BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13580
(109 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
VLED+D+ K D+DEIVLVGGSTRIPK+QQLVKEFFN K
Sbjct: 322 VLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGK 359
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKETAEAYLGKKVTHAVVTVPAYF
Sbjct: 128 TKMKETAEAYLGKKVTHAVVTVPAYF 153
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
VLED+D+ K D+DEIVLVGGSTRIPK+QQLVKEFFN K
Sbjct: 343 VLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGK 380
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKETAEAYLGKKVTHAVVTVPAYF
Sbjct: 149 TKMKETAEAYLGKKVTHAVVTVPAYF 174
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
VL+D+ + KKDVD+IVLVGGSTRIPKVQQL++ +F+ K
Sbjct: 333 VLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGK 370
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
KMK+ AE YLG KVTHAVVTVPAYF
Sbjct: 139 GKMKQIAEDYLGTKVTHAVVTVPAYF 164
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
VL+D+ + KKDVD+IVLVGGSTRIPKVQQL++ +F+ K
Sbjct: 329 VLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGK 366
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
KMK+ AE YLG KVTHAVVTVPAYF
Sbjct: 135 GKMKQIAEDYLGTKVTHAVVTVPAYF 160
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 33/38 (86%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
VL+DA M+K+ V ++VLVGGSTRIPKVQ L++EFFN K
Sbjct: 337 VLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQEFFNGK 374
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 83 KMKETAEAYLGKKVTHAVVTVPAYF 107
KMKE +EAYLG+++ +AVVTVPAYF
Sbjct: 142 KMKEISEAYLGRQIKNAVVTVPAYF 166
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
Query: 46 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKET------AEAYLGKKVTHA 99
VL+DA ++K +DE+VLVGGSTRIPKVQ+L+ +FF+ K E A AY G V A
Sbjct: 326 VLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAY-GAAVQGA 384
Query: 100 VVT 102
++T
Sbjct: 385 ILT 387
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEA +GKKV AV+TVPAYF
Sbjct: 130 TKMKEIAEAKIGKKVEKAVITVPAYF 155
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + EIVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 342 LRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 378
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG KV AV+TVPAYF
Sbjct: 144 TKMKEIAEAYLGGKVHSAVITVPAYF 169
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + EIVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 324 LRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+K KE AEAYLG KV AV+TVPAYF
Sbjct: 126 TKXKEIAEAYLGGKVHSAVITVPAYF 151
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 318 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 354
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AVVTVPAYF
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYF 147
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 318 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 354
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AVVTVPAYF
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYF 147
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 326 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 362
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 130 TKMKEIAEAYLGKTVTNAVVTVPAYF 155
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 318 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 354
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AVVTVPAYF
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYF 147
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 340 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 376
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 144 TKMKEIAEAYLGKTVTNAVVTVPAYF 169
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN K
Sbjct: 341 LRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGK 377
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
SKMKETAEAYLG+ V HAV+TVPAYF
Sbjct: 145 SKMKETAEAYLGQPVKHAVITVPAYF 170
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + +IVLVGGSTRIPK+Q+L+++FFN K
Sbjct: 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK 357
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLGK VT+AVVTVPAYF
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYF 150
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA M+K + +IVLVGGSTRIPKVQ+L++++FN +
Sbjct: 345 LRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGR 381
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+K+KETAEA+LG VT+AV+TVPAYF
Sbjct: 149 TKLKETAEAFLGHPVTNAVITVPAYF 174
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 321 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 357
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 125 TKMKEIAEAYLGYPVTNAVITVPAYF 150
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 321 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 357
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 125 TKMKEIAEAYLGYPVTNAVITVPAYF 150
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 319 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 355
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 123 TKMKEIAEAYLGYPVTNAVITVPAYF 148
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 321 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 357
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+K KE AEAYLG VT+AV+TVPAYF
Sbjct: 125 TKXKEIAEAYLGYPVTNAVITVPAYF 150
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 343 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 379
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 147 TKMKEIAEAYLGYPVTNAVITVPAYF 172
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 325 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 361
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 129 TKMKEIAEAYLGYPVTNAVITVPAYF 154
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 324 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 360
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 128 TKMKEIAEAYLGYPVTNAVITVPAYF 153
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 324 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 360
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 82 SKMKETAEAYLGKKVTHAVVTVPAYF 107
+KMKE AEAYLG VT+AV+TVPAYF
Sbjct: 128 TKMKEIAEAYLGYPVTNAVITVPAYF 153
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 47 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK 83
L DA ++K + ++VLVGGSTRIPKVQ+L+++FFN +
Sbjct: 141 LRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGR 177
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80
L + L+DA ++ D+D+++LVGG TR+P VQ+ V EFF
Sbjct: 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 83 KMKETAEAYLGKKVTHAVVTVPAYF 107
KMK+TAE YLG+ VT AV+TVPAYF
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYF 146
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80
L + L+DA ++ D+D+++LVGG TR+P VQ+ V EFF
Sbjct: 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF 357
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 83 KMKETAEAYLGKKVTHAVVTVPAYF 107
KMK+TAE YLG+ VT AV+TVPAYF
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYF 146
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80
L + L+DA ++ D+D+++LVGG TR P VQ+ V EFF
Sbjct: 320 LKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFF 357
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 83 KMKETAEAYLGKKVTHAVVTVPAYF 107
K K+TAE YLG+ VT AV+TVPAYF
Sbjct: 122 KXKKTAEDYLGEPVTEAVITVPAYF 146
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 41 GALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 77
G + L+DA + D+D+++LVGGSTRIP VQ+ +K
Sbjct: 287 GPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIK 323
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 84 MKETAEAYLGKKVTHAVVTVPAYF 107
+K AE YLG+ VT AV+TVPAYF
Sbjct: 97 LKSYAEDYLGEPVTRAVITVPAYF 120
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKET 87
+T L A ++ ++VD + ++GG+TRIP ++Q + E F + T
Sbjct: 323 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 367
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKET 87
+T L A ++ ++VD + ++GG+TRIP ++Q + E F + T
Sbjct: 320 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 364
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKET 87
+T L A ++ ++VD + ++GG+TRIP ++Q + E F + T
Sbjct: 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 365
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 43 LTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKET 87
+T L A ++ ++VD + ++GG+TRIP ++Q + E F + T
Sbjct: 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 365
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKETAEAY 91
NHAS +V D ++D + L V ++ + ++ A Y
Sbjct: 95 NHASAHPQEAGDNVVFTIKDKAEEDAEPSTLT--------VSEIATRYLR-RLVGAASEY 145
Query: 92 LGKKVTHAVVTVPAYF 107
LGKKVT AV+T+P F
Sbjct: 146 LGKKVTSAVITIPTNF 161
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 50 ADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80
A ++ DVDE+++ GG++ P++ + F
Sbjct: 338 AGLDPLDVDEVIMSGGTSNTPRIAANFRYIF 368
>pdb|1E4G|T Chain T, Ftsa (Atp-Bound Form) From Thermotoga Maritima
Length = 419
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 60 IVLVGGSTRIPKVQQLVKEFFNSKMK 85
+VL GG +IP++ +L E F S ++
Sbjct: 332 VVLTGGGAKIPRINELATEVFKSPVR 357
>pdb|1E4F|T Chain T, Ftsa (Apo Form) From Thermotoga Maritima
pdb|4A2A|A Chain A, Thermotoga Maritima Ftsa:ftsz(336-351)
pdb|4A2A|B Chain B, Thermotoga Maritima Ftsa:ftsz(336-351)
pdb|4A2B|A Chain A, Thermotoga Maritima Ftsa With Atp Gamma S
Length = 419
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 60 IVLVGGSTRIPKVQQLVKEFFNSKMK 85
+VL GG +IP++ +L E F S ++
Sbjct: 332 VVLTGGGAKIPRINELATEVFKSPVR 357
>pdb|1IHG|A Chain A, Bovine Cyclophilin 40, Monoclinic Form
pdb|1IIP|A Chain A, Bovine Cyclophilin 40, Tetragonal Form
Length = 370
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 48 EDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKETA 88
EDAD++ KDVD+I+L+ ++ + FF S+ E A
Sbjct: 207 EDADVDLKDVDKILLIS-----EDLKNIGNTFFKSQNWEMA 242
>pdb|2O36|A Chain A, Crystal Structure Of Engineered Thimet Oligopeptidase With
Neurolysin Specificity In Neurotensin Cleavage Site
Length = 674
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 69 IPKVQQLVKEFFNSKMKETAEAYLGKKVT 97
+P+ ++ V+E FNS+ KE A L + VT
Sbjct: 218 VPETRRKVEEAFNSRCKEENSAILKELVT 246
>pdb|1S4B|P Chain P, Crystal Structure Of Human Thimet Oligopeptidase
Length = 674
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 69 IPKVQQLVKEFFNSKMKETAEAYLGKKVT 97
+P+ ++ V+E FNS+ KE A L + VT
Sbjct: 218 VPETRRKVEEAFNSRCKEENSAILKELVT 246
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 20 QPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP 70
+P +P +E N GL +I+ D D+ +VL GG++ IP
Sbjct: 377 RPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIP 427
>pdb|2ZZA|A Chain A, Moritella Profunda Dihydrofolate Reductase Complex With
Nadp+ And Folate
pdb|2ZZA|B Chain B, Moritella Profunda Dihydrofolate Reductase Complex With
Nadp+ And Folate
Length = 162
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 47 LEDADMNKKDVDEIVLVGGST 67
LEDA + DV+E++++GG+T
Sbjct: 80 LEDAVVAAGDVEELMIIGGAT 100
>pdb|3IA4|A Chain A, Moritella Profunda Dihydrofolate Reductase (Dhfr) In
Complex With Nadph And Methotrexate (Mtx)
pdb|3IA4|B Chain B, Moritella Profunda Dihydrofolate Reductase (Dhfr) In
Complex With Nadph And Methotrexate (Mtx)
pdb|3IA4|C Chain C, Moritella Profunda Dihydrofolate Reductase (Dhfr) In
Complex With Nadph And Methotrexate (Mtx)
pdb|3IA4|D Chain D, Moritella Profunda Dihydrofolate Reductase (Dhfr) In
Complex With Nadph And Methotrexate (Mtx)
pdb|3IA5|A Chain A, Moritella Profunda Dihydrofolate Reductase (Dhfr)
pdb|3IA5|B Chain B, Moritella Profunda Dihydrofolate Reductase (Dhfr)
Length = 162
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 47 LEDADMNKKDVDEIVLVGGST 67
LEDA + DV+E++++GG+T
Sbjct: 80 LEDAVVAAGDVEELMIIGGAT 100
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,090,024
Number of Sequences: 62578
Number of extensions: 118729
Number of successful extensions: 459
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 125
length of query: 109
length of database: 14,973,337
effective HSP length: 73
effective length of query: 36
effective length of database: 10,405,143
effective search space: 374585148
effective search space used: 374585148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)