Query psy13577
Match_columns 75
No_of_seqs 109 out of 1119
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 22:46:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 99.6 2E-15 6.8E-20 115.6 6.7 63 8-74 344-406 (675)
2 4b9q_A Chaperone protein DNAK; 99.5 6.3E-15 2.2E-19 111.2 6.6 60 9-74 344-403 (605)
3 2kho_A Heat shock protein 70; 99.5 2.4E-14 8.1E-19 108.1 4.8 61 8-74 343-403 (605)
4 1yuw_A Heat shock cognate 71 k 99.5 3.3E-14 1.1E-18 106.3 5.4 63 9-74 341-405 (554)
5 2v7y_A Chaperone protein DNAK; 99.4 1.3E-13 4.4E-18 101.9 4.8 60 9-74 313-372 (509)
6 3i33_A Heat shock-related 70 k 98.7 9.5E-09 3.3E-13 72.7 4.3 42 9-53 362-403 (404)
7 3qfu_A 78 kDa glucose-regulate 98.7 1.9E-08 6.4E-13 70.7 4.3 42 8-52 353-394 (394)
8 4gni_A Putative heat shock pro 98.5 6.3E-08 2.1E-12 68.8 3.3 43 9-54 355-404 (409)
9 1dkg_D Molecular chaperone DNA 98.4 1.3E-07 4.3E-12 66.5 3.8 40 9-52 344-383 (383)
10 4ehu_A Activator of 2-hydroxyi 98.1 1.8E-06 6.1E-11 58.5 2.9 42 7-52 215-256 (276)
11 1jce_A ROD shape-determining p 97.8 7.9E-06 2.7E-10 56.6 2.1 41 9-53 288-328 (344)
12 3h1q_A Ethanolamine utilizatio 97.4 5.7E-05 2E-09 50.5 2.4 37 8-48 236-272 (272)
13 2zgy_A Plasmid segregation pro 94.4 0.022 7.4E-07 39.1 2.5 32 14-48 286-319 (320)
14 1q5l_A Chaperone protein DNAK; 94.1 0.013 4.5E-07 36.6 0.7 18 57-74 14-31 (135)
15 3n8e_A Stress-70 protein, mito 92.9 0.028 9.4E-07 36.9 0.8 17 58-74 18-34 (182)
16 1hux_A Activator of (R)-2-hydr 90.4 0.18 6.2E-06 34.1 2.8 40 8-51 218-257 (270)
17 2fxu_A Alpha-actin-1, actin, a 89.6 0.17 5.7E-06 35.5 2.1 43 8-50 303-349 (375)
18 2ews_A Pantothenate kinase; PA 86.6 0.28 9.4E-06 34.2 1.7 45 3-48 242-286 (287)
19 2fsj_A Hypothetical protein TA 85.4 0.2 7E-06 34.9 0.5 33 14-49 310-343 (346)
20 2ych_A Competence protein PILM 84.3 0.42 1.4E-05 33.0 1.7 29 8-41 316-344 (377)
21 3hz6_A Xylulokinase; xylulose, 79.4 1.7 5.8E-05 31.8 3.5 42 9-54 413-454 (511)
22 3jvp_A Ribulokinase; PSI-II, N 78.6 1.6 5.4E-05 32.4 3.2 39 10-53 452-490 (572)
23 3l0q_A Xylulose kinase; xlylul 78.1 1.7 5.7E-05 32.1 3.1 40 10-54 454-493 (554)
24 4e1j_A Glycerol kinase; struct 77.9 1.8 6.2E-05 31.8 3.3 40 10-54 437-476 (520)
25 3i8b_A Xylulose kinase; strain 77.4 1.6 5.4E-05 32.1 2.8 40 10-54 436-475 (515)
26 3ezw_A Glycerol kinase; glycer 77.2 1.8 6.1E-05 31.8 3.1 40 10-54 414-453 (526)
27 4bc3_A Xylulose kinase; transf 76.8 2.1 7E-05 31.6 3.3 39 10-53 446-484 (538)
28 2itm_A Xylulose kinase, xylulo 75.8 1.9 6.4E-05 31.2 2.8 41 10-54 398-438 (484)
29 3ll3_A Gluconate kinase; xylul 75.7 2.4 8.3E-05 30.9 3.4 40 10-54 405-444 (504)
30 2zf5_O Glycerol kinase; hypert 75.2 2 6.7E-05 31.2 2.8 40 10-54 405-444 (497)
31 3g25_A Glycerol kinase; IDP007 74.5 2.3 8E-05 30.9 3.1 40 10-54 416-455 (501)
32 2d4w_A Glycerol kinase; alpha 74.4 2.1 7.2E-05 31.2 2.8 40 10-54 415-454 (504)
33 3h3n_X Glycerol kinase; ATP-bi 74.1 2.8 9.7E-05 30.5 3.4 40 10-54 415-454 (506)
34 2dpn_A Glycerol kinase; thermu 72.9 2.4 8.3E-05 30.7 2.8 39 10-53 410-448 (495)
35 2w40_A Glycerol kinase, putati 72.0 2.6 8.9E-05 30.6 2.8 40 10-54 419-458 (503)
36 2p3r_A Glycerol kinase; glycer 71.0 2.4 8.2E-05 31.0 2.4 40 10-54 413-452 (510)
37 4apw_A ALP12; actin-like prote 70.2 4.1 0.00014 28.1 3.4 34 14-51 292-325 (329)
38 3ifr_A Carbohydrate kinase, FG 67.3 3 0.0001 30.5 2.3 40 10-54 412-451 (508)
39 3js6_A Uncharacterized PARM pr 65.2 1.8 6.1E-05 30.4 0.7 32 14-53 308-339 (355)
40 3h6e_A Carbohydrate kinase, FG 64.2 3 0.0001 30.6 1.7 38 9-51 398-436 (482)
41 1k8k_A ARP3, actin-like protei 63.6 2.9 9.9E-05 29.3 1.5 43 8-50 325-387 (418)
42 4a2a_A Cell division protein F 62.0 2.7 9.1E-05 30.2 1.1 39 9-51 339-394 (419)
43 2i7n_A Pantothenate kinase 1; 50.3 8.1 0.00028 27.7 2.0 45 4-48 312-358 (360)
44 2uyt_A Rhamnulokinase; rhamnos 45.6 14 0.00047 26.5 2.6 33 10-48 405-437 (489)
45 3vov_A Glucokinase, hexokinase 39.2 25 0.00086 23.5 3.0 17 32-48 277-293 (302)
46 1k8k_B ARP2, actin-like protei 29.7 12 0.00042 26.1 0.2 43 8-50 307-364 (394)
47 4g9i_A Hydrogenase maturation 26.9 72 0.0025 25.0 4.1 41 13-54 720-764 (772)
48 2e2o_A Hexokinase; acetate and 24.4 34 0.0012 22.5 1.7 34 12-49 253-286 (299)
49 2fcg_F Cationic, antibacterial 23.4 32 0.0011 15.7 1.0 14 11-24 5-18 (26)
50 2gup_A ROK family protein; sug 22.1 77 0.0026 20.6 3.1 16 34-49 271-286 (292)
51 3f9m_A Glucokinase; hexokinase 21.2 27 0.00091 25.9 0.6 44 10-53 420-463 (470)
52 3hm8_A Hexokinase-3; glucose, 20.5 23 0.00079 26.1 0.2 42 11-52 397-438 (445)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.58 E-value=2e-15 Score=115.60 Aligned_cols=63 Identities=22% Similarity=0.190 Sum_probs=59.3
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCCCCCCceEEEeeeeccceEEe
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~~~v~~~~l~Dv~p~sLGie~ 74 (75)
..|||.||+.|+++|+ +++..++|||||||+|||+||+++++.++++++.+.|++|+|||+++
T Consensus 344 ssriP~v~~~l~~~fg----~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~slgi~~ 406 (675)
T 3d2f_A 344 TTRIPTLKQSISEAFG----KPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSW 406 (675)
T ss_dssp GGGSHHHHHHHHHHHT----SCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSCEEEEE
T ss_pred CccChHHHHHHHHhcC----CCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecceEeee
Confidence 3699999999999996 68889999999999999999999999888999999999999999986
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.55 E-value=6.3e-15 Score=111.23 Aligned_cols=60 Identities=45% Similarity=0.675 Sum_probs=56.5
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCCCCCCceEEEeeeeccceEEe
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~~~v~~~~l~Dv~p~sLGie~ 74 (75)
.|||.||+.++++|+ +++..++|||||||+|||+||+++++. ++++.+.|++|+|||+++
T Consensus 344 sriP~v~~~l~~~fg----~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l~dv~p~slgie~ 403 (605)
T 4b9q_A 344 TRMPMVQKKVAEFFG----KEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGIET 403 (605)
T ss_dssp GGSHHHHHHHHHHHT----SCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEEECBCSSCEEEEE
T ss_pred cCchHHHHHHHHHhc----cCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEEEeeeeeEEEEEE
Confidence 699999999999996 688999999999999999999999987 579999999999999986
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.48 E-value=2.4e-14 Score=108.10 Aligned_cols=61 Identities=44% Similarity=0.656 Sum_probs=56.4
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCCCCCCceEEEeeeeccceEEe
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~~~v~~~~l~Dv~p~sLGie~ 74 (75)
..|||.||+.++++|+ +++..++|||||||+|||+||+++++. ++++.+.|++|+|||+++
T Consensus 343 ~srip~v~~~l~~~fg----~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~dv~p~slgi~~ 403 (605)
T 2kho_A 343 QTRMPMVQKKVAEFFG----KEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGIET 403 (605)
T ss_dssp GGGSHHHHHHHHHHHS----SCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCSBCCCCCEEEEE
T ss_pred cccChHHHHHHHHhcC----CCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEEeeeeeeccccc
Confidence 3699999999999996 688899999999999999999999986 678999999999999986
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.47 E-value=3.3e-14 Score=106.31 Aligned_cols=63 Identities=43% Similarity=0.698 Sum_probs=57.8
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC--CCCCceEEEeeeeccceEEe
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE--QDTDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~--~~v~~~~l~Dv~p~sLGie~ 74 (75)
.|+|.||+.|+++|++ +++..++|||||||+|||+||+.+++. ++++++.+.|++|+|||+++
T Consensus 341 srip~v~~~l~~~f~~---~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~ 405 (554)
T 1yuw_A 341 TRIPKIQKLLQDFFNG---KELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405 (554)
T ss_dssp GGCHHHHHHHHHHTTT---CCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEE
T ss_pred ccChHHHHHHHHHcCC---CccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEe
Confidence 6999999999999975 688899999999999999999999884 45789999999999999986
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.41 E-value=1.3e-13 Score=101.89 Aligned_cols=60 Identities=47% Similarity=0.748 Sum_probs=55.7
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCCCCCCceEEEeeeeccceEEe
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGEQDTDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~~~v~~~~l~Dv~p~sLGie~ 74 (75)
.|+|.+++.|+++|+ +++....|||||||+|||+||+.+++. ++++.+.|++|+|||+++
T Consensus 313 s~~p~v~~~l~~~f~----~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~slgi~~ 372 (509)
T 2v7y_A 313 TRIPAVQEAIKRELG----KEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPLSLGIET 372 (509)
T ss_dssp GGCHHHHHHHHHHHS----SCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSSEEEEEE
T ss_pred ccChHHHHHHHHHhC----CCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeeccccceee
Confidence 699999999999996 678889999999999999999999886 578999999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=98.72 E-value=9.5e-09 Score=72.74 Aligned_cols=42 Identities=48% Similarity=0.675 Sum_probs=38.2
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
.|+|.+++.|+++|++ .++....|||+|||+|||++|+++++
T Consensus 362 s~~p~l~~~l~~~~~~---~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 362 TRIPKIQKLLQDFFNG---KELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp GGCHHHHHHHHHHTTT---CCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred cccHHHHHHHHHHcCC---CCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 5899999999999965 78888999999999999999999986
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=98.66 E-value=1.9e-08 Score=70.66 Aligned_cols=42 Identities=52% Similarity=0.741 Sum_probs=38.0
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhc
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLS 52 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails 52 (75)
..|+|.+++.|+++|++ .++....|||++||+|||++|++++
T Consensus 353 ~s~~p~l~~~l~~~~~~---~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 353 STRIPKVQQLLESYFDG---KKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp GGGSHHHHHHHHHHTTT---CCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHcCC---CCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 35899999999999964 7888899999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.49 E-value=6.3e-08 Score=68.85 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=36.4
Q ss_pred eeeHHHHHHHHHHhcCccCC-CC------CcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 9 VTLVVAVAIAKEEKNGVFYK-EP------SRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~-~~------~~~inpDEaVA~GAAi~Aails~~ 54 (75)
.|+|.|+++++++|+. . .+ ...+|||||||+|||++|+.....
T Consensus 355 s~~p~v~~~l~~~f~~---~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 355 SNTPRIAANFRYIFPE---STRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp GGCHHHHHHHHHHSCT---TSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred cccHHHHHHHHHHcCC---ccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 5999999999999974 3 12 678999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=98.44 E-value=1.3e-07 Score=66.53 Aligned_cols=40 Identities=50% Similarity=0.635 Sum_probs=36.7
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhc
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLS 52 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails 52 (75)
.|+|.+++.++++|+ .++....|||++||+|||++|++|+
T Consensus 344 s~~p~l~~~l~~~~~----~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 344 TRMPMVQKKVAEFFG----KEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp GGSHHHHHHHHHHHS----SCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred cccHHHHHHHHHHhC----CCCCCCcChHHHHHHHHHHHHHhhC
Confidence 699999999999996 5788899999999999999999875
No 10
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.07 E-value=1.8e-06 Score=58.50 Aligned_cols=42 Identities=26% Similarity=-0.028 Sum_probs=37.3
Q ss_pred eeeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhc
Q psy13577 7 FVVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLS 52 (75)
Q Consensus 7 ~~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails 52 (75)
-+.|.|.+++.++++|+ +++..+.||++++|+|||++|.-..
T Consensus 215 Gva~n~~lr~~l~~~~g----~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 215 GVARNSGIVRAMAREIN----TEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp GGGGCHHHHHHHHHHHT----SCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHC----CCeeeCCCcchHHHHHHHHHHHHHH
Confidence 47899999999999996 6888899999999999999997543
No 11
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=97.78 E-value=7.9e-06 Score=56.65 Aligned_cols=41 Identities=22% Similarity=0.120 Sum_probs=36.2
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
.|+|.+++.|++.|+ .++....||+++||+||+++|..++.
T Consensus 288 s~~p~l~~~l~~~~~----~~v~~~~~p~~ava~Gaa~~a~~~~~ 328 (344)
T 1jce_A 288 SLLRGLDTLLQKETG----ISVIRSEEPLTAVAKGAGMVLDKVNI 328 (344)
T ss_dssp GCSBTHHHHHHHHHS----SCEEECSSTTTHHHHHHHHGGGCHHH
T ss_pred ccchHHHHHHHHHHC----CCccccCChHHHHHHHHHHHHhChHH
Confidence 599999999999996 56777889999999999999987653
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.44 E-value=5.7e-05 Score=50.53 Aligned_cols=37 Identities=16% Similarity=0.007 Sum_probs=32.8
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHh
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~A 48 (75)
..|+|.+++.+++.|+ .++....||++++|+|||++|
T Consensus 236 ~a~~~~l~~~l~~~l~----~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 236 TAYLTGFSEEFSRFLG----KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp GGGSTTHHHHHHHHHS----SCCBCCSSGGGHHHHHHHTTC
T ss_pred ccchhhHHHHHHHHhC----CCccccCChHHHHHHHHHhcC
Confidence 3589999999999996 677788999999999999875
No 13
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=94.42 E-value=0.022 Score=39.15 Aligned_cols=32 Identities=9% Similarity=0.022 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCccCC--CCCcCCCcchhhhhhhhHHh
Q psy13577 14 AVAIAKEEKNGVFYK--EPSRGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 14 Vq~~l~~~f~~~~~~--~~~~~inpDEaVA~GAAi~A 48 (75)
+++.+++.|+. . .+....||++|+|+||++++
T Consensus 286 l~~~l~~~~~~---~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 286 ICDAVKKHTQI---RDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHTSCC---CGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhCC---CCCceeeCCCcHHHHHHHHHHhc
Confidence 88999999863 2 46678899999999999875
No 14
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=94.06 E-value=0.013 Score=36.57 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=10.5
Q ss_pred CCceEEEeeeeccceEEe
Q psy13577 57 TDAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 57 v~~~~l~Dv~p~sLGie~ 74 (75)
++++.+.|++|+|||+++
T Consensus 14 ~~d~~l~Dv~p~slGIe~ 31 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIET 31 (135)
T ss_dssp -------CCCSSCCCEEE
T ss_pred eCcEEEEEeecCcEEEEE
Confidence 478999999999999986
No 15
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=92.91 E-value=0.028 Score=36.93 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=10.5
Q ss_pred CceEEEeeeeccceEEe
Q psy13577 58 DAIVLLDVNPLIPAVDA 74 (75)
Q Consensus 58 ~~~~l~Dv~p~sLGie~ 74 (75)
.++.+.||+|+||||++
T Consensus 18 ~~f~l~DV~P~slGie~ 34 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIET 34 (182)
T ss_dssp ------CBCSSCEEEEC
T ss_pred CCEEEEEecCCEEEEEE
Confidence 57889999999999986
No 16
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=90.41 E-value=0.18 Score=34.15 Aligned_cols=40 Identities=20% Similarity=-0.054 Sum_probs=32.6
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhh
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVL 51 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aail 51 (75)
+.+-|.+++++++.++ .++...-+|+.+.|+|||+.|...
T Consensus 218 ~a~n~~~~~~~~~~lg----~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 218 VAQNYGVRGALEEGLG----VEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp GGGCHHHHHHHHHHHC----SCEECCGGGGGHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHC----CCeEeCCCcchHhHHHHHHHHHHh
Confidence 5678999999999996 566666667778999999998754
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=89.59 E-value=0.17 Score=35.45 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=31.9
Q ss_pred eeeeHHHHHHHHHHhcCccC----CCCCcCCCcchhhhhhhhHHhhh
Q psy13577 8 VVTLVVAVAIAKEEKNGVFY----KEPSRGVNPDEAVAYGAAVQAGV 50 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~----~~~~~~inpDEaVA~GAAi~Aai 50 (75)
..++|.++++|++.++.... .+.....||+.++++|++++|..
T Consensus 303 ~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp GGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred CCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 46899999999998863211 11224568999999999999983
No 18
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=86.62 E-value=0.28 Score=34.21 Aligned_cols=45 Identities=13% Similarity=-0.057 Sum_probs=34.9
Q ss_pred cccceeeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHh
Q psy13577 3 LLGAFVVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 3 ~~~~~~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~A 48 (75)
+.|-|+-+.|.+++.++++++. .+.++...-||.-+.|+|||+.+
T Consensus 242 f~Gg~l~~n~~l~~~l~~~~~~-~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 242 YIGSSFHNNALLRKVVEDYTVL-RGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp EESGGGTTCHHHHHHHHHHHHH-TTCEEEECTTGGGHHHHHHHHTC
T ss_pred EeCCchhcCHHHHHHHHHHHhh-CCceEEECCCccHHHHHHHHHhC
Confidence 3577788899999999998631 12556667789999999999864
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=85.44 E-value=0.2 Score=34.92 Aligned_cols=33 Identities=18% Similarity=-0.068 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCccCCCC-CcCCCcchhhhhhhhHHhh
Q psy13577 14 AVAIAKEEKNGVFYKEP-SRGVNPDEAVAYGAAVQAG 49 (75)
Q Consensus 14 Vq~~l~~~f~~~~~~~~-~~~inpDEaVA~GAAi~Aa 49 (75)
+++.+++.|+. ... ....||++|+|+|+...+.
T Consensus 310 l~~~l~~~~~~---~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 310 IGDRFEEIAPG---TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HGGGGGGGSTT---CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHCcC---cEEeccCCCcHHHHHHHHHHHHh
Confidence 77788888853 222 2356999999999987653
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=84.26 E-value=0.42 Score=32.99 Aligned_cols=29 Identities=28% Similarity=0.171 Sum_probs=21.0
Q ss_pred eeeeHHHHHHHHHHhcCccCCCCCcCCCcchhhh
Q psy13577 8 VVTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVA 41 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA 41 (75)
..|+|.+++.+++.|+ .+... .||+++|+
T Consensus 316 ~s~~p~l~~~l~~~l~----~~v~~-~~P~~~v~ 344 (377)
T 2ych_A 316 GSKLRGLASLLTDTLG----VNLEP-VNPWEAVA 344 (377)
T ss_dssp GGGSTTHHHHHHHHHT----SEEEE-CCGGGGSB
T ss_pred cccchhHHHHHHHHhC----CCeEe-cCchhhcc
Confidence 3589999999999996 34333 37776654
No 21
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=79.40 E-value=1.7 Score=31.83 Aligned_cols=42 Identities=12% Similarity=-0.104 Sum_probs=32.7
Q ss_pred eeeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
.|=|...+++.+.|+ .++.....+.|+.|+|||+.|+.-.+.
T Consensus 413 a~s~~~~Qi~ADv~g----~pV~~~~~~~e~~alGaA~lA~~a~G~ 454 (511)
T 3hz6_A 413 ARSEAWLRMIADNLN----VSLLVKPDAHLHPLRGLAALAAVELEW 454 (511)
T ss_dssp GGCHHHHHHHHHHHT----CEEEECCCGGGHHHHHHHHHHHHHTTS
T ss_pred hcCHHHHHHHHHHHC----CeeEEecCCCCchHHHHHHHHHHHhCC
Confidence 467899999999996 454134468999999999999876554
No 22
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=78.56 E-value=1.6 Score=32.42 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=31.1
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+
T Consensus 452 ks~~~~Qi~ADv~g----~pV~-~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 452 KNHLLMQIFADVTN----REIK-VAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp HCHHHHHHHHHHHT----SCEE-EBCCSSHHHHHHHHHHHHHHC
T ss_pred hCHHHHHHHHHHHC----CeeE-ecCCCccHHHHHHHHHHHhcC
Confidence 56888999999996 4553 345789999999999987665
No 23
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=78.11 E-value=1.7 Score=32.14 Aligned_cols=40 Identities=18% Similarity=0.093 Sum_probs=31.7
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++.. ....|+.|+|||+.|+.-.+.
T Consensus 454 ks~~~~Qi~ADv~g----~pV~~-~~~~e~~alGAA~lA~~a~G~ 493 (554)
T 3l0q_A 454 KNPIFVQEHANATG----CAMLL-PEESEAMLLGSAMMGTVAAGV 493 (554)
T ss_dssp GCHHHHHHHHHHHC----CEEEE-ESCSCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHhhC----CeEEe-cCCCcchHHHHHHHHHHHcCC
Confidence 66889999999996 45533 356789999999999876654
No 24
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=77.95 E-value=1.8 Score=31.80 Aligned_cols=40 Identities=18% Similarity=0.009 Sum_probs=31.9
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 437 ks~~~~Qi~ADvlg----~pV~-~~~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 437 ASDWTMQRLSDLLD----APVD-RPVILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp GCHHHHHHHHHHHT----SCEE-EESCCCHHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHhC----CeEE-ecCCCccHHHHHHHHHHHHcCC
Confidence 66899999999996 5654 3456889999999999876654
No 25
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=77.39 E-value=1.6 Score=32.14 Aligned_cols=40 Identities=25% Similarity=0.130 Sum_probs=31.4
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 436 ks~~~~Qi~ADvlg----~pV~-~~~~~e~~alGAA~lA~~a~G~ 475 (515)
T 3i8b_A 436 KSEAIRTLAPSILG----MDVT-RPATDEYVAIGAARQAAWVLSG 475 (515)
T ss_dssp GCHHHHHHHHHHHT----SCEE-EECCCCHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHhC----CceE-ecCCcccHHHHHHHHHHHHcCC
Confidence 67899999999996 5553 3456789999999999875543
No 26
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.18 E-value=1.8 Score=31.75 Aligned_cols=40 Identities=20% Similarity=0.135 Sum_probs=31.6
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. .....|+.|+|||+.|+.-.+.
T Consensus 414 ks~~~~Qi~ADvlg----~pV~-~~~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 414 ANNFLMQFQSDILG----TRVE-RPEVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp GCHHHHHHHHHHHT----SEEE-EESCCCHHHHHHHHHHHHHTTS
T ss_pred hCHHHHHHHHHHHC----CEEE-eCCCCchHHHHHHHHHHHHhCC
Confidence 55889999999996 5554 3456789999999999877664
No 27
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=76.79 E-value=2.1 Score=31.58 Aligned_cols=39 Identities=8% Similarity=-0.055 Sum_probs=30.6
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+
T Consensus 446 ~s~~~~Qi~ADv~g----~pV~-~~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 446 HNREILQVLADVFD----APVY-VIDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp GCHHHHHHHHHHHT----SCEE-ECCCTTHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhC----CceE-ecCCCCchHHHHHHHHHHHhC
Confidence 66899999999996 4553 345789999999999886443
No 28
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=75.81 E-value=1.9 Score=31.17 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=29.9
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.++ .++...-+++.+.|+|||+.|+.-.+.
T Consensus 398 ~s~~~~Qi~Adv~g----~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 398 RSEYWRQMLADISG----QQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCHHHHHHHHHHHC----CCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHhC----CeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 66889999999996 566543333335899999999876553
No 29
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=75.68 E-value=2.4 Score=30.94 Aligned_cols=40 Identities=10% Similarity=-0.065 Sum_probs=31.6
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 405 ~s~~~~Qi~ADv~g----~pV~-~~~~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 405 KSDFVRQLCANIFN----VPIV-TMKEQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp CSHHHHHHHHHHHT----SCEE-EESCSCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHhhC----CeEE-ecCCCCchhHHHHHHHHHHcCc
Confidence 67899999999996 5553 3457789999999999876554
No 30
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=75.15 E-value=2 Score=31.22 Aligned_cols=40 Identities=23% Similarity=0.153 Sum_probs=30.9
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.++ .++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 405 ~s~~~~Qi~Adv~g----~pV~~-~~~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 405 ANDFLMQFQADILN----RKVIR-PVVKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp GCHHHHHHHHHHHT----SCEEE-ESCSCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHhhcC----CeEEE-cCCCcchHHHHHHHHHHHhCc
Confidence 56889999999996 55543 345679999999999876553
No 31
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=74.53 E-value=2.3 Score=30.89 Aligned_cols=40 Identities=23% Similarity=0.177 Sum_probs=31.7
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 416 ks~~~~Qi~Adv~g----~pV~-~~~~~e~~alGaA~la~~a~G~ 455 (501)
T 3g25_A 416 KNNFIMQFQADIVN----TSVE-RPEIQETTALGAAFLAGLAVGF 455 (501)
T ss_dssp GCHHHHHHHHHHHT----SEEE-EESCCCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHhC----CceE-ecCCCcchHHHHHHHHHHHhCc
Confidence 66899999999996 4543 3457889999999999876654
No 32
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=74.44 E-value=2.1 Score=31.18 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=31.3
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.++ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 415 ~s~~~~Qi~Adv~g----~pV~-~~~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 415 ANELLMQFQADQLG----VDVV-RPKVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp GCHHHHHHHHHHHT----SCEE-EESCSCHHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHhC----CeEE-eCCCCcchHHHHHHHHHhhcCc
Confidence 56889999999996 5554 3456789999999999876654
No 33
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=74.11 E-value=2.8 Score=30.54 Aligned_cols=40 Identities=20% Similarity=0.137 Sum_probs=31.5
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 415 ~s~~~~Qi~ADv~g----~pV~-~~~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 415 KNDLLMQFQADILD----IDVQ-RAANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp GCHHHHHHHHHHHT----SEEE-ECSSSCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHhC----CeEE-ecCCCcchhHHHHHHHHHHhCc
Confidence 66889999999996 4543 3457899999999999876554
No 34
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=72.85 E-value=2.4 Score=30.72 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=30.5
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
|=|...+++.+.++ .++.. ..+.|+.|+|||+.|+.-.+
T Consensus 410 ~n~~~~q~~Adv~g----~pV~~-~~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 410 QNRLFLKIQADLLG----VPVAV-PEVTETTALGAALMAGVGAG 448 (495)
T ss_dssp GCHHHHHHHHHHHT----SCEEE-ESCSCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHhC----CeeEe-cCCcccHHHHHHHHHHhhcC
Confidence 56889999999996 56543 45678999999999987554
No 35
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=72.02 E-value=2.6 Score=30.62 Aligned_cols=40 Identities=20% Similarity=0.090 Sum_probs=31.2
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.++ .++.. ..+.|+.|+|||+.|+.-.+.
T Consensus 419 ~s~~~~Q~~Adv~g----~pV~~-~~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 419 KNKPFMQFNSDIIN----TKIEV-SKYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp GCHHHHHHHHHHHT----SCEEE-ESCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHC----CeEEe-cCCCcchHHHHHHHHHHHhCc
Confidence 56889999999996 56543 456789999999999876653
No 36
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=71.02 E-value=2.4 Score=31.02 Aligned_cols=40 Identities=20% Similarity=0.135 Sum_probs=31.1
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.++ .++. ...+.|+.|+|||+.|+.-.+.
T Consensus 413 ~s~~~~Qi~ADv~g----~pV~-~~~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 413 ANNFLMQFQSDILG----TRVE-RPEVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp GCHHHHHHHHHHHT----SEEE-EESCCCHHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHhC----CceE-ecCCCCcHHHHHHHHHHHHhCc
Confidence 66889999999996 4543 2457789999999999876554
No 37
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=70.23 E-value=4.1 Score=28.07 Aligned_cols=34 Identities=9% Similarity=-0.158 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhh
Q psy13577 14 AVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVL 51 (75)
Q Consensus 14 Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aail 51 (75)
+++.+++.|+ ......-||..|+|+|+...+.+.
T Consensus 292 ~~~~l~~~~~----~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 292 LKEQISKTYP----NNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp HHHHHHHHST----TCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC----CCCEecCCChhhHHHHHHHHHhhh
Confidence 4578888886 345567799999999999877654
No 38
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=67.34 E-value=3 Score=30.48 Aligned_cols=40 Identities=20% Similarity=0.074 Sum_probs=30.8
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcCC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSGE 54 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~~ 54 (75)
|=|...+++.+.|+ .++... ...|+.|+|||+.|+.-.+.
T Consensus 412 ~s~~~~Qi~ADv~g----~pV~~~-~~~e~~alGaA~lA~~a~G~ 451 (508)
T 3ifr_A 412 RSRVWMGIMADVLQ----RPVQLL-ANPLGSAVGAAWVAAIGGGD 451 (508)
T ss_dssp GCHHHHHHHHHHHT----SCEEEE-ECCSTHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHhC----CeEEec-CCCCchHHHHHHHHHHHhCC
Confidence 66899999999996 565433 34679999999999876653
No 39
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=65.21 E-value=1.8 Score=30.42 Aligned_cols=32 Identities=6% Similarity=-0.075 Sum_probs=24.0
Q ss_pred HHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 14 AVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 14 Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
+++.+++.|+. . -||.+|+|.|+..++..+.+
T Consensus 308 l~~~i~~~~~~----~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 308 LSHYYSDVFEK----A----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp HHHHSSSCEEC----C----SSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCC----C----CCcHHHHHHHHHHHHHHHHh
Confidence 55566666642 1 89999999999999887653
No 40
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=64.21 E-value=3 Score=30.56 Aligned_cols=38 Identities=16% Similarity=0.018 Sum_probs=29.7
Q ss_pred eeeHHHHHHHHHH-hcCccCCCCCcCCCcchhhhhhhhHHhhhh
Q psy13577 9 VTLVVAVAIAKEE-KNGVFYKEPSRGVNPDEAVAYGAAVQAGVL 51 (75)
Q Consensus 9 ~riP~Vq~~l~~~-f~~~~~~~~~~~inpDEaVA~GAAi~Aail 51 (75)
.|=|...+++.+. |+ .++.. ....|+.|+|||+.|+.-
T Consensus 398 a~s~~w~Qi~ADv~~g----~pV~~-~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 398 AEADVFVRALASLRPD----CAVYT-ANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp GGCHHHHHHHHHHSTT----SEEEE-ESSCCCTTGGGHHHHCTT
T ss_pred ccCHHHHHHHhhhcCC----CeEEE-cCCCchHHHHHHHHhCcc
Confidence 3678999999999 96 45543 345688999999999864
No 41
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=63.59 E-value=2.9 Score=29.33 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=29.0
Q ss_pred eeeeHHHHHHHHHHhcCcc----------------CCC----CCcCCCcchhhhhhhhHHhhh
Q psy13577 8 VVTLVVAVAIAKEEKNGVF----------------YKE----PSRGVNPDEAVAYGAAVQAGV 50 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~----------------~~~----~~~~inpDEaVA~GAAi~Aai 50 (75)
..++|.+++.|++.++... ... ....-+|..++.+||++.|..
T Consensus 325 ~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 325 STMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp GGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred ccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 3689999999998775421 011 112235678999999998874
No 42
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=62.01 E-value=2.7 Score=30.23 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=27.4
Q ss_pred eeeHHHHHHHHHHhcCccCCCCC--c---------------CCCcchhhhhhhhHHhhhh
Q psy13577 9 VTLVVAVAIAKEEKNGVFYKEPS--R---------------GVNPDEAVAYGAAVQAGVL 51 (75)
Q Consensus 9 ~riP~Vq~~l~~~f~~~~~~~~~--~---------------~inpDEaVA~GAAi~Aail 51 (75)
.+||.+++++++.|+ .+.. . .-+|.-+.|.|.++++...
T Consensus 339 s~lpgl~e~~~~~~g----~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 339 AKIPRINELATEVFK----SPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp GGSTTHHHHHHHHHT----SCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred hchhhHHHHHHHHHC----CCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 589999999999996 2221 1 1488999999999887654
No 43
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=50.28 E-value=8.1 Score=27.73 Aligned_cols=45 Identities=13% Similarity=-0.035 Sum_probs=32.9
Q ss_pred ccceeeeeHHHHHHHHHHhcCc--cCCCCCcCCCcchhhhhhhhHHh
Q psy13577 4 LGAFVVTLVVAVAIAKEEKNGV--FYKEPSRGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 4 ~~~~~~riP~Vq~~l~~~f~~~--~~~~~~~~inpDEaVA~GAAi~A 48 (75)
-|-|+-+-|.+++.|++.++-. .+.++...-+|.-+-|+|||+.+
T Consensus 312 tGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 312 VGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp ESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred eCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 4667788999999999986300 01455556688899999999875
No 44
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=45.57 E-value=14 Score=26.51 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=24.5
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHh
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~A 48 (75)
|=|...+++.+.|+ .++.. .+.|+.|+|||+.|
T Consensus 405 ks~~~~Qi~ADvlg----~pV~~--~~~e~~alGaa~~A 437 (489)
T 2uyt_A 405 QNTLLNQLCADACG----IRVIA--GPVEASTLGNIGIQ 437 (489)
T ss_dssp GCHHHHHHHHHHHT----SEEEE--CCTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHC----Ceeec--CCccHhHHHHHHHH
Confidence 56889999999996 56542 23699999995444
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=39.22 E-value=25 Score=23.53 Aligned_cols=17 Identities=41% Similarity=0.304 Sum_probs=12.5
Q ss_pred cCCCcchhhhhhhhHHh
Q psy13577 32 RGVNPDEAVAYGAAVQA 48 (75)
Q Consensus 32 ~~inpDEaVA~GAAi~A 48 (75)
.+-..+++.++|||..+
T Consensus 277 ~s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 277 RARLGAEAGLLGAALTA 293 (302)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred EcCCCCcHHHHHHHHHH
Confidence 34445788999999766
No 46
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=29.75 E-value=12 Score=26.12 Aligned_cols=43 Identities=14% Similarity=0.083 Sum_probs=13.5
Q ss_pred eeeeHHHHHHHHHHhcCcc-----------CC--C--CCcCCCcchhhhhhhhHHhhh
Q psy13577 8 VVTLVVAVAIAKEEKNGVF-----------YK--E--PSRGVNPDEAVAYGAAVQAGV 50 (75)
Q Consensus 8 ~~riP~Vq~~l~~~f~~~~-----------~~--~--~~~~inpDEaVA~GAAi~Aai 50 (75)
..++|-+.+.|++.++... .. + +...-+|..++.+|+++.|..
T Consensus 307 ~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 307 STMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp GGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred ccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 3578988888888775321 01 1 112345678999999988864
No 47
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=26.93 E-value=72 Score=24.96 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCccCCCCCc--CCCc-chhhhhhhhHHhhh-hcCC
Q psy13577 13 VAVAIAKEEKNGVFYKEPSR--GVNP-DEAVAYGAAVQAGV-LSGE 54 (75)
Q Consensus 13 ~Vq~~l~~~f~~~~~~~~~~--~inp-DEaVA~GAAi~Aai-ls~~ 54 (75)
.+.+.+.+.+.. .|-++.. .+.| |..+|+|+|+.|+. |.+.
T Consensus 720 ~L~~~l~~~L~~-~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~~~ 764 (772)
T 4g9i_A 720 LITKMIRKVVEA-NGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEGY 764 (772)
T ss_dssp HHHHHHHHHGGG-SSCCCCCCTTSCSSGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHH-CCCEEEccCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 345666666542 0122222 2334 99999999988875 4443
No 48
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=24.45 E-value=34 Score=22.48 Aligned_cols=34 Identities=9% Similarity=-0.077 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhh
Q psy13577 12 VVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAG 49 (75)
Q Consensus 12 P~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aa 49 (75)
|.+.+.+++.+.+ .++..+- .+++.++||+..+.
T Consensus 253 ~~~~~~l~~~~~~---~~i~~~~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 253 NIYHKFFTLYLEK---EGIISDL-GKRSPEIGAVILAY 286 (299)
T ss_dssp HHHHHHHHHHHHH---TTCEEEC-CSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC---CeEeccC-CCCChHHHHHHHHH
Confidence 7777888887764 3444344 56789999998764
No 49
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=23.42 E-value=32 Score=15.71 Aligned_cols=14 Identities=14% Similarity=-0.043 Sum_probs=11.0
Q ss_pred eHHHHHHHHHHhcC
Q psy13577 11 LVVAVAIAKEEKNG 24 (75)
Q Consensus 11 iP~Vq~~l~~~f~~ 24 (75)
+.+|-+.|++||++
T Consensus 5 ~kkIgQkIkdFf~~ 18 (26)
T 2fcg_F 5 FKRIVQRIKDFLRN 18 (26)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 45677899999975
No 50
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=22.10 E-value=77 Score=20.63 Aligned_cols=16 Identities=31% Similarity=0.223 Sum_probs=11.8
Q ss_pred CCcchhhhhhhhHHhh
Q psy13577 34 VNPDEAVAYGAAVQAG 49 (75)
Q Consensus 34 inpDEaVA~GAAi~Aa 49 (75)
-..+++.++|||..+-
T Consensus 271 ~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 271 TYHADANLYGALVNWL 286 (292)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred ccCChhhHHHHHHHHH
Confidence 3457789999997653
No 51
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=21.16 E-value=27 Score=25.92 Aligned_cols=44 Identities=11% Similarity=-0.050 Sum_probs=28.6
Q ss_pred eeHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhcC
Q psy13577 10 TLVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLSG 53 (75)
Q Consensus 10 riP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails~ 53 (75)
..|..++.+++++..+.+.....-...++..-+|||+.||.-.+
T Consensus 420 ~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~ 463 (470)
T 3f9m_A 420 LHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACK 463 (470)
T ss_dssp HCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC
T ss_pred hCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHH
Confidence 46888888888875432111122234477788999999987654
No 52
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.48 E-value=23 Score=26.09 Aligned_cols=42 Identities=10% Similarity=0.014 Sum_probs=25.8
Q ss_pred eHHHHHHHHHHhcCccCCCCCcCCCcchhhhhhhhHHhhhhc
Q psy13577 11 LVVAVAIAKEEKNGVFYKEPSRGVNPDEAVAYGAAVQAGVLS 52 (75)
Q Consensus 11 iP~Vq~~l~~~f~~~~~~~~~~~inpDEaVA~GAAi~Aails 52 (75)
.|..++.+++.+..+.+.....-...++.--.|||+.||.-.
T Consensus 397 ~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~ 438 (445)
T 3hm8_A 397 HPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVAC 438 (445)
T ss_dssp CTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHHH
Confidence 577788887777543222212223345667799999988744
Done!