Query psy13565
Match_columns 182
No_of_seqs 143 out of 1592
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 22:29:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 6.9E-29 2.3E-33 212.9 15.2 165 1-165 123-319 (605)
2 4gni_A Putative heat shock pro 100.0 1.8E-28 6.3E-33 201.3 14.1 164 1-164 138-329 (409)
3 3d2f_A Heat shock protein homo 100.0 1.7E-28 5.8E-33 212.5 13.3 164 1-164 126-319 (675)
4 1yuw_A Heat shock cognate 71 k 100.0 7.2E-28 2.5E-32 204.8 14.9 164 1-164 127-315 (554)
5 2kho_A Heat shock protein 70; 100.0 3.3E-28 1.1E-32 208.7 11.4 164 1-164 123-318 (605)
6 3i33_A Heat shock-related 70 k 99.9 2.4E-27 8.3E-32 194.2 15.2 164 1-164 146-336 (404)
7 3qfu_A 78 kDa glucose-regulate 99.9 3.8E-27 1.3E-31 192.2 16.0 164 1-164 141-328 (394)
8 2v7y_A Chaperone protein DNAK; 99.9 5.5E-27 1.9E-31 197.6 14.4 163 1-164 97-287 (509)
9 1dkg_D Molecular chaperone DNA 99.9 5.5E-26 1.9E-30 184.9 13.7 163 2-164 124-318 (383)
10 1jce_A ROD shape-determining p 99.9 3.4E-22 1.2E-26 160.5 12.1 147 13-164 95-259 (344)
11 2fsj_A Hypothetical protein TA 99.7 1.6E-16 5.6E-21 127.8 8.8 102 14-116 120-243 (346)
12 4a2a_A Cell division protein F 99.6 1.2E-16 4.2E-21 131.5 5.7 140 16-164 161-307 (419)
13 3h1q_A Ethanolamine utilizatio 99.6 3.4E-15 1.2E-19 115.8 10.0 133 3-164 82-215 (272)
14 2ych_A Competence protein PILM 99.6 5E-15 1.7E-19 120.0 7.2 149 4-164 110-289 (377)
15 1k8k_A ARP3, actin-like protei 99.4 4.8E-13 1.6E-17 109.9 11.1 97 14-114 108-212 (418)
16 2fxu_A Alpha-actin-1, actin, a 99.4 2E-12 7E-17 104.8 10.7 98 8-113 93-196 (375)
17 2zgy_A Plasmid segregation pro 99.2 7.6E-12 2.6E-16 99.3 3.6 96 14-112 96-212 (320)
18 3js6_A Uncharacterized PARM pr 99.0 2.5E-10 8.7E-15 91.9 6.5 99 14-114 114-233 (355)
19 1k8k_B ARP2, actin-like protei 99.0 1E-10 3.6E-15 95.4 3.4 91 15-113 106-200 (394)
20 2d0o_A DIOL dehydratase-reacti 98.8 4.8E-09 1.6E-13 87.5 7.0 94 27-126 368-466 (610)
21 1nbw_A Glycerol dehydratase re 98.8 5.1E-09 1.7E-13 87.5 4.4 94 27-126 370-468 (607)
22 3dwl_A Actin-related protein 3 98.7 7.9E-08 2.7E-12 79.2 10.8 100 14-114 124-228 (427)
23 3qb0_A Actin-related protein 4 98.5 2.1E-07 7.3E-12 77.8 8.5 90 15-112 116-209 (498)
24 4am6_A Actin-like protein ARP8 98.5 7.1E-07 2.4E-11 76.2 11.6 93 14-113 222-318 (655)
25 4apw_A ALP12; actin-like prote 98.5 5E-08 1.7E-12 77.7 3.9 97 14-114 106-222 (329)
26 4fo0_A Actin-related protein 8 98.5 8.4E-07 2.9E-11 75.7 10.0 100 7-113 187-294 (593)
27 1t6c_A Exopolyphosphatase; alp 97.3 0.0012 4.3E-08 52.0 8.6 78 28-107 99-178 (315)
28 2p32_A Heat shock 70 kDa prote 97.3 0.00034 1.2E-08 47.3 4.6 62 110-171 39-100 (120)
29 3lof_A Heat shock 70 kDa prote 97.3 0.0004 1.4E-08 46.4 4.8 56 110-165 30-85 (113)
30 1ud0_A HSC70, 70 kDa heat-shoc 96.8 0.00088 3E-08 44.7 3.5 61 110-170 25-85 (113)
31 4ehu_A Activator of 2-hydroxyi 96.7 0.0015 5E-08 50.2 4.6 71 42-116 72-146 (276)
32 3mdq_A Exopolyphosphatase; str 96.7 0.006 2.1E-07 48.0 7.8 76 28-106 91-170 (315)
33 3hi0_A Putative exopolyphospha 96.6 0.013 4.5E-07 49.1 9.4 75 28-105 102-178 (508)
34 3cer_A Possible exopolyphospha 96.5 0.0072 2.4E-07 48.2 7.3 79 28-107 104-192 (343)
35 1u6z_A Exopolyphosphatase; alp 96.1 0.018 6E-07 48.4 7.7 77 28-107 98-177 (513)
36 4e81_A Chaperone protein DNAK; 91.1 0.22 7.5E-06 37.0 4.1 49 113-164 168-216 (219)
37 3cet_A Conserved archaeal prot 91.1 0.22 7.7E-06 39.3 4.2 33 49-84 113-145 (334)
38 3aap_A Ectonucleoside triphosp 89.4 0.57 2E-05 37.3 5.3 56 28-84 89-158 (353)
39 1u00_A HSC66, chaperone protei 85.9 1.6 5.5E-05 32.3 5.7 49 113-164 165-213 (227)
40 3d2f_A Heat shock protein homo 84.7 1.5 5.2E-05 37.9 5.7 52 113-164 574-626 (675)
41 3cj1_A Ectonucleoside triphosp 80.2 3.8 0.00013 33.7 6.2 20 65-84 189-208 (456)
42 4b9q_A Chaperone protein DNAK; 78.4 1.9 6.5E-05 36.7 4.1 48 114-164 557-604 (605)
43 2kho_A Heat shock protein 70; 77.0 2.1 7E-05 36.5 3.8 48 114-164 557-604 (605)
44 3zx3_A Ectonucleoside triphosp 65.7 14 0.00046 30.4 6.1 43 42-84 150-199 (452)
45 2i7n_A Pantothenate kinase 1; 59.9 12 0.00042 29.7 4.7 40 68-111 177-218 (360)
46 1hux_A Activator of (R)-2-hydr 59.7 19 0.00066 27.0 5.7 40 45-89 78-117 (270)
47 3bex_A Type III pantothenate k 58.4 45 0.0015 24.8 7.5 71 12-91 56-144 (249)
48 1msz_A DNA-binding protein smu 55.2 12 0.0004 23.3 3.1 29 15-43 33-61 (86)
49 3cer_A Possible exopolyphospha 51.4 66 0.0023 25.1 7.7 67 64-137 14-86 (343)
50 2kp6_A Uncharacterized protein 51.4 12 0.0004 23.1 2.6 22 16-37 40-61 (82)
51 3o8m_A Hexokinase; rnaseh-like 43.9 54 0.0018 27.1 6.3 58 26-86 185-244 (485)
52 2pfu_A Biopolymer transport EX 40.8 61 0.0021 19.8 5.5 40 12-51 56-95 (99)
53 3f9m_A Glucokinase; hexokinase 36.7 75 0.0026 26.2 6.0 57 26-85 184-243 (470)
54 3o8m_A Hexokinase; rnaseh-like 36.5 40 0.0014 27.9 4.4 25 64-88 78-102 (485)
55 1u6z_A Exopolyphosphatase; alp 36.1 75 0.0026 26.3 6.1 65 65-136 10-79 (513)
56 1t6c_A Exopolyphosphatase; alp 36.0 1E+02 0.0036 23.6 6.6 26 66-91 12-37 (315)
57 3vgl_A Glucokinase; ROK family 35.7 1.4E+02 0.0048 22.5 7.7 68 12-84 56-140 (321)
58 3hm8_A Hexokinase-3; glucose, 35.0 41 0.0014 27.5 4.2 25 64-88 57-81 (445)
59 3f9m_A Glucokinase; hexokinase 34.8 45 0.0015 27.5 4.4 26 64-89 75-100 (470)
60 1bdg_A Hexokinase; phosphotran 32.9 63 0.0021 26.3 5.0 57 25-84 171-229 (451)
61 3hm8_A Hexokinase-3; glucose, 31.5 1.2E+02 0.0039 24.9 6.3 57 26-85 160-219 (445)
62 2ews_A Pantothenate kinase; PA 30.7 31 0.0011 26.4 2.7 33 68-103 112-145 (287)
63 2yhx_A Hexokinase B; transfera 30.6 62 0.0021 26.5 4.6 26 64-89 59-84 (457)
64 1zxo_A Conserved hypothetical 30.2 32 0.0011 25.8 2.7 21 68-89 2-22 (291)
65 1bdg_A Hexokinase; phosphotran 29.9 52 0.0018 26.8 4.0 23 65-87 67-89 (451)
66 3mdq_A Exopolyphosphatase; str 28.9 1.9E+02 0.0066 22.0 9.3 27 65-91 3-29 (315)
67 3aap_A Ectonucleoside triphosp 28.3 57 0.002 25.6 3.9 22 66-87 3-24 (353)
68 3r8e_A Hypothetical sugar kina 26.4 2.1E+02 0.0071 21.6 6.9 78 10-91 74-167 (321)
69 3nkl_A UDP-D-quinovosamine 4-d 26.2 1E+02 0.0035 19.8 4.5 39 12-52 65-103 (141)
70 1zbs_A Hypothetical protein PG 26.1 51 0.0017 24.7 3.2 17 68-84 2-18 (291)
71 3cj1_A Ectonucleoside triphosp 25.6 73 0.0025 26.0 4.2 25 64-88 32-56 (456)
72 2ap1_A Putative regulator prot 24.8 1.5E+02 0.0051 22.4 5.7 67 13-84 81-164 (327)
73 3djc_A Type III pantothenate k 23.5 65 0.0022 24.2 3.3 18 67-84 3-20 (266)
74 1kae_A HDH, histidinol dehydro 23.3 1.7E+02 0.0059 23.8 5.8 68 13-84 154-243 (434)
75 2l09_A ASR4154 protein; proto- 22.9 38 0.0013 19.6 1.4 25 20-44 16-40 (62)
76 4a57_A Nucleoside-triphosphata 22.9 41 0.0014 28.5 2.1 19 65-83 246-264 (611)
77 4ehu_A Activator of 2-hydroxyi 22.4 71 0.0024 23.5 3.3 18 67-84 2-19 (276)
78 1zc6_A Probable N-acetylglucos 22.3 70 0.0024 24.1 3.3 22 66-87 11-32 (305)
79 2ch5_A NAGK protein; transfera 20.9 2.7E+02 0.0093 20.9 7.8 62 12-79 70-134 (347)
80 4gic_A HDH, histidinol dehydro 20.5 61 0.0021 26.3 2.7 71 13-84 160-249 (423)
81 3zx3_A Ectonucleoside triphosp 20.4 98 0.0034 25.3 3.9 24 64-87 32-55 (452)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.96 E-value=6.9e-29 Score=212.92 Aligned_cols=165 Identities=46% Similarity=0.715 Sum_probs=142.2
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV 80 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dv 80 (182)
|++.+++++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++.....+.+++|||+||||||+
T Consensus 123 lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dv 202 (605)
T 4b9q_A 123 MKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDI 202 (605)
T ss_dssp HHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEE
T ss_pred HHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEE
Confidence 46788999999999999999999999999999999999999999999999999999988876667899999999999999
Q ss_pred EEEEEeC----Cceee----ccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc-
Q psy13565 81 SLLTIDN----DHRRR----KDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA- 141 (182)
Q Consensus 81 sv~~~~~----~~~~~----~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~- 141 (182)
+++++.+ +.+.+ ++..+||++||+.|.+++..++.. ....+|+..++++|..|+.+.....
T Consensus 203 si~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~ 282 (605)
T 4b9q_A 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVN 282 (605)
T ss_dssp EEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEE
T ss_pred EEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEE
Confidence 9999877 55553 467899999999999999876532 2334688899999999987654422
Q ss_pred -------------hhhhhcHHHHHHHHHHHHHHHhcc
Q psy13565 142 -------------PEFQKKKKELEDVVQPIIAKLYQG 165 (182)
Q Consensus 142 -------------~~~~itr~el~~~i~p~l~~~~~~ 165 (182)
..+.++|++|++++.|++++++..
T Consensus 283 ~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~ 319 (605)
T 4b9q_A 283 LPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEP 319 (605)
T ss_dssp EEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHH
T ss_pred EeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999988753
No 2
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.96 E-value=1.8e-28 Score=201.29 Aligned_cols=164 Identities=24% Similarity=0.340 Sum_probs=138.3
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhccc--ccCceeEEEEecCCceE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDK--KEGEKNVLVFDLGGGTF 78 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~--~~~~~~vlv~D~G~gt~ 78 (182)
|++.++..++.++.++|+|||++|++.+|+++++|++.||++++.+++||+|||++|+... .+.+.+++|||+|||||
T Consensus 138 l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~ 217 (409)
T 4gni_A 138 LVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRS 217 (409)
T ss_dssp HHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCE
T ss_pred HHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCce
Confidence 3567888999999999999999999999999999999999999999999999999998765 25788999999999999
Q ss_pred EEEEEEEeCCceee----ccCCCCcchhhhcccchhhhhhchh------------hhhhHHHHHHHHHhcccccccCCc-
Q psy13565 79 DVSLLTIDNDHRRR----KDHHGGGDRRQDQVAPFLFLQITDA------------EKTTMEEAIDDKIKWLDENQDADA- 141 (182)
Q Consensus 79 dvsv~~~~~~~~~~----~~~~~GG~~id~~l~~~l~~~l~~~------------~~~~l~~~~~~~k~~L~~~~~~~~- 141 (182)
|++++++.++.+.+ ++..+||++||+.|.+++..++... ...+|+..++++|+.|+.+.....
T Consensus 218 dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~ 297 (409)
T 4gni_A 218 DVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFS 297 (409)
T ss_dssp EEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred EEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 99999998886663 3578999999999999998766432 234577888999998887654332
Q ss_pred ---------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 ---------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 ---------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
....++|++|+++++|+++++..
T Consensus 298 i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~ 329 (409)
T 4gni_A 298 VESLIDGLDFASTINRLRYETIARTVFEGFNR 329 (409)
T ss_dssp EEEEETTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred eecccCCcceEEEeeHHHHHHHHHHHHHHHHH
Confidence 25679999999999999988874
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.96 E-value=1.7e-28 Score=212.46 Aligned_cols=164 Identities=26% Similarity=0.416 Sum_probs=138.0
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc------cCceeEEEEecC
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK------EGEKNVLVFDLG 74 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~------~~~~~vlv~D~G 74 (182)
|++.++.++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++... ..+.+++|||+|
T Consensus 126 lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlG 205 (675)
T 3d2f_A 126 VKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIG 205 (675)
T ss_dssp HHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEEC
T ss_pred HHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcC
Confidence 35678889999999999999999999999999999999999999999999999999987552 357889999999
Q ss_pred CceEEEEEEEEeCCceee----ccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCC
Q psy13565 75 GGTFDVSLLTIDNDHRRR----KDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDAD 140 (182)
Q Consensus 75 ~gt~dvsv~~~~~~~~~~----~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~ 140 (182)
|||||++++++.++.+.+ ++..+||++||+.|++++..++.. ....+|+..++++|..|+.+..+.
T Consensus 206 GGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~ 285 (675)
T 3d2f_A 206 HSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAP 285 (675)
T ss_dssp SSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred CCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceE
Confidence 999999999998887752 467899999999999999765422 223457888999999887654332
Q ss_pred c----------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 141 A----------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 141 ~----------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
+ ..+.++|++|+++|.|+++++..
T Consensus 286 i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~ 319 (675)
T 3d2f_A 286 FSVESVMNDVDVSSQLSREELEELVKPLLERVTE 319 (675)
T ss_dssp EEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTH
T ss_pred EEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHH
Confidence 1 24678999999999999877764
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.95 E-value=7.2e-28 Score=204.75 Aligned_cols=164 Identities=49% Similarity=0.704 Sum_probs=138.2
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-cCceeEEEEecCCceEE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-EGEKNVLVFDLGGGTFD 79 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~~~~~vlv~D~G~gt~d 79 (182)
|++.+++++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++... ..+.+++|||+||||||
T Consensus 127 lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~D 206 (554)
T 1yuw_A 127 MKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFD 206 (554)
T ss_dssp HHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEE
T ss_pred HHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEE
Confidence 35678889999999999999999999999999999999999999999999999999988764 35789999999999999
Q ss_pred EEEEEEeCCcee----eccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc----
Q psy13565 80 VSLLTIDNDHRR----RKDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA---- 141 (182)
Q Consensus 80 vsv~~~~~~~~~----~~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~---- 141 (182)
++++++.++.+. .++..+||++||+.|.+++..++.. ....+|++.++++|+.|+.+..+.+
T Consensus 207 vsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~ 286 (554)
T 1yuw_A 207 VSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDS 286 (554)
T ss_dssp EEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred EEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEee
Confidence 999999887774 3467899999999999999865422 2234578889999998886543322
Q ss_pred ------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 ------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 ------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
....++|++|+++++|+++++.+
T Consensus 287 ~~~g~~~~~~ltr~~~e~l~~~~~~~i~~ 315 (554)
T 1yuw_A 287 LYEGIDFYTSITRARFEELNADLFRGTLD 315 (554)
T ss_dssp CSSSCCEEEEEEHHHHHHHTHHHHHHTTH
T ss_pred ccCCceEEEEEEHHHHHHHHHHHHHHHHH
Confidence 24578999999999999887664
No 5
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.95 E-value=3.3e-28 Score=208.66 Aligned_cols=164 Identities=47% Similarity=0.731 Sum_probs=138.0
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV 80 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dv 80 (182)
|++.+++++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++.....+.+++|||+||||||+
T Consensus 123 l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dv 202 (605)
T 2kho_A 123 MKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDI 202 (605)
T ss_dssp HHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEE
T ss_pred HHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEE
Confidence 35678889999999999999999999999999999999999999999999999999988764467899999999999999
Q ss_pred EEEEEe----CCcee----eccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc-
Q psy13565 81 SLLTID----NDHRR----RKDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA- 141 (182)
Q Consensus 81 sv~~~~----~~~~~----~~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~- 141 (182)
+++++. ++.+. .++..+||++||+.|++++..++.. ....+|++.++++|..|+.+..+.+
T Consensus 203 si~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~ 282 (605)
T 2kho_A 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVN 282 (605)
T ss_dssp EEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred EEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEE
Confidence 999987 56665 3567899999999999999876532 2234578889999998886543322
Q ss_pred -------------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 -------------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 -------------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
..+.++|++|+++++|++++++.
T Consensus 283 l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~ 318 (605)
T 2kho_A 283 LPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIE 318 (605)
T ss_dssp EEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTS
T ss_pred ecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHH
Confidence 13489999999999998877764
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.95 E-value=2.4e-27 Score=194.20 Aligned_cols=164 Identities=49% Similarity=0.707 Sum_probs=139.3
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-c--CceeEEEEecCCce
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-E--GEKNVLVFDLGGGT 77 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~--~~~~vlv~D~G~gt 77 (182)
|++.++..++.++.++|||||++|++.+|+.+++|++.||++++.+++||+|||++|+.... . .+.+++|||+||||
T Consensus 146 l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT 225 (404)
T 3i33_A 146 MKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGT 225 (404)
T ss_dssp HHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSC
T ss_pred HHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCc
Confidence 46678889999999999999999999999999999999999999999999999999987765 2 67889999999999
Q ss_pred EEEEEEEEeCCcee----eccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc--
Q psy13565 78 FDVSLLTIDNDHRR----RKDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA-- 141 (182)
Q Consensus 78 ~dvsv~~~~~~~~~----~~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~-- 141 (182)
||++++++.++.+. .++..+||++||+.|.+++..++.. ....+|++.++++|+.|+.+.....
T Consensus 226 ~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~ 305 (404)
T 3i33_A 226 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEI 305 (404)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEE
T ss_pred EEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEE
Confidence 99999998887765 3457899999999999999766532 3345678889999998887654432
Q ss_pred --------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 --------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 --------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
....++|++|++++.|+++++++
T Consensus 306 ~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~ 336 (404)
T 3i33_A 306 DSLYEGVDFYTSITRARFEELNADLFRGTLE 336 (404)
T ss_dssp EEEETTEEEEEEEEHHHHHHHTHHHHHHTHH
T ss_pred eeccCCceeEEEEcHHHHHHHHHHHHHHHHH
Confidence 34678999999999999887764
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.95 E-value=3.8e-27 Score=192.20 Aligned_cols=164 Identities=47% Similarity=0.697 Sum_probs=140.4
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV 80 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dv 80 (182)
|++.++++++.++.++|+|||++|++.+|+.+++|++.||++++.+++||+|+|++|++...+...+++|+|+||||||+
T Consensus 141 l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dv 220 (394)
T 3qfu_A 141 MKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDV 220 (394)
T ss_dssp HHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEE
T ss_pred HHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeE
Confidence 46778899999999999999999999999999999999999999999999999999988776678899999999999999
Q ss_pred EEEEEeCCcee----eccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc-----
Q psy13565 81 SLLTIDNDHRR----RKDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA----- 141 (182)
Q Consensus 81 sv~~~~~~~~~----~~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~----- 141 (182)
+++++.++.+. .++..+||++||+.|.+++..++.. ....++++.++.+|+.|+.......
T Consensus 221 sv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~ 300 (394)
T 3qfu_A 221 SLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSF 300 (394)
T ss_dssp EEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEE
T ss_pred EEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEec
Confidence 99998888775 3457899999999999999766532 2334577888999988887654332
Q ss_pred -----hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 -----PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 -----~~~~itr~el~~~i~p~l~~~~~ 164 (182)
....++|++|++++.|+++++.+
T Consensus 301 ~~~~~~~~~i~r~~~~~~~~~~~~~i~~ 328 (394)
T 3qfu_A 301 VDGIDLSETLTRAKFEELNLDLFKKTLK 328 (394)
T ss_dssp ETTEEEEEEEEHHHHHHHHHHHHHHTHH
T ss_pred cCCceeEEEEEHHHHHHHHHHHHHHHHH
Confidence 34678999999999999888764
No 8
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.95 E-value=5.5e-27 Score=197.62 Aligned_cols=163 Identities=45% Similarity=0.691 Sum_probs=137.3
Q ss_pred CHHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEE
Q psy13565 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV 80 (182)
Q Consensus 1 l~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dv 80 (182)
|+..+++++|.++.++|+|||++|++.||+++++|++.||++++.+++||+|||++|+.... .+.+++|||+||||||+
T Consensus 97 l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dv 175 (509)
T 2v7y_A 97 LKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDV 175 (509)
T ss_dssp HHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEE
T ss_pred HHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEE
Confidence 35677888999999999999999999999999999999999999999999999999988764 67899999999999999
Q ss_pred EEEEEeCCceee----ccCCCCcchhhhcccchhhhhhchh----------hhhhHHHHHHHHHhcccccccCCc-----
Q psy13565 81 SLLTIDNDHRRR----KDHHGGGDRRQDQVAPFLFLQITDA----------EKTTMEEAIDDKIKWLDENQDADA----- 141 (182)
Q Consensus 81 sv~~~~~~~~~~----~~~~~GG~~id~~l~~~l~~~l~~~----------~~~~l~~~~~~~k~~L~~~~~~~~----- 141 (182)
+++++.++.+.+ ++..+||++||+.|.+++.+++... ...++++.++++|+.|+.......
T Consensus 176 sv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~ 255 (509)
T 2v7y_A 176 SILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFI 255 (509)
T ss_dssp EEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEE
T ss_pred EEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEecc
Confidence 999988776653 4678999999999999998765322 224578889999998886543322
Q ss_pred ---------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 ---------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 ---------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
..+.++|++|+++++|+++++..
T Consensus 256 ~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~ 287 (509)
T 2v7y_A 256 SANENGPLHLEMTLTRAKFEELSAHLVERTMG 287 (509)
T ss_dssp EEETTEEEEEEEEEEHHHHHHHTHHHHHTTHH
T ss_pred ccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 23489999999999999887664
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.93 E-value=5.5e-26 Score=184.93 Aligned_cols=163 Identities=47% Similarity=0.727 Sum_probs=133.3
Q ss_pred HHHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEE
Q psy13565 2 KETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVS 81 (182)
Q Consensus 2 ~~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvs 81 (182)
++.+++.++.++..+|+|+|++|++.+|+.+++|++.||++++.+++||+|+|++|+......+.+++|+|+||||||++
T Consensus 124 ~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvs 203 (383)
T 1dkg_D 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDIS 203 (383)
T ss_dssp HHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEE
T ss_pred HHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEE
Confidence 45677889999999999999999999999999999999999999999999999999876544678999999999999999
Q ss_pred EEEEe----CCcee----eccCCCCcchhhhcccchhhhhhch----------hhhhhHHHHHHHHHhcccccccCCc--
Q psy13565 82 LLTID----NDHRR----RKDHHGGGDRRQDQVAPFLFLQITD----------AEKTTMEEAIDDKIKWLDENQDADA-- 141 (182)
Q Consensus 82 v~~~~----~~~~~----~~~~~~GG~~id~~l~~~l~~~l~~----------~~~~~l~~~~~~~k~~L~~~~~~~~-- 141 (182)
+++.. ++.+. .++..+||++||+.|.+++.+++.. ....++++.++++|+.|+.......
T Consensus 204 v~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i 283 (383)
T 1dkg_D 204 IIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283 (383)
T ss_dssp EEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 99987 34443 2457899999999999999876532 2234577888888888876443221
Q ss_pred ------------hhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 142 ------------PEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 142 ------------~~~~itr~el~~~i~p~l~~~~~ 164 (182)
..+.++|++|+++++|.++++.+
T Consensus 284 ~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~ 318 (383)
T 1dkg_D 284 PYITADATGPKHMNIKVTRAKLESLVEDLVNRSIE 318 (383)
T ss_dssp EEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHH
T ss_pred ecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHH
Confidence 12488999999999999888764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.88 E-value=3.4e-22 Score=160.50 Aligned_cols=147 Identities=22% Similarity=0.334 Sum_probs=115.6
Q ss_pred cCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCceee
Q psy13565 13 VTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRR 92 (182)
Q Consensus 13 ~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~~ 92 (182)
...+|+|+|++|++.+|+.+++|++.+|++.+.+++||+|+|++|+.... .+.+++|+|+|+||||+++++..+ ....
T Consensus 95 ~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~-~~~~ 172 (344)
T 1jce_A 95 KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGS-IVTW 172 (344)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCC-EEee
Confidence 47899999999999999999999999999999999999999999977654 567899999999999999997533 3345
Q ss_pred ccCCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhcccccccC------C------------chhhhhcHHHHHHH
Q psy13565 93 KDHHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQDA------D------------APEFQKKKKELEDV 154 (182)
Q Consensus 93 ~~~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~------~------------~~~~~itr~el~~~ 154 (182)
.+..+||++||+.|.+++.+++.... -.+.++..|+.++..... . ...+.++|++|+++
T Consensus 173 ~~~~lGG~~id~~l~~~l~~~~~~~~---~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~ 249 (344)
T 1jce_A 173 ESIRIAGDEMDEAIVQYVRETYRVAI---GERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREA 249 (344)
T ss_dssp EEESCSHHHHHHHHHHHHHHHHCEEC---CHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHH
T ss_pred CCCCccChhHHHHHHHHHHHHhCccc---CHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHH
Confidence 67789999999999999987653211 123455555555533211 0 12467899999999
Q ss_pred HHHHHHHHhc
Q psy13565 155 VQPIIAKLYQ 164 (182)
Q Consensus 155 i~p~l~~~~~ 164 (182)
++|.++++.+
T Consensus 250 ~~~~~~~i~~ 259 (344)
T 1jce_A 250 LRSVVVAIVE 259 (344)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877764
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.66 E-value=1.6e-16 Score=127.75 Aligned_cols=102 Identities=18% Similarity=0.106 Sum_probs=82.4
Q ss_pred CeEE--EecCCCCCHHHHHHHHHHHHHc--------C------CcEEEeecchhHHHHHhhccc---ccCceeEEEEecC
Q psy13565 14 THAV--VTVPAYFNDAQRQATKDAGVIA--------G------LTVMRIINEPTAAAIAYGLDK---KEGEKNVLVFDLG 74 (182)
Q Consensus 14 ~~~v--itvP~~~~~~~r~~l~~a~~~a--------g------~~~~~~i~ep~Aaa~~~~~~~---~~~~~~vlv~D~G 74 (182)
..+| +++|++|...+|+++++++..+ | +..+.+++||+||+++| +.. .+...+++|+|+|
T Consensus 120 ~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIG 198 (346)
T 2fsj_A 120 VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVG 198 (346)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEEC
T ss_pred eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHh-hccccccccCCcEEEEECC
Confidence 5699 9999999999999999998765 4 45688999999999987 322 1234678999999
Q ss_pred CceEEEEEEEEeCCcee---eccCCCCcchhhhcccchhhhhhch
Q psy13565 75 GGTFDVSLLTIDNDHRR---RKDHHGGGDRRQDQVAPFLFLQITD 116 (182)
Q Consensus 75 ~gt~dvsv~~~~~~~~~---~~~~~~GG~~id~~l~~~l~~~l~~ 116 (182)
|||||++++++.++... ..+..+||+++++.|.+++..++..
T Consensus 199 gGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~ 243 (346)
T 2fsj_A 199 SRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGF 243 (346)
T ss_dssp SSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHHCC
T ss_pred CCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHhCC
Confidence 99999999987665432 2566899999999999988877643
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.64 E-value=1.2e-16 Score=131.47 Aligned_cols=140 Identities=11% Similarity=0.033 Sum_probs=101.4
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee-ecc
Q psy13565 16 AVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKD 94 (182)
Q Consensus 16 ~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~ 94 (182)
.+++.| ....+++.+|++.||+++..++.||.|+++++.... .+..+++++|+||||||+++++ ++... ..+
T Consensus 161 ~~v~~~----~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-~~~~gv~vvDiGggttdisi~~--~g~~~~~~~ 233 (419)
T 4a2a_A 161 TSIVVP----LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-EKDRGVVVVNLGYNFTGLIAYK--NGVPIKISY 233 (419)
T ss_dssp EEEEEE----HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-HHHHCEEEEEECSSSEEEEEEE--TTEEEEEEE
T ss_pred EEEEEe----HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-cccCCEEEEEECCCcEEEEEEE--CCEEEEEEe
Confidence 344554 367889999999999999999999999999885433 3667899999999999999997 45444 567
Q ss_pred CCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhcccccccC------CchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 95 HHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQDA------DAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 95 ~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~------~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
.++||++||+.|+..+...+..+++.|....+ +....+..... ......+++++|.++++|+++++++
T Consensus 234 i~~GG~~it~dIa~~l~~~~~~AE~iK~~~g~--a~~~~~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~veei~~ 307 (419)
T 4a2a_A 234 VPVGMKHVIKDVSAVLDTSFEESERLIITHGN--AVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLREIMS 307 (419)
T ss_dssp ESCCHHHHHHHHHHHHTCCHHHHHHHHHHHCC--SCCTTCCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHCCCHHHHHHHHHHhcc--CcccCCCCceEEEeecCCccceEEcHHHHHHHHHHHHHHHHH
Confidence 89999999999998776555555544433321 10000111000 1134578999999999999999874
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.60 E-value=3.4e-15 Score=115.85 Aligned_cols=133 Identities=26% Similarity=0.386 Sum_probs=100.0
Q ss_pred HHHHhHhCCccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEE
Q psy13565 3 ETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSL 82 (182)
Q Consensus 3 ~~~~~~~g~~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv 82 (182)
..+....+.+...+++++|++|...+|++++++++.+|++...++.||.|++++++.. ..+|+|+|||+|++++
T Consensus 82 ~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~viDiGggst~~~~ 155 (272)
T 3h1q_A 82 AKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGIVVDIGGGTTGIAV 155 (272)
T ss_dssp HHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEEEEEECSSCEEEEE
T ss_pred HHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEEEEEECCCcEEEEE
Confidence 3445566888899999999999999999999999999999999999999999998653 3599999999999999
Q ss_pred EEEeCCce-eeccCCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHH
Q psy13565 83 LTIDNDHR-RRKDHHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAK 161 (182)
Q Consensus 83 ~~~~~~~~-~~~~~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~ 161 (182)
+. ++.. .....++||.+||+.+..++...+ +.++..|+.++ +++++++++.+++++
T Consensus 156 ~~--~g~~~~~~~~~~Gg~~~~~~l~~~l~~~~---------~~ae~~k~~~~------------~~~~~~~~~~~~~~~ 212 (272)
T 3h1q_A 156 IE--KGKITATFDEPTGGTHLSLVLAGSYKIPF---------EEAETIKKDFS------------RHREIMRVVRPVIEK 212 (272)
T ss_dssp EE--TTEEEEECCBSCCHHHHHHHHHHHHTCCH---------HHHHHHHHSST------------THHHHHHHHHHHHHH
T ss_pred EE--CCEEEEEecCCCcHHHHHHHHHHHhCCCH---------HHHHHHHHhcC------------CHHHHHHHHHHHHHH
Confidence 97 4433 345678999999999988775222 12233333332 467777777777766
Q ss_pred Hhc
Q psy13565 162 LYQ 164 (182)
Q Consensus 162 ~~~ 164 (182)
+..
T Consensus 213 i~~ 215 (272)
T 3h1q_A 213 MAL 215 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.55 E-value=5e-15 Score=119.98 Aligned_cols=149 Identities=18% Similarity=0.203 Sum_probs=96.6
Q ss_pred HHHhHhCCccCeEEEecCCCCCH-------------------HHHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-c
Q psy13565 4 TAEAYLGKKVTHAVVTVPAYFND-------------------AQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-E 63 (182)
Q Consensus 4 ~~~~~~g~~~~~~vitvP~~~~~-------------------~~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~ 63 (182)
.++++++.++.+.++.+|. .+. ...+.+.+|++.||+++..++.||.|++.+|+.... .
T Consensus 110 ea~~~~~~~~~~~vid~~~-~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~ 188 (377)
T 2ych_A 110 EAERYIPFPIDEVVLDFAP-LTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEE 188 (377)
T ss_dssp HHGGGCSSCC-CEEEEEEE-SSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTS
T ss_pred HHhhcCCCChhHceEEEEE-eCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccc
Confidence 3556777888888888873 211 224889999999999999999999999998864332 3
Q ss_pred CceeEEEEecCCceEEEEEEEEeCCce-eeccCCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhccccccc----
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDNDHR-RRKDHHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQD---- 138 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~~~-~~~~~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~~~---- 138 (182)
...+++++|+|+||||+++++ .+.. ...+..+||++||+.|...+...+.. ++..|..++....
T Consensus 189 ~~~~~~vvDiGggttdi~i~~--~g~~~~~~~~~~GG~~i~~~i~~~~~~~~~~---------aE~~K~~~~~~~~~~~~ 257 (377)
T 2ych_A 189 PDRVFLVLDIGAESTSLVLLR--GDKPLAVRVLTLSGKDFTEAIARSFNLDLLA---------AEEVKRTYGMATLPTED 257 (377)
T ss_dssp TTCEEEEEEECSSCEEEEEEE--TTEEEEEEEESCSHHHHHHHHHHHTTCCHHH---------HHHHHHHTC--------
T ss_pred cCCeEEEEEECCCcEEEEEEE--CCEEEEEEeeechHHHHHHHHHHHhCCCHHH---------HHHHHhhcccccccccc
Confidence 567899999999999999997 3333 35677899999999998754322222 2222222221100
Q ss_pred ------CCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 139 ------ADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 139 ------~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
.......+++++|+++++|+++++..
T Consensus 258 ~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~ 289 (377)
T 2ych_A 258 EELLLDFDAERERYSPGRIYDAIRPVLVELTQ 289 (377)
T ss_dssp -----------------CHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 00123467888898888888777653
No 15
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.45 E-value=4.8e-13 Score=109.86 Aligned_cols=97 Identities=15% Similarity=0.057 Sum_probs=79.9
Q ss_pred CeEEEecCCCCCHHHHHHHHHHH-HHcCCcEEEeecchhHHHHH-hh---cccccCceeEEEEecCCceEEEEEEEEeCC
Q psy13565 14 THAVVTVPAYFNDAQRQATKDAG-VIAGLTVMRIINEPTAAAIA-YG---LDKKEGEKNVLVFDLGGGTFDVSLLTIDND 88 (182)
Q Consensus 14 ~~~vitvP~~~~~~~r~~l~~a~-~~ag~~~~~~i~ep~Aaa~~-~~---~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~ 88 (182)
..+|+|+|++|+..+|+.+.+++ +.+|++.+.+++||+|++++ |. .... .. +.+|+|+|+|+|+++++. ++
T Consensus 108 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~-~~-~glVvDiG~gtt~v~~v~--~G 183 (418)
T 1k8k_A 108 HYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER-TL-TGTVIDSGDGVTHVIPVA--EG 183 (418)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC-CC-CEEEEEESSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC-CC-eEEEEEcCCCceEEEEeE--CC
Confidence 47999999999999999999998 88999999999999999887 42 1111 22 679999999999999996 34
Q ss_pred cee---eccCCCCcchhhhcccchhhhhh
Q psy13565 89 HRR---RKDHHGGGDRRQDQVAPFLFLQI 114 (182)
Q Consensus 89 ~~~---~~~~~~GG~~id~~l~~~l~~~l 114 (182)
... .....+||+++|+.|.++|..+.
T Consensus 184 ~~~~~~~~~~~lGG~~lt~~l~~~l~~~~ 212 (418)
T 1k8k_A 184 YVIGSCIKHIPIAGRDITYFIQQLLRDRE 212 (418)
T ss_dssp EECGGGCEEESCSHHHHHHHHHHHHHTTC
T ss_pred EEcccceEEEeCcHHHHHHHHHHHHHhcC
Confidence 332 25678999999999999887653
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.39 E-value=2e-12 Score=104.80 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=80.9
Q ss_pred HhCCcc--CeEEEecCCCCCHHHHHHHHHH-HHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEE
Q psy13565 8 YLGKKV--THAVVTVPAYFNDAQRQATKDA-GVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 8 ~~g~~~--~~~vitvP~~~~~~~r~~l~~a-~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~ 84 (182)
.++..+ ..+++|+|++++..+|+.+.++ .+.+|++.+.+++||+|++++++. .+.+|+|+|+|+|+++.+.
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~ 166 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY 166 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE
Confidence 344443 4599999999999999987766 588899999999999999999975 4689999999999999885
Q ss_pred EeCCcee---eccCCCCcchhhhcccchhhhh
Q psy13565 85 IDNDHRR---RKDHHGGGDRRQDQVAPFLFLQ 113 (182)
Q Consensus 85 ~~~~~~~---~~~~~~GG~~id~~l~~~l~~~ 113 (182)
++... .....+||+++|+.|..++..+
T Consensus 167 --~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~ 196 (375)
T 2fxu_A 167 --EGYALPHAIMRLDLAGRDLTDYLMKILTER 196 (375)
T ss_dssp --TTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred --CCEEeccceEEeccCHHHHHHHHHHHHHhc
Confidence 44333 2356899999999999998764
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.19 E-value=7.6e-12 Score=99.34 Aligned_cols=96 Identities=22% Similarity=0.266 Sum_probs=70.1
Q ss_pred CeEEEecCCC-CCHH--HH--HHHHHH------------HHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCc
Q psy13565 14 THAVVTVPAY-FNDA--QR--QATKDA------------GVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGG 76 (182)
Q Consensus 14 ~~~vitvP~~-~~~~--~r--~~l~~a------------~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~g 76 (182)
..+|+++|.. |... ++ ..+.+- .+.+++..+.+++||.|+++.+.... ..+.+++++|||+|
T Consensus 96 ~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~-~~~~~~~vvDiGgg 174 (320)
T 2zgy_A 96 VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQEL-DELDSLLIIDLGGT 174 (320)
T ss_dssp EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHS-CTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccc-cCCCCEEEEEcCCC
Confidence 3699999987 5431 11 222221 23345678899999999999886332 35678999999999
Q ss_pred eEEEEEEEEeCCcee----eccCCCCcchhhhcccchhhh
Q psy13565 77 TFDVSLLTIDNDHRR----RKDHHGGGDRRQDQVAPFLFL 112 (182)
Q Consensus 77 t~dvsv~~~~~~~~~----~~~~~~GG~~id~~l~~~l~~ 112 (182)
|||+++++ ++... .++..+||+++|+.|.+++.+
T Consensus 175 ttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~ 212 (320)
T 2zgy_A 175 TLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL 212 (320)
T ss_dssp CEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC
T ss_pred eEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH
Confidence 99999998 44432 356789999999999998864
No 18
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.04 E-value=2.5e-10 Score=91.94 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=77.4
Q ss_pred CeEEEecCCCCCHHHH-HHHHHHHHHcCC------------cEEEeecchhHHHHHhhccccc-----CceeEEEEecCC
Q psy13565 14 THAVVTVPAYFNDAQR-QATKDAGVIAGL------------TVMRIINEPTAAAIAYGLDKKE-----GEKNVLVFDLGG 75 (182)
Q Consensus 14 ~~~vitvP~~~~~~~r-~~l~~a~~~ag~------------~~~~~i~ep~Aaa~~~~~~~~~-----~~~~vlv~D~G~ 75 (182)
..+++++|..+...+| +.+++.+...+- ..+.+++||.||++.+..+... .+..++++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 4799999999887776 589988875543 5788999999999998764421 467899999999
Q ss_pred ceEEEEEEEEeCCcee---eccCCCCcchhhhcccchhhhhh
Q psy13565 76 GTFDVSLLTIDNDHRR---RKDHHGGGDRRQDQVAPFLFLQI 114 (182)
Q Consensus 76 gt~dvsv~~~~~~~~~---~~~~~~GG~~id~~l~~~l~~~l 114 (182)
||||++++. ++... ......||..+++.|.+++..+.
T Consensus 194 gTtd~~v~~--~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~ 233 (355)
T 3js6_A 194 GTTIIDTYQ--NMKRVEEESFVINKGTIDFYKRIASHVSKKS 233 (355)
T ss_dssp SCEEEEEEE--TTEECGGGCEEESCCHHHHHHHHHHHTC---
T ss_pred CcEEEEEEc--CCEEccccccCcchHHHHHHHHHHHHHHHhc
Confidence 999999994 55553 33567899999999999998764
No 19
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.02 E-value=1e-10 Score=95.38 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=35.7
Q ss_pred eEEEecCCCCCHHHHHHHHHH-HHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee--
Q psy13565 15 HAVVTVPAYFNDAQRQATKDA-GVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-- 91 (182)
Q Consensus 15 ~~vitvP~~~~~~~r~~l~~a-~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-- 91 (182)
.+++++|+.++..+|+.+.+. .+..|++.+.++++|+|++++++. .+.+|+|+|+|+|+++.+. ++...
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~--~G~~~~~ 177 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVY--EGFSLPH 177 (394)
T ss_dssp ------------------------------------------------------CCEEEECSSCEEEECEE--TTEECST
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeE--CCEEccc
Confidence 499999999999999988875 578899999999999999998865 4679999999999999885 44443
Q ss_pred -eccCCCCcchhhhcccchhhhh
Q psy13565 92 -RKDHHGGGDRRQDQVAPFLFLQ 113 (182)
Q Consensus 92 -~~~~~~GG~~id~~l~~~l~~~ 113 (182)
.....+||+++|+.|..+|..+
T Consensus 178 ~~~~~~~GG~~lt~~l~~~l~~~ 200 (394)
T 1k8k_B 178 LTRRLDIAGRDITRYLIKLLLLR 200 (394)
T ss_dssp TCEEESCCHHHHHHHHHHHHHHT
T ss_pred ceEEeeccHHHHHHHHHHHHHhc
Confidence 2356899999999999988764
No 20
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.84 E-value=4.8e-09 Score=87.48 Aligned_cols=94 Identities=20% Similarity=0.173 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHc-CC--cEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchh
Q psy13565 27 AQRQATKDAGVIA-GL--TVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRR 102 (182)
Q Consensus 27 ~~r~~l~~a~~~a-g~--~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~i 102 (182)
.+.+++.+|++++ |+ ++.. .||.|+++++ +..++++..++++||||||||+++|. ++... ....++||+++
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaa-LTeDE~eLGvaiIDmGGGTTd~sVf~--~G~lv~a~~ip~gG~~V 442 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGA-LTTPGTTRPLAILDLGAGSTDASIIN--PKGDIIATHLAGAGDMV 442 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHH-TTSTTCCSSEEEEEECSSEEEEEEEC--TTCCEEEEEEECSHHHH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhh-cCCCCCcCCeEEEEeCCCcceEEEEc--CCcEEEEEEeccchHHH
Confidence 4678999999999 99 7777 9999999998 55556999999999999999999996 44444 45678999999
Q ss_pred hhcccchhhhh-hchhhhhhHHHHH
Q psy13565 103 QDQVAPFLFLQ-ITDAEKTTMEEAI 126 (182)
Q Consensus 103 d~~l~~~l~~~-l~~~~~~~l~~~~ 126 (182)
+..|..-|... +..+++.|. +.+
T Consensus 443 T~DIA~~Lgt~d~~~AErIK~-YG~ 466 (610)
T 2d0o_A 443 TMIIARELGLEDRYLAEEIKK-YPL 466 (610)
T ss_dssp HHHHHHHHTCCCHHHHHHHHH-SCE
T ss_pred HHHHHHHhCCCCHHHHHHhcc-cCc
Confidence 99999998877 777777766 444
No 21
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.75 E-value=5.1e-09 Score=87.52 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHc-CC--cEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchh
Q psy13565 27 AQRQATKDAGVIA-GL--TVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRR 102 (182)
Q Consensus 27 ~~r~~l~~a~~~a-g~--~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~i 102 (182)
.+.+++.+|++++ |+ ++.. .||.|+++++ +..++++..++++||||||||+++|. ++... ....++||+++
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laa-LTedE~elGvaiIDmGgGTTd~sVf~--~g~lv~a~~ip~gG~~V 444 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGA-LTTPGCAAPLAILDLGAGSTDAAIVN--AEGQITAVHLAGAGNMV 444 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHH-TTSTTCCSSEEEEEECSSEEEEEEEC--SSSCEEEEEEECCHHHH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhh-cCCCCCcCCeEEEEeCCCcceEEEEc--CCcEEEEEEeccchHHH
Confidence 3557899999999 99 6666 9999999998 55556999999999999999999996 44444 45678999999
Q ss_pred hhcccchhhhh-hchhhhhhHHHHH
Q psy13565 103 QDQVAPFLFLQ-ITDAEKTTMEEAI 126 (182)
Q Consensus 103 d~~l~~~l~~~-l~~~~~~~l~~~~ 126 (182)
+..|..-|... +..+++.|. +.+
T Consensus 445 T~DIA~~Lg~~d~~~AErIK~-YG~ 468 (607)
T 1nbw_A 445 SLLIKTELGLEDLSLAEAIKK-YPL 468 (607)
T ss_dssp HHHHHHHHTCSCHHHHHHHHH-SCE
T ss_pred HHHHHHHhCCCCHHHHHHhcc-cCc
Confidence 99999998877 777777766 444
No 22
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.73 E-value=7.9e-08 Score=79.15 Aligned_cols=100 Identities=16% Similarity=0.023 Sum_probs=78.6
Q ss_pred CeEEEecCCCCCHHHHHHHHHHH-HHcCCcEEEeecchhHHHHHhhcccc--cCceeEEEEecCCceEEEEEEEEeCCce
Q psy13565 14 THAVVTVPAYFNDAQRQATKDAG-VIAGLTVMRIINEPTAAAIAYGLDKK--EGEKNVLVFDLGGGTFDVSLLTIDNDHR 90 (182)
Q Consensus 14 ~~~vitvP~~~~~~~r~~l~~a~-~~ag~~~~~~i~ep~Aaa~~~~~~~~--~~~~~vlv~D~G~gt~dvsv~~~~~~~~ 90 (182)
..+++|.|.......|+.+.+.+ +..|++.+.++.+|.+++++.+.... ....+.+|+|+|+|+|+++.+. .+...
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~-~G~~l 202 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA-EGYVI 202 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE-TTEEC
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE-CCEEe
Confidence 47999999999999999988877 78999999999999999998874321 1135689999999999999984 33333
Q ss_pred e--eccCCCCcchhhhcccchhhhhh
Q psy13565 91 R--RKDHHGGGDRRQDQVAPFLFLQI 114 (182)
Q Consensus 91 ~--~~~~~~GG~~id~~l~~~l~~~l 114 (182)
. +....+||+++|+.|.++|..+.
T Consensus 203 ~~~~~rl~~gG~~lt~~L~~lL~~~~ 228 (427)
T 3dwl_A 203 GSSIKTMPLAGRDVTYFVQSLLRDRN 228 (427)
T ss_dssp GGGCEEESCCHHHHHHHHHHTTC---
T ss_pred hhhheeccccHHHHHHHHHHHHHHcC
Confidence 3 33457999999999998887653
No 23
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.55 E-value=2.1e-07 Score=77.85 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=75.2
Q ss_pred eEEEecCCCCCHHHHHHHHHH-HHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee--
Q psy13565 15 HAVVTVPAYFNDAQRQATKDA-GVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-- 91 (182)
Q Consensus 15 ~~vitvP~~~~~~~r~~l~~a-~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-- 91 (182)
.++++.|.......|+.+.+. ++..|++-+.++.+|.+++++++. .+.+|+|+|+|+|+++.+. ++...
T Consensus 116 pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~------~tglVVDiG~g~T~vvPI~--~G~~l~~ 187 (498)
T 3qb0_A 116 PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGR------PNCLVVDIGHDTCSVSPIV--DGMTLSK 187 (498)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTC------SSEEEEEECSSCEEEEEEE--TTEECGG
T ss_pred ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCC------CeEEEEEcCCCcEEEEEEe--CCEEccc
Confidence 589999999999899988886 488999999999999999998875 2359999999999999985 34333
Q ss_pred -eccCCCCcchhhhcccchhhh
Q psy13565 92 -RKDHHGGGDRRQDQVAPFLFL 112 (182)
Q Consensus 92 -~~~~~~GG~~id~~l~~~l~~ 112 (182)
+....+||+++|+.|.++|..
T Consensus 188 ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 188 STRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp GCEEESCSHHHHHHHHHHHTTT
T ss_pred cceeccccHHHHHHHHHHHHHh
Confidence 234579999999999988874
No 24
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.54 E-value=7.1e-07 Score=76.20 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=77.4
Q ss_pred CeEEEecCCCCCHHHHHHHHHHH-HHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCcee-
Q psy13565 14 THAVVTVPAYFNDAQRQATKDAG-VIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR- 91 (182)
Q Consensus 14 ~~~vitvP~~~~~~~r~~l~~a~-~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~- 91 (182)
..++++.|..+....|+.+.+.+ +..|++.+.++.+|.+++++++. ..+.+|+|+|+|+|+++.+. +|...
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~ttGLVVDiG~g~T~VvPV~--eG~vl~ 294 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STSTCVVNIGAAETRIACVD--EGTVLE 294 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSCEEEEEECSSCEEEEEEE--TTEECG
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCceEEEcCCCceEEEEEEe--CCEEEh
Confidence 36999999999999999988876 57899999999999999998863 24679999999999999985 44333
Q ss_pred --eccCCCCcchhhhcccchhhhh
Q psy13565 92 --RKDHHGGGDRRQDQVAPFLFLQ 113 (182)
Q Consensus 92 --~~~~~~GG~~id~~l~~~l~~~ 113 (182)
+....+||+++|+.|.++|..+
T Consensus 295 ~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 295 HSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp GGCEEESCCHHHHHHHHHHHHHHT
T ss_pred hheeeecchHHHHHHHHHHHHHHc
Confidence 2346799999999999988865
No 25
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.52 E-value=5e-08 Score=77.71 Aligned_cols=97 Identities=20% Similarity=0.093 Sum_probs=72.7
Q ss_pred CeEEEecCCCCCHH--HHHHHHHHHHHc---C-----------CcEEEeecchhHHHHHhhcccccCceeEEEEecCCce
Q psy13565 14 THAVVTVPAYFNDA--QRQATKDAGVIA---G-----------LTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGT 77 (182)
Q Consensus 14 ~~~vitvP~~~~~~--~r~~l~~a~~~a---g-----------~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt 77 (182)
-.++++.|..+-.. +|+.+++.+..- . +..+.+++||.++.+... . ..+..+++++|||+||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~-~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E-NFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C-CCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h-hhccCCEEEEEeCCCc
Confidence 47999999987643 577787777631 1 245778889988877652 2 2367889999999999
Q ss_pred EEEEEEEEeCCceee---ccCCCCcchhhhcccchhhh-hh
Q psy13565 78 FDVSLLTIDNDHRRR---KDHHGGGDRRQDQVAPFLFL-QI 114 (182)
Q Consensus 78 ~dvsv~~~~~~~~~~---~~~~~GG~~id~~l~~~l~~-~l 114 (182)
||+++++ ++.... ....+||+++++.|.+++.. ++
T Consensus 184 td~~v~~--~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~ 222 (329)
T 4apw_A 184 MGFSLYR--NCVVNPSERFIEEHGVKDLIIRVGDALTDLNN 222 (329)
T ss_dssp EEEEEEE--TTEECGGGCEEESCCHHHHHHHHHTSSSSCSS
T ss_pred EEEEEEE--CCEEeeccccchhhHHHHHHHHHHHHHHhhcc
Confidence 9999998 454432 35679999999999998887 54
No 26
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.46 E-value=8.4e-07 Score=75.68 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=80.1
Q ss_pred hHhCCccCe-----EEEecCCCCCHHHHHHHHHH-HHHcCCcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEE
Q psy13565 7 AYLGKKVTH-----AVVTVPAYFNDAQRQATKDA-GVIAGLTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV 80 (182)
Q Consensus 7 ~~~g~~~~~-----~vitvP~~~~~~~r~~l~~a-~~~ag~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dv 80 (182)
+.++.++.+ ++++.|..++...|+.|.+. ++.-|++-+.++.++.+++++++. .+.+|||+|++.|.|
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~------~tglVVDiG~~~T~v 260 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL------SSTCIVDVGDQKTSV 260 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC------SEEEEEEECSSCEEE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC------CceEEEEeCCCceee
Confidence 456665543 99999999999998886665 677899999999999999998865 467999999999999
Q ss_pred EEEEEeCCcee--eccCCCCcchhhhcccchhhhh
Q psy13565 81 SLLTIDNDHRR--RKDHHGGGDRRQDQVAPFLFLQ 113 (182)
Q Consensus 81 sv~~~~~~~~~--~~~~~~GG~~id~~l~~~l~~~ 113 (182)
+-+. ++.... +....+||+++++.|...|..+
T Consensus 261 ~PV~-dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 261 CCVE-DGVSHRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EEEE-SSCBCGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred eeeE-CCEEehhheEEecccHHHHHHHHHHHHHhc
Confidence 9884 333332 3456789999999998888754
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.27 E-value=0.0012 Score=51.95 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-cCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchhhhc
Q psy13565 28 QRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-EGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRRQDQ 105 (182)
Q Consensus 28 ~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~id~~ 105 (182)
...++..+-+..|+++.-+-.+.+|...+.+.... ......+++|+|||+|++++++ ++... ....++|+-.+.+.
T Consensus 99 ~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~~~~Sl~~G~v~l~e~ 176 (315)
T 1t6c_A 99 AEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVREVISLPIGIVNLTET 176 (315)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEEEEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCceeeEEEEeccHHHHHHH
Confidence 45566666668899886555566665444433322 1245689999999999999986 44433 44677898887776
Q ss_pred cc
Q psy13565 106 VA 107 (182)
Q Consensus 106 l~ 107 (182)
+.
T Consensus 177 ~~ 178 (315)
T 1t6c_A 177 FF 178 (315)
T ss_dssp HC
T ss_pred hc
Confidence 54
No 28
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=97.26 E-value=0.00034 Score=47.34 Aligned_cols=62 Identities=48% Similarity=0.868 Sum_probs=47.9
Q ss_pred hhhhhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhccCCCCCC
Q psy13565 110 LFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAPP 171 (182)
Q Consensus 110 l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~~~~~~~~ 171 (182)
+..+++..++.++...+...++||..+..+....+.-..++|++++.|++.++++.++++|+
T Consensus 39 ~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y~~~~~~~~ 100 (120)
T 2p32_A 39 LKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPP 100 (120)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCC------
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 34567888999999999999999986555567889999999999999999999864444443
No 29
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=97.25 E-value=0.0004 Score=46.45 Aligned_cols=56 Identities=45% Similarity=0.727 Sum_probs=49.7
Q ss_pred hhhhhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhcc
Q psy13565 110 LFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQG 165 (182)
Q Consensus 110 l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~~ 165 (182)
+..+++...+.++...+..+++||..+..+....+.-..++|+.++.|++.+++++
T Consensus 30 ~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~y~~ 85 (113)
T 3lof_A 30 LKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQG 85 (113)
T ss_dssp GBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567888999999999999999998776778889999999999999999999975
No 30
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=96.83 E-value=0.00088 Score=44.66 Aligned_cols=61 Identities=48% Similarity=0.809 Sum_probs=48.6
Q ss_pred hhhhhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhccCCCCC
Q psy13565 110 LFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAP 170 (182)
Q Consensus 110 l~~~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~~~~~~~ 170 (182)
+..+++..++.++...+...++||..+..+....+.-..++|+.++.++..++++..+++|
T Consensus 25 ~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~~~~~ 85 (113)
T 1ud0_A 25 LQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMP 85 (113)
T ss_dssp GTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 3456788899999999999999997554345677888899999999999999986544433
No 31
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.75 E-value=0.0015 Score=50.18 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=51.5
Q ss_pred cEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCceee----ccCCCCcchhhhcccchhhhhhch
Q psy13565 42 TVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRR----KDHHGGGDRRQDQVAPFLFLQITD 116 (182)
Q Consensus 42 ~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~~----~~~~~GG~~id~~l~~~l~~~l~~ 116 (182)
.....|+||+|.++++..... ....++|+|||++++.++. .++.+.+ .....|+.++++.++.++...+++
T Consensus 72 ~~~~~Vne~~aha~a~~~~~~---~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~ 146 (276)
T 4ehu_A 72 DADKQISELSCHARGVNFIIP---ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSE 146 (276)
T ss_dssp SCSEECCHHHHHHHHHHHHST---TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGG
T ss_pred CCCcccchHHHHHHHHHHhCC---CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhh
Confidence 456889999999988765443 3347899999999999884 3444431 345567788888888888766654
No 32
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.68 E-value=0.006 Score=48.00 Aligned_cols=76 Identities=18% Similarity=0.317 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCcEEEeec-chhHHHHHhhcccc--cCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchhh
Q psy13565 28 QRQATKDAGVIAGLTVMRIIN-EPTAAAIAYGLDKK--EGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRRQ 103 (182)
Q Consensus 28 ~r~~l~~a~~~ag~~~~~~i~-ep~Aaa~~~~~~~~--~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~id 103 (182)
...++..+-+..|+++ .+|+ +-.|--.+.+.... ......+++|+|||+|++++++ ++... ....++|.-.+.
T Consensus 91 ~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~Sl~lG~vrl~ 167 (315)
T 3mdq_A 91 KQVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILWKQSFEIGGQRLI 167 (315)
T ss_dssp HHHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEEEEEESCCHHHHH
T ss_pred HHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEeeeEEEechhhHHH
Confidence 4566777777789987 5555 44444333332222 2235689999999999999996 44333 345677777666
Q ss_pred hcc
Q psy13565 104 DQV 106 (182)
Q Consensus 104 ~~l 106 (182)
+.+
T Consensus 168 e~f 170 (315)
T 3mdq_A 168 DRF 170 (315)
T ss_dssp HHS
T ss_pred HHh
Confidence 654
No 33
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=96.55 E-value=0.013 Score=49.06 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCCcEEEeecchhHHHHHh-hcccccCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchhhhc
Q psy13565 28 QRQATKDAGVIAGLTVMRIINEPTAAAIAY-GLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRRQDQ 105 (182)
Q Consensus 28 ~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~-~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~id~~ 105 (182)
...++..+-+..|+++ .+|+...=|.+.| +....-.....+++|+|||+|++++++ ++... ....++|.-.+.+.
T Consensus 102 ~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~~~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 102 GPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSCGEGITLPLGGLRLSEQ 178 (508)
T ss_dssp HHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEECCCEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCeeeeEEEecceEEehhhc
Confidence 4566777777889977 6666555544333 322221223459999999999999997 54443 33556777666553
No 34
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.53 E-value=0.0072 Score=48.16 Aligned_cols=79 Identities=18% Similarity=0.231 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCcEEEeecchhHHHHHh-hcccc--c--CceeEEEEecCCceEEEEEEEEeCCc-----eeeccCCC
Q psy13565 28 QRQATKDAGVIAGLTVMRIINEPTAAAIAY-GLDKK--E--GEKNVLVFDLGGGTFDVSLLTIDNDH-----RRRKDHHG 97 (182)
Q Consensus 28 ~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~-~~~~~--~--~~~~vlv~D~G~gt~dvsv~~~~~~~-----~~~~~~~~ 97 (182)
...++..+-+..|+++ .+|+...=|.+.| +.... . ....++++|+|||+|+++++.-.... ......++
T Consensus 104 ~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slpl 182 (343)
T 3cer_A 104 REEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESC
T ss_pred HHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEeh
Confidence 4556777777789976 6666555554443 32222 2 23568999999999999998630022 12345678
Q ss_pred Ccchhhhccc
Q psy13565 98 GGDRRQDQVA 107 (182)
Q Consensus 98 GG~~id~~l~ 107 (182)
|+..+.+.+.
T Consensus 183 G~v~lt~~~~ 192 (343)
T 3cer_A 183 GSVRMTERHL 192 (343)
T ss_dssp CHHHHHHHTC
T ss_pred hHHHHHHHhc
Confidence 9988877764
No 35
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.08 E-value=0.018 Score=48.38 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCcEEEeecchhHHHHHh-hcccc-cCceeEEEEecCCceEEEEEEEEeCCcee-eccCCCCcchhhh
Q psy13565 28 QRQATKDAGVIAGLTVMRIINEPTAAAIAY-GLDKK-EGEKNVLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRRQD 104 (182)
Q Consensus 28 ~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~-~~~~~-~~~~~vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~id~ 104 (182)
...++..+-+..|+++ .+|+...=|.+.| +.... ......+++|||||+|++++.+ ++... ....++|.-.+.+
T Consensus 98 ~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~Sl~lG~vrlte 174 (513)
T 1u6z_A 98 ATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPILVESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEEEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeEEEEEeccHHHHHH
Confidence 3456666667779977 6666555554443 22222 1122689999999999999986 44443 3356778777766
Q ss_pred ccc
Q psy13565 105 QVA 107 (182)
Q Consensus 105 ~l~ 107 (182)
.+.
T Consensus 175 ~f~ 177 (513)
T 1u6z_A 175 LYF 177 (513)
T ss_dssp HHS
T ss_pred HHc
Confidence 543
No 36
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=91.13 E-value=0.22 Score=36.96 Aligned_cols=49 Identities=24% Similarity=0.318 Sum_probs=40.2
Q ss_pred hhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 113 QITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 113 ~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
+++..++.++...+...++||..+ +...+.-.+++|++++.|++.+..+
T Consensus 168 ~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 168 KLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456677888999999999999876 4567888999999999999998775
No 37
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=91.09 E-value=0.22 Score=39.28 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=23.4
Q ss_pred chhHHHHHhhcccccCceeEEEEecCCceEEEEEEE
Q psy13565 49 EPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 49 ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~ 84 (182)
-|.|.+...+... . ...+++|||+.|||+..+.
T Consensus 113 nw~ASa~~~A~~~--~-~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 113 NWCGTAKWVSKNI--E-ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp SSHHHHHHHHHHT--C-SSEEEEEECSSCEEEEEEE
T ss_pred CHHHHHHHHHHhc--C-CCEEEEEcCcchhhhhhhc
Confidence 5566666433321 1 3589999999999999987
No 38
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=89.36 E-value=0.57 Score=37.27 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHc-------CCcEEEeecchhHHHHHh-----hcccc--cCceeEEEEecCCceEEEEEEE
Q psy13565 28 QRQATKDAGVIA-------GLTVMRIINEPTAAAIAY-----GLDKK--EGEKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 28 ~r~~l~~a~~~a-------g~~~~~~i~ep~Aaa~~~-----~~~~~--~~~~~vlv~D~G~gt~dvsv~~ 84 (182)
+...|..+-+.. |+. +.+|+...=+.+.| .+..- ....+++++|||||+|.++...
T Consensus 89 ~~~~l~~v~~~~~~~~~~~g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 89 QKKYYDELEYWFRQQSQWQLVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCCCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 334455555555 664 46776554443332 22211 1234699999999999999874
No 39
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=85.93 E-value=1.6 Score=32.34 Aligned_cols=49 Identities=14% Similarity=0.245 Sum_probs=40.2
Q ss_pred hhchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 113 QITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 113 ~l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
.++..++.++...+...++||..+ ....+.-..++|++++.|+..+.+.
T Consensus 165 ~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~ 213 (227)
T 1u00_A 165 LLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMD 213 (227)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788899999999999854 3567889999999999999988764
No 40
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=84.66 E-value=1.5 Score=37.89 Aligned_cols=52 Identities=23% Similarity=0.365 Sum_probs=42.1
Q ss_pred hhchhhhhhHHHHHHHHHhcccccc-cCCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 113 QITDAEKTTMEEAIDDKIKWLDENQ-DADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 113 ~l~~~~~~~l~~~~~~~k~~L~~~~-~~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
.++..++.++...+....+||..+. .+....+.-..++|++++.|+..+..+
T Consensus 574 ~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e 626 (675)
T 3d2f_A 574 FASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLA 626 (675)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777889999999999997543 455677888999999999999988775
No 41
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=80.22 E-value=3.8 Score=33.75 Aligned_cols=20 Identities=25% Similarity=0.478 Sum_probs=17.2
Q ss_pred ceeEEEEecCCceEEEEEEE
Q psy13565 65 EKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 65 ~~~vlv~D~G~gt~dvsv~~ 84 (182)
...++++|||||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999884
No 42
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=78.42 E-value=1.9 Score=36.70 Aligned_cols=48 Identities=25% Similarity=0.314 Sum_probs=38.7
Q ss_pred hchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 114 ITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 114 l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
++..++.++...++..++||..+ ....+.-.+++|++.+.|++.++++
T Consensus 557 ~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 557 LPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667778888899999999865 3567888999999999999998874
No 43
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=76.97 E-value=2.1 Score=36.50 Aligned_cols=48 Identities=25% Similarity=0.314 Sum_probs=38.9
Q ss_pred hchhhhhhHHHHHHHHHhcccccccCCchhhhhcHHHHHHHHHHHHHHHhc
Q psy13565 114 ITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQ 164 (182)
Q Consensus 114 l~~~~~~~l~~~~~~~k~~L~~~~~~~~~~~~itr~el~~~i~p~l~~~~~ 164 (182)
++.+++.++...++..++||..+ +...+.-.+++|++++.|+..++++
T Consensus 557 ~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 557 LPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667778888899999999853 5577889999999999999998764
No 44
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=65.70 E-value=14 Score=30.41 Aligned_cols=43 Identities=23% Similarity=0.386 Sum_probs=26.5
Q ss_pred cEEEeecchhHHHH-----Hhhcccc--cCceeEEEEecCCceEEEEEEE
Q psy13565 42 TVMRIINEPTAAAI-----AYGLDKK--EGEKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 42 ~~~~~i~ep~Aaa~-----~~~~~~~--~~~~~vlv~D~G~gt~dvsv~~ 84 (182)
..+.+|+...=+.+ .|.+..- ....++.++|||||+|.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 35677775544433 2222211 1235678999999999999875
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=59.92 E-value=12 Score=29.69 Aligned_cols=40 Identities=23% Similarity=0.401 Sum_probs=26.2
Q ss_pred EEEEecCCceEEEEEEEEe-CCcee-eccCCCCcchhhhcccchhh
Q psy13565 68 VLVFDLGGGTFDVSLLTID-NDHRR-RKDHHGGGDRRQDQVAPFLF 111 (182)
Q Consensus 68 vlv~D~G~gt~dvsv~~~~-~~~~~-~~~~~~GG~~id~~l~~~l~ 111 (182)
.+++|||+|+ +++++. ++.+. +....+||-.|=.... .|.
T Consensus 177 yllVnIGsGv---Siikv~~~~~f~rvgG~siGGGTflGL~~-lLt 218 (360)
T 2i7n_A 177 MLLVNMGSGV---SILAVYSKDNYKRVTGTSLGGGTFLGLCC-LLT 218 (360)
T ss_dssp EEEEEESSSE---EEEEEEETTEEEEEEEESCSHHHHHHHHH-HHH
T ss_pred eEEEEeCCCc---EEEEEcCCCCEEEeccccCccHhHHHHHH-HHh
Confidence 6799999987 566665 44454 5567777777655544 443
No 46
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=59.74 E-value=19 Score=27.00 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=26.6
Q ss_pred EeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEeCCc
Q psy13565 45 RIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDH 89 (182)
Q Consensus 45 ~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~~~~ 89 (182)
.+++|++|.+.....-.. ... .++|+||+++.+..++ ++.
T Consensus 78 ~~v~Ei~ah~~ga~~~~~--~~~-~vidiGGqd~k~i~~~--~g~ 117 (270)
T 1hux_A 78 KQMSELSCHAMGASFIWP--NVH-TVIDIGGQDVKVIHVE--NGT 117 (270)
T ss_dssp EEECHHHHHHHHHHHHCT--TCC-EEEEEETTEEEEEEEE--TTE
T ss_pred CCcccHHHHHHHHHHhCC--CCC-EEEEECCCceEEEEEe--CCc
Confidence 568899998754422211 122 5899999999888874 553
No 47
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=58.42 E-value=45 Score=24.76 Aligned_cols=71 Identities=18% Similarity=0.252 Sum_probs=37.5
Q ss_pred ccCeEEEecCCCCCHHHHHHHHHHHHH-cCCcEEEe----------ecch-------hHHHHHhhcccccCceeEEEEec
Q psy13565 12 KVTHAVVTVPAYFNDAQRQATKDAGVI-AGLTVMRI----------INEP-------TAAAIAYGLDKKEGEKNVLVFDL 73 (182)
Q Consensus 12 ~~~~~vitvP~~~~~~~r~~l~~a~~~-ag~~~~~~----------i~ep-------~Aaa~~~~~~~~~~~~~vlv~D~ 73 (182)
++..++++.|. +.....+..+++. .+..+..+ .+.| .+++++... . .+..++|+|+
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~-~--~~~~~iVvD~ 129 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVK-E--YGKNGIIIDM 129 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHH-H--TCSCEEEEEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHH-H--cCCCEEEEEc
Confidence 46778888774 5555566665553 34433221 2223 133333311 1 1357999999
Q ss_pred CCceEEEEEEEEeCCcee
Q psy13565 74 GGGTFDVSLLTIDNDHRR 91 (182)
Q Consensus 74 G~gt~dvsv~~~~~~~~~ 91 (182)
|..+| +.++. ++.+.
T Consensus 130 GTA~T-~d~v~--~g~~l 144 (249)
T 3bex_A 130 GTATT-VDLVV--NGSYE 144 (249)
T ss_dssp SSEEE-EEEEE--TTEEE
T ss_pred CCceE-EEEEe--CCeEe
Confidence 96554 44443 55555
No 48
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=55.20 E-value=12 Score=23.31 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=25.8
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCcE
Q psy13565 15 HAVVTVPAYFNDAQRQATKDAGVIAGLTV 43 (182)
Q Consensus 15 ~~vitvP~~~~~~~r~~l~~a~~~ag~~~ 43 (182)
.-.+.-|+.++..+|..+.+.|+..||..
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 45778899999999999999999999965
No 49
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=51.43 E-value=66 Score=25.10 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=40.3
Q ss_pred CceeEEEEecCCceEEEEEEEEeC-Cceeec-----cCCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhcccccc
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDN-DHRRRK-----DHHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQ 137 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~-~~~~~~-----~~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~~ 137 (182)
....+.++|+|..++-..|++..+ +.+.+. ...+|- .++. ...++++...+..++++..++.+...+
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~-g~~~------~g~ls~eai~r~~~aL~~f~~~~~~~~ 86 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQ-DVDK------THRFADEALERAYVAAREFAGVIAEHP 86 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTT-THHH------HSSCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCC-Cccc------cCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 445789999999999999999873 333321 122332 2221 134566666666666666666665443
No 50
>2kp6_A Uncharacterized protein; unknown function, structural genomics, PSI-2, protein struct initiative; NMR {Chromobacterium violaceum}
Probab=51.42 E-value=12 Score=23.09 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=16.8
Q ss_pred EEEecCCCCCHHHHHHHHHHHH
Q psy13565 16 AVVTVPAYFNDAQRQATKDAGV 37 (182)
Q Consensus 16 ~vitvP~~~~~~~r~~l~~a~~ 37 (182)
+-+.=-.||++.||.+|+++..
T Consensus 40 ~~L~dApFWt~sQ~~FL~E~~~ 61 (82)
T 2kp6_A 40 VPLPEAPFWTPAQAAFLRQALE 61 (82)
T ss_dssp SCSTTCTTSCHHHHHHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHHHHHH
Confidence 3333345999999999999875
No 51
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=43.92 E-value=54 Score=27.13 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHcCCc--EEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEEe
Q psy13565 26 DAQRQATKDAGVIAGLT--VMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTID 86 (182)
Q Consensus 26 ~~~r~~l~~a~~~ag~~--~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~~ 86 (182)
..-.+.|++++++-|++ +..++|+.+|++++..... ....+-+=+|.|+--..+.+..
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~---~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD---PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEEEGG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC---CCcEEEEEEecCcceEEEeecc
Confidence 45677899999888886 4799999999988876543 3456666688777555555443
No 52
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=40.81 E-value=61 Score=19.79 Aligned_cols=40 Identities=18% Similarity=0.083 Sum_probs=33.9
Q ss_pred ccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchh
Q psy13565 12 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPT 51 (182)
Q Consensus 12 ~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~ 51 (182)
+-..++|..-..-....--.+.++++.+|+..+.++.++.
T Consensus 56 ~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t~~~ 95 (99)
T 2pfu_A 56 KDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET 95 (99)
T ss_dssp CSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTTCCC
T ss_pred CCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEecCc
Confidence 3456888888888888888899999999999999988764
No 53
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=36.68 E-value=75 Score=26.16 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcC---CcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEE
Q psy13565 26 DAQRQATKDAGVIAG---LTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTI 85 (182)
Q Consensus 26 ~~~r~~l~~a~~~ag---~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~ 85 (182)
..-.+.|++|+++-| +++..++|+.+|..++.+.... ...+-+=+|.|+--+.+-+.
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~---~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH---QCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCC---CceEEEEEecCCceEEeeec
Confidence 446778999998887 4689999999999887766543 34455557877755444443
No 54
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=36.45 E-value=40 Score=27.92 Aligned_cols=25 Identities=28% Similarity=0.577 Sum_probs=21.4
Q ss_pred CceeEEEEecCCceEEEEEEEEeCC
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDND 88 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~ 88 (182)
....++.+|+||+++-+.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457899999999999999998765
No 55
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=36.13 E-value=75 Score=26.30 Aligned_cols=65 Identities=11% Similarity=0.055 Sum_probs=37.3
Q ss_pred ceeEEEEecCCceEEEEEEEEeCCceeec-----cCCCCcchhhhcccchhhhhhchhhhhhHHHHHHHHHhccccc
Q psy13565 65 EKNVLVFDLGGGTFDVSLLTIDNDHRRRK-----DHHGGGDRRQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDEN 136 (182)
Q Consensus 65 ~~~vlv~D~G~gt~dvsv~~~~~~~~~~~-----~~~~GG~~id~~l~~~l~~~l~~~~~~~l~~~~~~~k~~L~~~ 136 (182)
...+.++|+|..++-..|++..++.+.+. ...+|. .++. ...++++...+..++++.-++.+...
T Consensus 10 ~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~-g~~~------~g~Ls~eai~r~~~~L~~f~~~~~~~ 79 (513)
T 1u6z_A 10 PQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLAD-GLGP------DNMLSEEAMTRGLNCLSLFAERLQGF 79 (513)
T ss_dssp --CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGG-GBCT------TCCBCHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccC-cccc------cCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 34689999999999999999877655522 122332 2111 12345555555555555555555433
No 56
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=35.96 E-value=1e+02 Score=23.58 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=21.8
Q ss_pred eeEEEEecCCceEEEEEEEEeCCcee
Q psy13565 66 KNVLVFDLGGGTFDVSLLTIDNDHRR 91 (182)
Q Consensus 66 ~~vlv~D~G~gt~dvsv~~~~~~~~~ 91 (182)
..+.++|+|..++-..|++..++.+.
T Consensus 12 m~~a~IDiGSns~rl~I~~~~~~~~~ 37 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIKDGKLS 37 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEE
T ss_pred cEEEEEEECcCcEEEEEEEEcCCcEE
Confidence 46889999999999999998766454
No 57
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=35.75 E-value=1.4e+02 Score=22.55 Aligned_cols=68 Identities=21% Similarity=0.327 Sum_probs=43.0
Q ss_pred ccCeEEEecCCCCCHH----------------HHHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-cCceeEEEEecC
Q psy13565 12 KVTHAVVTVPAYFNDA----------------QRQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-EGEKNVLVFDLG 74 (182)
Q Consensus 12 ~~~~~vitvP~~~~~~----------------~r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~~~~~vlv~D~G 74 (182)
++..+.|++|...+.. -++.|.+ ..|++ +.+.|+..|++++-..... ....+++++-+|
T Consensus 56 ~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~---~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 131 (321)
T 3vgl_A 56 DVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQ---RVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLG 131 (321)
T ss_dssp CEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHH---HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEES
T ss_pred CceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhh---hhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeC
Confidence 5667788888654432 1334443 34775 6899999999887533222 244678888899
Q ss_pred CceEEEEEEE
Q psy13565 75 GGTFDVSLLT 84 (182)
Q Consensus 75 ~gt~dvsv~~ 84 (182)
.| .-.+++.
T Consensus 132 tG-iG~gii~ 140 (321)
T 3vgl_A 132 TG-LGGGIII 140 (321)
T ss_dssp SS-EEEEEEE
T ss_pred cc-eEEEEEE
Confidence 77 5566664
No 58
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=35.00 E-value=41 Score=27.53 Aligned_cols=25 Identities=32% Similarity=0.607 Sum_probs=21.3
Q ss_pred CceeEEEEecCCceEEEEEEEEeCC
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDND 88 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~ 88 (182)
.....+.+|+||+++-|.++++.++
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~ 81 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG 81 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc
Confidence 3456899999999999999998765
No 59
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=34.76 E-value=45 Score=27.47 Aligned_cols=26 Identities=31% Similarity=0.565 Sum_probs=20.9
Q ss_pred CceeEEEEecCCceEEEEEEEEeCCc
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDNDH 89 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~~ 89 (182)
.....+.+|+||+++-|..+++.+..
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~ 100 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGE 100 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC--
T ss_pred cceEEEEEEecCceEEEEEEEECCCC
Confidence 34578999999999999999987654
No 60
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=32.90 E-value=63 Score=26.33 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHcCCc--EEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEE
Q psy13565 25 NDAQRQATKDAGVIAGLT--VMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 25 ~~~~r~~l~~a~~~ag~~--~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~ 84 (182)
...-.+.|++++.+.|++ +..++|+..|++++..... ...++-+=+|.|+=-.-+.+
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~---~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED---PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC---CCcEEEEEEeCCcceEEEEc
Confidence 345678899999877876 3599999999988876653 34667777887764444443
No 61
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=31.48 E-value=1.2e+02 Score=24.86 Aligned_cols=57 Identities=16% Similarity=0.235 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHcC---CcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEEEEEEEE
Q psy13565 26 DAQRQATKDAGVIAG---LTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTI 85 (182)
Q Consensus 26 ~~~r~~l~~a~~~ag---~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~dvsv~~~ 85 (182)
..-.+.|++++++-| +++..++|+.+|+.++.+.... ...+-+=+|.|+--..+.+.
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~---~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDP---RCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEEEEEEEEG
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCC---CceEEEEEeCCceEEEEEec
Confidence 345777888987753 5689999999999888765533 45555567877655444443
No 62
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=30.71 E-value=31 Score=26.36 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=20.1
Q ss_pred EEEEecCCceEEEEEEEEeCCcee-eccCCCCcchhh
Q psy13565 68 VLVFDLGGGTFDVSLLTIDNDHRR-RKDHHGGGDRRQ 103 (182)
Q Consensus 68 vlv~D~G~gt~dvsv~~~~~~~~~-~~~~~~GG~~id 103 (182)
.+++|+|++.. ++++.++.+. ......||-.|=
T Consensus 112 ~~vIdIGg~ds---ii~v~~~~f~r~~g~aaGgGtFl 145 (287)
T 2ews_A 112 YIFANVGTGTS---LHYFDGQSQRRVGGIGTGGGMIQ 145 (287)
T ss_dssp EEEEEESSSEE---EEEECSSCEEEEEEESCSHHHHH
T ss_pred eEEEEeCCCeE---EEEEcCCceEEcCccccchhhHH
Confidence 59999999855 5555555555 344445554433
No 63
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=30.56 E-value=62 Score=26.46 Aligned_cols=26 Identities=23% Similarity=0.540 Sum_probs=21.4
Q ss_pred CceeEEEEecCCceEEEEEEEEeCCc
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDNDH 89 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~~ 89 (182)
.....+.+|+||+++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 34567999999999999999877654
No 64
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=30.15 E-value=32 Score=25.83 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=15.8
Q ss_pred EEEEecCCceEEEEEEEEeCCc
Q psy13565 68 VLVFDLGGGTFDVSLLTIDNDH 89 (182)
Q Consensus 68 vlv~D~G~gt~dvsv~~~~~~~ 89 (182)
++-+|+||+++.+.++. .+..
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~i 22 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGAV 22 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSSE
T ss_pred EEEEEeccccEEEEEEc-CCeE
Confidence 46799999999999997 5443
No 65
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=29.93 E-value=52 Score=26.82 Aligned_cols=23 Identities=35% Similarity=0.642 Sum_probs=20.4
Q ss_pred ceeEEEEecCCceEEEEEEEEeC
Q psy13565 65 EKNVLVFDLGGGTFDVSLLTIDN 87 (182)
Q Consensus 65 ~~~vlv~D~G~gt~dvsv~~~~~ 87 (182)
...++.+|+||+++-+.++++.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 45689999999999999999876
No 66
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=28.91 E-value=1.9e+02 Score=22.01 Aligned_cols=27 Identities=30% Similarity=0.489 Sum_probs=22.1
Q ss_pred ceeEEEEecCCceEEEEEEEEeCCcee
Q psy13565 65 EKNVLVFDLGGGTFDVSLLTIDNDHRR 91 (182)
Q Consensus 65 ~~~vlv~D~G~gt~dvsv~~~~~~~~~ 91 (182)
...+.++|+|..++-..|++..++.+.
T Consensus 3 ~~~~A~IDiGSNsirL~I~~~~~~~~~ 29 (315)
T 3mdq_A 3 SQRIGVIDMGTNTFHLLITDIVNDRPH 29 (315)
T ss_dssp -CEEEEEEECSSEEEEEEEEEETTEEE
T ss_pred CceEEEEEecCCcEEEEEEEEcCCceE
Confidence 356899999999999999988776555
No 67
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=28.31 E-value=57 Score=25.61 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=19.5
Q ss_pred eeEEEEecCCceEEEEEEEEeC
Q psy13565 66 KNVLVFDLGGGTFDVSLLTIDN 87 (182)
Q Consensus 66 ~~vlv~D~G~gt~dvsv~~~~~ 87 (182)
..++++|+|..++-+-|+++.+
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~ 24 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDT 24 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcC
Confidence 4689999999999999999864
No 68
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=26.36 E-value=2.1e+02 Score=21.56 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=44.6
Q ss_pred CCccCeEEEecCCCCCHHH-------------HHHHHHH-HHHc-CCcEEEeecchhHHHHHhhcccc-cCceeEEEEec
Q psy13565 10 GKKVTHAVVTVPAYFNDAQ-------------RQATKDA-GVIA-GLTVMRIINEPTAAAIAYGLDKK-EGEKNVLVFDL 73 (182)
Q Consensus 10 g~~~~~~vitvP~~~~~~~-------------r~~l~~a-~~~a-g~~~~~~i~ep~Aaa~~~~~~~~-~~~~~vlv~D~ 73 (182)
..++..+.|++|...+... -..+.+. .+.. |++ +.+.|+..|+|++-..... ....+++++-+
T Consensus 74 ~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~ 152 (321)
T 3r8e_A 74 YPIVKGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLAL 152 (321)
T ss_dssp CTTCCEEEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCCeeEEEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 4556677777776433110 0112222 2344 664 6899999999876533222 24456788889
Q ss_pred CCceEEEEEEEEeCCcee
Q psy13565 74 GGGTFDVSLLTIDNDHRR 91 (182)
Q Consensus 74 G~gt~dvsv~~~~~~~~~ 91 (182)
|.| .-.+++. ++...
T Consensus 153 GtG-iG~gii~--~G~l~ 167 (321)
T 3r8e_A 153 GTG-VGSGVMM--NGKLF 167 (321)
T ss_dssp SSS-EEEEEEE--TTEEC
T ss_pred CCc-eEEEEEE--CCEEe
Confidence 877 5566664 45443
No 69
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=26.24 E-value=1e+02 Score=19.82 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=28.4
Q ss_pred ccCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhH
Q psy13565 12 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTA 52 (182)
Q Consensus 12 ~~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~A 52 (182)
.++.+++++|.. ....++.+.+.+...|+++ .+++....
T Consensus 65 ~id~viia~~~~-~~~~~~~i~~~l~~~gv~v-~~vP~~~~ 103 (141)
T 3nkl_A 65 CISTVLLAVPSA-SQVQKKVIIESLAKLHVEV-LTIPNLDD 103 (141)
T ss_dssp TCCEEEECCTTS-CHHHHHHHHHHHHTTTCEE-EECCCHHH
T ss_pred CCCEEEEeCCCC-CHHHHHHHHHHHHHcCCeE-EECCCHHH
Confidence 567899999964 3457777888888889975 56666553
No 70
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=26.08 E-value=51 Score=24.73 Aligned_cols=17 Identities=24% Similarity=0.301 Sum_probs=15.5
Q ss_pred EEEEecCCceEEEEEEE
Q psy13565 68 VLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 68 vlv~D~G~gt~dvsv~~ 84 (182)
++-+|+||+++.+.++.
T Consensus 2 ~lgiDiGGT~~~~~l~d 18 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK 18 (291)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeCccceEEEEEe
Confidence 57899999999999997
No 71
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=25.59 E-value=73 Score=26.05 Aligned_cols=25 Identities=20% Similarity=0.214 Sum_probs=21.3
Q ss_pred CceeEEEEecCCceEEEEEEEEeCC
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDND 88 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~~ 88 (182)
...+++|||+|..++-+-|+++...
T Consensus 32 ~~~y~~vID~GSns~Rl~Vy~~~~~ 56 (456)
T 3cj1_A 32 ALKYGIVLDAGSSHTSMFVYKWPAD 56 (456)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEETT
T ss_pred CceEEEEEEcCCCCeEEEEEEEcCC
Confidence 4568889999999999999998653
No 72
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=24.82 E-value=1.5e+02 Score=22.36 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=40.6
Q ss_pred cCeEEEecCCCCCHHH----------------HHHHHHHHHHcCCcEEEeecchhHHHHHhhcccc-cCceeEEEEecCC
Q psy13565 13 VTHAVVTVPAYFNDAQ----------------RQATKDAGVIAGLTVMRIINEPTAAAIAYGLDKK-EGEKNVLVFDLGG 75 (182)
Q Consensus 13 ~~~~vitvP~~~~~~~----------------r~~l~~a~~~ag~~~~~~i~ep~Aaa~~~~~~~~-~~~~~vlv~D~G~ 75 (182)
+..+.|++|...+... ++.|.+ ..+++ +.+.|+..|++++-..... ....+++++-+|.
T Consensus 81 i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~Gt 156 (327)
T 2ap1_A 81 KGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSA---RLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGT 156 (327)
T ss_dssp CCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHH---HHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESS
T ss_pred ccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHH---HHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECC
Confidence 5567888886544211 123332 34665 6899999999886432221 2345778888987
Q ss_pred ceEEEEEEE
Q psy13565 76 GTFDVSLLT 84 (182)
Q Consensus 76 gt~dvsv~~ 84 (182)
| .-.+++.
T Consensus 157 G-iG~giv~ 164 (327)
T 2ap1_A 157 G-VGGGLVL 164 (327)
T ss_dssp S-EEEEEEE
T ss_pred c-EEEEEEE
Confidence 7 4456553
No 73
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=23.51 E-value=65 Score=24.22 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=16.4
Q ss_pred eEEEEecCCceEEEEEEE
Q psy13565 67 NVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 67 ~vlv~D~G~gt~dvsv~~ 84 (182)
..+++|+|.+++.++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d 20 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD 20 (266)
T ss_dssp CEEEEEECSSEEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE
Confidence 478999999999999996
No 74
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=23.26 E-value=1.7e+02 Score=23.77 Aligned_cols=68 Identities=16% Similarity=0.255 Sum_probs=48.6
Q ss_pred cCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHH-HHHhhcccc-cCc--------------------eeEEE
Q psy13565 13 VTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAA-AIAYGLDKK-EGE--------------------KNVLV 70 (182)
Q Consensus 13 ~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aa-a~~~~~~~~-~~~--------------------~~vlv 70 (182)
+..+|+..|+..+ -.+..|++.+|++.+.-+--.-|+ |++|+.+-- ..+ ...+-
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~Vg 229 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAA 229 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCE
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccc
Confidence 5789999998333 356788999999999999988887 788875422 111 11244
Q ss_pred EecCCceEEEEEEE
Q psy13565 71 FDLGGGTFDVSLLT 84 (182)
Q Consensus 71 ~D~G~gt~dvsv~~ 84 (182)
+|+=+|=+++-|+-
T Consensus 230 IDm~AGPSEilViA 243 (434)
T 1kae_A 230 IDMPAGPSEVLVIA 243 (434)
T ss_dssp ESCCCCCCEEEEEE
T ss_pred cCCCCCCceEEEEe
Confidence 78888888888885
No 75
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=22.94 E-value=38 Score=19.61 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=21.9
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCcEE
Q psy13565 20 VPAYFNDAQRQATKDAGVIAGLTVM 44 (182)
Q Consensus 20 vP~~~~~~~r~~l~~a~~~ag~~~~ 44 (182)
||.|.....|+.+...++..|++.+
T Consensus 16 IP~FVR~kvrr~tE~~Are~G~~~I 40 (62)
T 2l09_A 16 IPFFARSQAKARIEQLARQAEQDIV 40 (62)
T ss_dssp SCGGGHHHHHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCeE
Confidence 7888888899999999999999864
No 76
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=22.92 E-value=41 Score=28.54 Aligned_cols=19 Identities=16% Similarity=0.312 Sum_probs=16.6
Q ss_pred ceeEEEEecCCceEEEEEE
Q psy13565 65 EKNVLVFDLGGGTFDVSLL 83 (182)
Q Consensus 65 ~~~vlv~D~G~gt~dvsv~ 83 (182)
..++.++|+||++|.|+..
T Consensus 246 ~~TvG~LDLGGASTQIaF~ 264 (611)
T 4a57_A 246 NDLAGVVEVGGASAQIVFP 264 (611)
T ss_dssp CCCCEEEEECSSCEEEEEE
T ss_pred CceeEEEeeCCceEEEEec
Confidence 4678999999999999975
No 77
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=22.39 E-value=71 Score=23.53 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=15.4
Q ss_pred eEEEEecCCceEEEEEEE
Q psy13565 67 NVLVFDLGGGTFDVSLLT 84 (182)
Q Consensus 67 ~vlv~D~G~gt~dvsv~~ 84 (182)
.++=+|+|+.+|++.++.
T Consensus 2 ~~lGID~GsT~tk~av~d 19 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK 19 (276)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred eEEEEEcCccEEEEEEEE
Confidence 467799999999999886
No 78
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=22.31 E-value=70 Score=24.05 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=18.4
Q ss_pred eeEEEEecCCceEEEEEEEEeC
Q psy13565 66 KNVLVFDLGGGTFDVSLLTIDN 87 (182)
Q Consensus 66 ~~vlv~D~G~gt~dvsv~~~~~ 87 (182)
..++-+|+|++++.+.++...+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G 32 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDG 32 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTC
T ss_pred CEEEEEEcCccceEEEEEcCCC
Confidence 3689999999999999987443
No 79
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=20.89 E-value=2.7e+02 Score=20.95 Aligned_cols=62 Identities=6% Similarity=-0.062 Sum_probs=43.0
Q ss_pred ccCeEEEecCCCCCHHHHHHHHHHHHHc-C--CcEEEeecchhHHHHHhhcccccCceeEEEEecCCceEE
Q psy13565 12 KVTHAVVTVPAYFNDAQRQATKDAGVIA-G--LTVMRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFD 79 (182)
Q Consensus 12 ~~~~~vitvP~~~~~~~r~~l~~a~~~a-g--~~~~~~i~ep~Aaa~~~~~~~~~~~~~vlv~D~G~gt~d 79 (182)
++..+.|++|...+......+.+.++.. + .-++.+.|+..|+++++ . . .+.+++-+|.|.--
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~---~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P---DGGVVLISGTGSNC 134 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S---SCEEEEEESSSEEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C---CCcEEEEEcCCcee
Confidence 5778999999988876666677666543 3 13568999999999884 2 1 34556666776543
No 80
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=20.53 E-value=61 Score=26.31 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=47.7
Q ss_pred cCeEEEecCCCCCHHHHHHHHHHHHHcCCcEEEeecchhHH-HHHhhccccc-Cce-----------------eEEEEec
Q psy13565 13 VTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAA-AIAYGLDKKE-GEK-----------------NVLVFDL 73 (182)
Q Consensus 13 ~~~~vitvP~~~~~~~r~~l~~a~~~ag~~~~~~i~ep~Aa-a~~~~~~~~~-~~~-----------------~vlv~D~ 73 (182)
+..+|++.|+. +..---.+..|++.+|++.+.-+.-.-|+ |++|+.+.-. .+. +.+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 46788888872 11112357788999999999999888887 6888654320 110 1245677
Q ss_pred CCceEEEEEEE
Q psy13565 74 GGGTFDVSLLT 84 (182)
Q Consensus 74 G~gt~dvsv~~ 84 (182)
=+|=+++.|+-
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 77888888875
No 81
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=20.38 E-value=98 Score=25.30 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=20.9
Q ss_pred CceeEEEEecCCceEEEEEEEEeC
Q psy13565 64 GEKNVLVFDLGGGTFDVSLLTIDN 87 (182)
Q Consensus 64 ~~~~vlv~D~G~gt~dvsv~~~~~ 87 (182)
...+.+|+|+|..++-+-|+++..
T Consensus 32 ~~~y~iviDaGSsgtRl~VY~~~~ 55 (452)
T 3zx3_A 32 NVKYGIVLDAGSSHTNLYIYKWPA 55 (452)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEEC
T ss_pred CceEEEEEEcCCCCcEEEEEEEeC
Confidence 456788999999999999999865
Done!