BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13569
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27671|RGRF1_MOUSE Ras-specific guanine nucleotide-releasing factor 1 OS=Mus
musculus GN=Rasgrf1 PE=1 SV=2
Length = 1262
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ +R+ND + L A+ D + GYL KR++D +WQT+WF L QN
Sbjct: 1 MQKAIRLNDGHVVTLGLLAQKDGTRKGYLSKRSADNPKWQTKWFALLQN 49
>sp|P28818|RGRF1_RAT Ras-specific guanine nucleotide-releasing factor 1 OS=Rattus
norvegicus GN=Rasgrf1 PE=1 SV=1
Length = 1244
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ +R+ND + +L A+ D + GYL KR+SD +WQT+WF L QN
Sbjct: 1 MQKAIRLNDGHVVSLGLLAQRDGTRKGYLSKRSSDNPKWQTKWFALLQN 49
>sp|Q13972|RGRF1_HUMAN Ras-specific guanine nucleotide-releasing factor 1 OS=Homo
sapiens GN=RASGRF1 PE=1 SV=1
Length = 1275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ +R+ND + L A+ D + GYL KR+SD +WQT+WF L QN
Sbjct: 1 MQKAIRLNDGHVAPLGLLARKDGTRKGYLSKRSSDNTKWQTKWFALLQN 49
>sp|O14827|RGRF2_HUMAN Ras-specific guanine nucleotide-releasing factor 2 OS=Homo
sapiens GN=RASGRF2 PE=1 SV=2
Length = 1237
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ VR N+ L+ A+ + + G+L K+T++ +RW +WF LYQN
Sbjct: 1 MQKSVRYNEGHALYLAFLARKEGTKRGFLSKKTAEASRWHEKWFALYQN 49
>sp|P70392|RGRF2_MOUSE Ras-specific guanine nucleotide-releasing factor 2 OS=Mus
musculus GN=Rasgrf2 PE=1 SV=2
Length = 1189
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ VR N+ L+ A+ + + G+L K+ ++ +RW +WF LYQN
Sbjct: 1 MQKSVRYNEGHALYLAMLARKEGTKRGFLSKKAAEASRWHEKWFALYQN 49
>sp|Q99JE4|RGRF2_RAT Ras-specific guanine nucleotide-releasing factor 2 OS=Rattus
norvegicus GN=Rasgrf2 PE=1 SV=1
Length = 1190
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ VR N+ L+ A+ + + G+L K+ ++ +RW +WF LYQN
Sbjct: 1 MQKSVRYNEGHALYLAFLARKEGTKRGFLSKKAAEASRWHEKWFALYQN 49
>sp|A2CEA7|RGRF2_DANRE Ras-specific guanine nucleotide-releasing factor 2 OS=Danio rerio
GN=rasgrf2 PE=3 SV=1
Length = 1244
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 49 LQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQN 97
+Q+ VR N+ LS A+ + + GYL K+T++ ++W ++F LYQN
Sbjct: 1 MQKSVRYNEGHALFLSVIARKEGTKRGYLSKKTTENSKWHEKFFALYQN 49
>sp|Q7Z5H3|RHG22_HUMAN Rho GTPase-activating protein 22 OS=Homo sapiens GN=ARHGAP22 PE=1
SV=1
Length = 698
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 44 MLSPKLQRVVRINDHQL-----TNLSDRAKYDHSL-----SGYLEKRTSDQARWQTRWFV 93
MLSPK+++ R L + R H L +G+L+K+ S WQ RWFV
Sbjct: 1 MLSPKIRQARRARSKSLVMGEQSRSPGRMPCPHRLGPVLKAGWLKKQRSIMKNWQQRWFV 60
Query: 94 LYQNKVIAY 102
L +++ Y
Sbjct: 61 LRGDQLFYY 69
>sp|Q80TI1|PKHH1_MOUSE Pleckstrin homology domain-containing family H member 1 OS=Mus
musculus GN=Plekhh1 PE=2 SV=2
Length = 1356
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 57 DHQLTNLSDRAKYDHSL--SGYLEKRTSDQARWQTRWFVLYQNKVIAY 102
+H+L S + +L SGYL K S W+ RWFVL Q +++ Y
Sbjct: 557 EHKLQRTSSYSTDGEALEKSGYLLKMGSRVKTWKRRWFVLRQGQILYY 604
>sp|Q9ULM0|PKHH1_HUMAN Pleckstrin homology domain-containing family H member 1 OS=Homo
sapiens GN=PLEKHH1 PE=2 SV=2
Length = 1364
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 74 SGYLEKRTSDQARWQTRWFVLYQNKVIAY 102
SGYL K S W+ RWFVL Q +++ Y
Sbjct: 582 SGYLLKMGSQVKTWKRRWFVLRQGQIMYY 610
>sp|Q8BL80|RHG22_MOUSE Rho GTPase-activating protein 22 OS=Mus musculus GN=Arhgap22 PE=1
SV=2
Length = 702
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 74 SGYLEKRTSDQARWQTRWFVLYQNKVIAY 102
+G+L K+ S WQ RWFVL +++ Y
Sbjct: 47 AGWLRKQRSIMKNWQQRWFVLRGDQLFYY 75
>sp|Q6ZV73|FGD6_HUMAN FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapiens
GN=FGD6 PE=1 SV=2
Length = 1430
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 70 DHSLSGYLEKRTSDQARWQTRWFVLYQNKVI 100
D S+SGYL + ++ W+ WFV+ +NKV+
Sbjct: 1333 DSSMSGYLYRSKGNKKPWKHFWFVI-KNKVL 1362
>sp|Q9NYT0|PLEK2_HUMAN Pleckstrin-2 OS=Homo sapiens GN=PLEK2 PE=1 SV=1
Length = 353
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 75 GYLEKRTSDQARWQTRWFVLYQNKVIAYCWSKG 107
G+L KR W+ RWF+L QN ++ Y G
Sbjct: 9 GFLVKRGHIVHNWKARWFILRQNTLVYYKLEGG 41
>sp|Q00IB7|PKHH1_DANRE Pleckstrin homology domain-containing family H member 1 OS=Danio
rerio GN=plekhh1 PE=2 SV=1
Length = 1433
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 74 SGYLEKRTSDQARWQTRWFVLYQNKVIAY 102
+GYL K S W+ RWF+L +++ Y
Sbjct: 647 TGYLLKMGSQVKAWKRRWFILRNGEILYY 675
>sp|Q9NGQ2|KIF1_DICDI Kinesin-related protein 1 OS=Dictyostelium discoideum GN=kif1 PE=1
SV=1
Length = 2205
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 74 SGYLEKRTSDQARWQTRWFVL 94
SGYL+K+++ + W+ RWFV
Sbjct: 1527 SGYLKKKSAFKEEWKPRWFVF 1547
>sp|Q9YFP5|KPTA_AERPE Probable RNA 2'-phosphotransferase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=kptA PE=1 SV=2
Length = 220
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 33 YIASWHVIGIVMLSPKLQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQA 85
++ WH++G+ + PK ++L N RA+Y HS+ +E +
Sbjct: 80 WVEEWHIVGVALHDPK-------GRYELRNGEIRARYGHSIPVNVEPLPGEPP 125
>sp|Q9WV52|PLEK2_MOUSE Pleckstrin-2 OS=Mus musculus GN=Plek2 PE=1 SV=1
Length = 353
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 75 GYLEKRTSDQARWQTRWFVLYQNKVIAYCWSKG 107
G+L KR W+ RWF+L QN ++ Y G
Sbjct: 9 GFLVKRGHIVHNWKARWFILRQNTLLYYKLEGG 41
>sp|Q96M34|CC030_HUMAN Uncharacterized protein C3orf30 OS=Homo sapiens GN=C3orf30 PE=2
SV=2
Length = 536
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 47 PKLQRVVRINDHQLTNLSDR---AKYDHSLSGYLEKRTSDQ 84
P QR R DH++ S+R + D +SG E+RTS+Q
Sbjct: 169 PSDQRGSRQTDHRMAGQSERRASEQMDRRMSGEAERRTSEQ 209
>sp|A5UBK4|MOAA_HAEIE Cyclic pyranopterin monophosphate synthase OS=Haemophilus
influenzae (strain PittEE) GN=moaA PE=3 SV=1
Length = 337
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 13 ARKSGIRQLRNSTNFEEIKRYIASWHVIGIVMLSPKLQRVVRINDHQLTNLSDRAKYDHS 72
A GIRQL +TN + + +A W +GI ++ + + HQ+T ++ K+D
Sbjct: 96 ANIEGIRQLAVTTNGYRMAKDVADWKKVGITSINVSVDSLDPKMFHQITGIN---KFDDV 152
Query: 73 LSG 75
+ G
Sbjct: 153 MRG 155
>sp|Q27421|OSP_DROME Protein outspread OS=Drosophila melanogaster GN=osp PE=2 SV=5
Length = 1566
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 56 NDHQLTNLSDRAKYDHSLSGYL--------EKRTSDQARWQTRWFVLYQNKVIAY 102
N +NL++ A S GYL RWQ RWFVLY + + Y
Sbjct: 70 NRRTSSNLAEPASRKVSKCGYLFVAPDWDFSNPLYRTKRWQRRWFVLYDDGELTY 124
>sp|Q56691|FRP_VIBHA NADPH-flavin oxidoreductase OS=Vibrio harveyi GN=frp PE=1 SV=1
Length = 240
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 45 LSPKLQR--VVRINDHQLTNLSDRAKYDHSLSGYLEKRTSDQ 84
+ P+L VV N +Q NL D YD ++ Y RTS+Q
Sbjct: 166 VKPRLPAHVVVHENQYQELNLDDIQSYDQTMQAYYASRTSNQ 207
>sp|Q9UN19|DAPP1_HUMAN Dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide OS=Homo sapiens GN=DAPP1 PE=1 SV=1
Length = 280
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 47 PKLQRVVRINDHQLT-----NLSDRAKYDHSLSGYLEKRTSDQARWQTRWFVLYQNKV 99
P + VR++ T +L A + GYL K+ W+TRWF L++N++
Sbjct: 136 PSIYESVRVHTAMQTGRTEDDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLHRNEL 193
>sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapiens GN=SWAP70 PE=1 SV=1
Length = 585
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 26 NFEEIKRYIASWHVIGIV---MLSPKLQRVVRINDHQLTNLSDRAKYDHSLSGYLEKRTS 82
NF++ K +++W +I ++ S + R + + + + D GY+ K+
Sbjct: 165 NFDDSKNGLSAWELIELIGNGQFSKGMDR--QTVSMAINEVFNELILDVLKQGYMMKKGH 222
Query: 83 DQARWQTRWFVLYQNKVIAY 102
+ W RWFVL N +I+Y
Sbjct: 223 RRKNWTERWFVLKPN-IISY 241
>sp|Q6DII7|SKAP1_XENTR Src kinase-associated phosphoprotein 1 OS=Xenopus tropicalis
GN=skap1 PE=2 SV=1
Length = 345
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 75 GYLEKRTSDQ----ARWQTRWFVLYQNKVIAYCWSKG 107
GYLE+R D + WQ RW VL + Y KG
Sbjct: 114 GYLERRKKDHGFFGSEWQKRWCVLTTRAFLYYSSEKG 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.133 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,339,735
Number of Sequences: 539616
Number of extensions: 1472485
Number of successful extensions: 4112
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4083
Number of HSP's gapped (non-prelim): 45
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)