RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13565
(182 letters)
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 183
Score = 109 bits (273), Expect = 4e-31
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLD 60
MK+TAE YLG+ VT AV+TVPAYFNDAQRQATKDAG IAGL V RIINEPTAAA+AYGLD
Sbjct: 121 MKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLD 180
Query: 61 KK 62
K
Sbjct: 181 KG 182
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 185
Score = 101 bits (253), Expect = 3e-28
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLD 60
MKE AEAYLGK VT+AVVTVPAYFND+QRQATKDAG IAGL V+RIINEPTAAAIAYGLD
Sbjct: 124 MKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLD 183
Query: 61 KK 62
KK
Sbjct: 184 KK 185
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 79.0 bits (195), Expect = 2e-20
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 114 ITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAGGAPP 171
I D +K + + ++ I WLD+NQ A+ EF+ ++KELE V PII KLYQ AGG P
Sbjct: 26 INDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 83
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 137
Score = 70.6 bits (172), Expect = 1e-16
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 1 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLTVMRIINEPTAAAIAYGLD 60
A+ + V+ VP D +R+A DAG+ AG + + +I EP AAAI G +
Sbjct: 80 FINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAI--GSN 137
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM
{Escherichia coli [TaxId: 562]}
Length = 163
Score = 49.1 bits (116), Expect = 2e-08
Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 2/109 (1%)
Query: 61 KKEGEKNVLVFDLGGGTFDVSLLT--IDNDHRRRKDHHGGGDRRQDQVAPFLFLQITDAE 118
+ + ++L+ DLGG T D+S + + + D G V L L T
Sbjct: 2 ELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKGS 61
Query: 119 KTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKLYQGAG 167
++ I + Q + E + + +
Sbjct: 62 SYLADDIIIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTL 110
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 193
Score = 48.8 bits (116), Expect = 3e-08
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 64 GEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHG 97
E+NVL+FDLGGGTFDVS+LTI++ K G
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 36
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 48.8 bits (116), Expect = 3e-08
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Query: 64 GEKNVLVFDLGGGTFDVSLLTIDNDHRRRK--------DHHGGGD 100
G + + V+DLGGGTFD+S++ ID + D H GG+
Sbjct: 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 45
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 196
Score = 43.8 bits (102), Expect = 2e-06
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 59 LDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHGGGDRRQDQV 106
L+ +E +V D+GGGT +V+++++ + G + + V
Sbjct: 1 LNVEE-PSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIV 47
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 161
Score = 39.4 bits (91), Expect = 6e-05
Identities = 11/107 (10%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 62 KEGEKNVLVFDLGGGTFDVSLLTIDN---DHRRRKDHHGGGDRRQDQVAPFLFLQITDAE 118
++ +V D+G T DV + + + G ++ + +
Sbjct: 2 EQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVV 61
Query: 119 KTTMEEAIDDKIKWLDENQDADAPEFQKKKKEL-EDVVQPIIAKLYQ 164
+ + + Q ++L +++ I L
Sbjct: 62 PFDLAQEALSHPVMFRQKQVGGPEVSGPILEDLANRIIENIRLNLRG 108
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 35.3 bits (81), Expect = 8e-04
Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Query: 86 DNDHRRRKDHHGGGDRRQDQVAPFLFL---QITDAEKTTMEEAIDDKIKWLDENQDADAP 142
D R + R + + L ++ AE+ +++A + + D
Sbjct: 20 DVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGD---DVD 76
Query: 143 EFQKKKKELEDVVQPIIAKLYQGA 166
++ K ++ Q A+ +
Sbjct: 77 AIEQAIKNVDKQTQDFAARRMDQS 100
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 32.8 bits (75), Expect = 0.005
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 113 QITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPI 158
++ +KT +E A+ L D + K +EL V Q +
Sbjct: 50 KLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKL 92
>d1xr5a_ e.8.1.4 (A:) Viral RNA polymerase {Human rhinovirus 14,
HRV-14 [TaxId: 12131]}
Length = 460
Score = 30.0 bits (67), Expect = 0.14
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 104 DQVAPFLFLQITDAEKTTMEEAID--DKIKWLDENQDADAPEFQ--KKKKELEDV-VQPI 158
D A L + T++EA+ D ++ +D A P KK+++ + Q
Sbjct: 79 DHYAGQLLSLDIPTSELTLKEALYGVDGLEPIDITTSAGFPYVSLGIKKRDILNKETQDT 138
Query: 159 IAKLYQGAGGAPPPPGGDAGKDEL 182
+ P KDEL
Sbjct: 139 EKMKFYLDKYGIDLPLVTYIKDEL 162
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin
{Human (Homo sapiens) [TaxId: 9606]}
Length = 459
Score = 28.7 bits (63), Expect = 0.36
Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 7/67 (10%)
Query: 46 IINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDV-----SLLTIDNDHRRRKDHHGGGD 100
++ + I +GLDK E F L D+ L K H G
Sbjct: 49 LLTKAEMDQILHGLDKVAEEWAQGTFKLNSNDEDIHTANERRLKELIGATAGKLHTGRS- 107
Query: 101 RRQDQVA 107
R DQV
Sbjct: 108 -RNDQVV 113
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga
maritima [TaxId: 2336]}
Length = 191
Score = 27.6 bits (60), Expect = 0.72
Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 13/90 (14%)
Query: 61 KKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHGGGDRRQDQVAPFLFLQITDAEKT 120
E ++ V+V +LG + G + P +
Sbjct: 2 TPEKDRGVVVVNLGYNFTGLIAYK-------------NGVPIKISYVPVGMKHVIKDVSA 48
Query: 121 TMEEAIDDKIKWLDENQDADAPEFQKKKKE 150
++ + ++ + + + +A + ++++ +
Sbjct: 49 VLDTSFEESERLIITHGNAVYNDLKEEEIQ 78
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 27.3 bits (59), Expect = 1.0
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 44 MRIINEPT-AAAIAYGLDKKEGEKNVLVFDLGGGTFDVS 81
+ + EPT A +A L+ L L GG D S
Sbjct: 271 TKQVVEPTGALPLAAVLEHGARLPQTLALLLSGGNRDFS 309
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella
typhimurium [TaxId: 90371]}
Length = 390
Score = 27.1 bits (59), Expect = 1.3
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 26 DAQRQATKDAGVIAGLTVMRIINEPT---AAAIAYGLDKKEGEKNVLVFDLGGGTFDVS 81
+A + + G+I L E + A A+ ++ E E+ ++V G G D+
Sbjct: 333 EAFKTLCRHEGIIPAL-------ESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIF 384
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 26.8 bits (57), Expect = 1.5
Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 9/77 (11%)
Query: 69 LVFDLGGGTFDVSLLTIDNDHRRRKDHHGGGDRRQDQVAPFLFLQITDAE-------KTT 121
++ R + G QD I +A K
Sbjct: 265 MLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQD--VEHRKPSIRNAHRCLDWEPKID 322
Query: 122 MEEAIDDKIKWLDENQD 138
M+E ID+ + + D
Sbjct: 323 MQETIDETLDFFLRTVD 339
>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH
{Chromobacterium violaceum [TaxId: 536]}
Length = 277
Score = 26.7 bits (59), Expect = 1.6
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 149 KELEDVVQPIIAKLYQGAGGAPPPPGGDA 177
K+L D P A LY A P GD
Sbjct: 242 KQLFDATAPDFAPLYLQLADAQPWGAGDI 270
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex
aeolicus [TaxId: 63363]}
Length = 180
Score = 25.9 bits (56), Expect = 2.6
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 65 EKNVLVFDLGGGTFDVSL 82
E V V D GGG+ +
Sbjct: 2 EGEVCVVDQGGGSTEYVF 19
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 26.1 bits (56), Expect = 2.7
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 15/114 (13%)
Query: 48 NEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHGGGDRRQDQVA 107
N+ + A + GE ++ D +V L ++ + + + DR
Sbjct: 229 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHD-- 286
Query: 108 PFLFLQITDAEK--------TTMEEAIDDKIKWLDENQDADAPEFQKKKKELED 153
+ + T E +++ I+W +NQD + K +KE +
Sbjct: 287 LRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD-----WWKAEKEAVE 335
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase)
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 25.4 bits (56), Expect = 2.7
Identities = 5/29 (17%), Positives = 16/29 (55%)
Query: 138 DADAPEFQKKKKELEDVVQPIIAKLYQGA 166
D D +F+ +K+++ ++ + + L+
Sbjct: 74 DFDRKQFEARKRKMMEIAKKVGKGLHPDC 102
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 26.1 bits (55), Expect = 3.3
Identities = 2/20 (10%), Positives = 8/20 (40%)
Query: 119 KTTMEEAIDDKIKWLDENQD 138
+ +D + + + +D
Sbjct: 350 HYLSDSLLDSLLNFAVQFKD 369
>d1o65a_ b.58.1.2 (A:) Hypothetical protein YiiM {Escherichia coli
[TaxId: 562]}
Length = 233
Score = 25.7 bits (56), Expect = 3.3
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 58 GLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHGGGDR 101
+ K + + +++ +LG ++ D + K HGG DR
Sbjct: 30 AIAKIQVDGELMLTELG----------LEGDEQAEKKVHGGPDR 63
>d2z8la1 b.40.2.2 (A:13-100) Superantigen-like protein SET3
{Staphylococcus aureus [TaxId: 1280]}
Length = 88
Score = 24.7 bits (54), Expect = 3.5
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 58 GLDKKEGEKNVLVFDLGGGTFDVSLLTIDNDHRRRKDHHG 97
G +G K+ L+FD + + D + + + + G
Sbjct: 21 GYRYSKGGKHYLIFDKHQKFTRIQIFGKDIERLKTRKNPG 60
>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 653
Score = 25.8 bits (56), Expect = 4.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 60 DKKEGEKNVLVFDLGGGTF 78
K++ LVF +GGG +
Sbjct: 589 PKRQSYNKSLVFVVGGGNY 607
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 25.8 bits (55), Expect = 4.1
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 119 KTTMEEAIDDKIKWLDENQD 138
+ +E++ D KW EN
Sbjct: 324 ELQVEDSCKDLWKWTTENPF 343
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 25.4 bits (54), Expect = 4.5
Identities = 3/20 (15%), Positives = 8/20 (40%)
Query: 119 KTTMEEAIDDKIKWLDENQD 138
++ +D +W +N
Sbjct: 323 ALGLDRMCEDLWRWQKQNPS 342
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 144
Score = 25.0 bits (54), Expect = 4.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 133 LDENQDADAPEFQKKKKELEDVVQPIIAKL 162
+D + + +F +EL +PII L
Sbjct: 1 MDHDTEVIVKDFNSILEELTFNSRPIITTL 30
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 25.4 bits (55), Expect = 4.6
Identities = 14/60 (23%), Positives = 20/60 (33%)
Query: 102 RQDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAK 161
Q P L + K E D K + Q K K++ED P++ K
Sbjct: 276 MQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLK 335
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 25.2 bits (54), Expect = 4.9
Identities = 3/20 (15%), Positives = 10/20 (50%)
Query: 119 KTTMEEAIDDKIKWLDENQD 138
+ + + + ++W EN+
Sbjct: 297 QVSFADGLARTVRWYRENRG 316
>d2nxpa1 d.379.1.1 (A:195-343) TAF5 subunit of TFIID {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 24.4 bits (53), Expect = 6.1
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 7/61 (11%)
Query: 103 QDQVAPFLFLQITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKL 162
Q V+ L + T EE +++ + D + EL + P+ +
Sbjct: 1 QPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLD-------CHRAELSQLFYPLFVHM 53
Query: 163 Y 163
Y
Sbjct: 54 Y 54
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 112
Score = 24.1 bits (52), Expect = 6.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 145 QKKKKELEDVVQPIIAKLYQGAGGAPPPPGGDAG 178
Q+ L V ++ +L G G P P G +G
Sbjct: 79 QESADRLAYEVSLLVFQLAGGIGERPQPSGPSSG 112
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 24.7 bits (53), Expect = 7.0
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 148 KKELEDVVQPIIAKLYQGAGGAPPPPGG 175
K+ +++ +I + QG GG P
Sbjct: 171 KRAVDEETAAVILEPVQGEGGVRPATPE 198
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 202
Score = 24.4 bits (53), Expect = 7.4
Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 70 VFDLGGGTFDVSLLTIDNDHRRRKDHHGG 98
+ DLG G+ D ++ ++ + + H G
Sbjct: 8 ILDLGAGSTDAAI--VNAEGQITAVHLAG 34
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase) {Escherichia
coli [TaxId: 562]}
Length = 315
Score = 24.8 bits (53), Expect = 7.9
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 119 KTTMEEAIDDKIKWLDENQ 137
+ ++E + +W ENQ
Sbjct: 297 EISLEAGLASTYQWFLENQ 315
>d1xb2b2 d.43.1.1 (B:112-222) Elongation factor Ts (EF-Ts),
dimerisation domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 111
Score = 23.8 bits (51), Expect = 8.1
Identities = 7/50 (14%), Positives = 21/50 (42%)
Query: 113 QITDAEKTTMEEAIDDKIKWLDENQDADAPEFQKKKKELEDVVQPIIAKL 162
+ ++ +L+ ++ ++ P +++ L+D + I KL
Sbjct: 46 GTLLHCQNLKDQLSTYSKGFLNSSELSELPAGPEREGSLKDQLALAIGKL 95
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.135 0.387
Gapped
Lambda K H
0.267 0.0461 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 694,098
Number of extensions: 31628
Number of successful extensions: 97
Number of sequences better than 10.0: 1
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 41
Length of query: 182
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 102
Effective length of database: 1,309,196
Effective search space: 133537992
Effective search space used: 133537992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.7 bits)