensus 227 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 272 (339)
T 1mzj_A 227 RWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLG 272 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhC
Confidence 3345677888999999999999999999999988764 345677773
No 101
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=29.36 E-value=43 Score=32.43 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
......+...++++|++++++++||+.|++-++++++- +.+.+.|+
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg 253 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhC
Confidence 34556777889999999999999999999999886543 45667773
No 102
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=29.22 E-value=40 Score=33.07 Aligned_cols=46 Identities=20% Similarity=0.269 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhC
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 279 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~ 279 (577)
.-..+.+...++++|++++++++||+.|++-+++.++ -+.+.+.|+
T Consensus 220 ~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 265 (331)
T 2x3e_A 220 GQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLD 265 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445677788999999999999999999999998765 345667773
No 103
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=28.54 E-value=17 Score=36.50 Aligned_cols=39 Identities=13% Similarity=0.060 Sum_probs=23.4
Q ss_pred CCceeccccCcceeeeec----cccccc--CCCcEEEEEeCCCCch
Q psy13563 124 RTHRDENINEATGRGPSL----MDWTRK--KERRNVLVFDLGKDLR 163 (577)
Q Consensus 124 Gl~~~~li~Ep~AAa~~~----y~~~~~--~~~~~vlV~D~Gggt~ 163 (577)
|+.+ ++|+-..=|.++| |.+... ....+++|+|+|||++
T Consensus 108 g~~v-~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGSt 152 (353)
T 3aap_A 108 LVEA-KTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASV 152 (353)
T ss_dssp EEEE-EECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEE
T ss_pred CCeE-EECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCce
Confidence 6654 5666555444442 333221 2235799999999999
No 104
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=28.44 E-value=2.9e+02 Score=23.95 Aligned_cols=110 Identities=14% Similarity=0.127 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHH---HHHHHHHhhhhhhhcc-CC----CHHHHHHHHHHH----HH
Q psy13563 457 TPDDIDRMIKDAEKFADDDKKLKE-RVEARNELESY---AYSLKNQLQDKDKLGA-KI----TDAEKTTMEEAI----DD 523 (577)
Q Consensus 457 s~e~i~~~~~~~~~~~~~D~~~~~-~~~a~N~lE~~---i~~~r~~l~~~~~~~~-~~----~~~~~~~i~~~l----~e 523 (577)
+++++++..+-++.|...|..+.+ ....+++|+.. +--+...|.. +.+ .. ..+-...+-..+ ..
T Consensus 30 ~PeDL~~AN~LiK~m~~~d~~r~e~~~k~~seLe~V~~nv~LL~EML~~---~~pg~~~~~~d~Ell~eL~~~Ck~~qp~ 106 (158)
T 1naf_A 30 HPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMS---HSQGGAAAGSSEDLMKELYQRCERMRPT 106 (158)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTC-----CCTTHHHHHHHHHHTHHHH
T ss_pred ChhhHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCcCCCcccHHHHHHHHHHHHHHHHH
Confidence 456676666666677666655433 33455555544 2222333332 111 00 112222233333 34
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q psy13563 524 KIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAPPPPGGD 571 (577)
Q Consensus 524 ~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~~~~~~ 571 (577)
+..|+.+. .+-+++-.++=+++..+..++.||+...+|.+++++.-
T Consensus 107 i~~Li~e~--~ddee~L~elL~~ND~Ln~vl~kY~~~~~g~~~~~~~~ 152 (158)
T 1naf_A 107 LFRLASDT--EDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDAT 152 (158)
T ss_dssp HHHHHHHC--CSCHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHc--cCCHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCccc
Confidence 45666542 24466788888999999999999999988877766543
No 105
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=28.42 E-value=1.5e+02 Score=20.45 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy13563 512 AEKTTMEEAIDDKIKWLDEN 531 (577)
Q Consensus 512 ~~~~~i~~~l~e~~~Wl~~~ 531 (577)
.+.+--.+.+.++++||...
T Consensus 44 qeveiwtnrikeledwlwge 63 (67)
T 2nr5_A 44 QEVEIWTNRIKELEDWLWGE 63 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhcC
Confidence 44566678899999999865
No 106
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=28.08 E-value=1.1e+02 Score=33.21 Aligned_cols=59 Identities=17% Similarity=0.303 Sum_probs=45.1
Q ss_pred cceEeeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHH
Q psy13563 216 DFSETLTRAKFEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 275 (577)
Q Consensus 216 ~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~ 275 (577)
.-.+.||..+..++..- -..+..-++-+|+.+|++.++|+.|+|.||+..-=-+.+.+.
T Consensus 497 ~~~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 497 NKDIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SSCEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CCcEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 34588999999987432 234556677888999999999999999999987666666553
No 107
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=27.26 E-value=1.1e+02 Score=30.23 Aligned_cols=43 Identities=19% Similarity=0.318 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCcCCCCeEEEEeCCc--CcHHHHHHHHhHhC
Q psy13563 237 TMKPVQKVLEDADMNKKDVDEIVLVGGST--RIPKVQQLVKEFFN 279 (577)
Q Consensus 237 ~~~~i~~~l~~~~~~~~~i~~V~lvGGss--rip~v~~~l~~~f~ 279 (577)
.....+++|+++++++++||.|+++.-+. .+|..--.|.+.+|
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhC
Confidence 35677899999999999999999876554 57999999999995
No 108
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=26.91 E-value=1.2e+02 Score=29.63 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=32.8
Q ss_pred CCCeEEEEeCCcCcHHHHHHHHhHhCCC--------CCCCCCCchhHHHhHHHHHH
Q psy13563 254 DVDEIVLVGGSTRIPKVQQLVKEFFNNK--------EPSRGVNPDEAVAYGAAVQA 301 (577)
Q Consensus 254 ~i~~V~lvGGssrip~v~~~l~~~f~~~--------~i~~~~~p~~aVa~GAa~~a 301 (577)
+++.|+|-||.+..+.+.+.|++.+... ++....-.+.+.++|||.++
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4578999999888877777777766221 11222234689999999765
No 109
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=26.70 E-value=36 Score=33.56 Aligned_cols=68 Identities=3% Similarity=-0.105 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CC-ccccEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeccccCcceeeee
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GK-KVTHAVVTVPAYFNDAQRQATKDAGVIA-R--THRDENINEATGRGPS 140 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~-~~~~~VitVPa~f~~~qr~a~~~Aa~~A-G--l~~~~li~Ep~AAa~~ 140 (577)
+++++...+...+.+..+... .. ++..+.|++|...+......+.+..+.. | .-.+.+.|+..|||++
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 567777777766666554431 12 5788999999999876555666555443 3 1345789999999887
No 110
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.35 E-value=12 Score=36.38 Aligned_cols=68 Identities=4% Similarity=-0.068 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHHHHh
Q psy13563 230 NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 230 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
...++++....+-..+ ...+ ..+.+.|+|.||-+.. +.+.|++.+.. .......+..+.+.||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHHH
Confidence 3345555555555555 2221 1256889998888765 55666666632 111112345788899998763
No 111
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=25.69 E-value=1e+02 Score=30.23 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHH
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQ 272 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~ 272 (577)
......+.+...++++|++++++..|||.|....|-...+.++-
T Consensus 43 ~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrv 86 (330)
T 2ivn_A 43 AAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRV 86 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHH
Confidence 34556677888999999999999999999998777776666543
No 112
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=24.66 E-value=87 Score=30.68 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
+.+...+.+...++++|++++++++||+.+++-.++.++ -+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 344556777888999999999999999999999888653 46676777
No 113
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=24.63 E-value=1.8e+02 Score=28.32 Aligned_cols=85 Identities=14% Similarity=0.074 Sum_probs=44.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CCccccEEEEeCCCCCH-----------------H-HHHHHHHHHHHcCCceecccc
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GKKVTHAVVTVPAYFND-----------------A-QRQATKDAGVIARTHRDENIN 132 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~~~~~~VitVPa~f~~-----------------~-qr~a~~~Aa~~AGl~~~~li~ 132 (577)
+++++...+...+.+...... ..++..+.|++|...+. . -++.+.+. .|++ +.+.|
T Consensus 64 ~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~---~~~p-v~v~N 139 (343)
T 2yhw_A 64 TYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDT---LHLP-VWVDN 139 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHH---HCSC-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHH---HCCC-EEEec
Confidence 466666666666655543321 23455666666654221 1 12333332 3666 47899
Q ss_pred CcceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 133 EATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 133 Ep~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
+..|||++.+.........+++++-+|-|
T Consensus 140 Da~aaal~E~~~g~~~~~~~~v~i~~GtG 168 (343)
T 2yhw_A 140 DGNCAALAERKFGQGKGLENFVTLITGTG 168 (343)
T ss_dssp HHHHHHHHHHHTSTTTTCSCEEEEEESSS
T ss_pred hhHHHHHHHHHhCCCCCCCcEEEEEECCC
Confidence 99999987221111122345666666643
No 114
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=24.20 E-value=1.1e+02 Score=30.27 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHH
Q psy13563 230 NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLV 274 (577)
Q Consensus 230 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l 274 (577)
.....+.+...|+++|++++++..|||.|.+.-|-...+.++--+
T Consensus 49 ~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 49 AVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 345567788899999999999999999999999888888776544
No 115
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.19 E-value=53 Score=32.10 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 232 DLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 232 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
.....+...++++|++++++++|||.+++-++++++- +.+.+.|
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~l 272 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHc
Confidence 3456777889999999999999999999999887653 3455666
No 116
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=24.16 E-value=82 Score=28.96 Aligned_cols=66 Identities=21% Similarity=0.272 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhH----hCCCCCCCCCCchhHHHhHHH
Q psy13563 233 LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF----FNNKEPSRGVNPDEAVAYGAA 298 (577)
Q Consensus 233 ~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~----f~~~~i~~~~~p~~aVa~GAa 298 (577)
..+.+...|+++|++++++..+||.|.+.=|-.....+|=-+.-. +.-..+...++..++.|.++.
T Consensus 35 Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~~ 104 (213)
T 3r6m_A 35 HTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASY 104 (213)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhhh
Confidence 446677789999999999999999999999988888887654321 111223344555566665543
No 117
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=23.70 E-value=2.3e+02 Score=21.12 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=22.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy13563 466 KDAEKFADDDKKLKERVEARNELESYAYSLKNQLQD 501 (577)
Q Consensus 466 ~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~ 501 (577)
++.+++...|...++....-...++.|-.+++.|..
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666666667777777766643
No 118
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=23.67 E-value=1.3e+02 Score=30.19 Aligned_cols=85 Identities=7% Similarity=0.069 Sum_probs=45.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CCccccEEEEeCCC----------------CCH-HHHHHHHHHHHHcCCceeccccC
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GKKVTHAVVTVPAY----------------FND-AQRQATKDAGVIARTHRDENINE 133 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~~~~~~VitVPa~----------------f~~-~qr~a~~~Aa~~AGl~~~~li~E 133 (577)
+|+++...+...+.+.....- ..++..+.|++|.. |.. .-++.+.+. .|++ +.+.|+
T Consensus 120 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~---~~~p-v~v~ND 195 (406)
T 1z6r_A 120 DDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQH---TGVP-VYIQHD 195 (406)
T ss_dssp CSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHH---HSSC-EEEEEH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHH---HCCC-EEEech
Confidence 456666666666655544321 23466677777764 322 112333332 4776 478999
Q ss_pred cceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 134 ATGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 134 p~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
..|||++.+.........+++++-+|.|
T Consensus 196 a~aaalaE~~~g~~~~~~~~v~l~~GtG 223 (406)
T 1z6r_A 196 ISAWTMAEALFGASRGARDVIQVVIDHN 223 (406)
T ss_dssp HHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred hHHHHHHHHHhcCCCCCCcEEEEEECCc
Confidence 9999987222222122345666666643
No 119
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=23.64 E-value=2e+02 Score=28.87 Aligned_cols=54 Identities=11% Similarity=0.207 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 226 FEELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 226 fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
.+.......+=....++++|+++|+++++||.|++...+ ..+|.+-..|...+|
T Consensus 95 ~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LG 149 (393)
T 3ov2_A 95 QDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLG 149 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcC
Confidence 334445556666778889999999999999998876543 357888888888884
No 120
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=23.61 E-value=53 Score=32.06 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=30.4
Q ss_pred CCCeEEEEeCCcCc-HHHHHHHHhHhC----------CCCCCCCCCchhHHHhHHHHHHh
Q psy13563 254 DVDEIVLVGGSTRI-PKVQQLVKEFFN----------NKEPSRGVNPDEAVAYGAAVQAG 302 (577)
Q Consensus 254 ~i~~V~lvGGssri-p~v~~~l~~~f~----------~~~i~~~~~p~~aVa~GAa~~a~ 302 (577)
+++.|+|.||.++. +++.+.|++.+. ..++....-.+.+.++|||.++.
T Consensus 252 ~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 252 DPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp CCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 35789999988875 554444444331 01223333467899999998764
No 121
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=23.57 E-value=3.4e+02 Score=24.18 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy13563 478 LKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKL 557 (577)
Q Consensus 478 ~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~ 557 (577)
.....+.|..|+-|.-.++..+..+ -++-|..+.-...++...+ ..++++|+..+.|...++
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l~~~-------~Eelr~~L~Py~eelr~kl-----------~~~~eeLr~~l~P~~eel 166 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAMLGQS-------TEELRVRLASHLRKLRKRL-----------LRDADDLQKRLAVYQAGA 166 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCC-------CHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH-------HHHHHHHhhhhHHHHHHHH-----------HHHHHHHHHHhHHHHHHH
Confidence 4445667777777777777776543 2334444444444444443 334455555555555444
Q ss_pred Hh
Q psy13563 558 YQ 559 (577)
Q Consensus 558 ~e 559 (577)
.+
T Consensus 167 k~ 168 (191)
T 1nfn_A 167 RE 168 (191)
T ss_dssp --
T ss_pred HH
Confidence 43
No 122
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=23.54 E-value=3.4e+02 Score=27.13 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 227 EELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 227 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
+.......+=....++++|+++|+++++||.|++...+ ..+|.+-..|...+|
T Consensus 90 ~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 143 (387)
T 3oit_A 90 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLG 143 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhC
Confidence 33444555666778889999999999999999886443 246778888888884
No 123
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=23.50 E-value=1.8e+02 Score=27.15 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy13563 511 DAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAK 556 (577)
Q Consensus 511 ~~~~~~i~~~l~e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r 556 (577)
++-|..+...+.++..|+...-..-.+.+....++|+..+.|....
T Consensus 168 ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e~ 213 (243)
T 2a01_A 168 DELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALED 213 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4555666777777777775541111122444455555555444443
No 124
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=22.66 E-value=90 Score=29.00 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHh---H-hCCCCCCCCCCchhHHHhHHH
Q psy13563 233 LFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE---F-FNNKEPSRGVNPDEAVAYGAA 298 (577)
Q Consensus 233 ~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~---~-f~~~~i~~~~~p~~aVa~GAa 298 (577)
..+.+...|+++|++++++..+||.|.+.=|-.....++--+.- . +.-..+...++..++.|..+.
T Consensus 34 h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~l~a~a~~~~ 103 (231)
T 2gel_A 34 HTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAW 103 (231)
T ss_dssp CHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHHHHHh
Confidence 34557788999999999999999999998887777777633211 1 111223344555556555543
No 125
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=22.40 E-value=3e+02 Score=27.60 Aligned_cols=50 Identities=8% Similarity=0.199 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 230 NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 230 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
.....+=....++++|+++++.+.+||.|++...+ ...|.+...|...+|
T Consensus 112 ~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (402)
T 3awk_A 112 VLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLG 162 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcC
Confidence 34555566778889999999999999998875432 257778888888884
No 126
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=22.10 E-value=4.5e+02 Score=24.90 Aligned_cols=18 Identities=28% Similarity=0.521 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy13563 483 EARNELESYAYSLKNQLQ 500 (577)
Q Consensus 483 ~a~N~lE~~i~~~r~~l~ 500 (577)
+.|..|..|.-+++..+.
T Consensus 70 elr~kL~p~~~el~~~l~ 87 (273)
T 3s84_A 70 QLRRQLTPYAQRMERVLR 87 (273)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 127
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=21.77 E-value=4.1e+02 Score=23.38 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCHHHHHHHHHHHHHHHHHH
Q psy13563 454 NRLTPDDIDRMIKDAEKFADDDKKLKERVEARNELESYAYSLKNQLQDKDKLGAKITDAEKTTMEEAIDDKIKWL 528 (577)
Q Consensus 454 ~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~~~~~~i~~~l~e~~~Wl 528 (577)
-.||+|+..++.+..+++..+ ..+.+.++.+.-.+++.++.. +...+...+.+.+.+.++..-|
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~------~~~Lr~ql~akr~EL~aL~~a-----~~~DeakI~aL~~Ei~~Lr~qL 129 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQ------TSALRQQLISKRYEYNALLTA-----SSPDTAKINAVAKEMESLGQKL 129 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHH
Confidence 469999988888766665432 222333333333344444322 3345555555555555555544
No 128
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=21.68 E-value=2.8e+02 Score=27.64 Aligned_cols=50 Identities=10% Similarity=0.233 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 230 NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 230 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
.+...+=....++++|+++++.+.+||.|++...+ ...|.+-..|...+|
T Consensus 99 ~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 149 (389)
T 1i88_A 99 VVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLG 149 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcC
Confidence 34555556777889999999999999998765432 246777788888884
No 129
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=21.58 E-value=53 Score=33.19 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
....+.+...++++|+++|++++|||.+++-+++.++ -+.+.+.+
T Consensus 283 ~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~l 327 (393)
T 1ted_A 283 GYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHc
Confidence 3456677788999999999999999999999988664 34566666
No 130
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=21.34 E-value=1.1e+02 Score=30.01 Aligned_cols=48 Identities=13% Similarity=0.069 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHh
Q psy13563 228 ELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 278 (577)
Q Consensus 228 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f 278 (577)
.+.+..++.+...++++|++++++++|||.+++-.++.++ .+.+.+.+
T Consensus 239 ~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~l 286 (345)
T 3s21_A 239 LLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---TAAFVKSF 286 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHc
Confidence 3445556677788899999999999999999999988663 46666666
No 131
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=21.29 E-value=2.2e+02 Score=28.48 Aligned_cols=50 Identities=6% Similarity=0.153 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 230 NMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 230 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
.+...+=....++++|+++++.+.+||.|++...+ ...|.....|...+|
T Consensus 95 ~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 95 VKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcC
Confidence 34555666778889999999999999998765432 256777888888884
No 132
>1o3x_A ADP-ribosylation factor binding protein GGA1; protein transport; 2.10A {Homo sapiens} SCOP: a.7.8.1 PDB: 1nwm_X 1x79_A
Probab=21.20 E-value=3.8e+02 Score=22.68 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy13563 523 DKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAPPP 567 (577)
Q Consensus 523 e~~~Wl~~~~~~~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~~ 567 (577)
.+..|+.+. .+-+++-.++=+++..+..++.||....+|.++.
T Consensus 97 ~i~~li~e~--~ddee~l~elL~~ND~ln~vl~kY~~~~~g~~~~ 139 (140)
T 1o3x_A 97 TLFRLASDT--EDNDEALAEILQANDNLTQVINLYKQLVRGEEVN 139 (140)
T ss_dssp HHHHHHTTC--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHHHHHc--cCCHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCC
Confidence 345566432 2446788888999999999999999988886654
No 133
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=21.11 E-value=1.5e+02 Score=28.92 Aligned_cols=45 Identities=11% Similarity=0.017 Sum_probs=29.4
Q ss_pred CCccccEEEEeCCCCCH-----------HHHHHHHHHHHHcCCceeccccCcceeeeec
Q psy13563 94 GKKVTHAVVTVPAYFND-----------AQRQATKDAGVIARTHRDENINEATGRGPSL 141 (577)
Q Consensus 94 ~~~~~~~VitVPa~f~~-----------~qr~a~~~Aa~~AGl~~~~li~Ep~AAa~~~ 141 (577)
+.++..+.|++|...+. ..++.+ .+..|++.+.+.|+..|+|++.
T Consensus 64 ~~~i~gigi~~pG~vd~~~~~~~nl~w~~~~~~l---~~~~~~p~V~v~NDanaaalgE 119 (332)
T 1sz2_A 64 KVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEM---KKNLGFSHLEIINDFTAVSMAI 119 (332)
T ss_dssp CCCCCEEEEEESSCCCSSEECCSSSCCCEEHHHH---HHHHTCSEEEEEEHHHHHHHHG
T ss_pred CCCccEEEEEEeCceeCCEEeeeCCCCcCCHHHH---HHHhCCCcEEEEeCHhHHhccc
Confidence 34677888888875431 112333 2335787568999999999873
No 134
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.87 E-value=1.3e+02 Score=30.56 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=47.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHh--CCccccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeccccCc
Q psy13563 73 APEEISAMVLGKMKETAEAYL--GKKVTHAVVTVPAYFNDA----------------QRQATKDAGVIARTHRDENINEA 134 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~--~~~~~~~VitVPa~f~~~----------------qr~a~~~Aa~~AGl~~~~li~Ep 134 (577)
+++++...+...+.+.....- ..++..+.|++|...+.. -++.+.+ ..|++ +.+.|+.
T Consensus 143 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~---~~~~p-V~v~NDa 218 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYK---ATGLP-VFVANDT 218 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHH---HHCSC-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHH---HhCCC-EEEechh
Confidence 467777777666666554421 234667778888754321 1223333 24776 4789999
Q ss_pred ceeeeecccccccCCCcEEEEEeCCCC
Q psy13563 135 TGRGPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 135 ~AAa~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
.|||++.+.........+++++-+|-|
T Consensus 219 ~aaalaE~~~g~~~~~~~~v~l~~GtG 245 (429)
T 1z05_A 219 RAWALAEKLFGHSQDVDNSVLISIHHG 245 (429)
T ss_dssp HHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 999987322222122345666666633
No 135
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=20.83 E-value=2.5e+02 Score=28.19 Aligned_cols=51 Identities=6% Similarity=0.184 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
..+...+=....++++|+++++.+.+||.|++...+ ...|.+...|...+|
T Consensus 103 ~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 154 (402)
T 1ee0_A 103 VVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLG 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcC
Confidence 344555566778889999999999999998765332 246777788888884
No 136
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=20.81 E-value=22 Score=37.09 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=12.3
Q ss_pred CcEEEEEeCCCCch
Q psy13563 150 RRNVLVFDLGKDLR 163 (577)
Q Consensus 150 ~~~vlV~D~Gggt~ 163 (577)
..+++|+|+|||++
T Consensus 189 ~~t~gvlDlGGgSt 202 (456)
T 3cj1_A 189 KGTLGAMDLGGAST 202 (456)
T ss_dssp CCCCEEEEECSSEE
T ss_pred CCceEEEEcCCCce
Confidence 45689999999999
No 137
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=20.69 E-value=2.4e+02 Score=28.06 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhCC
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFNN 280 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~~ 280 (577)
+...+=....++++|+++|+.+++||.|+++-.+ ..+|..-..|...+|-
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl 129 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGL 129 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCC
Confidence 4445556678889999999999999999876543 2478888889888843
No 138
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=20.40 E-value=2.7e+02 Score=28.10 Aligned_cols=51 Identities=14% Similarity=0.332 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 229 LNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 229 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
..+...+=....++++|+++++.+.+||.|++...+ ..+|.+...|...+|
T Consensus 121 ~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 172 (413)
T 1xes_A 121 LAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLG 172 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHT
T ss_pred HHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcC
Confidence 344555566778889999999999999998765433 246777778888884
No 139
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=20.26 E-value=1.3e+02 Score=28.21 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHHHHHhHhCCCCCCCCCCchhHHHhHHHH
Q psy13563 235 RATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNNKEPSRGVNPDEAVAYGAAV 299 (577)
Q Consensus 235 ~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~~l~~~f~~~~i~~~~~p~~aVa~GAa~ 299 (577)
+++.+.+.+.+++. .+|.|+| |++.+|.+.+.|++.+| . .-+|+-.+++.=+..
T Consensus 160 ~~l~~~~~~~~~~~-----gad~IVL--GCTh~p~l~~~i~~~~g-V---pvID~~~a~~~~~~~ 213 (245)
T 3qvl_A 160 EKVRERCIRALKED-----GSGAIVL--GSGGMATLAQQLTRELR-V---PVIDGVSAAVKMVES 213 (245)
T ss_dssp HHHHHHHHHHHHHS-----CCSEEEE--CCGGGGGGHHHHHHHHT-S---CEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCEEEE--CCCChHHHHHHHHHHcC-C---eEEccHHHHHHHHHH
Confidence 34444444444443 3577766 78899999999999994 2 335777776665553
No 140
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=20.25 E-value=90 Score=28.78 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCCcCcHHHHH
Q psy13563 231 MDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQ 272 (577)
Q Consensus 231 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGssrip~v~~ 272 (577)
....+.+...|+++|++++++..+||.|.+.-|-.....+|=
T Consensus 43 r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRi 84 (218)
T 2a6a_A 43 KKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRV 84 (218)
T ss_dssp GGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHH
Confidence 345567778899999999999999999999988877776654
No 141
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=20.23 E-value=1.2e+02 Score=30.76 Aligned_cols=45 Identities=7% Similarity=0.154 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCCCcCCCCeEEEEeCC--cCcHHHHHHHHhHhCC
Q psy13563 236 ATMKPVQKVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFNN 280 (577)
Q Consensus 236 ~~~~~i~~~l~~~~~~~~~i~~V~lvGGs--srip~v~~~l~~~f~~ 280 (577)
=....++++|+++++++++||.|++...+ ..+|..-..|...+|-
T Consensus 120 La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl 166 (392)
T 3led_A 120 MAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL 166 (392)
T ss_dssp HHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC
Confidence 34567788899999999999998875432 3568888888888843
No 142
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=20.22 E-value=29 Score=33.99 Aligned_cols=86 Identities=9% Similarity=0.001 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCccccEEEEeCCCCCHHH-------------HHHHHH-HHHHc-CCceeccccCccee
Q psy13563 73 APEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQ-------------RQATKD-AGVIA-RTHRDENINEATGR 137 (577)
Q Consensus 73 ~peev~a~~L~~l~~~ae~~~~~~~~~~VitVPa~f~~~q-------------r~a~~~-Aa~~A-Gl~~~~li~Ep~AA 137 (577)
+|++++..+.+.+.+... ...++..+.|++|...+... ...+.+ ..+.. |+++ .+.|+..||
T Consensus 55 ~~~~~~~~i~~~i~~~~~--~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV-~v~NDa~aa 131 (321)
T 3r8e_A 55 NGIGFVESMKLEIGNFLK--QYPIVKGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHF-KIENDAKCA 131 (321)
T ss_dssp TTTCHHHHHHHHHHHHHH--HCTTCCEEEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEE-EEEEHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh--ccCCeeEEEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCE-EEEchHHHH
Confidence 345566555555544433 24567788888887554210 011111 22334 6664 789999999
Q ss_pred eeecccccccCCCcEEEEEeCCCC
Q psy13563 138 GPSLMDWTRKKERRNVLVFDLGKD 161 (577)
Q Consensus 138 a~~~y~~~~~~~~~~vlV~D~Ggg 161 (577)
|++.+.........+++++-+|.|
T Consensus 132 alaE~~~g~~~~~~~~v~l~~GtG 155 (321)
T 3r8e_A 132 ALGEYYFGENKRMQTFILLALGTG 155 (321)
T ss_dssp HHHHHHHSTTTTCSSEEEEEESSS
T ss_pred HHHHHHhCCCCCCCcEEEEEECCc
Confidence 987322222223445666666643
No 143
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=20.14 E-value=3.2e+02 Score=27.44 Aligned_cols=53 Identities=9% Similarity=0.152 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEeCC-cCcHHHHHHHHhHhC
Q psy13563 227 EELNMDLFRATMKPVQKVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 279 (577)
Q Consensus 227 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGGs-srip~v~~~l~~~f~ 279 (577)
....+...+=....++++|+++++.+.+|+.|++...+ ...|.+-..|...+|
T Consensus 109 ~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (406)
T 2d3m_A 109 DICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLG 162 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 33445555666778889999999999999998775433 246667788888884
Done!