Query psy13580
Match_columns 109
No_of_seqs 162 out of 1185
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 22:51:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13580.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13580hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 99.6 1.3E-16 4.6E-21 128.4 5.1 85 18-103 295-384 (605)
2 3d2f_A Heat shock protein homo 99.6 2.2E-16 7.5E-21 128.7 3.9 84 19-103 297-385 (675)
3 4gni_A Putative heat shock pro 99.6 8.4E-16 2.9E-20 117.4 6.5 85 19-104 307-404 (409)
4 1yuw_A Heat shock cognate 71 k 99.6 1.1E-15 3.8E-20 121.9 5.2 84 19-103 293-382 (554)
5 3i33_A Heat shock-related 70 k 99.6 1.2E-15 4.2E-20 116.1 5.1 83 20-103 315-403 (404)
6 2kho_A Heat shock protein 70; 99.6 2.4E-16 8.1E-21 126.9 0.5 84 19-103 296-384 (605)
7 2v7y_A Chaperone protein DNAK; 99.6 1.4E-15 4.7E-20 120.0 4.7 84 19-103 265-353 (509)
8 1dkg_D Molecular chaperone DNA 99.5 5.1E-15 1.7E-19 112.0 6.2 82 20-102 297-383 (383)
9 3qfu_A 78 kDa glucose-regulate 99.5 3.5E-15 1.2E-19 112.8 5.2 83 19-102 306-394 (394)
10 1jce_A ROD shape-determining p 99.2 4.7E-12 1.6E-16 94.5 3.2 82 20-102 238-327 (344)
11 3h1q_A Ethanolamine utilizatio 98.8 6.8E-09 2.3E-13 74.8 6.9 70 24-98 198-272 (272)
12 4a2a_A Cell division protein F 98.8 5.7E-09 2E-13 80.8 6.6 61 21-81 287-353 (419)
13 2ych_A Competence protein PILM 98.7 2.3E-08 8E-13 75.1 5.5 61 21-81 269-331 (377)
14 2fsj_A Hypothetical protein TA 98.3 5.9E-07 2E-11 67.6 4.2 56 22-82 264-320 (346)
15 4ehu_A Activator of 2-hydroxyi 98.2 7.5E-07 2.6E-11 64.5 3.8 66 29-99 183-253 (276)
16 2zgy_A Plasmid segregation pro 97.9 2E-05 7E-10 58.2 6.3 68 24-98 244-319 (320)
17 2fxu_A Alpha-actin-1, actin, a 97.7 3.3E-06 1.1E-10 63.8 -1.3 78 21-99 248-348 (375)
18 3js6_A Uncharacterized PARM pr 97.5 4E-05 1.4E-09 58.0 3.1 68 27-99 265-335 (355)
19 1k8k_A ARP3, actin-like protei 97.5 2.2E-05 7.4E-10 59.9 1.3 62 20-81 268-340 (418)
20 4apw_A ALP12; actin-like prote 97.0 0.0018 6.3E-08 48.1 6.8 67 23-96 249-320 (329)
21 1k8k_B ARP2, actin-like protei 95.8 0.0023 7.9E-08 48.6 1.1 60 21-81 252-322 (394)
22 3i8b_A Xylulose kinase; strain 95.6 0.026 9.1E-07 44.4 6.5 71 24-100 395-471 (515)
23 3l0q_A Xylulose kinase; xlylul 95.6 0.025 8.6E-07 44.7 6.2 74 23-101 409-490 (554)
24 1hux_A Activator of (R)-2-hydr 95.5 0.037 1.2E-06 40.0 6.4 65 29-99 185-255 (270)
25 2zf5_O Glycerol kinase; hypert 95.5 0.019 6.6E-07 44.7 5.2 71 24-100 365-440 (497)
26 4bc3_A Xylulose kinase; transf 95.5 0.026 8.8E-07 44.6 5.9 71 29-101 407-482 (538)
27 1nbw_A Glycerol dehydratase re 95.5 0.018 6.3E-07 46.5 5.1 38 44-81 533-575 (607)
28 3ll3_A Gluconate kinase; xylul 95.3 0.041 1.4E-06 43.0 6.5 72 23-100 363-440 (504)
29 2d0o_A DIOL dehydratase-reacti 95.1 0.04 1.4E-06 44.5 5.9 29 53-81 545-573 (610)
30 3ifr_A Carbohydrate kinase, FG 95.1 0.042 1.4E-06 43.0 6.0 72 23-100 370-447 (508)
31 3hz6_A Xylulokinase; xylulose, 95.0 0.041 1.4E-06 43.1 5.7 42 57-100 403-450 (511)
32 3g25_A Glycerol kinase; IDP007 94.6 0.088 3E-06 41.0 6.6 73 23-100 373-451 (501)
33 2dpn_A Glycerol kinase; thermu 94.4 0.061 2.1E-06 41.9 5.3 73 23-100 367-445 (495)
34 2itm_A Xylulose kinase, xylulo 94.2 0.054 1.8E-06 42.0 4.6 44 56-101 386-435 (484)
35 3ezw_A Glycerol kinase; glycer 94.2 0.1 3.6E-06 40.9 6.3 75 22-101 370-450 (526)
36 3h3n_X Glycerol kinase; ATP-bi 94.1 0.13 4.6E-06 40.1 6.8 74 22-100 371-450 (506)
37 3jvp_A Ribulokinase; PSI-II, N 94.1 0.046 1.6E-06 43.4 4.1 73 24-102 410-489 (572)
38 4e1j_A Glycerol kinase; struct 94.0 0.084 2.9E-06 41.5 5.4 44 56-101 425-473 (520)
39 2d4w_A Glycerol kinase; alpha 93.9 0.13 4.4E-06 40.1 6.2 74 23-101 372-451 (504)
40 2w40_A Glycerol kinase, putati 93.7 0.12 4.2E-06 40.2 5.9 73 23-100 375-454 (503)
41 2p3r_A Glycerol kinase; glycer 93.7 0.049 1.7E-06 42.7 3.5 73 23-100 370-448 (510)
42 2uyt_A Rhamnulokinase; rhamnos 91.6 0.18 6.1E-06 39.0 4.1 38 56-95 393-434 (489)
43 1hnj_A Beta-ketoacyl-acyl carr 90.3 0.67 2.3E-05 33.4 5.9 45 34-81 215-259 (317)
44 2ews_A Pantothenate kinase; PA 90.1 0.56 1.9E-05 34.5 5.4 70 22-97 206-285 (287)
45 1zow_A 3-oxoacyl-[acyl-carrier 89.5 0.94 3.2E-05 32.5 6.2 43 35-80 210-252 (313)
46 2x3e_A 3-oxoacyl-[acyl-carrier 88.8 0.96 3.3E-05 32.9 5.9 43 35-80 222-264 (331)
47 3h6e_A Carbohydrate kinase, FG 88.3 0.62 2.1E-05 36.3 4.8 42 58-101 389-436 (482)
48 2ebd_A 3-oxoacyl-[acyl-carrier 88.3 1 3.5E-05 32.2 5.6 43 35-80 208-250 (309)
49 1ub7_A 3-oxoacyl-[acyl-carrier 88.3 0.87 3E-05 32.9 5.3 43 35-80 218-260 (322)
50 3qbx_A Anhydro-N-acetylmuramic 88.1 1.1 3.9E-05 34.1 6.0 43 39-84 269-311 (371)
51 1mzj_A Beta-ketoacylsynthase I 88.0 1 3.5E-05 32.9 5.6 43 35-80 229-271 (339)
52 3eno_A Putative O-sialoglycopr 87.2 1.2 4E-05 33.2 5.5 43 32-74 49-91 (334)
53 3cqy_A Anhydro-N-acetylmuramic 86.9 1.2 4.2E-05 33.9 5.6 47 32-82 269-315 (370)
54 4ewp_A 3-oxoacyl-[acyl-carrier 86.2 1.5 5.1E-05 32.1 5.6 43 39-81 66-110 (350)
55 2ivn_A O-sialoglycoprotein end 85.3 1.4 4.7E-05 32.5 5.1 44 30-73 42-85 (330)
56 1u6e_A 3-oxoacyl-[acyl-carrier 85.2 1.7 5.8E-05 31.4 5.4 42 36-80 231-272 (335)
57 4fo0_A Actin-related protein 8 84.9 0.55 1.9E-05 36.9 2.8 24 57-80 501-524 (593)
58 3ov2_A Curcumin synthase; type 84.6 3.7 0.00013 30.9 7.3 50 32-81 99-149 (393)
59 1ted_A PKS18; thiolase fold, s 84.6 1.6 5.4E-05 32.7 5.2 43 35-80 285-327 (393)
60 3euo_A Type III pentaketide sy 83.7 3.9 0.00013 30.7 7.0 48 34-81 80-128 (379)
61 4dfe_A 3-oxoacyl-[acyl-carrier 83.4 3 0.0001 30.4 6.1 44 34-80 231-274 (333)
62 4b9q_A Chaperone protein DNAK; 83.1 0.92 3.1E-05 36.2 3.5 45 61-108 103-147 (605)
63 3oit_A OS07G0271500 protein; t 82.1 5.3 0.00018 30.0 7.2 49 33-81 94-143 (387)
64 2gel_A Putative GRAM negative 81.9 2 6.9E-05 30.2 4.6 39 35-73 34-72 (231)
65 3dwl_A Actin-related protein 3 81.5 0.59 2E-05 35.9 1.7 43 38-80 306-350 (427)
66 1ee0_A 2-pyrone synthase; poly 81.5 5.4 0.00018 30.0 7.1 49 33-81 105-154 (402)
67 3a5r_A Benzalacetone synthase; 81.2 5.1 0.00017 29.9 6.8 49 33-81 96-145 (387)
68 1i88_A CHS2, chalcone synthase 81.1 6.3 0.00022 29.4 7.3 49 33-81 100-149 (389)
69 2p0u_A Stilbenecarboxylate syn 81.0 6.2 0.00021 29.8 7.3 49 33-81 118-167 (413)
70 1xes_A Dihydropinosylvin synth 80.8 5.4 0.00019 30.2 6.9 49 33-81 123-172 (413)
71 3s21_A 3-oxoacyl-[ACP] synthas 80.7 3.9 0.00013 30.0 5.9 43 35-80 244-286 (345)
72 3r6m_A YEAZ, resuscitation pro 80.5 1.9 6.5E-05 30.2 4.0 42 34-75 34-75 (213)
73 3awk_A Chalcone synthase-like 80.4 6.7 0.00023 29.5 7.3 49 33-81 113-162 (402)
74 1u0m_A Putative polyketide syn 80.3 7.4 0.00025 28.9 7.4 49 33-81 82-131 (382)
75 3il3_A 3-oxoacyl-[acyl-carrier 80.2 3.3 0.00011 30.3 5.3 46 36-81 59-106 (323)
76 4efi_A 3-oxoacyl-(acyl-carrier 80.1 3.2 0.00011 30.7 5.3 46 36-81 67-114 (354)
77 1j3n_A 3-oxoacyl-(acyl-carrier 79.9 1.8 6.3E-05 32.5 4.0 44 37-80 275-320 (408)
78 1xho_A Chorismate mutase; sout 79.6 2.9 0.0001 27.9 4.4 31 33-63 47-77 (148)
79 3e1h_A PKSIIINC, putative unch 79.5 6.3 0.00022 30.6 7.0 48 34-81 109-157 (465)
80 4dfe_A 3-oxoacyl-[acyl-carrier 79.3 3.6 0.00012 30.0 5.3 44 38-81 68-113 (333)
81 2a6a_A Hypothetical protein TM 79.3 2.1 7E-05 30.1 3.8 42 33-74 43-84 (218)
82 3il6_A 3-oxoacyl-[acyl-carrier 79.0 3.7 0.00013 29.9 5.3 46 36-81 53-100 (321)
83 2d3m_A Pentaketide chromone sy 78.8 6.8 0.00023 29.4 6.9 49 33-81 113-162 (406)
84 2h84_A Steely1; thiolase-fold, 78.4 7.1 0.00024 28.7 6.8 49 33-81 93-142 (374)
85 2ebd_A 3-oxoacyl-[acyl-carrier 78.0 4.4 0.00015 28.8 5.4 47 35-81 50-98 (309)
86 3v7i_A Putative polyketide syn 77.9 9.8 0.00034 29.0 7.6 48 34-81 136-184 (413)
87 3h78_A PQS biosynthetic enzyme 77.8 4.8 0.00016 29.9 5.7 45 37-81 76-122 (359)
88 3gwa_A 3-oxoacyl-(acyl-carrier 77.7 5.2 0.00018 29.7 5.9 43 35-80 264-306 (365)
89 3h78_A PQS biosynthetic enzyme 77.4 6.2 0.00021 29.3 6.2 43 35-80 252-294 (359)
90 1dbf_A Protein (chorismate mut 77.4 3.4 0.00012 26.9 4.1 31 33-63 18-48 (127)
91 3gwa_A 3-oxoacyl-(acyl-carrier 77.2 4 0.00014 30.3 5.1 43 39-81 84-128 (365)
92 3il3_A 3-oxoacyl-[acyl-carrier 77.2 6.3 0.00021 28.7 6.1 43 35-80 222-264 (323)
93 1u0m_A Putative polyketide syn 77.1 2.5 8.5E-05 31.5 3.9 40 37-80 253-292 (382)
94 1ted_A PKS18; thiolase fold, s 77.0 8 0.00027 28.8 6.7 49 33-81 111-160 (393)
95 3s3l_A CERJ; acyltransferase, 76.9 3.8 0.00013 30.4 4.9 43 34-76 235-278 (357)
96 1ejb_A Lumazine synthase; anal 76.6 2.1 7.2E-05 29.1 3.1 46 32-78 27-72 (168)
97 2i7n_A Pantothenate kinase 1; 76.5 7.1 0.00024 29.6 6.3 22 59-80 308-330 (360)
98 1u6e_A 3-oxoacyl-[acyl-carrier 76.2 5.2 0.00018 28.8 5.4 47 35-81 61-109 (335)
99 2kho_A Heat shock protein 70; 75.7 2.2 7.6E-05 34.0 3.5 44 62-108 104-147 (605)
100 3led_A 3-oxoacyl-acyl carrier 75.3 4.2 0.00014 30.7 4.8 46 36-81 118-165 (392)
101 2gp6_A 3-oxoacyl-[acyl-carrier 75.2 3.1 0.00011 31.7 4.1 46 37-82 302-349 (434)
102 1tqy_A Beta-ketoacyl synthase/ 74.9 3.3 0.00011 31.3 4.1 44 38-81 284-329 (424)
103 1ufy_A Chorismate mutase; shik 74.9 4.4 0.00015 26.2 4.1 31 33-63 17-48 (122)
104 3s21_A 3-oxoacyl-[ACP] synthas 74.7 5.2 0.00018 29.3 5.1 43 39-81 72-116 (345)
105 1hnj_A Beta-ketoacyl-acyl carr 74.4 6.2 0.00021 28.2 5.4 47 35-81 51-99 (317)
106 1zow_A 3-oxoacyl-[acyl-carrier 74.4 6.2 0.00021 28.1 5.4 47 35-81 51-99 (313)
107 2gqd_A 3-oxoacyl-[acyl-carrier 74.4 3.5 0.00012 31.4 4.2 45 37-81 301-347 (437)
108 3nq4_A 6,7-dimethyl-8-ribityll 74.3 8.1 0.00028 25.9 5.5 47 32-79 23-70 (156)
109 4efi_A 3-oxoacyl-(acyl-carrier 74.0 6.8 0.00023 28.9 5.6 43 35-80 242-284 (354)
110 3d2f_A Heat shock protein homo 74.0 1.8 6.1E-05 35.2 2.6 35 73-108 116-150 (675)
111 2dyy_A UPF0076 protein PH0854; 74.0 13 0.00046 23.2 6.4 52 34-85 49-101 (126)
112 1mzj_A Beta-ketoacylsynthase I 73.2 6.7 0.00023 28.4 5.4 47 35-81 60-108 (339)
113 2iwz_A 3-oxoacyl-[acyl-carrier 73.2 3.9 0.00013 31.2 4.2 45 37-81 301-347 (438)
114 3s3l_A CERJ; acyltransferase, 73.1 6.2 0.00021 29.2 5.2 45 36-80 55-102 (357)
115 1yuw_A Heat shock cognate 71 k 72.1 2.2 7.4E-05 33.6 2.6 35 73-108 117-151 (554)
116 2h84_A Steely1; thiolase-fold, 72.0 4.9 0.00017 29.6 4.4 41 36-80 266-312 (374)
117 1xpm_A 3-hydroxy-3-methylgluta 71.9 5 0.00017 30.1 4.5 36 34-69 204-239 (396)
118 1e5m_A KAS II, beta ketoacyl a 71.8 2.6 8.9E-05 31.8 2.9 45 37-81 281-327 (416)
119 3qb0_A Actin-related protein 4 71.0 2.4 8.1E-05 33.4 2.6 42 39-80 394-437 (498)
120 3zyy_X Iron-sulfur cluster bin 70.7 4.1 0.00014 33.1 3.9 47 28-74 261-307 (631)
121 1ub7_A 3-oxoacyl-[acyl-carrier 70.6 7.5 0.00026 27.8 5.0 47 35-81 50-98 (322)
122 3lma_A Stage V sporulation pro 70.3 3.9 0.00013 30.9 3.5 33 27-62 50-82 (347)
123 4dd5_A Acetyl-COA acetyltransf 69.8 9.3 0.00032 28.6 5.6 45 37-81 33-79 (396)
124 3led_A 3-oxoacyl-acyl carrier 68.8 6.8 0.00023 29.5 4.6 44 33-79 287-330 (392)
125 4ewp_A 3-oxoacyl-[acyl-carrier 68.7 6.4 0.00022 28.7 4.4 43 35-80 247-289 (350)
126 1qd9_A Purine regulatory prote 68.6 16 0.00053 22.9 5.7 52 34-85 47-99 (124)
127 4am6_A Actin-like protein ARP8 68.6 3.7 0.00013 33.6 3.2 27 56-82 500-526 (655)
128 4e1l_A Acetoacetyl-COA thiolas 68.1 4.8 0.00016 30.1 3.6 43 38-80 32-76 (395)
129 1tqy_B Actinorhodin polyketide 67.6 3.1 0.00011 31.3 2.5 44 38-81 280-325 (415)
130 2ewc_A Conserved hypothetical 67.5 16 0.00054 23.1 5.6 53 33-85 39-92 (126)
131 3flo_B DNA polymerase alpha ca 67.3 6.2 0.00021 27.6 3.8 58 4-61 130-201 (206)
132 2b33_A Protein synthesis inhib 67.2 18 0.00062 23.3 5.9 52 34-85 61-113 (140)
133 3ss6_A Acetyl-COA acetyltransf 67.0 5.2 0.00018 30.0 3.6 43 38-80 32-76 (394)
134 3i7t_A RV2704, putative unchar 66.9 13 0.00043 24.5 5.2 53 33-85 42-95 (149)
135 2ix4_A 3-oxoacyl-[acyl-carrier 66.8 3.8 0.00013 31.1 2.9 44 37-80 294-339 (431)
136 3v4d_A Aminoacrylate peracid r 66.4 18 0.0006 23.0 5.7 51 35-85 57-108 (134)
137 3lwd_A 6-phosphogluconolactona 66.2 9 0.00031 26.8 4.6 48 26-78 8-55 (226)
138 2cvl_A TTHA0137, protein trans 66.0 19 0.00064 22.5 5.7 52 34-85 47-99 (124)
139 1ox0_A Beta ketoacyl-acyl carr 65.9 3.5 0.00012 31.3 2.5 46 37-82 296-343 (430)
140 3zyy_X Iron-sulfur cluster bin 65.9 16 0.00055 29.7 6.5 57 19-76 498-554 (631)
141 1jd1_A Hypothetical 13.9 kDa p 65.2 20 0.00067 22.6 5.7 53 33-85 50-103 (129)
142 3i33_A Heat shock-related 70 k 65.2 4.8 0.00016 29.8 3.1 36 72-108 135-170 (404)
143 2wge_A 3-oxoacyl-[acyl-carrier 65.0 5.4 0.00018 30.2 3.4 33 37-69 285-317 (416)
144 2wya_A Hydroxymethylglutaryl-C 65.0 7.4 0.00025 29.9 4.2 46 35-80 54-101 (460)
145 4gni_A Putative heat shock pro 64.6 4.1 0.00014 30.3 2.6 36 72-108 127-162 (409)
146 3qfu_A 78 kDa glucose-regulate 64.1 4.8 0.00016 29.5 2.9 36 72-108 130-165 (394)
147 1v8d_A Hypothetical protein (T 64.1 8.4 0.00029 27.5 4.0 39 26-68 35-73 (235)
148 3eno_A Putative O-sialoglycopr 63.8 20 0.00068 26.4 6.3 41 35-80 233-273 (334)
149 3m1x_A Putative endoribonuclea 63.8 22 0.00077 23.1 5.9 53 33-85 71-124 (148)
150 1x25_A Hypothetical UPF0076 pr 63.8 21 0.00074 22.4 5.7 53 33-85 50-103 (128)
151 3o04_A LMO2201 protein, beta-k 63.4 6 0.00021 29.7 3.4 45 37-81 277-323 (413)
152 3kzu_A 3-oxoacyl-(acyl-carrier 63.4 5.9 0.0002 30.0 3.4 43 38-81 294-338 (428)
153 2ivn_A O-sialoglycoprotein end 63.3 17 0.00058 26.5 5.8 41 35-80 228-268 (330)
154 3tsy_A Fusion protein 4-coumar 63.2 9 0.00031 31.8 4.7 42 36-80 863-904 (979)
155 1ulq_A Putative acetyl-COA ace 63.0 14 0.00048 27.6 5.4 44 38-81 29-75 (401)
156 3quw_A Protein MMF1; chorismat 62.9 21 0.00073 23.4 5.7 52 34-85 75-127 (153)
157 3ho9_A 3-oxoacyl-[acyl-carrier 62.9 6.2 0.00021 29.9 3.4 44 38-81 293-338 (427)
158 3goa_A 3-ketoacyl-COA thiolase 62.5 7 0.00024 29.2 3.6 43 38-80 30-76 (387)
159 4ewg_A Beta-ketoacyl synthase; 62.4 4.9 0.00017 30.2 2.7 47 36-82 278-326 (412)
160 2f82_A HMG-COA synthase; HMGS1 62.3 10 0.00035 29.0 4.6 47 35-81 52-100 (450)
161 3r0p_A L-PSP putative endoribo 62.2 23 0.0008 22.1 5.6 52 34-85 51-103 (127)
162 2i0f_A 6,7-dimethyl-8-ribityll 61.8 7.2 0.00025 26.2 3.2 44 32-79 23-66 (157)
163 2p8u_A Hydroxymethylglutaryl-C 61.4 10 0.00035 29.4 4.4 46 35-80 73-120 (478)
164 3gtz_A Putative translation in 61.3 26 0.00089 22.0 5.7 49 33-81 38-87 (124)
165 3tsy_A Fusion protein 4-coumar 61.2 28 0.00096 28.8 7.3 48 34-81 688-736 (979)
166 3lyb_A Putative endoribonuclea 61.2 21 0.00073 23.7 5.5 53 33-85 70-123 (165)
167 3svk_A Acetyl-COA acetyltransf 60.8 12 0.00042 28.2 4.7 42 39-80 36-81 (407)
168 2cwj_A Putative endonuclease; 60.8 19 0.00064 22.4 5.0 52 34-85 43-95 (123)
169 1qu9_A YJGF protein; structura 60.5 26 0.0009 21.9 5.7 50 34-83 48-98 (128)
170 1xrg_A Putative translation in 60.1 19 0.00064 23.7 5.1 52 34-85 80-132 (156)
171 3t3l_A Frataxin, mitochondrial 60.0 11 0.00039 24.3 3.8 34 16-49 2-35 (129)
172 3ttc_A HYPF, transcriptional r 59.6 43 0.0015 27.3 7.9 41 35-80 583-623 (657)
173 3kbq_A Protein TA0487; structu 59.5 8.4 0.00029 26.0 3.3 41 34-81 47-89 (172)
174 2v7y_A Chaperone protein DNAK; 59.5 5.4 0.00019 30.9 2.6 36 72-108 86-121 (509)
175 1kz1_A 6,7-dimethyl-8-ribityll 59.2 18 0.0006 24.3 4.8 46 32-78 28-74 (159)
176 3nwp_A 6-phosphogluconolactona 58.8 16 0.00054 25.6 4.7 45 29-78 15-59 (233)
177 3kjj_A NMB1025 protein; YJGF p 58.7 30 0.001 21.9 5.7 49 34-82 45-94 (128)
178 4ddo_A 3-oxoacyl-[acyl-carrier 58.4 8.2 0.00028 29.5 3.4 44 38-81 309-354 (451)
179 1qah_A Perchloric acid soluble 57.9 23 0.00077 22.6 5.1 53 33-85 51-104 (136)
180 3l7q_A Putative translation in 57.7 20 0.0007 22.4 4.7 52 34-85 48-100 (125)
181 1zc6_A Probable N-acetylglucos 57.2 7.8 0.00027 27.6 3.0 62 32-98 228-291 (305)
182 3qvl_A Putative hydantoin race 57.0 30 0.001 24.3 6.0 40 35-81 158-197 (245)
183 3k0t_A Endoribonuclease L-PSP, 56.8 19 0.00064 23.3 4.5 52 34-85 66-118 (143)
184 3tx2_A Probable 6-phosphogluco 56.6 14 0.00046 26.2 4.1 47 27-78 15-61 (251)
185 2qo3_A Eryaii erythromycin pol 56.2 10 0.00036 31.8 3.9 46 36-81 285-332 (915)
186 3lhi_A Putative 6-phosphogluco 56.1 17 0.00059 25.3 4.5 46 28-78 11-56 (232)
187 3ico_A 6PGL, 6-phosphogluconol 55.3 13 0.00043 26.7 3.8 48 26-78 30-77 (268)
188 3oc6_A 6-phosphogluconolactona 55.0 13 0.00045 26.2 3.8 46 27-77 15-60 (248)
189 1pf5_A Hypothetical protein YJ 54.1 38 0.0013 21.2 5.6 48 34-81 51-100 (131)
190 3o04_A LMO2201 protein, beta-k 54.0 31 0.0011 25.7 5.9 42 23-65 63-108 (413)
191 3n7t_A Macrophage binding prot 53.8 5.3 0.00018 28.4 1.5 41 50-90 99-145 (247)
192 3ist_A Glutamate racemase; str 53.8 23 0.00078 25.4 5.0 38 40-81 164-201 (269)
193 1zbs_A Hypothetical protein PG 53.5 4.9 0.00017 28.6 1.3 47 30-79 210-259 (291)
194 2v4w_A Hydroxymethylglutaryl-C 53.4 15 0.00052 28.5 4.2 47 35-81 54-102 (460)
195 3uhf_A Glutamate racemase; str 53.1 25 0.00087 25.3 5.1 36 40-81 184-219 (274)
196 3kkl_A Probable chaperone prot 52.8 5.3 0.00018 28.2 1.4 41 50-90 92-138 (244)
197 2iik_A 3-ketoacyl-COA thiolase 52.3 10 0.00034 28.7 3.0 26 37-62 57-82 (418)
198 2ig8_A Hypothetical protein PA 51.9 44 0.0015 21.3 5.8 48 33-80 54-102 (144)
199 3dnf_A ISPH, LYTB, 4-hydroxy-3 51.9 49 0.0017 24.4 6.5 64 13-79 157-234 (297)
200 3i3f_A Hypothetical protein; s 51.5 39 0.0013 21.6 5.4 49 33-81 58-110 (141)
201 2c92_A 6,7-dimethyl-8-ribityll 50.9 13 0.00044 25.0 3.0 46 32-80 28-73 (160)
202 3ven_A O-carbamoyltransferase 50.9 12 0.0004 30.1 3.2 25 41-65 54-78 (576)
203 1afw_A 3-ketoacetyl-COA thiola 50.9 12 0.00042 28.0 3.2 30 39-68 295-324 (393)
204 2iik_A 3-ketoacyl-COA thiolase 50.6 10 0.00035 28.7 2.8 28 40-67 316-343 (418)
205 2dwu_A Glutamate racemase; iso 50.5 22 0.00074 25.3 4.4 25 55-81 179-203 (276)
206 4e1l_A Acetoacetyl-COA thiolas 50.5 14 0.00047 27.5 3.5 25 39-63 296-320 (395)
207 1tqy_B Actinorhodin polyketide 50.2 41 0.0014 25.1 6.1 33 33-65 77-113 (415)
208 1ulq_A Putative acetyl-COA ace 50.1 14 0.00048 27.6 3.5 29 39-67 298-326 (401)
209 3vcz_A Endoribonuclease L-PSP; 50.0 43 0.0015 21.8 5.5 51 33-83 71-122 (153)
210 1dkg_D Molecular chaperone DNA 49.1 11 0.00037 27.6 2.6 36 72-108 112-147 (383)
211 2d3m_A Pentaketide chromone sy 49.1 22 0.00075 26.6 4.4 42 35-80 288-333 (406)
212 2vu1_A Acetyl-COA acetyltransf 49.1 13 0.00045 27.6 3.1 26 39-64 292-317 (392)
213 2jfz_A Glutamate racemase; cel 49.0 29 0.00098 24.3 4.8 38 39-81 159-196 (255)
214 3k12_A Uncharacterized protein 49.0 32 0.0011 21.4 4.6 49 33-81 36-85 (122)
215 1vhq_A Enhancing lycopene bios 48.9 6.8 0.00023 27.0 1.4 38 52-89 86-139 (232)
216 2hg4_A DEBS, 6-deoxyerythronol 48.5 15 0.0005 31.0 3.6 46 36-81 307-354 (917)
217 3eb9_A 6-phosphogluconolactona 48.4 16 0.00056 26.0 3.5 45 28-77 13-57 (266)
218 2vu1_A Acetyl-COA acetyltransf 48.3 29 0.00098 25.7 4.9 44 38-81 30-75 (392)
219 3en9_A Glycoprotease, O-sialog 47.6 44 0.0015 25.9 6.1 41 35-80 232-272 (540)
220 1wl4_A Acetyl-coenzyme A acety 47.6 14 0.00049 27.5 3.1 27 39-65 297-323 (397)
221 1wdk_C 3-ketoacyl-COA thiolase 47.5 14 0.00049 27.4 3.1 29 39-67 287-315 (390)
222 2wu9_A 3-ketoacyl-COA thiolase 47.4 22 0.00074 27.2 4.2 42 38-80 58-103 (442)
223 3goa_A 3-ketoacyl-COA thiolase 47.4 15 0.0005 27.5 3.1 29 40-68 285-313 (387)
224 3ss6_A Acetyl-COA acetyltransf 46.9 15 0.00051 27.4 3.1 26 39-64 294-319 (394)
225 1wl4_A Acetyl-coenzyme A acety 46.7 16 0.00055 27.2 3.3 45 37-81 32-78 (397)
226 3qbx_A Anhydro-N-acetylmuramic 46.7 35 0.0012 25.9 5.1 42 23-64 54-95 (371)
227 3svk_A Acetyl-COA acetyltransf 46.2 15 0.00053 27.6 3.1 30 40-69 308-337 (407)
228 3hn6_A Glucosamine-6-phosphate 46.2 40 0.0014 24.4 5.3 46 29-78 31-76 (289)
229 2ib8_A Acetyl-COA acetyltransf 45.7 13 0.00045 27.6 2.7 24 39-62 297-320 (395)
230 2wu9_A 3-ketoacyl-COA thiolase 45.6 18 0.00063 27.6 3.5 31 39-69 317-347 (442)
231 2gqd_A 3-oxoacyl-[acyl-carrier 45.5 50 0.0017 24.9 5.9 34 32-65 95-132 (437)
232 2ib8_A Acetyl-COA acetyltransf 45.4 34 0.0012 25.3 4.9 43 38-81 35-80 (395)
233 4hcj_A THIJ/PFPI domain protei 45.3 8.8 0.0003 25.7 1.5 30 52-81 65-99 (177)
234 3l18_A Intracellular protease 45.2 8.6 0.00029 24.8 1.4 28 54-81 61-93 (168)
235 1wdk_C 3-ketoacyl-COA thiolase 43.9 18 0.0006 26.9 3.1 43 38-80 33-79 (390)
236 2vvt_A Glutamate racemase; iso 43.7 42 0.0014 24.0 5.1 39 39-81 182-220 (290)
237 1e5m_A KAS II, beta ketoacyl a 43.5 56 0.0019 24.3 5.9 41 22-63 65-109 (416)
238 1c41_A Lumazine synthase; ribo 49.4 5 0.00017 28.1 0.0 53 22-78 19-71 (200)
239 4dd5_A Acetyl-COA acetyltransf 43.1 20 0.00068 26.7 3.3 26 39-64 297-322 (396)
240 4ddo_A 3-oxoacyl-[acyl-carrier 42.2 43 0.0015 25.4 5.1 52 23-75 91-147 (451)
241 1n57_A Chaperone HSP31, protei 42.2 13 0.00044 26.8 2.1 38 53-90 142-185 (291)
242 1rw7_A YDR533CP; alpha-beta sa 41.5 11 0.00039 26.1 1.7 34 52-85 94-133 (243)
243 2w6k_A COBE; biosynthetic prot 41.4 71 0.0024 20.7 6.0 43 37-79 25-67 (145)
244 1rvv_A Riboflavin synthase; tr 41.0 66 0.0022 21.3 5.3 46 32-78 23-68 (154)
245 1afw_A 3-ketoacetyl-COA thiola 40.6 45 0.0015 24.8 5.0 43 39-81 39-87 (393)
246 1u9c_A APC35852; structural ge 40.4 12 0.0004 25.4 1.5 32 54-85 87-124 (224)
247 3hhd_A Fatty acid synthase; tr 40.0 22 0.00076 30.1 3.4 44 38-81 270-315 (965)
248 2vrn_A Protease I, DR1199; cys 40.0 12 0.00042 24.6 1.6 28 54-81 73-106 (190)
249 3l3b_A ES1 family protein; ssg 39.7 8.9 0.0003 27.1 0.8 32 51-82 102-150 (242)
250 1ox0_A Beta ketoacyl-acyl carr 39.2 79 0.0027 23.7 6.2 27 33-59 91-117 (430)
251 3cqy_A Anhydro-N-acetylmuramic 39.0 36 0.0012 25.8 4.2 43 22-64 57-99 (370)
252 3sqz_A Putative hydroxymethylg 38.9 45 0.0015 25.4 4.8 36 33-68 237-272 (425)
253 3vth_A Hydrogenase maturation 38.6 52 0.0018 27.3 5.3 40 36-80 678-717 (761)
254 1hqk_A 6,7-dimethyl-8-ribityll 38.2 67 0.0023 21.2 5.0 46 32-78 23-68 (154)
255 1di0_A Lumazine synthase; tran 37.8 50 0.0017 21.9 4.3 46 32-78 21-66 (158)
256 1tqy_A Beta-ketoacyl synthase/ 37.7 63 0.0022 24.1 5.4 36 23-59 62-97 (424)
257 3v4n_A HMG-COA synthase; hydro 37.6 54 0.0018 24.5 5.0 31 34-64 209-239 (388)
258 3ho9_A 3-oxoacyl-[acyl-carrier 37.6 79 0.0027 23.6 5.9 36 23-59 77-112 (427)
259 2oho_A Glutamate racemase; iso 37.1 66 0.0023 22.6 5.2 38 39-81 170-207 (273)
260 1jlj_A Gephyrin; globular alph 37.0 16 0.00056 24.7 1.8 42 34-80 61-104 (189)
261 2f82_A HMG-COA synthase; HMGS1 37.0 45 0.0016 25.3 4.5 33 38-70 215-253 (450)
262 2fex_A Conserved hypothetical 36.5 12 0.0004 24.8 1.0 29 53-81 60-92 (188)
263 3lma_A Stage V sporulation pro 36.3 27 0.00093 26.3 3.1 24 39-62 209-232 (347)
264 1q1v_A DEK protein; winged-hel 36.2 32 0.0011 19.8 2.7 40 37-88 15-54 (70)
265 2pjk_A 178AA long hypothetical 35.8 13 0.00044 25.0 1.1 41 35-80 65-107 (178)
266 3lme_A Possible translation in 35.7 38 0.0013 21.6 3.4 48 35-82 51-100 (138)
267 2gzm_A Glutamate racemase; enz 35.6 52 0.0018 23.1 4.4 24 56-81 176-199 (267)
268 4ewg_A Beta-ketoacyl synthase; 35.1 81 0.0028 23.4 5.6 46 22-68 65-115 (412)
269 3en9_A Glycoprotease, O-sialog 35.0 33 0.0011 26.7 3.5 39 33-73 51-89 (540)
270 3eph_A TRNA isopentenyltransfe 34.5 48 0.0016 25.4 4.2 44 19-78 67-110 (409)
271 1j3n_A 3-oxoacyl-(acyl-carrier 34.2 75 0.0026 23.5 5.3 37 22-59 59-95 (408)
272 1c2y_A Protein (lumazine synth 34.0 90 0.0031 20.7 5.1 46 32-79 24-69 (156)
273 1uuy_A CNX1, molybdopterin bio 33.9 21 0.00073 23.4 2.0 42 34-80 54-97 (167)
274 3out_A Glutamate racemase; str 33.8 77 0.0026 22.5 5.1 34 41-78 165-198 (268)
275 2cxn_A Glucose-6-phosphate iso 33.1 58 0.002 26.0 4.6 38 33-70 123-164 (557)
276 3cne_A Putative protease I; st 33.0 12 0.00041 24.3 0.6 29 53-81 63-102 (175)
277 1sbx_A SKI oncogene, C-SKI; wi 32.3 21 0.00071 22.4 1.6 17 21-37 89-105 (106)
278 3pzy_A MOG; ssgcid, seattle st 32.1 20 0.00069 23.6 1.6 38 37-80 53-92 (164)
279 2e1z_A Propionate kinase; TDCD 31.7 43 0.0015 25.9 3.6 26 55-80 329-355 (415)
280 1zuw_A Glutamate racemase 1; ( 31.6 99 0.0034 21.8 5.4 24 56-81 177-200 (272)
281 2jfq_A Glutamate racemase; cel 31.5 90 0.0031 22.2 5.2 38 40-81 182-219 (286)
282 2wu8_A Glucose-6-phosphate iso 31.4 72 0.0024 25.5 4.9 39 32-70 116-158 (549)
283 2jfn_A Glutamate racemase; cel 31.3 52 0.0018 23.4 3.8 25 55-81 195-219 (285)
284 2pbq_A Molybdenum cofactor bio 31.2 27 0.00092 23.3 2.1 44 32-80 49-94 (178)
285 2obx_A DMRL synthase 1, 6,7-di 31.1 64 0.0022 21.4 4.0 47 32-79 22-68 (157)
286 4egv_A Acetyl-COA acetyltransf 31.1 32 0.0011 26.9 2.9 28 38-65 318-345 (520)
287 2x3e_A 3-oxoacyl-[acyl-carrier 30.8 80 0.0027 22.5 4.8 45 35-81 53-99 (331)
288 2rk3_A Protein DJ-1; parkinson 30.7 14 0.00047 24.6 0.6 29 53-81 63-97 (197)
289 1ew4_A CYAY protein; friedreic 30.5 24 0.00082 21.9 1.7 23 23-45 1-23 (106)
290 3djc_A Type III pantothenate k 30.3 96 0.0033 22.0 5.1 38 40-80 41-82 (266)
291 1saz_A Probable butyrate kinas 30.3 52 0.0018 24.4 3.8 47 34-80 272-320 (381)
292 2o2c_A GPI, glucose-6-phosphat 30.2 78 0.0027 25.7 5.0 38 33-70 171-212 (613)
293 3szu_A ISPH, 4-hydroxy-3-methy 30.2 40 0.0014 25.2 3.1 63 14-79 172-250 (328)
294 3eq5_A SKI-like protein; TGF-b 29.8 24 0.00082 22.8 1.6 16 21-36 106-121 (125)
295 3efe_A THIJ/PFPI family protei 29.7 18 0.0006 24.6 1.0 29 53-81 71-103 (212)
296 3kzu_A 3-oxoacyl-(acyl-carrier 29.5 95 0.0033 23.3 5.2 36 22-58 75-111 (428)
297 1oi4_A Hypothetical protein YH 29.3 22 0.00074 23.6 1.4 28 54-81 84-116 (193)
298 2i2c_A Probable inorganic poly 29.3 61 0.0021 22.8 3.9 40 38-77 15-56 (272)
299 1t10_A GPI, glucose-6-phosphat 28.9 80 0.0027 25.5 4.8 38 33-70 170-211 (605)
300 4g9i_A Hydrogenase maturation 28.8 62 0.0021 26.8 4.3 37 39-80 693-729 (772)
301 2h3g_X Biosynthetic protein; p 28.7 1.1E+02 0.0039 21.6 5.3 35 40-77 40-74 (268)
302 2is8_A Molybdopterin biosynthe 28.4 32 0.0011 22.4 2.1 42 34-80 45-88 (164)
303 3ezw_A Glycerol kinase; glycer 28.3 61 0.0021 25.0 4.0 32 33-64 50-81 (526)
304 2e8b_A Probable molybdopterin- 27.9 68 0.0023 21.1 3.8 15 56-70 14-29 (201)
305 1gzs_B SOPE; toxin/cell cycle, 27.9 1.3E+02 0.0046 19.8 6.5 41 39-79 65-105 (165)
306 3exa_A TRNA delta(2)-isopenten 27.7 66 0.0023 23.9 3.9 36 19-68 68-103 (322)
307 2g2c_A Putative molybdenum cof 27.6 33 0.0011 22.5 2.1 41 34-80 53-95 (167)
308 3mqd_A Beta-ketoacyl synthase; 27.4 57 0.0019 24.5 3.6 30 34-63 91-124 (428)
309 4ham_A LMO2241 protein; struct 27.0 71 0.0024 19.8 3.5 35 34-80 14-48 (134)
310 3h38_A TRNA nucleotidyl transf 26.9 56 0.0019 25.2 3.5 37 29-76 12-48 (441)
311 3d01_A Uncharacterized protein 26.5 1.1E+02 0.0039 19.9 4.6 55 24-82 69-135 (165)
312 2dzr_A General transcription f 26.4 35 0.0012 21.1 1.8 17 65-81 1-17 (99)
313 3fse_A Two-domain protein cont 26.1 29 0.00098 26.1 1.7 28 54-81 71-103 (365)
314 4e08_A DJ-1 beta; flavodoxin-l 25.9 16 0.00056 24.1 0.3 28 54-81 65-98 (190)
315 2vba_A 3-oxoacyl-[acyl-carrier 25.9 69 0.0024 23.8 3.8 36 23-59 60-95 (406)
316 2e2o_A Hexokinase; acetate and 25.7 1.7E+02 0.0057 20.3 6.6 26 56-81 239-264 (299)
317 3khy_A Propionate kinase; csgi 25.6 66 0.0023 24.5 3.6 26 55-80 312-338 (384)
318 1vl1_A 6PGL, 6-phosphogluconol 25.4 51 0.0018 22.9 2.8 42 31-77 25-66 (232)
319 1y5e_A Molybdenum cofactor bio 25.3 37 0.0013 22.3 2.0 40 36-80 57-98 (169)
320 4h0p_A Acetate kinase; askha ( 25.2 1.1E+02 0.0036 23.9 4.7 28 53-80 349-377 (438)
321 3ot1_A 4-methyl-5(B-hydroxyeth 25.2 21 0.0007 24.1 0.7 28 54-81 69-102 (208)
322 3d54_D Phosphoribosylformylgly 25.1 21 0.00072 23.7 0.7 27 54-80 39-76 (213)
323 4ijn_A Acetate kinase, acetoki 24.8 24 0.00082 27.1 1.1 26 55-80 322-348 (398)
324 2otm_A Hypothetical protein; s 24.8 91 0.0031 20.2 3.8 46 36-81 69-125 (154)
325 2v4w_A Hydroxymethylglutaryl-C 24.2 1.3E+02 0.0044 23.3 5.1 38 32-69 218-259 (460)
326 3a5r_A Benzalacetone synthase; 24.2 1.4E+02 0.0048 21.9 5.2 42 35-80 271-313 (387)
327 3rfq_A Pterin-4-alpha-carbinol 23.9 43 0.0015 22.6 2.1 39 36-80 75-115 (185)
328 3foz_A TRNA delta(2)-isopenten 23.7 74 0.0025 23.5 3.5 34 20-67 76-109 (316)
329 3f5d_A Protein YDEA; unknow pr 23.7 27 0.00094 23.6 1.1 27 55-81 62-91 (206)
330 2bye_A Phospholipase C, epsilo 23.7 58 0.002 20.5 2.5 26 39-64 34-59 (110)
331 3aj3_A MLR6805 protein, 4-pyri 23.6 44 0.0015 22.8 2.2 29 42-70 74-109 (274)
332 3r8e_A Hypothetical sugar kina 23.5 71 0.0024 22.7 3.4 47 33-80 238-285 (321)
333 2ab0_A YAJL; DJ-1/THIJ superfa 23.4 21 0.00072 23.9 0.5 28 54-81 64-97 (205)
334 4htl_A Beta-glucoside kinase; 23.2 92 0.0032 21.9 3.9 48 33-81 215-262 (297)
335 3ttv_A Catalase HPII; heme ori 23.1 52 0.0018 27.4 2.8 29 54-82 659-691 (753)
336 1p9e_A Methyl parathion hydrol 23.0 45 0.0015 23.9 2.2 21 43-63 126-146 (331)
337 2ed2_A General transcription f 23.0 44 0.0015 20.7 1.8 17 65-81 1-17 (99)
338 1i88_A CHS2, chalcone synthase 22.9 1.9E+02 0.0064 21.2 5.7 42 35-80 275-317 (389)
339 2r2d_A AGR_PTI_140P, Zn-depend 22.7 48 0.0016 22.6 2.2 29 42-70 89-124 (276)
340 2wya_A Hydroxymethylglutaryl-C 22.6 95 0.0032 23.6 4.1 40 29-68 219-258 (460)
341 2iir_A Acetate kinase; transfe 22.4 1.6E+02 0.0054 22.6 5.2 26 56-81 322-348 (403)
342 3gra_A Transcriptional regulat 22.1 30 0.001 23.2 1.1 28 54-81 69-99 (202)
343 1mkz_A Molybdenum cofactor bio 21.9 42 0.0015 22.1 1.8 41 35-80 53-95 (172)
344 1b73_A Glutamate racemase; iso 21.8 72 0.0025 22.1 3.1 23 57-81 171-193 (254)
345 2ix4_A 3-oxoacyl-[acyl-carrier 21.7 1.4E+02 0.0049 22.3 4.9 27 32-58 85-112 (431)
346 1vp8_A Hypothetical protein AF 21.6 92 0.0032 21.6 3.5 19 48-68 151-169 (201)
347 2d99_A Muscle, general transcr 21.5 49 0.0017 20.1 1.8 17 65-81 1-17 (90)
348 1fs5_A Glucosamine-6-phosphate 21.2 1.9E+02 0.0067 19.9 5.3 21 57-77 34-54 (266)
349 4db3_A Glcnac kinase, N-acetyl 21.1 93 0.0032 22.2 3.6 46 34-80 248-293 (327)
350 2p0u_A Stilbenecarboxylate syn 21.0 1.7E+02 0.0056 21.8 5.1 41 36-80 294-335 (413)
351 3iwt_A 178AA long hypothetical 21.0 78 0.0027 20.6 3.0 26 55-80 80-107 (178)
352 2eq5_A 228AA long hypothetical 20.9 1.6E+02 0.0055 19.6 4.7 23 56-80 174-198 (228)
353 2iwz_A 3-oxoacyl-[acyl-carrier 20.9 1.3E+02 0.0045 22.5 4.6 35 23-58 86-121 (438)
354 3vgl_A Glucokinase; ROK family 20.7 87 0.003 22.2 3.4 46 34-80 231-277 (321)
355 1ee0_A 2-pyrone synthase; poly 20.7 1.5E+02 0.0051 21.9 4.8 42 35-80 280-322 (402)
356 1di6_A MOGA, molybdenum cofact 20.4 47 0.0016 22.6 1.8 41 35-80 50-92 (195)
357 1h7e_A 3-deoxy-manno-octuloson 20.4 39 0.0013 22.7 1.4 14 57-70 3-17 (245)
358 1ne7_A Glucosamine-6-phosphate 20.3 1.3E+02 0.0044 21.3 4.2 23 56-78 33-55 (289)
359 3h3n_X Glycerol kinase; ATP-bi 20.2 1.2E+02 0.0042 23.1 4.3 33 32-64 50-82 (506)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.63 E-value=1.3e-16 Score=128.35 Aligned_cols=85 Identities=31% Similarity=0.431 Sum_probs=77.2
Q ss_pred cCccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhh
Q psy13580 18 EPQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYL 92 (109)
Q Consensus 18 ~~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~l 92 (109)
++..++||++||+++.++++++.++++++|+++++++.+|+.|+||||+||+|.||+.|+++|+. ..|..+++.
T Consensus 295 ~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~- 373 (605)
T 4b9q_A 295 HMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAI- 373 (605)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHH-
T ss_pred eEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHH-
Confidence 35568999999999999999999999999999999999999999999999999999999999942 246688998
Q ss_pred ccchhheeecc
Q psy13580 93 GKKVTHAVVTV 103 (109)
Q Consensus 93 Gaai~~a~lt~ 103 (109)
||++++++++.
T Consensus 374 GAai~a~~l~~ 384 (605)
T 4b9q_A 374 GAAVQGGVLTG 384 (605)
T ss_dssp HHHHHHHHHHT
T ss_pred hHHHHHHHhcC
Confidence 99999997764
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.61 E-value=2.2e-16 Score=128.72 Aligned_cols=84 Identities=26% Similarity=0.325 Sum_probs=76.7
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhc
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLG 93 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lG 93 (109)
+..+|||++|++++.++++++.++++++|+++++++++|+.|+||||+||+|.|++.|+++|+. ..|..+++. |
T Consensus 297 ~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~-G 375 (675)
T 3d2f_A 297 VSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAK-G 375 (675)
T ss_dssp EEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHH-H
T ss_pred EEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHH-H
Confidence 3568999999999999999999999999999999999999999999999999999999999952 246788998 9
Q ss_pred cchhheeecc
Q psy13580 94 KKVTHAVVTV 103 (109)
Q Consensus 94 aai~~a~lt~ 103 (109)
|++++++++.
T Consensus 376 Aa~~a~~ls~ 385 (675)
T 3d2f_A 376 AAFICAIHSP 385 (675)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHHHhCC
Confidence 9999998864
No 3
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.60 E-value=8.4e-16 Score=117.43 Aligned_cols=85 Identities=15% Similarity=0.230 Sum_probs=75.9
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhccc-------------ch
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK-------------MK 85 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~-------------~~ 85 (109)
...++||++|+++++++++++.++++++|+++++.+.+|+.|+||||+|++|.|++.+++.|+.. .|
T Consensus 307 ~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p 386 (409)
T 4gni_A 307 FASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNP 386 (409)
T ss_dssp EEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCT
T ss_pred eEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCH
Confidence 35679999999999999999999999999999999999999999999999999999999999643 35
Q ss_pred hHHHhhhccchhheeeccc
Q psy13580 86 ETAEAYLGKKVTHAVVTVP 104 (109)
Q Consensus 86 ~~a~a~lGaai~~a~lt~p 104 (109)
..+++. ||+++++....+
T Consensus 387 ~~ava~-GAa~~~~~~~~~ 404 (409)
T 4gni_A 387 SELQAR-GAALQASLIQEH 404 (409)
T ss_dssp TTHHHH-HHHHHHHHHHC-
T ss_pred HHHHHH-HHHHHhhhhhhh
Confidence 678887 999998865443
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.58 E-value=1.1e-15 Score=121.87 Aligned_cols=84 Identities=38% Similarity=0.544 Sum_probs=76.6
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhccc------chhHHHhhh
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK------MKETAEAYL 92 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~------~~~~a~a~l 92 (109)
+...+||++||+++.++++++.++++++|+++++++++|+.|+||||+|++|.|++.|++.|++. .|..+++.
T Consensus 293 ~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~- 371 (554)
T 1yuw_A 293 FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAY- 371 (554)
T ss_dssp EEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHH-
T ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHH-
Confidence 34579999999999999999999999999999999999999999999999999999999999633 46678998
Q ss_pred ccchhheeecc
Q psy13580 93 GKKVTHAVVTV 103 (109)
Q Consensus 93 Gaai~~a~lt~ 103 (109)
||+++++.++.
T Consensus 372 Gaa~~a~~l~~ 382 (554)
T 1yuw_A 372 GAAVQAAILSG 382 (554)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHhcC
Confidence 99999988765
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.58 E-value=1.2e-15 Score=116.09 Aligned_cols=83 Identities=40% Similarity=0.554 Sum_probs=75.5
Q ss_pred ccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhccc------chhHHHhhhc
Q psy13580 20 QPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK------MKETAEAYLG 93 (109)
Q Consensus 20 ~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~------~~~~a~a~lG 93 (109)
...+||++|++++.++++++.++++++|+++++.+.+|+.|+||||+|++|.|++.|++.|++. .|..+++. |
T Consensus 315 ~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~-G 393 (404)
T 3i33_A 315 YTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAY-G 393 (404)
T ss_dssp EEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHH-H
T ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHH-H
Confidence 4578999999999999999999999999999999999999999999999999999999999533 46678887 9
Q ss_pred cchhheeecc
Q psy13580 94 KKVTHAVVTV 103 (109)
Q Consensus 94 aai~~a~lt~ 103 (109)
|+++++.++.
T Consensus 394 aa~~a~~l~~ 403 (404)
T 3i33_A 394 AAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhcC
Confidence 9999988763
No 6
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.57 E-value=2.4e-16 Score=126.93 Aligned_cols=84 Identities=31% Similarity=0.434 Sum_probs=76.6
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhc
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLG 93 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lG 93 (109)
+..++||++|++++.|+++++.++++++|+++++.+.+|+.|+||||+|++|.|++.|+++|+. ..|..+++. |
T Consensus 296 ~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~-G 374 (605)
T 2kho_A 296 MNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAI-G 374 (605)
T ss_dssp EEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHH-H
T ss_pred EEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHH-H
Confidence 4458999999999999999999999999999999999999999999999999999999999952 246788998 9
Q ss_pred cchhheeecc
Q psy13580 94 KKVTHAVVTV 103 (109)
Q Consensus 94 aai~~a~lt~ 103 (109)
|++++++++.
T Consensus 375 Aa~~a~~l~~ 384 (605)
T 2kho_A 375 AAVQGGVLTG 384 (605)
T ss_dssp HHHHHTTTTT
T ss_pred HHHHHHHhcC
Confidence 9999998764
No 7
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.57 E-value=1.4e-15 Score=120.04 Aligned_cols=84 Identities=27% Similarity=0.391 Sum_probs=76.0
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhc
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLG 93 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lG 93 (109)
...++||++|+++++|+++++.++++++|+++++.+++|+.|+||||+|++|.|++.|++.|+. ..|..+++. |
T Consensus 265 ~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~-G 343 (509)
T 2v7y_A 265 LEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAI-G 343 (509)
T ss_dssp EEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHH-H
T ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHh-h
Confidence 3458999999999999999999999999999999999999999999999999999999999952 246788997 9
Q ss_pred cchhheeecc
Q psy13580 94 KKVTHAVVTV 103 (109)
Q Consensus 94 aai~~a~lt~ 103 (109)
|+++++.++.
T Consensus 344 aa~~a~~l~~ 353 (509)
T 2v7y_A 344 AAIQGGVIAG 353 (509)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999987753
No 8
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.55 E-value=5.1e-15 Score=111.97 Aligned_cols=82 Identities=32% Similarity=0.462 Sum_probs=74.4
Q ss_pred ccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhcc
Q psy13580 20 QPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLGK 94 (109)
Q Consensus 20 ~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lGa 94 (109)
..++||++|+++++++++++.+.++++|+++++.+.+++.|+|+||+|++|.|++.|++.|+. ..|..+++. |+
T Consensus 297 ~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~-Ga 375 (383)
T 1dkg_D 297 NIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAI-GA 375 (383)
T ss_dssp EEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHH-HH
T ss_pred EEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHH-HH
Confidence 348999999999999999999999999999999999999999999999999999999999952 246678887 99
Q ss_pred chhheeec
Q psy13580 95 KVTHAVVT 102 (109)
Q Consensus 95 ai~~a~lt 102 (109)
+++++.++
T Consensus 376 a~~a~~l~ 383 (383)
T 1dkg_D 376 AVQGGVLT 383 (383)
T ss_dssp HHHTTTTC
T ss_pred HHHHHhhC
Confidence 99998764
No 9
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.55 E-value=3.5e-15 Score=112.79 Aligned_cols=83 Identities=42% Similarity=0.590 Sum_probs=75.1
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhccc------chhHHHhhh
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSK------MKETAEAYL 92 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~------~~~~a~a~l 92 (109)
....+||++|++++.++++++.++++++|+++++++.+|+.|+|+||+|++|.|++.|++.|++. .|..+++.
T Consensus 306 ~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~- 384 (394)
T 3qfu_A 306 LSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAY- 384 (394)
T ss_dssp EEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHH-
T ss_pred eEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHH-
Confidence 34578999999999999999999999999999999999999999999999999999999999533 46678887
Q ss_pred ccchhheeec
Q psy13580 93 GKKVTHAVVT 102 (109)
Q Consensus 93 Gaai~~a~lt 102 (109)
||+++++.++
T Consensus 385 Gaa~~a~~ls 394 (394)
T 3qfu_A 385 GAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999998754
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.21 E-value=4.7e-12 Score=94.51 Aligned_cols=82 Identities=16% Similarity=0.113 Sum_probs=69.1
Q ss_pred ccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCC--cccc-cEEEEecCccccchhhHHHHHHhcc-----cchhHHHhh
Q psy13580 20 QPSTSPEPREEINHASGLNGAGALTIVLEDADMN--KKDV-DEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAY 91 (109)
Q Consensus 20 ~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~--~~~I-~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~ 91 (109)
..++||++|++++++.++++.+.++++|++++.+ .+.+ +.|+|+||+|++|.+++.|++.|+. ..|..+++.
T Consensus 238 ~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~ 317 (344)
T 1jce_A 238 KLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAK 317 (344)
T ss_dssp EEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHH
T ss_pred eEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHH
Confidence 4579999999999999999999999999998643 2334 7899999999999999999999953 246678887
Q ss_pred hccchhheeec
Q psy13580 92 LGKKVTHAVVT 102 (109)
Q Consensus 92 lGaai~~a~lt 102 (109)
|++++++.++
T Consensus 318 -Gaa~~a~~~~ 327 (344)
T 1jce_A 318 -GAGMVLDKVN 327 (344)
T ss_dssp -HHHHGGGCHH
T ss_pred -HHHHHHhChH
Confidence 9998887543
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.84 E-value=6.8e-09 Score=74.81 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=60.5
Q ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhccchhh
Q psy13580 24 SPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLGKKVTH 98 (109)
Q Consensus 24 tr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lGaai~~ 98 (109)
+++++++++.+.++++.+.+.+.+++.+ +++.|+|+||++++|.+++.+++.|+. ..|..+.+. |+++++
T Consensus 198 ~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~-Gaal~a 272 (272)
T 3h1q_A 198 RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPL-GIALFG 272 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHH-HHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHH-HHHhcC
Confidence 7899999999999999999999998765 478999999999999999999999952 345677886 888764
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.83 E-value=5.7e-09 Score=80.84 Aligned_cols=61 Identities=21% Similarity=0.318 Sum_probs=54.8
Q ss_pred cccCHHHHHHHhHHHHHHHHHHHHHHHHhcCC------CcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 21 PSTSPEPREEINHASGLNGAGALTIVLEDADM------NKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 21 ~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~------~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.+++|++|++++++.++++.+.+++.|++++. ....++.|+|+||+|++|.+++.+++.|+
T Consensus 287 ~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g 353 (419)
T 4a2a_A 287 KTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK 353 (419)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT
T ss_pred eEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC
Confidence 56899999999999999999999999999998 35678999999999999999999999994
No 13
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.67 E-value=2.3e-08 Score=75.12 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=49.2
Q ss_pred cccCHHHHHHHhHHHHHHHHHHHHHHHHh--cCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 21 PSTSPEPREEINHASGLNGAGALTIVLED--ADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 21 ~~itr~~fe~l~~~~~~~~~~~v~~~l~~--a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..++|++|++++++.++++.+.+++.|+. ++.....++.|+|+||++++|.+++.+++.|+
T Consensus 269 ~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 269 ERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 37899999999999999999999999985 46777899999999999999999999999994
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.27 E-value=5.9e-07 Score=67.61 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=51.4
Q ss_pred ccCHHHH-HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc
Q psy13580 22 STSPEPR-EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS 82 (109)
Q Consensus 22 ~itr~~f-e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~ 82 (109)
.++++++ +++++++++++.+.++++|+++ .++++.|+|+||++++ +++.+++.|+.
T Consensus 264 ~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~ 320 (346)
T 2fsj_A 264 QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPG 320 (346)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcC
Confidence 4679999 9999999999999999999887 6789999999999999 99999999953
No 15
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.23 E-value=7.5e-07 Score=64.49 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=46.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc-----cchhHHHhhhccchhhe
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-----KMKETAEAYLGKKVTHA 99 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~-----~~~~~a~a~lGaai~~a 99 (109)
++++..+.+.+.+.+.....+ ..+++.|+++||.+++|.||+.+++.|+. ..|..+.+. |||+++.
T Consensus 183 ~di~a~~~~~v~~~l~~~~~~----~~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~-GAAl~A~ 253 (276)
T 4ehu_A 183 EDIVAGIHTSVAKRVSSLVKR----IGVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGAL-GAALYAF 253 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HCCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh----cccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHH-HHHHHHH
Confidence 445555555555544444333 35678899999999999999999999942 125667776 9998863
No 16
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.91 E-value=2e-05 Score=58.19 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=49.6
Q ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc--------cchhHHHhhhccc
Q psy13580 24 SPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS--------KMKETAEAYLGKK 95 (109)
Q Consensus 24 tr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~--------~~~~~a~a~lGaa 95 (109)
+++++.+++.+.++++.+.+.+.+++ ..+++.|+|+||++++ +++.+++.|+. ..|..+++. |++
T Consensus 244 ~~~~~~~~i~~~~~~~~~~i~~~i~~----~~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~-G~~ 316 (320)
T 2zgy_A 244 KISIVTEAMNEALRKLEQRVLNTLNE----FSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVN-GMY 316 (320)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHH-HHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh----hcCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHH-HHH
Confidence 34566666666666666666666655 2678999999999998 99999999964 135677776 877
Q ss_pred hhh
Q psy13580 96 VTH 98 (109)
Q Consensus 96 i~~ 98 (109)
.++
T Consensus 317 ~~~ 319 (320)
T 2zgy_A 317 LIG 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 643
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=97.68 E-value=3.3e-06 Score=63.83 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=54.1
Q ss_pred cccCHHHHH---HHhHHH-----HHHHHHHHHHHHHhcC--CCcccccEEEEecCccccchhhHHHHHHhcc--------
Q psy13580 21 PSTSPEPRE---EINHAS-----GLNGAGALTIVLEDAD--MNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS-------- 82 (109)
Q Consensus 21 ~~itr~~fe---~l~~~~-----~~~~~~~v~~~l~~a~--~~~~~I~~VilvGGssriP~V~~~l~~~f~~-------- 82 (109)
..+++++|+ .+.+|. ...+.+.+.+++.+.. +.++.++.|+|+||+|++|.++++|++.+..
T Consensus 248 i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v 327 (375)
T 2fxu_A 248 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKI 327 (375)
T ss_dssp EEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCC
T ss_pred EEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeE
Confidence 467888883 333332 2457788888888653 3455678899999999999999999998742
Q ss_pred -----cchhHHHhhhccchhhe
Q psy13580 83 -----KMKETAEAYLGKKVTHA 99 (109)
Q Consensus 83 -----~~~~~a~a~lGaai~~a 99 (109)
.++..++.. |+++.+.
T Consensus 328 ~v~~~~~p~~~~w~-G~si~a~ 348 (375)
T 2fxu_A 328 KIIAPPERKYSVWI-GGSILAS 348 (375)
T ss_dssp CEECCTTTTSHHHH-HHHHHHH
T ss_pred EEEcCCCCCccEEc-chHHhhC
Confidence 123345554 8887776
No 18
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.55 E-value=4e-05 Score=57.98 Aligned_cols=68 Identities=12% Similarity=0.164 Sum_probs=52.8
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccch--hhHHHHHHhcc-cchhHHHhhhccchhhe
Q psy13580 27 PREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPK--VQQLVKEFFNS-KMKETAEAYLGKKVTHA 99 (109)
Q Consensus 27 ~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~--V~~~l~~~f~~-~~~~~a~a~lGaai~~a 99 (109)
.+++.++++++++.+.+++.+.+ ++.++.|+|+||++.++. +++.+++.|+. .+|..+++. |....+.
T Consensus 265 ~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~~~p~~anA~-G~~~~~~ 335 (355)
T 3js6_A 265 EFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKADDSQFSNVR-GYEKLGE 335 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECCSSGGGHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCCCCcHHHHHH-HHHHHHH
Confidence 45666777888888888877764 577899999999999998 88889888854 567778876 7665543
No 19
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=97.52 E-value=2.2e-05 Score=59.90 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=47.4
Q ss_pred ccccCHHHH---HHHhHHH------HHHHHHHHHHHHHhcC--CCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 20 QPSTSPEPR---EEINHAS------GLNGAGALTIVLEDAD--MNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 20 ~~~itr~~f---e~l~~~~------~~~~~~~v~~~l~~a~--~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..++++++| |.+.+|. ...+.+.+.+++.... +.++.++.|+|+||+|++|.+++.|++.+.
T Consensus 268 ~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~ 340 (418)
T 1k8k_A 268 SIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340 (418)
T ss_dssp EEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHH
T ss_pred EEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHH
Confidence 357789999 4443332 2467888888888754 556778999999999999999999988763
No 20
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=97.00 E-value=0.0018 Score=48.13 Aligned_cols=67 Identities=9% Similarity=0.182 Sum_probs=50.0
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc-c----cchhHHHhhhccch
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN-S----KMKETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~-~----~~~~~a~a~lGaai 96 (109)
++.+..++.+++.++++.+.+++. +.+++.++.|+|+||++.+ +.+.+++.|+ . ..|..+++. |...
T Consensus 249 ~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a~-G~~~ 320 (329)
T 4apw_A 249 ESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTCE-GLYK 320 (329)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHHH-HHHH
Confidence 456777788888888887777765 4667778999999999998 5699999996 1 235666665 6543
No 21
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=95.83 E-value=0.0023 Score=48.57 Aligned_cols=60 Identities=25% Similarity=0.205 Sum_probs=42.6
Q ss_pred cccCHHHHHHHhHHHH---------HHHHHHHHHHHHhcCC--CcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 21 PSTSPEPREEINHASG---------LNGAGALTIVLEDADM--NKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 21 ~~itr~~fe~l~~~~~---------~~~~~~v~~~l~~a~~--~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.++++++|+ +.+-+| ..+.+.+.+++.+... .++-.+.|+|+||+|.+|.+.++|++.+.
T Consensus 252 i~i~~erf~-~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~ 322 (394)
T 1k8k_B 252 IKVGGERFE-APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELK 322 (394)
T ss_dssp EEECTHHHH-TGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHH
T ss_pred EEECchhhc-ChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHH
Confidence 567788773 222222 3466777777777643 34556889999999999999999888873
No 22
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.62 E-value=0.026 Score=44.39 Aligned_cols=71 Identities=14% Similarity=0.153 Sum_probs=45.6
Q ss_pred CHHHHHHHhHH-HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccchh
Q psy13580 24 SPEPREEINHA-SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKVT 97 (109)
Q Consensus 24 tr~~fe~l~~~-~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai~ 97 (109)
||.++-+.+-+ +.-++.+.+ +.+++.|. .++.|.++||.++.|.+.+.+.+.++ .++ .++.+. |+|+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg-~pV~~~~~~e~~al-GAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILG-MDVTRPATDEYVAI-GAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHT-SCEEEECCCCHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhC-CceEecCCcccHHH-HHHHH
Confidence 66666443322 222333333 34445554 46789999999999999999999994 433 235555 88887
Q ss_pred hee
Q psy13580 98 HAV 100 (109)
Q Consensus 98 ~a~ 100 (109)
+++
T Consensus 469 A~~ 471 (515)
T 3i8b_A 469 AAW 471 (515)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 23
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.57 E-value=0.025 Score=44.72 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=48.1
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHH---HHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhcc
Q psy13580 23 TSPEPREEINHASGLNGAGALTI---VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGK 94 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~---~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGa 94 (109)
-||.++-++..-+++.+.-.++. .+++.|. .++.|.++||.++-|...+.+.+.| +..+ .++.+. ||
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~~~~e~~al-GA 483 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANAT-GCAMLLPEESEAMLL-GS 483 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEESCSCHHHH-HH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhh-CCeEEecCCCcchHH-HH
Confidence 47777743333444443333333 3444554 5788999999999999999999999 4432 345555 88
Q ss_pred chhheee
Q psy13580 95 KVTHAVV 101 (109)
Q Consensus 95 ai~~a~l 101 (109)
|+.+++-
T Consensus 484 A~lA~~a 490 (554)
T 3l0q_A 484 AMMGTVA 490 (554)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 24
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=95.50 E-value=0.037 Score=39.97 Aligned_cols=65 Identities=15% Similarity=0.123 Sum_probs=41.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch------hHHHhhhccchhhe
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK------ETAEAYLGKKVTHA 99 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~------~~a~a~lGaai~~a 99 (109)
++++..+++.+...+.+.++..++ .+.|+++||.++.|.+++.+++.++ .++ ..+.+. |||+.+.
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg-~~v~~p~~~~~~~Al-GAAl~A~ 255 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLG-VEIKTSPLAQYNGAL-GAALYAY 255 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHC-SCEECCGGGGGHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHC-CCeEeCCCcchHhHH-HHHHHHH
Confidence 333444555544444455544322 3679999999999999999999994 322 223454 8887664
No 25
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.50 E-value=0.019 Score=44.72 Aligned_cols=71 Identities=15% Similarity=0.126 Sum_probs=45.3
Q ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccchhh
Q psy13580 24 SPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKVTH 98 (109)
Q Consensus 24 tr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai~~ 98 (109)
+|.++ ..-+++.+.-.++.+++.-+-.. .++.|.++||.++-|.+.+.+.+.+ +.++ .++.+. |||+.+
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~al-GaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRPVVKETTAL-GAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEESCSCHHHH-HHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEcCCCcchHH-HHHHHH
Confidence 55555 33344444433444443332222 5788999999999999999999999 4433 245555 888876
Q ss_pred ee
Q psy13580 99 AV 100 (109)
Q Consensus 99 a~ 100 (109)
++
T Consensus 439 ~~ 440 (497)
T 2zf5_O 439 GL 440 (497)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 26
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.48 E-value=0.026 Score=44.56 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=48.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccchhheee
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKVTHAVV 101 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai~~a~l 101 (109)
.++..-+++.+.-.++..++..+.....++.|.++||.++-|.+.+.+.+.++ ..+ .++.+. |+|+.+++-
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g-~pV~~~~~~e~~al-GaA~lA~~a 482 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFD-APVYVIDTANSACV-GSAYRAFHG 482 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHT-SCEEECCCTTHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhC-CceEecCCCCchHH-HHHHHHHHH
Confidence 33455555555555555555555444567899999999999999999999994 432 345554 888776653
No 27
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=95.48 E-value=0.018 Score=46.48 Aligned_cols=38 Identities=32% Similarity=0.401 Sum_probs=30.5
Q ss_pred HHHHHhcCC-----CcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 44 TIVLEDADM-----NKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 44 ~~~l~~a~~-----~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
...|+..+. +..||..|+|+||++.+|-+.++.++.|.
T Consensus 533 ~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~ 575 (607)
T 1nbw_A 533 TNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALS 575 (607)
T ss_dssp HHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHH
T ss_pred HHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 344655554 24577999999999999999999999994
No 28
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.28 E-value=0.041 Score=43.03 Aligned_cols=72 Identities=14% Similarity=-0.014 Sum_probs=45.7
Q ss_pred cCHHHHHHHhHH-HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREEINHA-SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~~~-~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-||.++-+.+-+ +.-.+.+.+ +.+++.+. .++.|.++||.++-|.+.+.+.+.+ +.++ .++.+. |+|+
T Consensus 363 ~~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~e~~al-GaA~ 436 (504)
T 3ll3_A 363 HQKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIF-NVPIVTMKEQQSGTL-AAMF 436 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEESCSCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEecCCCCchhH-HHHH
Confidence 366666433322 222222222 33444443 5789999999999999999999999 4433 335555 8888
Q ss_pred hhee
Q psy13580 97 THAV 100 (109)
Q Consensus 97 ~~a~ 100 (109)
.+++
T Consensus 437 lA~~ 440 (504)
T 3ll3_A 437 LARQ 440 (504)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 29
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=95.09 E-value=0.04 Score=44.53 Aligned_cols=29 Identities=41% Similarity=0.521 Sum_probs=26.6
Q ss_pred CcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 53 NKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 53 ~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
+..||..|+|+||++.+|-+.++.++.|.
T Consensus 545 ~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 545 NIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred cccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 45788999999999999999999999994
No 30
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.07 E-value=0.042 Score=43.05 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=45.2
Q ss_pred cCHHHHHHHhHH-HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREEINHA-SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~~~-~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-||.++-+.+-+ +.-.+...+ +.+++.|. .++.|.++||.++.|.+.+.+.+.+ +.++ .++.+. |+|+
T Consensus 370 ~~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~e~~al-GaA~ 443 (508)
T 3ifr_A 370 HTRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLANPLGSAV-GAAW 443 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEECCSTHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCCCCchHH-HHHH
Confidence 366666443322 222223333 33445554 4678999999999999999999999 4433 234454 8887
Q ss_pred hhee
Q psy13580 97 THAV 100 (109)
Q Consensus 97 ~~a~ 100 (109)
.+++
T Consensus 444 lA~~ 447 (508)
T 3ifr_A 444 VAAI 447 (508)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 31
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.97 E-value=0.041 Score=43.11 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=33.6
Q ss_pred ccEEEEecCccccchhhHHHHHHhcccch------hHHHhhhccchhhee
Q psy13580 57 VDEIVLVGGSTRIPKVQQLVKEFFNSKMK------ETAEAYLGKKVTHAV 100 (109)
Q Consensus 57 I~~VilvGGssriP~V~~~l~~~f~~~~~------~~a~a~lGaai~~a~ 100 (109)
++.|.++||.++-|...+.+.+.+ +.++ .++.+. |+|+.+++
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~~e~~al-GaA~lA~~ 450 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKPDAHLHPLR-GLAALAAV 450 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECCCGGGHHHH-HHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEecCCCCchHH-HHHHHHHH
Confidence 788999999999999999999999 4443 235554 88887654
No 32
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.57 E-value=0.088 Score=41.04 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=46.3
Q ss_pred cCHHHHHHHhH-HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREEINH-ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~~-~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-+|.++-+.+- -+.-++.+.++..-+..|. .++.|.++||.++-|.+.+.+.+.+ +.++ .++.+. |+|+
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~~~~e~~al-GaA~ 447 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERPEIQETTAL-GAAF 447 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEESCCCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEecCCCcchHH-HHHH
Confidence 35666543332 2333333333333333564 4678999999999999999999999 4433 245565 8888
Q ss_pred hhee
Q psy13580 97 THAV 100 (109)
Q Consensus 97 ~~a~ 100 (109)
.+++
T Consensus 448 la~~ 451 (501)
T 3g25_A 448 LAGL 451 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 33
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.40 E-value=0.061 Score=41.85 Aligned_cols=73 Identities=12% Similarity=0.119 Sum_probs=45.6
Q ss_pred cCHHHHHH-HhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREE-INHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~-l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-+|.++-+ +++-+.-++...++..-+..|. .++.|.++||.++.|.+.+.+.+.+ +.++ .++.+. |+|+
T Consensus 367 ~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~~~~e~~al-GaA~ 441 (495)
T 2dpn_A 367 TSRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVPEVTETTAL-GAAL 441 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEESCSCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHh-CCeeEecCCcccHHH-HHHH
Confidence 35665533 2233333344444433233454 4577999999999999999999999 4443 245555 8887
Q ss_pred hhee
Q psy13580 97 THAV 100 (109)
Q Consensus 97 ~~a~ 100 (109)
.+++
T Consensus 442 la~~ 445 (495)
T 2dpn_A 442 MAGV 445 (495)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 34
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=94.21 E-value=0.054 Score=42.00 Aligned_cols=44 Identities=18% Similarity=0.330 Sum_probs=33.0
Q ss_pred cccEEEEecCccccchhhHHHHHHhcccchh-----HH-Hhhhccchhheee
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFNSKMKE-----TA-EAYLGKKVTHAVV 101 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~~~~~~-----~a-~a~lGaai~~a~l 101 (109)
.++.|.++||.++.|.+.+.+.+.+ +..+. ++ .+ +|||+.+++-
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~a-lGAA~lA~~~ 435 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPA-LGAARLAQIA 435 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHH-HHHHHHHHHH
T ss_pred CcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccH-HHHHHHHHHH
Confidence 4577999999999999999999999 44332 22 34 4888776543
No 35
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.20 E-value=0.1 Score=40.92 Aligned_cols=75 Identities=9% Similarity=0.129 Sum_probs=48.1
Q ss_pred ccCHHHHHHHhH-HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccc
Q psy13580 22 STSPEPREEINH-ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKK 95 (109)
Q Consensus 22 ~itr~~fe~l~~-~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaa 95 (109)
.-||.++-+.+- -+.-.+.+.++..-++.|.. ++.|.++||.++-|...+.+.+.+ +.++ .++.+. |||
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~~~~E~~al-GAA 444 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDIL-GTRVERPEVREVTAL-GAA 444 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEEESCCCHHHH-HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHH-CCEEEeCCCCchHHH-HHH
Confidence 346666543332 22233334444433456754 578999999999999999999999 4443 345565 888
Q ss_pred hhheee
Q psy13580 96 VTHAVV 101 (109)
Q Consensus 96 i~~a~l 101 (109)
+.+++-
T Consensus 445 ~lA~~a 450 (526)
T 3ezw_A 445 YLAGLA 450 (526)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877653
No 36
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.11 E-value=0.13 Score=40.09 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=46.1
Q ss_pred ccCHHHHHHHhHH-HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccc
Q psy13580 22 STSPEPREEINHA-SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKK 95 (109)
Q Consensus 22 ~itr~~fe~l~~~-~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaa 95 (109)
.-+|.++-+.+-+ +.-.+.+.++..-+..|. .++.|.++||.++-|...+.+.+.+ +.++ .++.+. |+|
T Consensus 371 ~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~e~~al-GaA 445 (506)
T 3h3n_X 371 GTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRAANLETTAL-GAA 445 (506)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEECSSSCHHHH-HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEecCCCcchhH-HHH
Confidence 3466666433322 223333333333223464 4678999999999999999999999 4433 245555 888
Q ss_pred hhhee
Q psy13580 96 VTHAV 100 (109)
Q Consensus 96 i~~a~ 100 (109)
+.+++
T Consensus 446 ~lA~~ 450 (506)
T 3h3n_X 446 YLAGL 450 (506)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 37
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.06 E-value=0.046 Score=43.41 Aligned_cols=73 Identities=14% Similarity=0.195 Sum_probs=46.4
Q ss_pred CHHHHHHHhHH-HHHHHHHHHHHHHHhcCCCcccccEEEEecCcc-ccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 24 SPEPREEINHA-SGLNGAGALTIVLEDADMNKKDVDEIVLVGGST-RIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 24 tr~~fe~l~~~-~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGss-riP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
||.++-+.+-+ +.-.+.+.+ +.+++.|. .++.|.++||.+ +-|...+.+.+.| +.++ .++.+. |+|+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~~~~e~~al-GaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVT-NREIKVAASKQTPAL-GAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEBCCSSHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEecCCCccHHH-HHHH
Confidence 66665433322 222222222 33445554 468899999999 9999999999999 4433 345565 8888
Q ss_pred hheeec
Q psy13580 97 THAVVT 102 (109)
Q Consensus 97 ~~a~lt 102 (109)
.+++-.
T Consensus 484 lA~~a~ 489 (572)
T 3jvp_A 484 FASVAA 489 (572)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 776543
No 38
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.01 E-value=0.084 Score=41.49 Aligned_cols=44 Identities=11% Similarity=0.031 Sum_probs=33.4
Q ss_pred cccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccchhheee
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKVTHAVV 101 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai~~a~l 101 (109)
.++.|.++||.++-|...+.+.+.+ +.++ .++.+. |||+.+++-
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~~~e~~al-GAA~lA~~a 473 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRPVILETTAL-GVAWLAGSR 473 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEESCCCHHHH-HHHHHHHHH
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEecCCCccHHH-HHHHHHHHH
Confidence 4678999999999999999999999 4433 245565 888877653
No 39
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.87 E-value=0.13 Score=40.15 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=46.8
Q ss_pred cCHHHHHHHh-HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREEIN-HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~-~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-+|.++-+.+ +-+.-.+...++..-+..|. .++.|.++||.++-|.+.+.+.+.+ +..+ .++.+. |+|+
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~al-GaA~ 446 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRPKVAETTAL-GAAY 446 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEESCSCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeCCCCcchHH-HHHH
Confidence 3566554332 23333344444433333454 3578999999999999999999999 4443 245555 8888
Q ss_pred hheee
Q psy13580 97 THAVV 101 (109)
Q Consensus 97 ~~a~l 101 (109)
.+++-
T Consensus 447 lA~~~ 451 (504)
T 2d4w_A 447 AAGIA 451 (504)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 77653
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.74 E-value=0.12 Score=40.22 Aligned_cols=73 Identities=11% Similarity=0.104 Sum_probs=45.4
Q ss_pred cCHHHHHHHh-HHHHHHHHHHHHHHHHhcCCCcccc-cEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccc
Q psy13580 23 TSPEPREEIN-HASGLNGAGALTIVLEDADMNKKDV-DEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKK 95 (109)
Q Consensus 23 itr~~fe~l~-~~~~~~~~~~v~~~l~~a~~~~~~I-~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaa 95 (109)
-+|.++-+.+ +-+.-++...++..-+..|.. + +.|.++||.++-|.+.+.+.+.+ +.++ .++.+. |+|
T Consensus 375 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~---~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~~~~e~~al-GaA 449 (503)
T 2w40_A 375 TERSHIVRALLEGIAFQLNEIVDSLTSDMGIE---MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVSKYKEVTSL-GAA 449 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS---CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEESCSCHHHH-HHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccceEEEeCccccCHHHHHHHHHHH-CCeEEecCCCcchHH-HHH
Confidence 3565554322 233333334443332334543 4 67999999999999999999999 4443 245555 888
Q ss_pred hhhee
Q psy13580 96 VTHAV 100 (109)
Q Consensus 96 i~~a~ 100 (109)
+.+++
T Consensus 450 ~la~~ 454 (503)
T 2w40_A 450 VLAGL 454 (503)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.67 E-value=0.049 Score=42.69 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=45.3
Q ss_pred cCHHHHHHHhH-HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccch-----hHHHhhhccch
Q psy13580 23 TSPEPREEINH-ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMK-----ETAEAYLGKKV 96 (109)
Q Consensus 23 itr~~fe~l~~-~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~-----~~a~a~lGaai 96 (109)
-||.++-+.+- -+.-.+.+.++..-+..|. .++.|.++||.++-|.+.+.+.+.+ +.++ .++.+. |+|+
T Consensus 370 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~e~~al-GaA~ 444 (510)
T 2p3r_A 370 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERPEVREVTAL-GAAY 444 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEESCCCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEecCCCCcHHH-HHHH
Confidence 35666543332 2223333333332233354 4678999999999999999999999 4433 245555 8887
Q ss_pred hhee
Q psy13580 97 THAV 100 (109)
Q Consensus 97 ~~a~ 100 (109)
.+++
T Consensus 445 lA~~ 448 (510)
T 2p3r_A 445 LAGL 448 (510)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 42
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=91.57 E-value=0.18 Score=38.98 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=29.6
Q ss_pred cccEEEEecCccccchhhHHHHHHhcccch----hHHHhhhccc
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFNSKMK----ETAEAYLGKK 95 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~~~~~----~~a~a~lGaa 95 (109)
.++.|.++||.++-|...+.+.+.++ .++ .++.+. |++
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvlg-~pV~~~~~e~~al-Gaa 434 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADACG-IRVIAGPVEASTL-GNI 434 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHT-SEEEECCTTHHHH-HHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHHC-CeeecCCccHhHH-HHH
Confidence 35789999999999999999999994 432 345554 883
No 43
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=90.29 E-value=0.67 Score=33.43 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
...+...+.++++|+++|++++|||.++.-|+++++ -+.+.+.|+
T Consensus 215 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 215 VAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344567788999999999999999999999988775 356777773
No 44
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=90.07 E-value=0.56 Score=34.46 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=40.5
Q ss_pred ccCHHHHHHH-hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecC-ccccchhhHHHHHHhc--cc------chhHHHhh
Q psy13580 22 STSPEPREEI-NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGG-STRIPKVQQLVKEFFN--SK------MKETAEAY 91 (109)
Q Consensus 22 ~itr~~fe~l-~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGG-ssriP~V~~~l~~~f~--~~------~~~~a~a~ 91 (109)
..++++.-.- +.-+.+++........+.-++ +.|+++|| -+..|.+++.+++++. +. .+....|.
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i-----~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREFKT-----ENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----CeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 4566665322 222333333333333344443 35999999 8999999999999741 22 23345554
Q ss_pred hccchh
Q psy13580 92 LGKKVT 97 (109)
Q Consensus 92 lGaai~ 97 (109)
||++.
T Consensus 281 -GAaL~ 285 (287)
T 2ews_A 281 -GALYL 285 (287)
T ss_dssp -HHHHT
T ss_pred -HHHHh
Confidence 77765
No 45
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=89.50 E-value=0.94 Score=32.51 Aligned_cols=43 Identities=23% Similarity=0.223 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+...+.++++|+++|++++|||.++.-++++++- +.+.+.|
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~l 252 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHh
Confidence 345677889999999999999999999999887654 5566666
No 46
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=88.77 E-value=0.96 Score=32.93 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+...+.++++|+++|++++|||.++.-++++++- +.+.+.|
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~---d~~~~~l 264 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRIL---AAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHc
Confidence 345677889999999999999999999999887753 5566666
No 47
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.30 E-value=0.62 Score=36.34 Aligned_cols=42 Identities=7% Similarity=-0.006 Sum_probs=33.2
Q ss_pred cEEEEecCccccchhhHHHHHH-hcccch-----hHHHhhhccchhheee
Q psy13580 58 DEIVLVGGSTRIPKVQQLVKEF-FNSKMK-----ETAEAYLGKKVTHAVV 101 (109)
Q Consensus 58 ~~VilvGGssriP~V~~~l~~~-f~~~~~-----~~a~a~lGaai~~a~l 101 (109)
+.|.++||.++.|...+.+.+. | +.++ .++.+. |||+.+++-
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~~~e~~al-GAA~lA~~a 436 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRP-DCAVYTANAHNDVSF-GALRLIDPG 436 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHST-TSEEEEESSCCCTTG-GGHHHHCTT
T ss_pred CeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcCCCchHHH-HHHHHhCcc
Confidence 6899999999999999999999 9 4433 234554 888877754
No 48
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=88.30 E-value=1 Score=32.22 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+...+.++++|+++|++++|||.++.-|+++++- +.+.+.|
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---~~~~~~l 250 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRII---NALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHH---HHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHh
Confidence 345677889999999999999999999999887753 4566666
No 49
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=88.27 E-value=0.87 Score=32.87 Aligned_cols=43 Identities=19% Similarity=0.115 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+...+.++++|+++|++++|||.++.-++++++ -+.+.+.|
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 260 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 34567788999999999999999999999988765 35577776
No 50
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=88.10 E-value=1.1 Score=34.14 Aligned_cols=43 Identities=19% Similarity=0.296 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKM 84 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~ 84 (109)
+...+-+.++... ...+.|+++||..+-|.+-+.|++.+++..
T Consensus 269 TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~ 311 (371)
T 3qbx_A 269 SARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEAR 311 (371)
T ss_dssp HHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCE
Confidence 3344444444432 245789999999999999999999986433
No 51
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=88.02 E-value=1 Score=32.89 Aligned_cols=43 Identities=19% Similarity=0.105 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+...+.++++|+++|++++|||.++.-++++++- +.+.+.|
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~---d~i~~~l 271 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRII---DVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHh
Confidence 345677889999999999999999999999887653 5566666
No 52
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=87.25 E-value=1.2 Score=33.15 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQ 74 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~ 74 (109)
.....+.+...++++|+++|++++|||.|...-|....+.++-
T Consensus 49 ~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrv 91 (334)
T 3eno_A 49 AVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRV 91 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHH
Confidence 3456678889999999999999999999999998877776654
No 53
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=86.90 E-value=1.2 Score=33.93 Aligned_cols=47 Identities=9% Similarity=0.056 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcc
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNS 82 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~ 82 (109)
..-+.+=+...+-+.++... ..+.|+++||..+-|.+-+.|++.+++
T Consensus 269 ~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~ 315 (370)
T 3cqy_A 269 QSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPG 315 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCC
Confidence 33344444455555554432 356899999999999999999999965
No 54
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=86.18 E-value=1.5 Score=32.14 Aligned_cols=43 Identities=23% Similarity=0.328 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCcc--ccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGST--RIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGss--riP~V~~~l~~~f~ 81 (109)
..+..+++|+++|++++|||.|+++.-+. .+|...-.|.+.++
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhC
Confidence 56788999999999999999999876553 46888888888874
No 55
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=85.33 E-value=1.4 Score=32.49 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=35.3
Q ss_pred HHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhh
Q psy13580 30 EINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ 73 (109)
Q Consensus 30 ~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~ 73 (109)
.......+.+...++++|+++|++++|||.|..+.|....+.++
T Consensus 42 ~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lr 85 (330)
T 2ivn_A 42 EAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALR 85 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHH
Confidence 34456677888999999999999999999999887776655444
No 56
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=85.15 E-value=1.7 Score=31.43 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.....+.++++|+++|++++|||.+++-++.+++- +.+.+.|
T Consensus 231 ~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~l 272 (335)
T 1u6e_A 231 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHc
Confidence 45677889999999999999999999999887754 4455565
No 57
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=84.90 E-value=0.55 Score=36.91 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=21.2
Q ss_pred ccEEEEecCccccchhhHHHHHHh
Q psy13580 57 VDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 57 I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.|+|+||+|.+|.+.++|++.+
T Consensus 501 ~~NIvltGG~s~~pGf~~RL~~eL 524 (593)
T 4fo0_A 501 YSSILVVGGGLMFHKAQEFLQHRI 524 (593)
T ss_dssp HHEEEEESSTTCCBTHHHHHHHHH
T ss_pred hCCEEEEchhhchhcHHHHHHHHH
Confidence 467999999999999998887775
No 58
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=84.64 E-value=3.7 Score=30.94 Aligned_cols=50 Identities=10% Similarity=0.104 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
.....+=..+..+++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 99 ~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LG 149 (393)
T 3ov2_A 99 VEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLG 149 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcC
Confidence 34556667788899999999999999998875332 246777777777773
No 59
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=84.56 E-value=1.6 Score=32.72 Aligned_cols=43 Identities=19% Similarity=0.105 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.++.-++++++- +.+.+.+
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~---d~~~~~l 327 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII---EQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHH---HHHHHHc
Confidence 345667788999999999999999999998887743 5566666
No 60
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=83.69 E-value=3.9 Score=30.65 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
...+=..+.++++|+++|++++|||.|++.-.+ ..+|.....+.+.++
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 128 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 128 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 344556778899999999999999999876433 246877777888774
No 61
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=83.45 E-value=3 Score=30.44 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
...+.+.+.++++|+++|++++|||.++.-.+..++ .+.+.+.+
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~l 274 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 444666788899999999999999999998887664 36666666
No 62
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=83.11 E-value=0.92 Score=36.23 Aligned_cols=45 Identities=56% Similarity=0.818 Sum_probs=32.1
Q ss_pred EEecCccccchhhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 61 VLVGGSTRIPKVQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 61 ilvGGssriP~V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
+.++|...-| .+....++ ......+..++|..+..+++|+|+||+
T Consensus 103 ~~~~~~~~~p--~ei~a~iL-~~lk~~ae~~lg~~v~~~VITVPa~f~ 147 (605)
T 4b9q_A 103 VEVKGQKMAP--PQISAEVL-KKMKKTAEDYLGEPVTEAVITVPAYFN 147 (605)
T ss_dssp EEETTEEECH--HHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCC
T ss_pred EEECCEEECH--HHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCC
Confidence 4456654433 34444444 666677888889999999999999997
No 63
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=82.14 E-value=5.3 Score=30.00 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
+...+=..+..+++|+++|++++|||.|++...+ -..|.....+...++
T Consensus 94 ~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 143 (387)
T 3oit_A 94 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLG 143 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhC
Confidence 3455567788899999999999999999875332 235666667777763
No 64
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=81.92 E-value=2 Score=30.18 Aligned_cols=39 Identities=10% Similarity=0.148 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ 73 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~ 73 (109)
.-+++...++++|+++|++++|||.|...-|-...+.+|
T Consensus 34 h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglR 72 (231)
T 2gel_A 34 HTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVR 72 (231)
T ss_dssp CHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHH
Confidence 456688899999999999999999999998876666555
No 65
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.50 E-value=0.59 Score=35.91 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhcCCC--cccccEEEEecCccccchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDADMN--KKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~--~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.+.+.+++.+...+ ++=.+.|+|+||+|.+|-+.++|++.+
T Consensus 306 gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El 350 (427)
T 3dwl_A 306 PLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDL 350 (427)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHH
T ss_pred CccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHH
Confidence 4667777777654422 222356999999999999999988765
No 66
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=81.48 E-value=5.4 Score=29.99 Aligned_cols=49 Identities=8% Similarity=0.238 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 154 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLG 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcC
Confidence 4455567788899999999999999998764322 245666677777773
No 67
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=81.22 E-value=5.1 Score=29.88 Aligned_cols=49 Identities=8% Similarity=0.171 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcC
Confidence 4455567788899999999999999998764322 245666677777774
No 68
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=81.09 E-value=6.3 Score=29.38 Aligned_cols=49 Identities=10% Similarity=0.172 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 149 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLG 149 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcC
Confidence 4455557788899999999999999998864322 245666677777773
No 69
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=80.97 E-value=6.2 Score=29.83 Aligned_cols=49 Identities=12% Similarity=0.148 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LG 167 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLG 167 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhC
Confidence 4555567788899999999999999998864322 246666677777763
No 70
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=80.75 E-value=5.4 Score=30.15 Aligned_cols=49 Identities=8% Similarity=0.150 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
+...+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 123 ~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 172 (413)
T 1xes_A 123 MEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLG 172 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcC
Confidence 4455557788899999999999999998764332 235666667777763
No 71
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=80.68 E-value=3.9 Score=30.00 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.+++-.+..++ .+.+.+.+
T Consensus 244 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~l 286 (345)
T 3s21_A 244 GIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---TAAFVKSF 286 (345)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHc
Confidence 44556678889999999999999999999888664 36666666
No 72
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=80.50 E-value=1.9 Score=30.22 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHH
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQL 75 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~ 75 (109)
..-+++...++++|+++|+++.|||.|...-|-.....+|=-
T Consensus 34 ~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig 75 (213)
T 3r6m_A 34 DHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIG 75 (213)
T ss_dssp CCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHH
Confidence 455677889999999999999999999999998887777643
No 73
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=80.41 E-value=6.7 Score=29.49 Aligned_cols=49 Identities=10% Similarity=0.112 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLG 162 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcC
Confidence 4455567788899999999999999998864321 256767777777774
No 74
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=80.28 E-value=7.4 Score=28.86 Aligned_cols=49 Identities=16% Similarity=0.272 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
++..+=..+.++++|+++|+++++||.|+....+ -.+|.....+...++
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lG 131 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMG 131 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhC
Confidence 3445557788999999999999999987754432 135666667777763
No 75
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=80.16 E-value=3.3 Score=30.29 Aligned_cols=46 Identities=24% Similarity=0.337 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
.+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 59 ~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 106 (323)
T 3il3_A 59 ATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLN 106 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhC
Confidence 3446788899999999999999998875332 235766777777774
No 76
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=80.05 E-value=3.2 Score=30.69 Aligned_cols=46 Identities=15% Similarity=0.235 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
.+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 67 ~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 114 (354)
T 4efi_A 67 GDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 3446788899999999999999998875433 345777777777773
No 77
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=79.95 E-value=1.8 Score=32.48 Aligned_cols=44 Identities=27% Similarity=0.263 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHh
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFF 80 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f 80 (109)
......++++|+++|++++|||.|..-|.+|.+ |.--+.+.+.|
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~ 320 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVF 320 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHh
Confidence 345678999999999999999999999988875 22334566666
No 78
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=79.65 E-value=2.9 Score=27.90 Aligned_cols=31 Identities=13% Similarity=0.172 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEe
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLV 63 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~Vilv 63 (109)
+++.+.+.+++++.+++++++++||-+|+++
T Consensus 47 e~I~~At~ELl~eii~~N~l~~eDIvSv~FT 77 (148)
T 1xho_A 47 DEIVAETQKLLKEMAEKNGLEEDDIISIIFT 77 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEE
Confidence 3456778888889999999999999999985
No 79
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=79.48 E-value=6.3 Score=30.62 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
...+=..+.++++|+++|++++|||.|+++--+ ..+|.....|.+.++
T Consensus 109 ~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 109 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 157 (465)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhC
Confidence 344556788899999999999999999876432 246777777888874
No 80
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=79.30 E-value=3.6 Score=30.00 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 68 la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lg 113 (333)
T 4dfe_A 68 LAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLG 113 (333)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhC
Confidence 36788899999999999999998875332 245777777888774
No 81
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=79.29 E-value=2.1 Score=30.07 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhH
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQ 74 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~ 74 (109)
....+++...++++|++++++++|||.|...-|-.....+|=
T Consensus 43 r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRi 84 (218)
T 2a6a_A 43 KKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRV 84 (218)
T ss_dssp GGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHH
Confidence 446677888999999999999999999999999877776664
No 82
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=79.01 E-value=3.7 Score=29.88 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
.+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lG 100 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcC
Confidence 3446678889999999999999998875432 245766777777773
No 83
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=78.84 E-value=6.8 Score=29.40 Aligned_cols=49 Identities=12% Similarity=0.207 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLG 162 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 4555567788899999999999999998864332 235656667777763
No 84
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=78.43 E-value=7.1 Score=28.71 Aligned_cols=49 Identities=22% Similarity=0.192 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
.+..+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lG 142 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLG 142 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcC
Confidence 4455557788899999999999999988754332 235656667777763
No 85
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=78.01 E-value=4.4 Score=28.79 Aligned_cols=47 Identities=21% Similarity=0.309 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++||.|++.-.. ...|.....+...++
T Consensus 50 ~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lg 98 (309)
T 2ebd_A 50 ITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLK 98 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 44556788899999999999999987764332 225656677777774
No 86
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=77.94 E-value=9.8 Score=29.00 Aligned_cols=48 Identities=19% Similarity=0.224 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
...+=..+.++++|+++|++++|||.|++.-.+ -.+|..-..+...++
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 184 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLP 184 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhC
Confidence 344556788899999999999999999875432 246777777777773
No 87
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=77.80 E-value=4.8 Score=29.89 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 76 ~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lG 122 (359)
T 3h78_A 76 ALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLG 122 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 336778899999999999999998875332 245766777777773
No 88
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=77.68 E-value=5.2 Score=29.68 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.+++--+..++ .+.+.+.+
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i---~~~~~~~L 306 (365)
T 3gwa_A 264 SLAEVPRAADRLLALAGEPRENIDCFVLHQANRFM---LDALRKKM 306 (365)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 34556678899999999999999999998877664 36666666
No 89
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=77.43 E-value=6.2 Score=29.28 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.+++--+..++ .+.+.+.+
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i---~~~~~~~l 294 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI---LDAVQEQL 294 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 44566788999999999999999999998887654 35666665
No 90
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=77.43 E-value=3.4 Score=26.95 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEe
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLV 63 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~Vilv 63 (109)
+++.+.+.+++++.+++++++++||-+|+++
T Consensus 18 e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT 48 (127)
T 1dbf_A 18 EEILQKTKQLLEKIIEENHTKPEDVVQMLLS 48 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEE
Confidence 4566778888899999999999999999985
No 91
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=77.17 E-value=4 Score=30.33 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~~~f~ 81 (109)
..+.++++|+++|+++++||.|++.-. ....|..-..+...++
T Consensus 84 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 128 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLG 128 (365)
T ss_dssp HHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 678889999999999999999887432 2346766677777773
No 92
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=77.17 E-value=6.3 Score=28.74 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.+++--+..++ .+.+.+.+
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~l 264 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQANLRI---ITATAKKL 264 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 34556678899999999999999999998887654 36666666
No 93
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=77.05 E-value=2.5 Score=31.49 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+.+. .++++|+++|++++|||.++.-++++++- +.+.+.+
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~---d~~~~~l 292 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVHAGGPRIL---DDLSTFL 292 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHH---HHHHHHS
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHc
Confidence 4455 88999999999999999999999987653 5666666
No 94
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=76.99 E-value=8 Score=28.82 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCc-cccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-sriP~V~~~l~~~f~ 81 (109)
....+=..+.++++|+++|+++++||.|++...+ ...|.....+...++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 160 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELG 160 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcC
Confidence 3445556788899999999999999988764332 235656667777763
No 95
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=76.89 E-value=3.8 Score=30.42 Aligned_cols=43 Identities=23% Similarity=0.127 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEE-ecCccccchhhHHH
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVL-VGGSTRIPKVQQLV 76 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~Vil-vGGssriP~V~~~l 76 (109)
-..+.+.+.++++|+++|++++|||.+++ --+..++..+.+.|
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~~~~~~~l 278 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTGHELHDLL 278 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHc
Confidence 34567788999999999999999999997 44444455555544
No 96
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=76.56 E-value=2.1 Score=29.14 Aligned_cols=46 Identities=13% Similarity=0.036 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
.+++.+++++-..+.|++.|+..++|+ ++-|-|+--+|.+-+.|.+
T Consensus 27 n~~I~~~Ll~gA~~~L~~~Gv~~~~i~-v~~VPGafEiP~aak~la~ 72 (168)
T 1ejb_A 27 NRVIIDALVKGAIERMASLGVEENNII-IETVPGSYELPWGTKRFVD 72 (168)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCGGGEE-EEECSSGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceE-EEECCcHHHHHHHHHHHHh
Confidence 445666777777788888998877776 7789999999999777655
No 97
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=76.54 E-value=7.1 Score=29.56 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=20.3
Q ss_pred EEEEecC-ccccchhhHHHHHHh
Q psy13580 59 EIVLVGG-STRIPKVQQLVKEFF 80 (109)
Q Consensus 59 ~VilvGG-ssriP~V~~~l~~~f 80 (109)
.|+++|| -+..|.+.+.|++.+
T Consensus 308 ~IvftGgfla~n~~~~~~L~~~l 330 (360)
T 2i7n_A 308 RVVFVGNFLRINMVSMKLLAYAM 330 (360)
T ss_dssp CEEEESGGGCSSSHHHHHHHHHH
T ss_pred eEEEeCcccccCHHHHHHHHHHH
Confidence 4999999 999999999999986
No 98
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=76.22 E-value=5.2 Score=28.82 Aligned_cols=47 Identities=15% Similarity=0.285 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 61 ~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lg 109 (335)
T 1u6e_A 61 AASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLG 109 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhC
Confidence 34456788899999999999999987764332 245666777777774
No 99
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=75.69 E-value=2.2 Score=34.01 Aligned_cols=44 Identities=52% Similarity=0.739 Sum_probs=30.3
Q ss_pred EecCccccchhhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 62 LVGGSTRIPKVQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 62 lvGGssriP~V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
-++|...- ..+....++ ......+..++|..+..+++|+|+||+
T Consensus 104 ~~~g~~~~--~~ei~a~~L-~~l~~~ae~~l~~~v~~~VitVPa~f~ 147 (605)
T 2kho_A 104 EVKGQKMA--PPQISAEVL-KKMKKTAEDYLGEPVTEAVITVPAYFN 147 (605)
T ss_dssp EETTEEEC--HHHHHHHHH-HHHHHHHHHHHCSCCCEEEEEECTTCC
T ss_pred EECCEEEc--HHHHHHHHH-HHHHHHHHHHhCCCCcEEEEEECCCCC
Confidence 34664322 344444445 555667778889999999999999996
No 100
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=75.29 E-value=4.2 Score=30.67 Aligned_cols=46 Identities=9% Similarity=0.093 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
.+=..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 118 ~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LG 165 (392)
T 3led_A 118 AEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALG 165 (392)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhC
Confidence 3446678889999999999999998874332 346766667777763
No 101
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=75.21 E-value=3.1 Score=31.74 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHhcc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFFNS 82 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f~~ 82 (109)
......++++|+++|++++|||.|..-|-++.+ |.=.+.|.+.|++
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~ 349 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG 349 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhcc
Confidence 456778999999999999999999999655544 3334556777743
No 102
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=74.89 E-value=3.3 Score=31.29 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f~ 81 (109)
.....++++|+++|++++|||.|..-|-+|.+ |.=.+.+.+.|+
T Consensus 284 ~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~ 329 (424)
T 1tqy_A 284 EMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALG 329 (424)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhc
Confidence 45678999999999999999999999977764 223345677774
No 103
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=74.88 E-value=4.4 Score=26.21 Aligned_cols=31 Identities=13% Similarity=0.219 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCc-ccccEEEEe
Q psy13580 33 HASGLNGAGALTIVLEDADMNK-KDVDEIVLV 63 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~-~~I~~Vilv 63 (109)
+++.+.+.+++++.++++++++ +||-+|+++
T Consensus 17 e~I~~at~eLl~~i~~~N~l~~~~divSv~FT 48 (122)
T 1ufy_A 17 EAIHQATRELLLKMLEANGIQSYEELAAVIFT 48 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHhEEEEEEE
Confidence 4566778888899999999999 999999986
No 104
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=74.70 E-value=5.2 Score=29.27 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 116 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLG 116 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhC
Confidence 6788899999999999999998764322 235666777777773
No 105
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=74.42 E-value=6.2 Score=28.20 Aligned_cols=47 Identities=21% Similarity=0.263 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++|+.|++.-.+ ...|.+...+...++
T Consensus 51 ~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lg 99 (317)
T 1hnj_A 51 VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLG 99 (317)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 34456788899999999999999987753322 236667777888774
No 106
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=74.42 E-value=6.2 Score=28.08 Aligned_cols=47 Identities=19% Similarity=0.320 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++||.|++.-.+ ...|.....+...++
T Consensus 51 ~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lg 99 (313)
T 1zow_A 51 TSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLG 99 (313)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 44556788899999999999999987764332 235666677777764
No 107
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=74.36 E-value=3.5 Score=31.42 Aligned_cols=45 Identities=27% Similarity=0.387 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
......++++|+++|++++|||.|..-|-+|.+- .=-+.+.+.|+
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg 347 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFG 347 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHh
Confidence 3456789999999999999999999999888752 22245666774
No 108
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=74.27 E-value=8.1 Score=25.91 Aligned_cols=47 Identities=13% Similarity=0.161 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHHhcC-CCcccccEEEEecCccccchhhHHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDAD-MNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~-~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
.+++.+++++-..+.|++.| +..++|+ ++-|-|+--+|..-+.+.+.
T Consensus 23 n~~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 23 NQFINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKS 70 (156)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhc
Confidence 45667777777778888899 9888887 88899999999998887554
No 109
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=74.04 E-value=6.8 Score=28.88 Aligned_cols=43 Identities=9% Similarity=-0.003 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++|||.+++--+..++ .+.+.+.+
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~L 284 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFM---LKHLAKKA 284 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHh
Confidence 34556678889999999999999999998887664 36666666
No 110
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=74.04 E-value=1.8 Score=35.16 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=27.4
Q ss_pred hHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 73 QQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 73 ~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
.+.+..++ ......+..++|..+..+++|+|+||+
T Consensus 116 eei~a~~L-~~lk~~ae~~lg~~v~~~VITVPa~f~ 150 (675)
T 3d2f_A 116 TQLAAMFI-DKVKDTVKQDTKANITDVCIAVPPWYT 150 (675)
T ss_dssp HHHHHHHH-HHHHHHHHHHHCSCCCEEEEEECTTCC
T ss_pred HHHHHHHH-HHHHHHHHHHhCCCcceEEEEECCCCC
Confidence 45555555 666667777889999999999999996
No 111
>2dyy_A UPF0076 protein PH0854; putative translation initiation inhibitor, trimer, structural genomics, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=74.02 E-value=13 Score=23.24 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 49 ~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~~~P 101 (126)
T 2dyy_A 49 DQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKP 101 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECC-CCTTHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCCCCC
Confidence 344556667778888999988875442 3444567888999999999965434
No 112
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=73.24 E-value=6.7 Score=28.44 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++||.|++.-++ ...|.....+...++
T Consensus 60 ~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lg 108 (339)
T 1mzj_A 60 IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELG 108 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhC
Confidence 34456788899999999999999987754322 235666677777774
No 113
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=73.22 E-value=3.9 Score=31.18 Aligned_cols=45 Identities=18% Similarity=0.284 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f~ 81 (109)
......++++|+++|++++|||.|..-|-+|.+ |.=-+.|.+.|+
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg 347 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFK 347 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHh
Confidence 456678999999999999999999999988774 122245666673
No 114
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=73.15 E-value=6.2 Score=29.21 Aligned_cols=45 Identities=16% Similarity=0.011 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc---cccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS---TRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs---sriP~V~~~l~~~f 80 (109)
.+=..+.++++|+++|+++++||.|++.-.+ -..+.....+...+
T Consensus 55 ~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~l 102 (357)
T 3s3l_A 55 PRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEA 102 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHh
Confidence 3446678889999999999999998875431 11223345565655
No 115
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=72.13 E-value=2.2 Score=33.65 Aligned_cols=35 Identities=63% Similarity=0.928 Sum_probs=26.6
Q ss_pred hHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 73 QQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 73 ~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
.+.+..++ ......+..++|..+..+++|+|+||+
T Consensus 117 ~ei~a~~L-~~lk~~ae~~lg~~v~~~VitVPa~f~ 151 (554)
T 1yuw_A 117 EEVSSMVL-TKMKEIAEAYLGKTVTNAVVTVPAYFN 151 (554)
T ss_dssp HHHHHHHH-HHHHHHHHHHHSSCCCEEEEEECTTCC
T ss_pred HHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCC
Confidence 44555555 555566777889999999999999996
No 116
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=71.97 E-value=4.9 Score=29.62 Aligned_cols=41 Identities=17% Similarity=0.275 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhcC------CCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDAD------MNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~------~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.+.+.++++|+++| ++++|||.+ +-++.+++ -+.+.+.+
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i---~d~~~~~l 312 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSI---LMNIENSL 312 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHH---HHHHHHHc
Confidence 4556678899999999 999999999 88887664 35677776
No 117
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=71.88 E-value=5 Score=30.12 Aligned_cols=36 Identities=8% Similarity=-0.094 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCcccc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI 69 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri 69 (109)
-.++.+.+.++++|+++|++++|||.++.-+..+++
T Consensus 204 ~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~ 239 (396)
T 1xpm_A 204 AYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKM 239 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHH
Confidence 345667788999999999999999999999887764
No 118
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=71.75 E-value=2.6 Score=31.81 Aligned_cols=45 Identities=20% Similarity=0.208 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f~ 81 (109)
......++++|+++|++++|||.|..-|-+|.+ |.=-+.|.+.|+
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g 327 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALG 327 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHc
Confidence 345678999999999999999999999888764 222345667773
No 119
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=71.03 E-value=2.4 Score=33.42 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCC--CcccccEEEEecCccccchhhHHHHHHh
Q psy13580 39 GAGALTIVLEDADM--NKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 39 ~~~~v~~~l~~a~~--~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+-+.+.+++..... .+.=...|+|+||+|.+|-+.++|++-+
T Consensus 394 i~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El 437 (498)
T 3qb0_A 394 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTEL 437 (498)
T ss_dssp HHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHH
T ss_pred chHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHH
Confidence 34444555544332 2233467999999999999999988765
No 120
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=70.68 E-value=4.1 Score=33.15 Aligned_cols=47 Identities=15% Similarity=0.148 Sum_probs=37.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhH
Q psy13580 28 REEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQ 74 (109)
Q Consensus 28 fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~ 74 (109)
.+++.+-+.+.+.+.++++.+++++++++|..+.++|.++....+..
T Consensus 261 ~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLllg 307 (631)
T 3zyy_X 261 AEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLFLE 307 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHHcC
Confidence 44566667777888888999999999999999999999876655443
No 121
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=70.58 E-value=7.5 Score=27.81 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+.++++|+++|+++++||.|++.-+. ...|.....+...++
T Consensus 50 ~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lg 98 (322)
T 1ub7_A 50 TSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFG 98 (322)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 34456778899999999999999987753322 125556677777763
No 122
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=70.28 E-value=3.9 Score=30.92 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=24.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEE
Q psy13580 27 PREEINHASGLNGAGALTIVLEDADMNKKDVDEIVL 62 (109)
Q Consensus 27 ~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~Vil 62 (109)
.+|+...++ ..+.++++|+++|++++|||.|+.
T Consensus 50 t~e~a~sdL---a~~Aa~~AL~~AGi~~~DID~II~ 82 (347)
T 3lma_A 50 NWEMAERKL---MEDAVQSALSKQNLKKEDIDIFLA 82 (347)
T ss_dssp SHHHHHHHH---HHHHHHHHHHTTTCCGGGCSEEEE
T ss_pred CccHHHHHH---HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 344444443 457788999999999999999885
No 123
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=69.85 E-value=9.3 Score=28.60 Aligned_cols=45 Identities=16% Similarity=0.088 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~~~f~ 81 (109)
+=..+.++++|+++|+++++||.|++.-. ....|.+...+...++
T Consensus 33 ~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lG 79 (396)
T 4dd5_A 33 ELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAG 79 (396)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcC
Confidence 34567788999999999999999886421 1234666777777763
No 124
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=68.77 E-value=6.8 Score=29.51 Aligned_cols=44 Identities=2% Similarity=0.013 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
......+.+.++++|+++|++++|||.+++--+..+ +.+.+.+.
T Consensus 287 ~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~~---i~~~~~~~ 330 (392)
T 3led_A 287 KEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQANIN---MNEIIGRK 330 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCHH---HHHHHHHH
Confidence 344556778899999999999999999998777654 33555444
No 125
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=68.71 E-value=6.4 Score=28.67 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
....+.+.++++|+++|++++|||.+++--|+.++ .+.+.+.+
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i---~~~~~~~L 289 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRI---IDEFAKQL 289 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHH---HHHHHHHT
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHH---HHHHHHHc
Confidence 34556678899999999999999999998877554 35666665
No 126
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=68.59 E-value=16 Score=22.91 Aligned_cols=52 Identities=17% Similarity=0.284 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 47 ~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~~~P 99 (124)
T 1qd9_A 47 EQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKP 99 (124)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcCCCCC
Confidence 344556777788889999988876543 2344456778888899999965434
No 127
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=68.58 E-value=3.7 Score=33.60 Aligned_cols=27 Identities=30% Similarity=0.567 Sum_probs=23.5
Q ss_pred cccEEEEecCccccchhhHHHHHHhcc
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFNS 82 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~~ 82 (109)
=-+.|++|||++.+|.+.-+|++.+.-
T Consensus 500 ~y~nilivGggski~g~~~~L~dri~i 526 (655)
T 4am6_A 500 FYSNILIVGGSSKIPALDFILTDRINI 526 (655)
T ss_dssp HHTCEEEESTTCCCTTHHHHHHHHHHH
T ss_pred HhhcEEEEcCcccCccHHHHHHHHHHh
Confidence 356799999999999999999999753
No 128
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=68.06 E-value=4.8 Score=30.11 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~~~f 80 (109)
=..+.++++|+++|+++++||.|++.-- ....|..-..+...+
T Consensus 32 L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~l 76 (395)
T 4e1l_A 32 LGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHc
Confidence 3567788999999999999999886321 113355666676666
No 129
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=67.65 E-value=3.1 Score=31.31 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccccchhh--HHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ--QLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~--~~l~~~f~ 81 (109)
.....++++|+++|++++|||.|..-|-+|.+-=.. ..+++.|+
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g 325 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFG 325 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhC
Confidence 355789999999999999999999998887533222 34566663
No 130
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=67.46 E-value=16 Score=23.07 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 39 ~~Q~~~~l~ni~~~L~~aG~~l~~Vvk~~vyl~d~~df~~~n~v~~~~f~~~~P 92 (126)
T 2ewc_A 39 ESQINGAFDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVMEKMIKERFNGRYP 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESSGGGHHHHHHHHHHHSTTCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECChhHHHHHHHHHHHHcCCCCC
Confidence 3445567777888899999998886443 3445567788888899999965333
No 131
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=67.28 E-value=6.2 Score=27.61 Aligned_cols=58 Identities=16% Similarity=0.096 Sum_probs=32.1
Q ss_pred chhhHHhhhceeeccCc-----------cccCHHHHHHHh---HHHHHHHHHHHHHHHHhcCCCcccccEEE
Q psy13580 4 FSYLFLRIKAVVTLEPQ-----------PSTSPEPREEIN---HASGLNGAGALTIVLEDADMNKKDVDEIV 61 (109)
Q Consensus 4 ~~~~~~~~~~~i~l~~~-----------~~itr~~fe~l~---~~~~~~~~~~v~~~l~~a~~~~~~I~~Vi 61 (109)
|..+|..++++-...-. ..++++....+. ...+..+.+.+++.|++.|....+++.++
T Consensus 130 f~~LFDv~~a~~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nr~~~~~lk~vVdkyL~~~gy~~V~L~~lF 201 (206)
T 3flo_B 130 FDSLFDCEKNKKQELKPIYLPDDLDYPKEQLTESSIKALTEQNRELMETGRSVVQKYLNDCGRRYVDMTSIF 201 (206)
T ss_dssp HHHHTCHHHHHTTCSCCSSCTTSTTCCSSCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----------
T ss_pred HHHHhCHHHHHHHhcccccccccccccccccchhhhhhchHHHHHHHHHHHHHHHHHHHHcCCcEEeHHHHh
Confidence 45677777765433222 236776554444 46789999999999999999888877765
No 132
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=67.15 E-value=18 Score=23.33 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 61 ~Qt~~~l~ni~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~~~P 113 (140)
T 2b33_A 61 EKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRP 113 (140)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCchhHHHHHHHHHHHCCCCCC
Confidence 345567777888889999988876443 2344456778888899999965433
No 133
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=67.05 E-value=5.2 Score=29.96 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f 80 (109)
=..+.++++|+++|+++++||.|++.--. ...|.+-..+...+
T Consensus 32 L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~l 76 (394)
T 3ss6_A 32 LAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHc
Confidence 35677889999999999999998863211 12355556666665
No 134
>3i7t_A RV2704, putative uncharacterized protein; siras, YJGF/YER057C/UK114, homotrimer, quick SOAK NAI deriva unknown function; 1.93A {Mycobacterium tuberculosis}
Probab=66.86 E-value=13 Score=24.46 Aligned_cols=53 Identities=19% Similarity=0.181 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+...|
T Consensus 42 ~~Qt~~~l~ni~aiL~~aG~~l~dVvk~tvyl~d~~df~~~n~v~~~~f~~~~P 95 (149)
T 3i7t_A 42 AAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRP 95 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHccCCHhHEEEEEEEECCHHHHHHHHHHHHHHcCCCCC
Confidence 3344567777788888999988875332 3455566788888999999964433
No 135
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=66.76 E-value=3.8 Score=31.11 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccch--hhHHHHHHh
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPK--VQQLVKEFF 80 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~--V~~~l~~~f 80 (109)
......++++|+++|++++|||.|..-|-+|.+-- =-+.+...|
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~ 339 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVF 339 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHH
Confidence 44567899999999999999999999987776422 223455556
No 136
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=66.35 E-value=18 Score=23.01 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 57 Q~~~~l~nl~~~L~~aG~~l~~vvk~~vyl~d~~~f~~~n~v~~~~f~~~~P 108 (134)
T 3v4d_A 57 QTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP 108 (134)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHHHcCCCCC
Confidence 34566777788888999988875433 2444556778888889999964334
No 137
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=66.22 E-value=9 Score=26.78 Aligned_cols=48 Identities=27% Similarity=0.277 Sum_probs=35.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 26 EPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 26 ~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
++-+++.+..-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+.
T Consensus 8 ~~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~~ 55 (226)
T 3lwd_A 8 EGRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAAK 55 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhc
Confidence 45566777777777788888776544 2468899999999998887753
No 138
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=65.97 E-value=19 Score=22.49 Aligned_cols=52 Identities=15% Similarity=0.203 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 47 ~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~~~~~~~~f~~~~P 99 (124)
T 2cvl_A 47 VQTERVMENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVYARYFTPPYP 99 (124)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcCCCCC
Confidence 344566777788888999888876443 2344456778888899999965433
No 139
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=65.94 E-value=3.5 Score=31.26 Aligned_cols=46 Identities=17% Similarity=0.233 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccchhh--HHHHHHhcc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ--QLVKEFFNS 82 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~--~~l~~~f~~ 82 (109)
......++++|+++|++++|||.|..-|-+|.+--.. +.+.+.|++
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 343 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK 343 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC
Confidence 3556789999999999999999999999888753211 245666754
No 140
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=65.89 E-value=16 Score=29.70 Aligned_cols=57 Identities=9% Similarity=0.191 Sum_probs=42.1
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHH
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLV 76 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l 76 (109)
.+..||..+.+++. .-..-+..-++-+++++|++.+||+.|++.||-..-=-+.+++
T Consensus 498 ~~i~itq~DIr~~q-lAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~ 554 (631)
T 3zyy_X 498 KDIVITEADIQNLI-RAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAI 554 (631)
T ss_dssp SCEEEEHHHHHHHH-HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHH
T ss_pred CcEEEeHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHh
Confidence 34678999887654 2334456677788899999999999999999976654444443
No 141
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=65.24 E-value=20 Score=22.59 Aligned_cols=53 Identities=11% Similarity=0.230 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 50 ~~Q~~~~l~ni~~~L~~aG~~~~~vvk~~vyl~d~~d~~~~n~~~~~~f~~~~P 103 (129)
T 1jd1_A 50 ADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHKP 103 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEEcChHHHHHHHHHHHHHcCCCCC
Confidence 3445567777788888999988876443 2344456788888999999965333
No 142
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=65.23 E-value=4.8 Score=29.76 Aligned_cols=36 Identities=56% Similarity=0.842 Sum_probs=26.8
Q ss_pred hhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 72 VQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 72 V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
..+.+..++ ......+..++|..+..+++|+|+||+
T Consensus 135 ~~ei~a~~L-~~l~~~a~~~~~~~~~~~vitvPa~~~ 170 (404)
T 3i33_A 135 PEEISSMVL-TKMKEIAEAYLGGKVHSAVITVPAYFN 170 (404)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHSSCCCEEEEEECTTCC
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCcEEEEECCCCC
Confidence 345555555 555666777789999999999999986
No 143
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=65.03 E-value=5.4 Score=30.17 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCcccc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI 69 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri 69 (109)
......++++|+++|++++|||.|..-|-+|.+
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~ 317 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNAHGTATPI 317 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcC
Confidence 356678999999999999999999999887754
No 144
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=64.98 E-value=7.4 Score=29.87 Aligned_cols=46 Identities=11% Similarity=0.133 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCcc--ccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGST--RIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGss--riP~V~~~l~~~f 80 (109)
...=..+..+++|+++|+++++||.|++.--+. ..|...-.+.+.+
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l 101 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELF 101 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHH
Confidence 445577889999999999999999888754432 5787777777777
No 145
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=64.56 E-value=4.1 Score=30.29 Aligned_cols=36 Identities=39% Similarity=0.747 Sum_probs=27.4
Q ss_pred hhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 72 VQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 72 V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
..+.+..++ ......+..++|..+..+++|+|++|+
T Consensus 127 ~~ev~~~~L-~~l~~~a~~~~~~~~~~~vitvPa~~~ 162 (409)
T 4gni_A 127 VSEIATRYL-RRLVGAASEYLGKKVTSAVITIPTNFT 162 (409)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCC
T ss_pred HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCC
Confidence 345556665 555566777779999999999999986
No 146
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=64.09 E-value=4.8 Score=29.47 Aligned_cols=36 Identities=58% Similarity=0.884 Sum_probs=27.5
Q ss_pred hhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 72 VQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 72 V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
..+.+..++ ......+..++|..+..+++|+|++|+
T Consensus 130 ~~ei~a~~l-~~l~~~a~~~~~~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 130 PEEISGMIL-GKMKQIAEDYLGTKVTHAVVTVPAYFN 165 (394)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCC
T ss_pred HHHHHHHHH-HHHHHHHHHhcCCCcceEEEEECCCCC
Confidence 345555555 555667777889999999999999986
No 147
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=64.09 E-value=8.4 Score=27.45 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=28.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 26 EPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 26 ~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
+.|..+- .+.+++...+++.++.+++.+.+ ++++|.||.
T Consensus 35 ~~~~~m~-~i~~~~~~~l~Ell~~a~l~~G~---ifVvGcSTS 73 (235)
T 1v8d_A 35 GYHGGME-GIRRAAQRAAEEFLQAFPMAPGS---LFVLGGSTS 73 (235)
T ss_dssp -----CH-HHHHHHHHHHHHHHHHSCCCTTC---EEEEEECHH
T ss_pred cccccHH-HHHHHHHHHHHHHHHhcCCCCCC---EEEEeeeHH
Confidence 3344433 57888999999999999999976 899998875
No 148
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=63.85 E-value=20 Score=26.36 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+.+.+.+.+++++++.+. +.|++.||-..-..+++.+.+.+
T Consensus 233 l~~~l~~~~~~a~~~~g~-----~~vvlsGGVa~N~~L~~~L~~~l 273 (334)
T 3eno_A 233 AFAMLVEVLERALYVSGK-----DEILMAGGVALNRRLRDMVTNMA 273 (334)
T ss_dssp HHHHHHHHHHHHHHHHTC-----SEEEEESSGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC-----CeEEEcCCHHHHHHHHHHHHHHH
Confidence 444555666667666664 67999999999999999998876
No 149
>3m1x_A Putative endoribonuclease L-PSP; structural genomics, seattle structural genomics center for infectious disease, ssgcid, unknown function; HET: FLC; 1.20A {Entamoeba histolytica} PDB: 3m4s_A 3mqw_A*
Probab=63.83 E-value=22 Score=23.09 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|++..|
T Consensus 71 ~~Q~~~~l~nl~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~fg~~~P 124 (148)
T 3m1x_A 71 EEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFGNHKP 124 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhCCCCC
Confidence 3445567777788888899988875433 2344456678888889999964334
No 150
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=63.75 E-value=21 Score=22.36 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 50 ~~Q~~~~l~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~n~~~~~~f~~~~P 103 (128)
T 1x25_A 50 KVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPP 103 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcCCCCC
Confidence 3445567777888889999988876543 2344456788888889999964333
No 151
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=63.44 E-value=6 Score=29.70 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
......++++|+++|++++|||.|+.-|-+|..- .=-+.|...|+
T Consensus 277 ~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~ 323 (413)
T 3o04_A 277 EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFG 323 (413)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 3456789999999999999999999988776632 33345666674
No 152
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=63.43 E-value=5.9 Score=30.04 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccccchh--hHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKV--QQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V--~~~l~~~f~ 81 (109)
.....++++|+++|++++|||.|..-|-+| .--. -+.+.+.|+
T Consensus 294 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~d~~e~~al~~~~g 338 (428)
T 3kzu_A 294 GAQRCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVG 338 (428)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSS-TTHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCHHHeeEEEecCCcc-hhhHHHHHHHHHHhc
Confidence 455788999999999999999999998777 3322 244666664
No 153
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=63.35 E-value=17 Score=26.54 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+.+.+.+.++++.+..+ ++.|++.||-..-..+++.+.+.+
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l 268 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMT 268 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHH
Confidence 44445556666665544 467999999999999999998865
No 154
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=63.20 E-value=9 Score=31.79 Aligned_cols=42 Identities=14% Similarity=0.060 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.+.+.++++|+++|++++|||.++.-+++.++ -+.+.+.+
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i---~~~~~~~l 904 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAI---LDAVEAKL 904 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHH---HHHHHHHc
Confidence 4456778899999999999999999999988664 36666665
No 155
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=63.04 E-value=14 Score=27.59 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCcc---ccchhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGST---RIPKVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGss---riP~V~~~l~~~f~ 81 (109)
=..+..+++|+++|+++++||.|++-.... ..|.....+...++
T Consensus 29 L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lG 75 (401)
T 1ulq_A 29 LLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhC
Confidence 356778899999999999999877632211 13566677777773
No 156
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=62.91 E-value=21 Score=23.44 Aligned_cols=52 Identities=6% Similarity=0.184 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
+-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|++..|
T Consensus 75 ~Qt~~~l~Ni~a~L~~aG~~l~dVVkvtvyl~d~~df~~~n~v~~~~f~~~~P 127 (153)
T 3quw_A 75 EKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKP 127 (153)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcCCCCC
Confidence 455567777788889999988875443 2344456788888899999964444
No 157
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=62.90 E-value=6.2 Score=29.85 Aligned_cols=44 Identities=27% Similarity=0.279 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
.....++++|+++|++++|||.|..-|-+|..- .--..+.+.|+
T Consensus 293 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g 338 (427)
T 3ho9_A 293 GAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFG 338 (427)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhc
Confidence 455788999999999999999999988776532 23345666673
No 158
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=62.46 E-value=7 Score=29.23 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhc-CCCcccccEEEEecC---ccccchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDA-DMNKKDVDEIVLVGG---STRIPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a-~~~~~~I~~VilvGG---ssriP~V~~~l~~~f 80 (109)
=..+.++++|+++ |+++++||.|++--. ....|.+...+...+
T Consensus 30 L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~ 76 (387)
T 3goa_A 30 LSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLA 76 (387)
T ss_dssp HHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHc
Confidence 3567788999999 999999999876321 111455666666665
No 159
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=62.38 E-value=4.9 Score=30.21 Aligned_cols=47 Identities=23% Similarity=0.241 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhcc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFNS 82 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~~ 82 (109)
.......++++|+++|++++|||.|..-|=+|.+- .=-+.+.+.|+.
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~ 326 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGE 326 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCC
Confidence 45567889999999999999999999887666543 222446666743
No 160
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=62.31 E-value=10 Score=29.00 Aligned_cols=47 Identities=13% Similarity=0.236 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+=..+.++++|+++|+++++|+.|++.-.+ ...|.+...+...++
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lg 100 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFE 100 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhC
Confidence 44556778899999999999999988853222 136667777777663
No 161
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=62.16 E-value=23 Score=22.11 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEE-EecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIV-LVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~Vi-lvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+- .+=.....+.+.+...++|++..|
T Consensus 51 ~Q~~~~l~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~~~v~~~~f~~~~P 103 (127)
T 3r0p_A 51 VQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYP 103 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTSCGGGEEEEEEEESCGGGHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCCCCC
Confidence 3455667777888889998887754332 344455778888888999964333
No 162
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=61.75 E-value=7.2 Score=26.16 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
.+++.+++++-..+.|++.| .+| .++-|-|+--+|.+-+.+.+.
T Consensus 23 n~~I~~~Ll~gA~~~l~~~G---~~i-~v~~VPGafEiP~aa~~la~~ 66 (157)
T 2i0f_A 23 YDDLADALLDGAKAALDEAG---ATY-DVVTVPGALEIPATISFALDG 66 (157)
T ss_dssp SHHHHHHHHHHHHHHHHHTT---CEE-EEEEESSGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcC---CCe-EEEECCcHHHHHHHHHHHHhh
Confidence 34555666666667777788 466 788899999999997776543
No 163
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=61.37 E-value=10 Score=29.41 Aligned_cols=46 Identities=7% Similarity=0.096 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCcc--ccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGST--RIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGss--riP~V~~~l~~~f 80 (109)
..+=..+..+++|+++|+++++|+.|++.--+. ..|.....|.+.|
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L 120 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLF 120 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHH
Confidence 445577888999999999999999999543222 3566666676544
No 164
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=61.27 E-value=26 Score=21.97 Aligned_cols=49 Identities=10% Similarity=0.187 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~ 81 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+
T Consensus 38 ~~Q~~~~l~nl~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 87 (124)
T 3gtz_A 38 FEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVV 87 (124)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 3444566777788889999988875333 344556678888899999995
No 165
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=61.23 E-value=28 Score=28.82 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecC-ccccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGG-STRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGG-ssriP~V~~~l~~~f~ 81 (109)
+..+=.....+++|+++|+++++||.|++... ...+|.....|...++
T Consensus 688 ~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lG 736 (979)
T 3tsy_A 688 EVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLG 736 (979)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcC
Confidence 34455678899999999999999999887542 2345777777888774
No 166
>3lyb_A Putative endoribonuclease; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.66A {Klebsiella pneumoniae}
Probab=61.16 E-value=21 Score=23.69 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|+...|
T Consensus 70 ~~Qt~~~l~Ni~aiL~~aG~~l~~Vvkvtvyl~d~~df~~~n~v~~~~f~~~~P 123 (165)
T 3lyb_A 70 LAQSWYVLESIRRTVASAGGQMSDVIKLVQYFRNLDHFPYYSRVRKLFYPDQPP 123 (165)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCChhHhEEEEEEECCHHHhHHHHHHHHHHcCCCCC
Confidence 3445566677778888999988876333 3445566788888899999965444
No 167
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=60.76 E-value=12 Score=28.16 Aligned_cols=42 Identities=10% Similarity=0.055 Sum_probs=28.4
Q ss_pred HHHHHHHHHHh-cCCCcccccEEEEecCcc---ccchhhHHHHHHh
Q psy13580 39 GAGALTIVLED-ADMNKKDVDEIVLVGGST---RIPKVQQLVKEFF 80 (109)
Q Consensus 39 ~~~~v~~~l~~-a~~~~~~I~~VilvGGss---riP~V~~~l~~~f 80 (109)
..+.++++|++ +|++++|||.|++--... ..|.+...+...+
T Consensus 36 ~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~l 81 (407)
T 3svk_A 36 VVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAA 81 (407)
T ss_dssp HHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHT
T ss_pred HHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHc
Confidence 45777899999 999999999988732111 1355556676666
No 168
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=60.75 E-value=19 Score=22.43 Aligned_cols=52 Identities=19% Similarity=0.384 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 43 ~Q~~~~l~ni~~~L~~ag~~l~~vvk~~vyl~d~~df~~~n~~~~~~f~~~~P 95 (123)
T 2cwj_A 43 ESAKRALDNLKAIVEGAGYSMDDIVKVTVYITDISRFSEFNEVYREYFNRPYP 95 (123)
T ss_dssp HHHHHHHHHHHHHHHHTSCCGGGCCEEEEEESSSSHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHeEEEEEEEcCHHHHHHHHHHHHHHcCCCCC
Confidence 445567777888899999999887553 3444456778888888888965433
No 169
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=60.51 E-value=26 Score=21.90 Aligned_cols=50 Identities=18% Similarity=0.295 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhccc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSK 83 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~ 83 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+..
T Consensus 48 ~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~~~ 98 (128)
T 1qu9_A 48 AQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEH 98 (128)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCCC
Confidence 344556677778888899988876442 34444667888888899999543
No 170
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=60.12 E-value=19 Score=23.74 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|++..|
T Consensus 80 ~Qt~~~l~ni~~iL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~~~P 132 (156)
T 1xrg_A 80 EQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYP 132 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEEEEEECChHHHHHHHHHHHHHcCCCCC
Confidence 344566777788888999988876443 2344456778888888888965433
No 171
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=59.95 E-value=11 Score=24.32 Aligned_cols=34 Identities=15% Similarity=-0.001 Sum_probs=24.9
Q ss_pred eccCccccCHHHHHHHhHHHHHHHHHHHHHHHHh
Q psy13580 16 TLEPQPSTSPEPREEINHASGLNGAGALTIVLED 49 (109)
Q Consensus 16 ~l~~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~ 49 (109)
+|....++|-.+|.+++...++.+.+.+++...+
T Consensus 2 ~~~~~~~m~e~ef~~lad~~L~~ie~~le~~~d~ 35 (129)
T 3t3l_A 2 TLGHPGSLDETTYERLAEETLDSLAEFFEDLADK 35 (129)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4555678999999999999999999999988766
No 172
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=59.56 E-value=43 Score=27.34 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+.+.+.+.++++.++.+ ++.|+|+||-..-..+++.|.+.+
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l 623 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYL 623 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHh
Confidence 34444555556665555 467999999999999999999876
No 173
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=59.51 E-value=8.4 Score=26.03 Aligned_cols=41 Identities=17% Similarity=0.016 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
|-.+.+.+.+++++++ .|-|+.+||.+--+ ...+.+.+.|+
T Consensus 47 Dd~~~I~~~l~~a~~~-------~DlVittGG~g~~~~D~T~ea~a~~~~ 89 (172)
T 3kbq_A 47 DDLDEIGWAFRVALEV-------SDLVVSSGGLGPTFDDMTVEGFAKCIG 89 (172)
T ss_dssp SCHHHHHHHHHHHHHH-------CSEEEEESCCSSSTTCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhc-------CCEEEEcCCCcCCcccchHHHHHHHcC
Confidence 3455566666666654 47899999988777 47778888773
No 174
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=59.45 E-value=5.4 Score=30.90 Aligned_cols=36 Identities=47% Similarity=0.725 Sum_probs=26.9
Q ss_pred hhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 72 VQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 72 V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
..+.+..++ ......+..++|..+..+++|+|+||+
T Consensus 86 ~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~ 121 (509)
T 2v7y_A 86 PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFN 121 (509)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCC
T ss_pred HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCC
Confidence 345555555 555556777779889999999999986
No 175
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=59.18 E-value=18 Score=24.30 Aligned_cols=46 Identities=17% Similarity=0.114 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHh-cCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 32 NHASGLNGAGALTIVLED-ADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~-a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
.+++.+++++-..+.|++ .|++.++|+ ++-|-|+--+|.+-+.+.+
T Consensus 28 n~~I~~~Ll~ga~~~l~~~~Gv~~~~i~-v~~VPGafEiP~aa~~la~ 74 (159)
T 1kz1_A 28 NLQAIEPLVKGAVETMIEKHDVKLENID-IESVPGSWELPQGIRASIA 74 (159)
T ss_dssp THHHHHHHHHHHHHHHHHHHCCCGGGEE-EEECSSGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccceE-EEECCcHHHHHHHHHHHHh
Confidence 445666666667777778 788877765 7789999999999777754
No 176
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=58.77 E-value=16 Score=25.60 Aligned_cols=45 Identities=20% Similarity=0.235 Sum_probs=32.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
+++.+.+-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+.
T Consensus 15 ~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~ 59 (233)
T 3nwp_A 15 SALEQQLASKIASQLQEAVDARG-----KASLVVSGGSTPLKLFQLLSMK 59 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhc
Confidence 44556666667777777776654 2458899999999988887753
No 177
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=58.65 E-value=30 Score=21.86 Aligned_cols=49 Identities=6% Similarity=0.096 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNS 82 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~ 82 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+.
T Consensus 45 ~Q~~~~l~nl~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 94 (128)
T 3kjj_A 45 EQTADVLAQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAA 94 (128)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhCC
Confidence 334566777888889999988875443 2444556788888889999963
No 178
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=58.42 E-value=8.2 Score=29.47 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
.....++++|+++|++++|||.|..-|-++.+- .=.+.+.+.|+
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~ 354 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFG 354 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhC
Confidence 345788999999999999999999987776543 22244666674
No 179
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=57.93 E-value=23 Score=22.56 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+...|
T Consensus 51 ~~Q~~~~l~ni~~~L~~aG~~l~~vvk~~vyl~d~~d~~~~n~~~~~~f~~~~P 104 (136)
T 1qah_A 51 AEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLP 104 (136)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEccCccHHHHHHHHHHHcCCCCC
Confidence 3445567777888889999988876432 2344456778888888888964334
No 180
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=57.67 E-value=20 Score=22.37 Aligned_cols=52 Identities=10% Similarity=0.137 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|++..|
T Consensus 48 ~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~v~~~~f~~~~P 100 (125)
T 3l7q_A 48 EQTQQVLKNISAILTEAGTDFDHVVKTTCFLSDIDDFVPFNEVYATAFKSDFP 100 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCCCCC
Confidence 344556677778888899888875433 2344455678888888888865333
No 181
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=57.16 E-value=7.8 Score=27.62 Aligned_cols=62 Identities=13% Similarity=0.023 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccc--cchhhHHHHHHhcccchhHHHhhhccchhh
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTR--IPKVQQLVKEFFNSKMKETAEAYLGKKVTH 98 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssr--iP~V~~~l~~~f~~~~~~~a~a~lGaai~~ 98 (109)
+..++++..+.+-..+...-.- +.+.|++.||-+. .|.+.+.+++.+. .+..+... ||+..+
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i~--~~~~~~~~-GAa~la 291 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRLV--APQGDSAQ-GALLLL 291 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHCC--CCSSCHHH-HHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhcc--CCCCCHHH-HHHHHH
Confidence 4456666666666555543322 5577888888764 5677777777652 23333333 666544
No 182
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=56.96 E-value=30 Score=24.26 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..+++.+...+.+++. ++|.|+| |.|.+|.+.+.|++.++
T Consensus 158 ~~~~l~~~~~~~~~~~-----gad~IVL--GCTh~p~l~~~i~~~~g 197 (245)
T 3qvl_A 158 AQEKVRERCIRALKED-----GSGAIVL--GSGGMATLAQQLTRELR 197 (245)
T ss_dssp HHHHHHHHHHHHHHHS-----CCSEEEE--CCGGGGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc-----CCCEEEE--CCCChHHHHHHHHHHcC
Confidence 4444555555555543 3566776 77899999999999984
No 183
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=56.76 E-value=19 Score=23.33 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhcccch
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~~~ 85 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|++..|
T Consensus 66 ~Qt~~~l~ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~~~P 118 (143)
T 3k0t_A 66 AQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFSQPYP 118 (143)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHHHcCCCCC
Confidence 345567777888899999888774332 2344455677788888888854333
No 184
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=56.61 E-value=14 Score=26.21 Aligned_cols=47 Identities=30% Similarity=0.329 Sum_probs=35.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 27 PREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 27 ~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
+.+++.+..-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+.
T Consensus 15 ~~~~l~~~~A~~i~~~i~~a~~~~~-----~~~l~LsgGstP~~~y~~L~~~ 61 (251)
T 3tx2_A 15 DTDALVTAAGDRLASAITGALAERG-----KAMIVLTGGGTGIALLKHLRDV 61 (251)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEECCCchHHHHHHHHHhh
Confidence 4456666777777788888887655 2458899999999999888874
No 185
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=56.22 E-value=10 Score=31.84 Aligned_cols=46 Identities=17% Similarity=0.254 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhh--HHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ--QLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~--~~l~~~f~ 81 (109)
.......++++++++|++++|||.|..-|.+|.+---- +.|.+.|+
T Consensus 285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~ 332 (915)
T 2qo3_A 285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYG 332 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhc
Confidence 34567789999999999999999999999888753221 34566663
No 186
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=56.07 E-value=17 Score=25.30 Aligned_cols=46 Identities=20% Similarity=0.201 Sum_probs=33.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 28 REEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 28 fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
-+++.+.+-+.+.+.+++++++.+. -.+.|.||+|-.+..+.+.+.
T Consensus 11 ~~~l~~~~A~~i~~~i~~~i~~~~~-----~~l~lsgGstp~~~y~~L~~~ 56 (232)
T 3lhi_A 11 AAEAAQSLADAVADALQGALDEKGG-----AVLAVSGGRSPIAFFNALSQK 56 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSC-----EEEEECCSSTTHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-----EEEEEeCCCCHHHHHHHHHhc
Confidence 3455666667777777777776542 458899999999988887653
No 187
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=55.32 E-value=13 Score=26.73 Aligned_cols=48 Identities=23% Similarity=0.289 Sum_probs=35.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 26 EPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 26 ~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
++.+++.+..-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+.
T Consensus 30 ~~~~~l~~~~A~~i~~~i~~ai~~~~-----~~~l~LsgGstP~~~y~~L~~~ 77 (268)
T 3ico_A 30 PDSDILVAAAGKRLVGAIGAAVAARG-----QALIVLTGGGNGIALLRYLSAQ 77 (268)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSHHHHHHHHHHHHH
T ss_pred CCcchhhhhhcchhhhHhHHHHHhcC-----ceEEEEecCCchhHHHHHHHHH
Confidence 34456667777777778888887654 2458899999999999888773
No 188
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=55.03 E-value=13 Score=26.24 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=35.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHH
Q psy13580 27 PREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 27 ~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~ 77 (109)
+.+++.+..-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+
T Consensus 15 ~~~~l~~~~A~~i~~~i~~~~~~~~-----~~~l~LsgGstP~~~y~~L~~ 60 (248)
T 3oc6_A 15 DTAALVAAAGDRLVDAISSAIGERG-----QATIVLTGGGTGIGLLKRVRE 60 (248)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEECCCccHHHHHHHHHh
Confidence 4455666777777788888887655 245889999999999988877
No 189
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=54.12 E-value=38 Score=21.23 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEE-EEecCc-cccchhhHHHHHHhc
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGS-TRIPKVQQLVKEFFN 81 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGs-sriP~V~~~l~~~f~ 81 (109)
.-.+++++.++.+|+.+|.+.++|-.+ +.+-.. ...+.+.+...++|+
T Consensus 51 ~Q~~~~l~ni~~~L~~aG~~~~~vvk~~vyl~d~~~~~~~~~~~~~~~f~ 100 (131)
T 1pf5_A 51 QQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFS 100 (131)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESSGGGTHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCcHHhHHHHHHHHHHHcC
Confidence 345557777888899999988887443 234444 778888899999995
No 190
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=53.96 E-value=31 Score=25.72 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=29.9
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCccccc----EEEEecC
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVD----EIVLVGG 65 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~----~VilvGG 65 (109)
+++.+... ..+..+-.++...++|+++|+++++++ .|++--+
T Consensus 63 i~~~~~~~-~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~ 108 (413)
T 3o04_A 63 LEKKEARK-MDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSG 108 (413)
T ss_dssp SCHHHHTT-SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECS
T ss_pred cCHHHHhh-CCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccc
Confidence 55554432 344555677899999999999999999 6665433
No 191
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=53.76 E-value=5.3 Score=28.35 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=26.8
Q ss_pred cCCCcccccEEEEecCccc------cchhhHHHHHHhcccchhHHHh
Q psy13580 50 ADMNKKDVDEIVLVGGSTR------IPKVQQLVKEFFNSKMKETAEA 90 (109)
Q Consensus 50 a~~~~~~I~~VilvGGssr------iP~V~~~l~~~f~~~~~~~a~a 90 (109)
..+++++.|.|++.||... -+.++++|+++.....+.-++.
T Consensus 99 ~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC 145 (247)
T 3n7t_A 99 GDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVC 145 (247)
T ss_dssp GGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEET
T ss_pred HHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEC
Confidence 4467788999999999743 2556677777764333333333
No 192
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=53.75 E-value=23 Score=25.35 Aligned_cols=38 Identities=18% Similarity=0.481 Sum_probs=27.0
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.+.+++.++. +...++|.|+| |.|.+|.+.+.+++.++
T Consensus 164 ~~~l~~~l~~--l~~~g~D~iVL--GCTh~pll~~~i~~~~~ 201 (269)
T 3ist_A 164 KKVVAESLLP--LKSTKIDTVIL--GCTHYPLLKPIIENFMG 201 (269)
T ss_dssp HHHHHHHHGG--GGGSCCCEEEE--CSTTGGGGHHHHHHHHC
T ss_pred HHHHHHHHHH--HHhCCCCEEEE--CCCCHHHHHHHHHHHcC
Confidence 3444444433 22346788887 89999999999999885
No 193
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=53.50 E-value=4.9 Score=28.62 Aligned_cols=47 Identities=6% Similarity=-0.048 Sum_probs=29.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhcCCCcc-cccEEEEecCcccc--chhhHHHHHH
Q psy13580 30 EINHASGLNGAGALTIVLEDADMNKK-DVDEIVLVGGSTRI--PKVQQLVKEF 79 (109)
Q Consensus 30 ~l~~~~~~~~~~~v~~~l~~a~~~~~-~I~~VilvGGssri--P~V~~~l~~~ 79 (109)
..+..++++..+.+-..+ . +..- +.+.|++.||-++. |.+++.++++
T Consensus 210 ~~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~ 259 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKR 259 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHc
Confidence 445566777777776666 2 3222 55779999987765 5566666554
No 194
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=53.39 E-value=15 Score=28.54 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+=..+..+++|+++|+++++||.|++.--+ -..|...-.|.+.++
T Consensus 54 ~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LG 102 (460)
T 2v4w_A 54 INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhC
Confidence 34456788889999999999999998864322 235667777777774
No 195
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=53.13 E-value=25 Score=25.30 Aligned_cols=36 Identities=17% Similarity=0.440 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.+.+++.++.- . ++|.|+| |.|.+|.+.+.+++.++
T Consensus 184 ~~~~~~~l~~l--~--g~D~iIL--GCTh~PlL~~~i~~~~~ 219 (274)
T 3uhf_A 184 QSAMEYYFKNI--T--TPDALIL--ACTHFPLLGRSLSKYFG 219 (274)
T ss_dssp HHHHHHHHTTC--C--CCSEEEE--CSTTGGGGHHHHHHHHC
T ss_pred HHHHHHHHHHh--c--CCCEEEE--CCCChHHHHHHHHHHcC
Confidence 34444554432 2 6788887 89999999999999884
No 196
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=52.84 E-value=5.3 Score=28.20 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=27.1
Q ss_pred cCCCcccccEEEEecCccc------cchhhHHHHHHhcccchhHHHh
Q psy13580 50 ADMNKKDVDEIVLVGGSTR------IPKVQQLVKEFFNSKMKETAEA 90 (109)
Q Consensus 50 a~~~~~~I~~VilvGGssr------iP~V~~~l~~~f~~~~~~~a~a 90 (109)
..+++++.|.|++.||... -|.++++|++++....+.-++.
T Consensus 92 ~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC 138 (244)
T 3kkl_A 92 NEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAIC 138 (244)
T ss_dssp GGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEET
T ss_pred HHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEC
Confidence 3456788999999999643 3567777877774333333333
No 197
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=52.28 E-value=10 Score=28.73 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEE
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVL 62 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~Vil 62 (109)
+-..+.++++|+++|+++++||.|++
T Consensus 57 ~L~~~Aa~~AL~dAgl~~~~id~v~~ 82 (418)
T 2iik_A 57 ELLSAVMTAVLKDVNLRPEQLGDICV 82 (418)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 33567788999999999999998775
No 198
>2ig8_A Hypothetical protein PA3499; structural genomics, PSI-2, Pro structure initiative; 1.90A {Pseudomonas aeruginosa}
Probab=51.91 E-value=44 Score=21.32 Aligned_cols=48 Identities=25% Similarity=0.313 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHh
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f 80 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|
T Consensus 54 ~~Q~~~~l~ni~~~L~~aG~~l~~vvk~~vyl~d~~df~~~~~v~~~~f 102 (144)
T 2ig8_A 54 HAQALVVLGKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFF 102 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECChHHHHHHHHHHHHHh
Confidence 3445567777888999999988876543 34444567888889999999
No 199
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=51.91 E-value=49 Score=24.36 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=43.4
Q ss_pred ceeeccCccccCHHHHHHHhHHHHHHH------------HHHHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHHH
Q psy13580 13 AVVTLEPQPSTSPEPREEINHASGLNG------------AGALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVKE 78 (109)
Q Consensus 13 ~~i~l~~~~~itr~~fe~l~~~~~~~~------------~~~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~~ 78 (109)
.|+-+--+++++.++|+++..-+.++. ...-++++++ +. .++|.+++||| ||..-++.+.-++
T Consensus 157 ~kv~~vsQTT~s~~~~~~iv~~L~~r~p~~~~~~tIC~AT~~RQ~av~~--la-~~~D~miVVGg~nSSNT~rL~eia~~ 233 (297)
T 3dnf_A 157 ERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKK--LA-PEVDVMIIIGGKNSGNTRRLYYISKE 233 (297)
T ss_dssp SEEEEEECTTCCHHHHHHHHHHHHHHSSEEEEECCCCSHHHHHHHHHHH--HG-GGSSEEEEESCTTCHHHHHHHHHHHH
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHH--HH-hhCCEEEEECCCCCchhHHHHHHHHh
Confidence 456666678999999999999887772 1122222222 22 36899999999 6777777776655
Q ss_pred H
Q psy13580 79 F 79 (109)
Q Consensus 79 ~ 79 (109)
.
T Consensus 234 ~ 234 (297)
T 3dnf_A 234 L 234 (297)
T ss_dssp H
T ss_pred c
Confidence 4
No 200
>3i3f_A Hypothetical protein; structural genomics, niaid, decode, infectious seattle structural genomics center for infectious disease, unknown function; 1.35A {Giardia lamblia}
Probab=51.50 E-value=39 Score=21.55 Aligned_cols=49 Identities=14% Similarity=0.149 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEE-EecCcc---ccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIV-LVGGST---RIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~Vi-lvGGss---riP~V~~~l~~~f~ 81 (109)
..-.+++++.++.+|+.+|.+.++|-.+- .+-... ..+.+.+...++|+
T Consensus 58 ~~Q~~~~l~nl~~~L~~aG~~~~~Vvk~~vyl~d~~~~~df~~~n~v~~~~f~ 110 (141)
T 3i3f_A 58 EEQTRQTFDNIRKCLEYANSGLDYIVSLNIFLSTSLSDSEEARFNELYREVFC 110 (141)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEETTCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCCccccCHHHHHHHHHHHhC
Confidence 44566677888889999999888754432 333344 67788888899993
No 201
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=50.93 E-value=13 Score=24.99 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+++.+++++-..+.|++.|.+ +| .++-|-|+--+|..-+.|.+.|
T Consensus 28 n~~I~~~Ll~gA~~~l~~~G~~--~i-~v~~VPGafEiP~aak~la~~y 73 (160)
T 2c92_A 28 HGKICDALLDGARKVAAGCGLD--DP-TVVRVLGAIEIPVVAQELARNH 73 (160)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCS--CC-EEEEESSGGGHHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHHcCCC--ce-EEEECCcHHHHHHHHHHHHhcC
Confidence 3455666666667777888865 43 4678999999999977776534
No 202
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=50.92 E-value=12 Score=30.15 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=21.9
Q ss_pred HHHHHHHHhcCCCcccccEEEEecC
Q psy13580 41 GALTIVLEDADMNKKDVDEIVLVGG 65 (109)
Q Consensus 41 ~~v~~~l~~a~~~~~~I~~VilvGG 65 (109)
..++.||+++|++++|||.|....+
T Consensus 54 ~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 54 QAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred HHHHHHHHHcCCCHHHCcEEEEECC
Confidence 3577899999999999999998766
No 203
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=50.87 E-value=12 Score=27.97 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
....++++|+++|++++|||.+.+-+-.+.
T Consensus 295 ~~~a~~~al~~Agl~~~dId~ve~h~~ft~ 324 (393)
T 1afw_A 295 PAYAIPKVLEATGLQVQDIDIFEINEAFAA 324 (393)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCHH
Confidence 357889999999999999999999987774
No 204
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=50.55 E-value=10 Score=28.69 Aligned_cols=28 Identities=25% Similarity=0.294 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCcc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGST 67 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGss 67 (109)
...++++|+++|++++|||.+.+-++.+
T Consensus 316 ~~a~~~al~~Agl~~~dId~vE~h~af~ 343 (418)
T 2iik_A 316 AYAIPVALQKAGLTVSDVDIFEINEAFA 343 (418)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEECCSBH
T ss_pred HHHHHHHHHHcCCCHHHCCeeeeeccch
Confidence 4588999999999999999999998655
No 205
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=50.52 E-value=22 Score=25.34 Aligned_cols=25 Identities=28% Similarity=0.638 Sum_probs=21.5
Q ss_pred ccccEEEEecCccccchhhHHHHHHhc
Q psy13580 55 KDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 55 ~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.++|.|+| |.|.+|.+.+.+++.++
T Consensus 179 ~~~D~IVL--GCTh~p~l~~~i~~~~~ 203 (276)
T 2dwu_A 179 EDIDTLIL--GCTHYPLLESYIKKELG 203 (276)
T ss_dssp SCCSEEEE--CSTTGGGGHHHHHHHHC
T ss_pred cCCCEEEE--CCCCHHHHHHHHHHHcC
Confidence 35788887 89999999999999884
No 206
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=50.49 E-value=14 Score=27.54 Aligned_cols=25 Identities=24% Similarity=0.187 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEe
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLV 63 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~Vilv 63 (109)
....++++++++|++++|||.+.+-
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~ 320 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEAN 320 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 3467899999999999999999963
No 207
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=50.18 E-value=41 Score=25.07 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccc----EEEEecC
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVD----EIVLVGG 65 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~----~VilvGG 65 (109)
.+..+-.++.+.++|+++|+++++++ .|++--+
T Consensus 77 d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~ 113 (415)
T 1tqy_B 77 DPSTRLALTAADWALQDAKADPESLTDYDMGVVTANA 113 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECS
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeC
Confidence 44556678899999999999999998 6665433
No 208
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=50.07 E-value=14 Score=27.58 Aligned_cols=29 Identities=24% Similarity=0.132 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCcc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGST 67 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGss 67 (109)
....++++|+++|++++|||.+.+-+-.+
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~heafa 326 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELNEAFA 326 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCSBH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEecchH
Confidence 35789999999999999999999997666
No 209
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=50.01 E-value=43 Score=21.85 Aligned_cols=51 Identities=18% Similarity=0.318 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhccc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFNSK 83 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~~~ 83 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+=.....+.+.+...++|+..
T Consensus 71 ~~Qt~~~l~nl~a~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~~ 122 (153)
T 3vcz_A 71 AAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFDEH 122 (153)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhCCC
Confidence 3445666777888889999888775433 23444567788888899999644
No 210
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=49.14 E-value=11 Score=27.58 Aligned_cols=36 Identities=58% Similarity=0.867 Sum_probs=25.9
Q ss_pred hhHHHHHHhcccchhHHHhhhccchhheeeccccccc
Q psy13580 72 VQQLVKEFFNSKMKETAEAYLGKKVTHAVVTVPAYFK 108 (109)
Q Consensus 72 V~~~l~~~f~~~~~~~a~a~lGaai~~a~lt~p~~f~ 108 (109)
..+.+..++ ......+..++|..+..+++|+|+||+
T Consensus 112 ~~~i~~~~L-~~l~~~a~~~~~~~~~~~vitvP~~~~ 147 (383)
T 1dkg_D 112 PPQISAEVL-KKMKKTAEDYLGEPVTEAVITVPAYFN 147 (383)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHSSCCCEEEECBCTTCC
T ss_pred HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCC
Confidence 345555555 444556666778888999999999985
No 211
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=49.12 E-value=22 Score=26.56 Aligned_cols=42 Identities=17% Similarity=0.089 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccE----EEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDE----IVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~----VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++++ ||. ++.-+++.++ -+.+.+.+
T Consensus 288 ~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i---~~~~~~~l 333 (406)
T 2d3m_A 288 ISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAI---LDQVEAKL 333 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHH---HHHHHHHc
Confidence 345567788999999999987 877 9998887654 35666666
No 212
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=49.11 E-value=13 Score=27.63 Aligned_cols=26 Identities=23% Similarity=0.078 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
....++++|+++|++++|||.+.+--
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~d 317 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEANE 317 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 45789999999999999999999753
No 213
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=49.05 E-value=29 Score=24.29 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..+.+.+.++. . ..++|.|+| |.|.+|.+.+.+++.++
T Consensus 159 ~~~~l~~~~~~--~-~~~~d~iIL--GCTh~p~l~~~i~~~~~ 196 (255)
T 2jfz_A 159 LETCMHYYFTP--L-EILPEVIIL--GCTHFPLIAQKIEGYFM 196 (255)
T ss_dssp HHHHHHHHHTT--C-CSCCSEEEE--ESTTGGGGHHHHHHHHH
T ss_pred HHHHHHHHHhh--h-cCCCCEEEE--cCcChHHHHHHHHHHhC
Confidence 44555566655 2 346888888 89999999999999885
No 214
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=48.98 E-value=32 Score=21.44 Aligned_cols=49 Identities=10% Similarity=0.196 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEE-EEecCccccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEI-VLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~V-ilvGGssriP~V~~~l~~~f~ 81 (109)
..-.+++++.++.+|+.+|.+.++|-.+ +.+-.....+.+.+...++|+
T Consensus 36 ~~Q~~~~l~ni~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 85 (122)
T 3k12_A 36 QDQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFP 85 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhC
Confidence 3445567777888889999988875433 234455567888888888885
No 215
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=48.91 E-value=6.8 Score=27.04 Aligned_cols=38 Identities=11% Similarity=0.192 Sum_probs=25.4
Q ss_pred CCcccccEEEEecCccc----------------cchhhHHHHHHhcccchhHHH
Q psy13580 52 MNKKDVDEIVLVGGSTR----------------IPKVQQLVKEFFNSKMKETAE 89 (109)
Q Consensus 52 ~~~~~I~~VilvGGssr----------------iP~V~~~l~~~f~~~~~~~a~ 89 (109)
+++++.|.|++.||..- -|.+.++|+++.....+.-++
T Consensus 86 ~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaI 139 (232)
T 1vhq_A 86 ADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFM 139 (232)
T ss_dssp CCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEE
T ss_pred cCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEE
Confidence 44567899999999532 467888888887433333333
No 216
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=48.48 E-value=15 Score=30.98 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
.......++++++++|++++|||.|..-|-.|.+- .=-+.|.+.|+
T Consensus 307 ~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg 354 (917)
T 2hg4_A 307 GPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYG 354 (917)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhc
Confidence 34566789999999999999999999999888752 22245566663
No 217
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=48.40 E-value=16 Score=25.99 Aligned_cols=45 Identities=20% Similarity=0.082 Sum_probs=32.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHH
Q psy13580 28 REEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 28 fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~ 77 (109)
-+++.+..-+.+.+.+++++++.+ --.+.|.||+|-.+..+.+.+
T Consensus 13 ~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstP~~ly~~L~~ 57 (266)
T 3eb9_A 13 PQELSAAGCRKIVEIIEASGSQQW-----PLSIALAGGSTPKMTYARLHD 57 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGC-----SEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHH
Confidence 355566666667777777765544 346889999999999888773
No 218
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=48.34 E-value=29 Score=25.75 Aligned_cols=44 Identities=20% Similarity=0.188 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEec--CccccchhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVG--GSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvG--GssriP~V~~~l~~~f~ 81 (109)
=..+.++++|+++|+++++||.+++.- |...-+.+-..+...++
T Consensus 30 L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lg 75 (392)
T 2vu1_A 30 LGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAG 75 (392)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcC
Confidence 356788899999999999999987521 11223455667777763
No 219
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=47.60 E-value=44 Score=25.89 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+++-+.+.++++++..+. +.|++.||-+.-..+++.+.+..
T Consensus 232 ~~~~l~~~~~~a~~~~~~-----~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 232 AFSMLTEITERALAHTNK-----GEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp HHHHHHHHHHHHHHHHTC-----SEEEEESGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC-----CeEEEeCcHHhHHHHHHHHHHHH
Confidence 444455666677776664 67999999999999999999875
No 220
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=47.59 E-value=14 Score=27.52 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecC
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGG 65 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGG 65 (109)
....++++|+++|++++|||.+.+--.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d~ 323 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINEA 323 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecc
Confidence 457899999999999999999996443
No 221
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=47.47 E-value=14 Score=27.43 Aligned_cols=29 Identities=28% Similarity=0.211 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCcc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGST 67 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGss 67 (109)
....++++|+++|++++|||.+.+-+-.+
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~d~f~ 315 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELNEAFA 315 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSBH
T ss_pred HHHHHHHHHHHcCCChhhCcEEEeccCCH
Confidence 35789999999999999999999876554
No 222
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=47.39 E-value=22 Score=27.25 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccc----cchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTR----IPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssr----iP~V~~~l~~~f 80 (109)
-..+.++++|+++|+++++||.|++ |..+. .|.+...+...+
T Consensus 58 La~~Aa~~AL~dAGl~~~~Id~vi~-g~~~~~~~~~~~~a~~va~~l 103 (442)
T 2wu9_A 58 LLAPVLRALIEKTNLNPSEVGDIVV-GTVLAPGSQRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCCEEE-ECCSSBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeecCccCCCChHHHHHHHHc
Confidence 3567788999999999999998775 32221 234555666666
No 223
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=47.37 E-value=15 Score=27.45 Aligned_cols=29 Identities=17% Similarity=0.239 Sum_probs=25.4
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
...++++++++|++++|||.+.+-+-.+.
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h~~f~~ 313 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMNEAFAA 313 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCcchH
Confidence 57889999999999999999998876554
No 224
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=46.93 E-value=15 Score=27.39 Aligned_cols=26 Identities=27% Similarity=0.234 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
....++++++++|++++|||.+.+-.
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d 319 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE 319 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence 35678999999999999999999643
No 225
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=46.71 E-value=16 Score=27.23 Aligned_cols=45 Identities=16% Similarity=0.051 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHHHHhc
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVKEFFN 81 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~~~f~ 81 (109)
+=..+.++++|+++|+++++||.|++.-. ...-|.+...+...++
T Consensus 32 ~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lg 78 (397)
T 1wl4_A 32 DLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcC
Confidence 44667889999999999999999775321 1113556677777763
No 226
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=46.69 E-value=35 Score=25.91 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=33.1
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
.+-+++.++...+-+...+.+++.++++++++++|+.|=.-|
T Consensus 54 ~~~~~~~~l~~~lg~~~a~av~~~l~~~~~~~~~Id~IGsHG 95 (371)
T 3qbx_A 54 DEIARAAEVEQRWVALAAQGVRELLLQQQMSPDEVRAIGSHG 95 (371)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCC
Confidence 455667777777777778899999999999999999875433
No 227
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=46.19 E-value=15 Score=27.62 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCcccc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRI 69 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssri 69 (109)
...++++++++|++++|||.+.+-.-.+..
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hdaf~~~ 337 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEAFASV 337 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeChhHHH
Confidence 467899999999999999999998766554
No 228
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=46.18 E-value=40 Score=24.36 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=27.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
+++.+..-+.+.+.+++++.+ ....-.+.|.||+|-.+..+.+.+.
T Consensus 31 ~~la~~aA~~i~~~i~~a~~~----~~~~~~l~LsgGsTP~~~y~~L~~~ 76 (289)
T 3hn6_A 31 EDISKWAANHVAQKINEFSPT----KENPFILGLPTGSSPIGMYKNLIEL 76 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHCCB----TTBCEEEEECCSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc----cCCcEEEEECCCccHHHHHHHHHHh
Confidence 334444444444554444322 1223568899999999998887764
No 229
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=45.72 E-value=13 Score=27.61 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhcCCCcccccEEEE
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVL 62 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~Vil 62 (109)
....++++|+++|++++|||.+.+
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~ 320 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEV 320 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEE
Confidence 457899999999999999999995
No 230
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=45.60 E-value=18 Score=27.63 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCcccc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRI 69 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssri 69 (109)
....++++|+++|++++|||.+.+-+-.+..
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~h~aft~~ 347 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEINEAFASQ 347 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSBHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeCCChHH
Confidence 3578999999999999999999999987753
No 231
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=45.47 E-value=50 Score=24.93 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCccccc----EEEEecC
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVD----EIVLVGG 65 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~----~VilvGG 65 (109)
..+..+-.++...++|+++|+++++++ .|++--+
T Consensus 95 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~ 132 (437)
T 2gqd_A 95 MDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSG 132 (437)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECS
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeec
Confidence 345556678889999999999999999 7776433
No 232
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=45.38 E-value=34 Score=25.33 Aligned_cols=43 Identities=19% Similarity=0.124 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecC---ccccchhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGG---STRIPKVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGG---ssriP~V~~~l~~~f~ 81 (109)
-..+.++++|+++|+++++||.+++ |- ...-|.....+...++
T Consensus 35 l~~~a~~~Al~dAgl~~~~id~~~~-g~~~~~~~~~~~a~~va~~lg 80 (395)
T 2ib8_A 35 LGSIAIQGAIEKAGIPKEEVKEAYM-GNVLQGGEGQAPTRQAVLGAG 80 (395)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCTTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCchHHHHHHHHcC
Confidence 4667788999999999999998765 32 1223455566666663
No 233
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=45.25 E-value=8.8 Score=25.68 Aligned_cols=30 Identities=30% Similarity=0.451 Sum_probs=21.5
Q ss_pred CCcccccEEEEecCccc-----cchhhHHHHHHhc
Q psy13580 52 MNKKDVDEIVLVGGSTR-----IPKVQQLVKEFFN 81 (109)
Q Consensus 52 ~~~~~I~~VilvGGssr-----iP~V~~~l~~~f~ 81 (109)
+++++.|.+++.||... -|.+.++++++..
T Consensus 65 v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~ 99 (177)
T 4hcj_A 65 VDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLD 99 (177)
T ss_dssp CCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHH
T ss_pred CCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHHH
Confidence 45678899999999542 3566777777763
No 234
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=45.17 E-value=8.6 Score=24.80 Aligned_cols=28 Identities=25% Similarity=0.482 Sum_probs=20.0
Q ss_pred cccccEEEEecCcc-----ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST-----RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss-----riP~V~~~l~~~f~ 81 (109)
+.+.|.|++.||.. .-|.+.++|++...
T Consensus 61 ~~~~D~livpGG~~~~~~~~~~~l~~~l~~~~~ 93 (168)
T 3l18_A 61 PDEFDALVLPGGKAPEIVRLNEKAVMITRRMFE 93 (168)
T ss_dssp GGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhCCEEEECCCcCHHHhccCHHHHHHHHHHHH
Confidence 45689999999963 34566777777764
No 235
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=43.91 E-value=18 Score=26.94 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhc-CCCcccccEEEEecCcc---ccchhhHHHHHHh
Q psy13580 38 NGAGALTIVLEDA-DMNKKDVDEIVLVGGST---RIPKVQQLVKEFF 80 (109)
Q Consensus 38 ~~~~~v~~~l~~a-~~~~~~I~~VilvGGss---riP~V~~~l~~~f 80 (109)
-..+.++++|+++ |+++++||.|++.-... .-+.+-..+...+
T Consensus 33 L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~l 79 (390)
T 1wdk_C 33 MSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMT 79 (390)
T ss_dssp HHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHc
Confidence 3567889999999 99999999877531111 1144556666666
No 236
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=43.72 E-value=42 Score=24.03 Aligned_cols=39 Identities=18% Similarity=0.406 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..+.+.+.++.- ...++|.|+| |.|.+|.+.+.+++.++
T Consensus 182 ~~~~l~~~l~~l--~~~g~D~IVL--GCTh~p~l~~~i~~~l~ 220 (290)
T 2vvt_A 182 AKKIVAETLQAL--QLKGLDTLIL--GCTHYPLLRPVIQNVMG 220 (290)
T ss_dssp HHHHHHHHHGGG--TTSCCSEEEE--CSTTGGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHH--HhCCCCEEEE--CCcCHHHHHHHHHHHcC
Confidence 344455555332 2346888888 88999999999999884
No 237
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=43.53 E-value=56 Score=24.32 Aligned_cols=41 Identities=7% Similarity=0.004 Sum_probs=29.8
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCccccc----EEEEe
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADMNKKDVD----EIVLV 63 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~----~Vilv 63 (109)
.+++.+.. ...+..+-.++...++|+++|+++++++ .|++-
T Consensus 65 ~~~~~~~~-~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g 109 (416)
T 1e5m_A 65 FLDRKEAK-RMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIG 109 (416)
T ss_dssp TSCHHHHH-TSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEE
T ss_pred cCCHHHHH-hcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEe
Confidence 35554443 3456667788999999999999999998 45543
No 238
>1c41_A Lumazine synthase; riboflavin biosynthesis, transferase; HET: LMZ; 3.10A {Magnaporthe grisea} SCOP: c.16.1.1
Probab=49.44 E-value=5 Score=28.11 Aligned_cols=53 Identities=13% Similarity=0.025 Sum_probs=36.6
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
-|-..+| ..++.+.+++-..+.|.+.|+..++|+ |+-|-|+--+|..-+.|.+
T Consensus 19 aIV~arf---n~~I~~~Ll~GA~~~L~~~Gv~~~~I~-v~~VPGa~ElP~a~~~l~~ 71 (200)
T 1c41_A 19 GIVHARW---NETIIEPLLAGTKAKLLACGVKESNIV-VQSVPGSWELPIAVQRLYS 71 (200)
Confidence 3444555 344555666666677778888777766 6678999999998666544
No 239
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=43.05 E-value=20 Score=26.74 Aligned_cols=26 Identities=27% Similarity=0.240 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
....++++++++|++++|||.+.+-.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d 322 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE 322 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 45678999999999999999999644
No 240
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=42.23 E-value=43 Score=25.40 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=33.0
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccc-c----EEEEecCccccchhhHH
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDV-D----EIVLVGGSTRIPKVQQL 75 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I-~----~VilvGGssriP~V~~~ 75 (109)
+++.+... ..+..+-.++...++|+++|++++++ + .|++--+...++.+.+.
T Consensus 91 i~~~~~~~-~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~ 147 (451)
T 4ddo_A 91 VPHKELRK-MDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEA 147 (451)
T ss_dssp SCHHHHTT-SCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHH
T ss_pred CCHHHHhh-CCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHH
Confidence 56655433 34555667889999999999999998 6 45543333333433333
No 241
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=42.22 E-value=13 Score=26.81 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=24.7
Q ss_pred CcccccEEEEecCccc------cchhhHHHHHHhcccchhHHHh
Q psy13580 53 NKKDVDEIVLVGGSTR------IPKVQQLVKEFFNSKMKETAEA 90 (109)
Q Consensus 53 ~~~~I~~VilvGGssr------iP~V~~~l~~~f~~~~~~~a~a 90 (109)
++++.|.|++.||... -|.+.++|+++.....+.-++.
T Consensus 142 ~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC 185 (291)
T 1n57_A 142 ADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLC 185 (291)
T ss_dssp TTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEET
T ss_pred CcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEEC
Confidence 5678899999999432 2567788888774333333333
No 242
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=41.55 E-value=11 Score=26.09 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=22.7
Q ss_pred CCcccccEEEEecCcc------ccchhhHHHHHHhcccch
Q psy13580 52 MNKKDVDEIVLVGGST------RIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 52 ~~~~~I~~VilvGGss------riP~V~~~l~~~f~~~~~ 85 (109)
+++++.|.|++.||.. .-|.+.++|+++.....+
T Consensus 94 v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~ 133 (243)
T 1rw7_A 94 VNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGV 133 (243)
T ss_dssp CCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCE
T ss_pred CCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCE
Confidence 3456789999999953 235677777777643333
No 243
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=41.37 E-value=71 Score=20.70 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
+.+.+.++++|+++|+.+.+|..+--+---..=|.+.+.-+++
T Consensus 25 ~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~l 67 (145)
T 2w6k_A 25 EHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLL 67 (145)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHh
Confidence 3466778899999999999999998887777777777766665
No 244
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=41.03 E-value=66 Score=21.29 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
.+++.+++++-..+.|++.|.+.++|+ ++-|-|+--+|..-+.+.+
T Consensus 23 n~~I~~~Ll~ga~~~l~~~gv~~~~i~-v~~VPGafEiP~aa~~la~ 68 (154)
T 1rvv_A 23 NDFITSKLLSGAEDALLRHGVDTNDID-VAWVPGAFEIPFAAKKMAE 68 (154)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCGGGEE-EEEESSGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceE-EEECCcHHHHHHHHHHHHh
Confidence 445666677777788888998776654 5678999999999777654
No 245
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=40.58 E-value=45 Score=24.80 Aligned_cols=43 Identities=5% Similarity=-0.193 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcC----CCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDAD----MNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~----~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+..+++|+++| +++++||.|++--.. ...|.....+...++
T Consensus 39 a~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lG 87 (393)
T 1afw_A 39 LYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASG 87 (393)
T ss_dssp HHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcC
Confidence 5677889999999 999999987753221 123445566666663
No 246
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=40.42 E-value=12 Score=25.43 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=22.1
Q ss_pred cccccEEEEecCcc------ccchhhHHHHHHhcccch
Q psy13580 54 KKDVDEIVLVGGST------RIPKVQQLVKEFFNSKMK 85 (109)
Q Consensus 54 ~~~I~~VilvGGss------riP~V~~~l~~~f~~~~~ 85 (109)
+.+.|.|++.||.. .-|.+.++|++++....+
T Consensus 87 ~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~ 124 (224)
T 1u9c_A 87 AHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRI 124 (224)
T ss_dssp GSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCE
T ss_pred hhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCE
Confidence 45789999999953 235677888887743333
No 247
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=39.98 E-value=22 Score=30.06 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHhc
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFFN 81 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f~ 81 (109)
.....++++++++|++++|||.|..-|=+|..- .=-+.|.+.|+
T Consensus 270 ~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~ 315 (965)
T 3hhd_A 270 IQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALC 315 (965)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhc
Confidence 455789999999999999999999998887654 22345666774
No 248
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=39.97 E-value=12 Score=24.57 Aligned_cols=28 Identities=21% Similarity=0.489 Sum_probs=20.7
Q ss_pred cccccEEEEecCc------cccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGS------TRIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGs------sriP~V~~~l~~~f~ 81 (109)
..+.|.|++.||. ..-|.+.++|++.+.
T Consensus 73 ~~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~ 106 (190)
T 2vrn_A 73 VSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYD 106 (190)
T ss_dssp GGGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhCCEEEECCCchhHHHHhhCHHHHHHHHHHHH
Confidence 3577999999995 235667788888774
No 249
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=39.68 E-value=8.9 Score=27.06 Aligned_cols=32 Identities=28% Similarity=0.658 Sum_probs=24.0
Q ss_pred CCCcccccEEEEecCcc-----------------ccchhhHHHHHHhcc
Q psy13580 51 DMNKKDVDEIVLVGGST-----------------RIPKVQQLVKEFFNS 82 (109)
Q Consensus 51 ~~~~~~I~~VilvGGss-----------------riP~V~~~l~~~f~~ 82 (109)
.+++++.|.|++.||.. .-|.+.++|+++...
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~ 150 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNA 150 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHT
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHc
Confidence 34567889999999963 237788888888743
No 250
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=39.25 E-value=79 Score=23.66 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccE
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDE 59 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~ 59 (109)
.+..+-.++...++|+++|+++++++.
T Consensus 91 d~~~~l~l~aa~~AL~dAG~~~~~i~~ 117 (430)
T 1ox0_A 91 DNYSLYALYAAQEAVNHANLDVEALNR 117 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCTTTSCG
T ss_pred CHHHHHHHHHHHHHHHHcCCChhhcCc
Confidence 345566788999999999999999983
No 251
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=39.00 E-value=36 Score=25.82 Aligned_cols=43 Identities=16% Similarity=0.133 Sum_probs=34.1
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
..+-+++.++...+-+...+.+++.++++++++++|+.|=.-|
T Consensus 57 ~~~~~~~~~l~~~lg~~~a~av~~~l~~~~~~~~~i~~IGsHG 99 (370)
T 3cqy_A 57 TDEINRLGRLDRSVGKLFALAVNNLLAKTKIAKDEIIAIGSHG 99 (370)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCC
Confidence 3445667777777888888999999999999999988776554
No 252
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=38.91 E-value=45 Score=25.41 Aligned_cols=36 Identities=6% Similarity=-0.178 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
.-.++.+.+.++++++++|++++|||.+++--..++
T Consensus 237 ~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k 272 (425)
T 3sqz_A 237 KQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPK 272 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcch
Confidence 345667778899999999999999999998764444
No 253
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=38.59 E-value=52 Score=27.28 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.+.+.+.++.++.++ +.|+|.||-..-..+++.|.+.+
T Consensus 678 a~~L~~~~~~a~~~~g~-----~~VvLsGGVa~N~~Lr~~L~~~l 717 (761)
T 3vth_A 678 VNFTYDLANLIRKETGI-----NKVVLSGGSFQNRYLLRRLIEKL 717 (761)
T ss_dssp HHHHHHHHHHHHHHHCC-----CEEEEESGGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-----CEEEEECcHHHHHHHHHHHHHHH
Confidence 33344555555555554 67999999999999999998875
No 254
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=38.16 E-value=67 Score=21.24 Aligned_cols=46 Identities=22% Similarity=0.141 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
.+++.+++++-..+.|++.|.+.++|+ ++-|-|+--+|..-+.|.+
T Consensus 23 n~~I~~~Ll~ga~~~l~~~gv~~~~i~-v~~VPGafEiP~aa~~la~ 68 (154)
T 1hqk_A 23 NHALVDRLVEGAIDCIVRHGGREEDIT-LVRVPGSWEIPVAAGELAR 68 (154)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCGGGEE-EEEESSGGGHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceE-EEECCcHHHHHHHHHHHHh
Confidence 445666677777788888998776654 5678999999998776653
No 255
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=37.84 E-value=50 Score=21.95 Aligned_cols=46 Identities=17% Similarity=0.124 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
.+++.+++++-..+.|++.|.+.++| .++-|-|+--+|.+-+.|.+
T Consensus 21 n~~I~~~Ll~gA~~~l~~~gv~~~~i-~v~~VPGafEiP~aa~~la~ 66 (158)
T 1di0_A 21 HADIVDEARKSFVAELAAKTGGSVEV-EIFDVPGAYEIPLHAKTLAR 66 (158)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSEEE-EEEEESSGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccce-EEEECCcHHHHHHHHHHHHh
Confidence 34556666666677777788776665 46678999999999777654
No 256
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=37.75 E-value=63 Score=24.08 Aligned_cols=36 Identities=6% Similarity=0.091 Sum_probs=26.7
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccE
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDE 59 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~ 59 (109)
+++.+.. ...+..+-.++...++|+++|+++++++.
T Consensus 62 i~~~~~~-~~d~~~~l~l~aa~~AL~dAG~~~~~i~~ 97 (424)
T 1tqy_A 62 FGPRELD-RMDRASQFAVACAREAFAASGLDPDTLDP 97 (424)
T ss_dssp CCHHHHH-HSCHHHHHHHHHHHHHHHHHTCCTTTCCG
T ss_pred CCHHHHH-hcCHHHHHHHHHHHHHHHHCCCCchhcCC
Confidence 4444433 34556666888999999999999999983
No 257
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=37.64 E-value=54 Score=24.51 Aligned_cols=31 Identities=10% Similarity=-0.084 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
-.++.+.+.++++++++|++++|||.+++--
T Consensus 209 ~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 209 TYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 3456677888999999999999999998865
No 258
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=37.58 E-value=79 Score=23.65 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=26.6
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccE
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDE 59 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~ 59 (109)
+++.+... ..+..+-.++...++|+++|+++++++.
T Consensus 77 i~~~~~~~-~d~~~~l~l~aa~~AL~dAGl~~~~i~~ 112 (427)
T 3ho9_A 77 ISRKEQRK-MDAFIQYGIVAGVQAMQDSGLEITEENA 112 (427)
T ss_dssp SCHHHHTT-SCHHHHHHHHHHHHHHHHHTCCCCTTTG
T ss_pred CCHHHHhh-CCHHHHHHHHHHHHHHHHCCCCcccccc
Confidence 56655433 3345556778899999999999999984
No 259
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=37.09 E-value=66 Score=22.63 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
..+.+.+.++.. ... +|.|+| |.|.+|.+.+.+++.++
T Consensus 170 ~~~~l~~~~~~l--~~~-~d~iVL--GCTh~p~l~~~i~~~~~ 207 (273)
T 2oho_A 170 AKKIVYDSLAPL--VGK-IDTLVL--GCTHYPLLRPIIQNVMG 207 (273)
T ss_dssp HHHHHHHHHTTT--TTS-CSEEEE--CSTTGGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHH--Hhc-CCEEEE--cCCCHHHHHHHHHHHhC
Confidence 445555555543 223 787777 78999999999999884
No 260
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=37.01 E-value=16 Score=24.71 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f 80 (109)
|-.+.+.+.+++++++ .+.|-|+.+||++-- =...+.+++.+
T Consensus 61 Dd~~~I~~al~~a~~~-----~~~DlVIttGGtg~g~~D~t~eal~~~~ 104 (189)
T 1jlj_A 61 DEIEEIKETLIDWCDE-----KELNLILTTGGTGFAPRDVTPEATKEVI 104 (189)
T ss_dssp SCHHHHHHHHHHHHHT-----SCCSEEEEESCCSSSTTCCHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhhc-----CCCCEEEEcCCCCCCCcccHHHHHHHHh
Confidence 3445555666665542 235789999998654 34567777664
No 261
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=36.99 E-value=45 Score=25.35 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=25.2
Q ss_pred HHHHHHHHHHH------hcCCCcccccEEEEecCccccc
Q psy13580 38 NGAGALTIVLE------DADMNKKDVDEIVLVGGSTRIP 70 (109)
Q Consensus 38 ~~~~~v~~~l~------~a~~~~~~I~~VilvGGssriP 70 (109)
.+.+.++++++ ++|++++|||.+++-++..++.
T Consensus 215 ~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~~~~i~ 253 (450)
T 2f82_A 215 ALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLV 253 (450)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCSSHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCChhhcCEEEecCChHHHH
Confidence 33345555554 8999999999999999988764
No 262
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=36.53 E-value=12 Score=24.77 Aligned_cols=29 Identities=31% Similarity=0.532 Sum_probs=21.6
Q ss_pred CcccccEEEEecCc----cccchhhHHHHHHhc
Q psy13580 53 NKKDVDEIVLVGGS----TRIPKVQQLVKEFFN 81 (109)
Q Consensus 53 ~~~~I~~VilvGGs----sriP~V~~~l~~~f~ 81 (109)
++++.|.|++.||. ..-|.+.++|++...
T Consensus 60 ~~~~~D~livpGG~~~~~~~~~~l~~~l~~~~~ 92 (188)
T 2fex_A 60 DPVDIDALVIPGGLSWEKGTAADLGGLVKRFRD 92 (188)
T ss_dssp CTTTCSEEEECCBSHHHHTCCCCCHHHHHHHHH
T ss_pred CcccCCEEEECCCCcccccccHHHHHHHHHHHH
Confidence 34578999999995 245778888888874
No 263
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=36.35 E-value=27 Score=26.26 Aligned_cols=24 Identities=29% Similarity=0.314 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhcCCCcccccEEEE
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVL 62 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~Vil 62 (109)
..+.+++.|+++|++++|+|.|+-
T Consensus 209 A~~ti~~~l~d~g~~~~d~D~ivt 232 (347)
T 3lma_A 209 AADTIKQHLEDLGRTPDDYDLILT 232 (347)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHhCCCHHHcCEEec
Confidence 557799999999999999999884
No 264
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=36.16 E-value=32 Score=19.76 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhcccchhHH
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNSKMKETA 88 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~~~~~~~a 88 (109)
+++...+++.|+.+.+.. .-.-.|++.|++.||+.++..-
T Consensus 15 ~ei~~~I~~IL~~aDL~t------------vT~K~VR~~Le~~~pg~dLs~k 54 (70)
T 1q1v_A 15 EELKETIKKLLASANLEE------------VTMKQICKKVYENYPTYDLTER 54 (70)
T ss_dssp HHHHHHHHHHHTTSCGGG------------CCHHHHHHHHHHHCSSSCCSHH
T ss_pred HHHHHHHHHHHHhCCHHH------------HhHHHHHHHHHHHccCCCChHH
Confidence 345666777777766543 2345688999999976665543
No 265
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=35.79 E-value=13 Score=24.97 Aligned_cols=41 Identities=24% Similarity=0.364 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
..+.+.+.+++++++ .+.|-|+.+||++--+ ...+.+++.+
T Consensus 65 d~~~I~~al~~a~~~-----~~~DlVittGG~s~g~~D~t~eal~~~~ 107 (178)
T 2pjk_A 65 DKIKILKAFTDALSI-----DEVDVIISTGGTGYSPTDITVETIRKLF 107 (178)
T ss_dssp CHHHHHHHHHHHHTC-----TTCCEEEEESCCSSSTTCCHHHHHGGGC
T ss_pred CHHHHHHHHHHHHhc-----CCCCEEEECCCCCCCCCcchHHHHHHHh
Confidence 344455555555432 2368899999988766 3666676665
No 266
>3lme_A Possible translation initiation inhibitor; structural genomics, RPA2473, PSI-2, protein structure initiative; 2.74A {Rhodopseudomonas palustris} SCOP: d.79.1.0
Probab=35.65 E-value=38 Score=21.55 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEE-EecCcccc-chhhHHHHHHhcc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIV-LVGGSTRI-PKVQQLVKEFFNS 82 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~Vi-lvGGssri-P~V~~~l~~~f~~ 82 (109)
-.+++++.++.+|+.+|.+.++|-.+- .+=..... +.+.+...++|+.
T Consensus 51 Q~~~~l~ni~~~L~~aG~~l~~Vvk~~vyl~d~~d~~~~~n~v~~~~f~~ 100 (138)
T 3lme_A 51 RIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGD 100 (138)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHHHHcCC
Confidence 467788889999999999888753332 22222233 3566777788853
No 267
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=35.60 E-value=52 Score=23.13 Aligned_cols=24 Identities=29% Similarity=0.686 Sum_probs=20.6
Q ss_pred cccEEEEecCccccchhhHHHHHHhc
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
++|.|+| |.|.+|.+.+.+++.++
T Consensus 176 ~~d~iVL--GCTh~p~l~~~i~~~~~ 199 (267)
T 2gzm_A 176 DIDTLIL--GCTHYPILGPVIKQVMG 199 (267)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHC
T ss_pred CCCEEEE--cccChHHHHHHHHHHcC
Confidence 5677877 89999999999999884
No 268
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=35.08 E-value=81 Score=23.43 Aligned_cols=46 Identities=11% Similarity=0.123 Sum_probs=30.7
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCC-Cccccc----EEEEecCccc
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADM-NKKDVD----EIVLVGGSTR 68 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~-~~~~I~----~VilvGGssr 68 (109)
.+++.+... ..+..+-.++...++|+++|+ ++++++ .|++-.+.+.
T Consensus 65 ~i~~~~~~~-~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~ 115 (412)
T 4ewg_A 65 DWPRKKTRS-MGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGS 115 (412)
T ss_dssp TSCHHHHTT-CCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCC
T ss_pred hCCHHHHhh-CCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCc
Confidence 356655433 344555678899999999999 777887 6666444333
No 269
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=34.96 E-value=33 Score=26.66 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhh
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQ 73 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~ 73 (109)
....+.+...++++|++ ++++|||.|..+-|....+.++
T Consensus 51 ~~h~~~l~~~i~~~l~~--~~~~~id~ia~~~gPG~~~~l~ 89 (540)
T 3en9_A 51 DHHAETFPKLIKEAFEV--VDKNEIDLIAFSQGPGLGPSLR 89 (540)
T ss_dssp HHHHHHHHHHHHHHHHH--SCGGGCCEEEEEEESSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCHhHCcEEEEecCCCchhhHH
Confidence 45667778888899988 8999999999998888777654
No 270
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=34.49 E-value=48 Score=25.44 Aligned_cols=44 Identities=16% Similarity=0.110 Sum_probs=25.3
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
++..++-.+|.+.+ ...++++..+.. .+++|||+.. +++.++..
T Consensus 67 ~~~~~s~~~F~~~a-------~~~i~~i~~~g~-------~pilVGGTgl--Yi~aLl~g 110 (409)
T 3eph_A 67 WSEEYYSHRFETEC-------MNAIEDIHRRGK-------IPIVVGGTHY--YLQTLFNK 110 (409)
T ss_dssp TTSCCCHHHHHHHH-------HHHHHHHHTTTC-------EEEEECSCGG--GGGGGGTC
T ss_pred hHhHhhHHHHHHHH-------HHHHHHHHhcCC-------CEEEECChHH--HHHHHHcc
Confidence 34456666665555 444555544433 3789999865 55555533
No 271
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=34.16 E-value=75 Score=23.48 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=27.3
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccE
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDE 59 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~ 59 (109)
.+++.+.. ...+..+-.++...++|+++|+++++++.
T Consensus 59 ~~~~~~~~-~~d~~~~l~~~aa~~AL~dAGl~~~~id~ 95 (408)
T 1j3n_A 59 YLDRKELR-RLDRFVQYALIAAQLALEDAGLKPEDLDP 95 (408)
T ss_dssp TSCHHHHT-TSCHHHHHHHHHHHHHHHHHTCCGGGSCG
T ss_pred cCCHHHHH-hcCHHHHHHHHHHHHHHHHcCCCccccCC
Confidence 35555443 24456666788999999999999999985
No 272
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=34.03 E-value=90 Score=20.68 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
.+++.+++++-..+.|++.|++ ++| .++-|-|+--+|.+-+.+.+.
T Consensus 24 n~~I~~~Ll~ga~~~l~~~Gv~-~~i-~v~~VPGafEiP~aa~~la~~ 69 (156)
T 1c2y_A 24 NEFVTRRLMEGALDTFKKYSVN-EDI-DVVWVPGAYELGVTAQALGKS 69 (156)
T ss_dssp THHHHHHHHHHHHHHHHHTTCC-SCC-EEEEESSHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHcCCC-Cce-EEEECCcHHHHHHHHHHHHhc
Confidence 4556667777777888889987 554 467889999999997777543
No 273
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=33.87 E-value=21 Score=23.40 Aligned_cols=42 Identities=14% Similarity=0.095 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCcccc--chhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI--PKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri--P~V~~~l~~~f 80 (109)
|..+.+.+.++++++. .+.|-|+.+||++-- =.+.+.+++.+
T Consensus 54 Dd~~~i~~~l~~~~~~-----~~~DlVittGG~g~g~~D~t~~a~~~~~ 97 (167)
T 1uuy_A 54 DEVERIKDILQKWSDV-----DEMDLILTLGGTGFTPRDVTPEATKKVI 97 (167)
T ss_dssp SCHHHHHHHHHHHHHT-----SCCSEEEEESCCSSSTTCCHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-----CCCCEEEECCCCCCCCCCchHHHHHHHh
Confidence 3445555555555532 235789999998654 45667777776
No 274
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=33.81 E-value=77 Score=22.48 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=23.9
Q ss_pred HHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHH
Q psy13580 41 GALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 41 ~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~ 78 (109)
+.+++.++. +...++|.|+| |.|.+|.+.+.+++
T Consensus 165 ~~l~~~l~~--l~~~g~D~iIL--GCTh~pll~~~i~~ 198 (268)
T 3out_A 165 LVAKEYLSY--FHDKNIQALIL--GCTHYPIIKESIAK 198 (268)
T ss_dssp HHHHHHHGG--GTTSCCSEEEE--CSTTGGGGHHHHHH
T ss_pred HHHHHHHHH--HHhCCCCEEEE--CCCChHHHHHHHhc
Confidence 344444433 22356888888 89999999999987
No 275
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=33.12 E-value=58 Score=26.04 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCcccccEEEEec--Cccccc
Q psy13580 33 HASGLNGAGALTIVLEDA--DMNKKDVDEIVLVG--GSTRIP 70 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a--~~~~~~I~~VilvG--GssriP 70 (109)
.+.++++.+..+++.... |.+...++.|+.+| ||..-|
T Consensus 123 ~~~l~~m~~fa~~vr~g~~~g~~g~~i~~VV~IGIGGS~LGp 164 (557)
T 2cxn_A 123 NRVLDKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGP 164 (557)
T ss_dssp HHHHHHHHHHHHHHHTTCSBCTTSCBCCEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCccceEEEEeccchHHHH
Confidence 456777777777775542 67777899999876 555555
No 276
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.99 E-value=12 Score=24.30 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=19.7
Q ss_pred CcccccEEEEecC--c--c-------ccchhhHHHHHHhc
Q psy13580 53 NKKDVDEIVLVGG--S--T-------RIPKVQQLVKEFFN 81 (109)
Q Consensus 53 ~~~~I~~VilvGG--s--s-------riP~V~~~l~~~f~ 81 (109)
++.+.|.+++.|| . . .-|.+.++|+++..
T Consensus 63 ~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~ 102 (175)
T 3cne_A 63 HEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGE 102 (175)
T ss_dssp CGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHH
T ss_pred CcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHH
Confidence 3466799999999 3 2 23556677777763
No 277
>1sbx_A SKI oncogene, C-SKI; winged helix, forkhead, oncoprotein; 1.65A {Homo sapiens} SCOP: a.6.1.4
Probab=32.33 E-value=21 Score=22.44 Aligned_cols=17 Identities=12% Similarity=-0.050 Sum_probs=14.2
Q ss_pred cccCHHHHHHHhHHHHH
Q psy13580 21 PSTSPEPREEINHASGL 37 (109)
Q Consensus 21 ~~itr~~fe~l~~~~~~ 37 (109)
.-|||++||.++.+++.
T Consensus 89 gLItk~DaerL~~~ll~ 105 (106)
T 1sbx_A 89 GLITKTDAERLCNALLY 105 (106)
T ss_dssp EEEEHHHHHHHHHHHHC
T ss_pred CceeHHHHHHHHHHHhc
Confidence 36899999999998763
No 278
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=32.15 E-value=20 Score=23.63 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCCCcccccEEEEecCccccch--hhHHHHHHh
Q psy13580 37 LNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPK--VQQLVKEFF 80 (109)
Q Consensus 37 ~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~--V~~~l~~~f 80 (109)
+.+.+.++++++ ++.|-|+.+||++--+. ..+.+++.+
T Consensus 53 ~~i~~al~~a~~------~~~DlVittGG~s~g~~D~t~eal~~~~ 92 (164)
T 3pzy_A 53 SPVGEALRKAID------DDVDVILTSGGTGIAPTDSTPDQTVAVV 92 (164)
T ss_dssp HHHHHHHHHHHH------TTCSEEEEESCCSSSTTCCHHHHHHTTC
T ss_pred HHHHHHHHHHHh------CCCCEEEECCCCCCCCCccHHHHHHHHh
Confidence 455555555553 14688999999987763 667777665
No 279
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=31.74 E-value=43 Score=25.85 Aligned_cols=26 Identities=31% Similarity=0.489 Sum_probs=23.8
Q ss_pred ccccEEEEecCcc-ccchhhHHHHHHh
Q psy13580 55 KDVDEIVLVGGST-RIPKVQQLVKEFF 80 (109)
Q Consensus 55 ~~I~~VilvGGss-riP~V~~~l~~~f 80 (109)
..+|.|+++||-. .-+.||+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 6799999999999 9999999998875
No 280
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=31.59 E-value=99 Score=21.76 Aligned_cols=24 Identities=21% Similarity=0.679 Sum_probs=20.9
Q ss_pred cccEEEEecCccccchhhHHHHHHhc
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
++|.|+| |.|.+|.+.+.+++.++
T Consensus 177 ~~D~iVL--GCTh~pll~~~i~~~~~ 200 (272)
T 1zuw_A 177 SIDSLIL--GCTHYPILKEAIQRYMG 200 (272)
T ss_dssp CCSEEEE--ESTTGGGGHHHHHHHHC
T ss_pred CCCEEEE--CccCHHHHHHHHHHHcC
Confidence 5788887 89999999999999884
No 281
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=31.54 E-value=90 Score=22.20 Aligned_cols=38 Identities=18% Similarity=0.403 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.+.+++.++... ..++|.|+| |.|.+|.+.+.+++.++
T Consensus 182 ~~~l~~~~~~l~--~~g~D~IVL--GCTh~p~l~~~i~~~l~ 219 (286)
T 2jfq_A 182 SIVIHQTLKRWR--NSESDTVIL--GCTHYPLLYKPIYDYFG 219 (286)
T ss_dssp HHHHHHHHGGGT--TCSCSEEEE--ESSSGGGGHHHHHHHTT
T ss_pred HHHHHHHHHHHH--hCCCCEEEE--cCcCHHHHHHHHHHHcC
Confidence 344455554432 246788888 78999999999999884
No 282
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=31.44 E-value=72 Score=25.46 Aligned_cols=39 Identities=21% Similarity=0.144 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHHHHh--cCCCcccccEEEEec--Cccccc
Q psy13580 32 NHASGLNGAGALTIVLED--ADMNKKDVDEIVLVG--GSTRIP 70 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~--a~~~~~~I~~VilvG--GssriP 70 (109)
+.+.++++.+..+++... .|.+...++.|+.+| ||..-|
T Consensus 116 v~~~l~~i~~fa~~vr~g~~~g~~g~~i~~VV~IGIGGS~LGp 158 (549)
T 2wu8_A 116 VHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGP 158 (549)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCSSSCBCCEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCccceEEEEeccchHHHH
Confidence 356677888888777543 566777899999876 555545
No 283
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=31.27 E-value=52 Score=23.43 Aligned_cols=25 Identities=28% Similarity=0.482 Sum_probs=21.5
Q ss_pred ccccEEEEecCccccchhhHHHHHHhc
Q psy13580 55 KDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 55 ~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.++|.|+| |.|.+|.+.+.+++.++
T Consensus 195 ~~~D~IVL--GCTh~p~l~~~i~~~lg 219 (285)
T 2jfn_A 195 EPPDTVVL--GCTHFPLLQEELLQVLP 219 (285)
T ss_dssp SCCSEEEE--CSTTGGGGHHHHHHHSC
T ss_pred CCCCEEEE--eCCCcHHHHHHHHHhcC
Confidence 45788887 89999999999999884
No 284
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=31.15 E-value=27 Score=23.25 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
+.|..+.+.+.+++++++ .+.|-|+.+||.+--+ ...+.+++.+
T Consensus 49 v~Dd~~~I~~~l~~~~~~-----~~~DlVittGG~g~g~~D~t~ea~~~~~ 94 (178)
T 2pbq_A 49 IPDERDLIEKTLIELADE-----KGCSLILTTGGTGPAPRDVTPEATEAVC 94 (178)
T ss_dssp ECSCHHHHHHHHHHHHHT-----SCCSEEEEESCCSSSTTCCHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHhc-----CCCCEEEECCCCCCCCCCchHHHHHHHh
Confidence 344455566666666542 1458899999987654 4567777775
No 285
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=31.07 E-value=64 Score=21.41 Aligned_cols=47 Identities=19% Similarity=0.158 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
..++.+++++-..+.|++.|++.++|+ ++-|-|+--+|.+-+.|.+.
T Consensus 22 n~~I~~~Ll~gA~~~l~~~Gv~~~~i~-v~~VPGafEiP~aa~~la~~ 68 (157)
T 2obx_A 22 HADIVDQCVSAFEAEMADIGGDRFAVD-VFDVPGAYEIPLHARTLAET 68 (157)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSEEEE-EEEESSGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceE-EEECCcHHHHHHHHHHHHhc
Confidence 345566666666777777887766554 56789999999997776543
No 286
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=31.06 E-value=32 Score=26.88 Aligned_cols=28 Identities=21% Similarity=0.165 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhcCCCcccccEEEEecC
Q psy13580 38 NGAGALTIVLEDADMNKKDVDEIVLVGG 65 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~~~~I~~VilvGG 65 (109)
-....++++++++|++++|||.+.+-..
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~dA 345 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLYSC 345 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEeCC
Confidence 3456789999999999999999999863
No 287
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=30.81 E-value=80 Score=22.46 Aligned_cols=45 Identities=24% Similarity=0.251 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCc--cccchhhHHHHHHhc
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGS--TRIPKVQQLVKEFFN 81 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs--sriP~V~~~l~~~f~ 81 (109)
..+-..+..+++|+++|+ ++|+.|++.-.+ ...|.....+...++
T Consensus 53 ~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lg 99 (331)
T 2x3e_A 53 SGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLG 99 (331)
T ss_dssp HHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhC
Confidence 344567888999999999 899987764332 225656677777774
No 288
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=30.69 E-value=14 Score=24.59 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=20.6
Q ss_pred CcccccEEEEecCcc------ccchhhHHHHHHhc
Q psy13580 53 NKKDVDEIVLVGGST------RIPKVQQLVKEFFN 81 (109)
Q Consensus 53 ~~~~I~~VilvGGss------riP~V~~~l~~~f~ 81 (109)
++.+.|.|++.||.. .-|.+.++|++...
T Consensus 63 ~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~~ 97 (197)
T 2rk3_A 63 KEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEN 97 (197)
T ss_dssp TTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CccCCCEEEECCCchhHHHhhhCHHHHHHHHHHHH
Confidence 346779999999952 24667778887764
No 289
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=30.47 E-value=24 Score=21.89 Aligned_cols=23 Identities=9% Similarity=-0.109 Sum_probs=18.2
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHH
Q psy13580 23 TSPEPREEINHASGLNGAGALTI 45 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~ 45 (109)
+|-.+|.+++...++.+.+.+++
T Consensus 1 m~~~ef~~lad~~l~~ie~~le~ 23 (106)
T 1ew4_A 1 MNDSEFHRLADQLWLTIEERLDD 23 (106)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh
Confidence 46788999998888888777764
No 290
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=30.34 E-value=96 Score=22.04 Aligned_cols=38 Identities=18% Similarity=0.385 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccccchhhHH----HHHHh
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQL----VKEFF 80 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~----l~~~f 80 (109)
...++..++..++++++|+.|++ ||-.|.+.+. ++++|
T Consensus 41 ~~~l~~ll~~~~~~~~~I~~iiI---SSVvp~~~~~l~~~~~~~~ 82 (266)
T 3djc_A 41 GIFLKSVLRENNCSPETIRKIAI---CSVVPQVDYSLRSACVKYF 82 (266)
T ss_dssp HHHHHHHHHTTTCCGGGCCEEEE---EESCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhhceEEEE---ecchHhHHHHHHHHHHHHc
Confidence 34556677788889999998876 4555655544 44555
No 291
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=30.30 E-value=52 Score=24.37 Aligned_cols=47 Identities=19% Similarity=0.110 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHhcCCC-cccccEEEEecCccccch-hhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMN-KKDVDEIVLVGGSTRIPK-VQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~-~~~I~~VilvGGssriP~-V~~~l~~~f 80 (109)
..+++....+-+.+...-.. ..+.+.|++.||-+..+. +.+.+.+.+
T Consensus 272 ~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l 320 (381)
T 1saz_A 272 RVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRV 320 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHH
Confidence 34444444444444332111 135688999999876544 667777766
No 292
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=30.19 E-value=78 Score=25.66 Aligned_cols=38 Identities=18% Similarity=0.088 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHh--cCCCcccccEEEEec--Cccccc
Q psy13580 33 HASGLNGAGALTIVLED--ADMNKKDVDEIVLVG--GSTRIP 70 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~--a~~~~~~I~~VilvG--GssriP 70 (109)
.+.++++.+..+++... .|.+...++.|+.+| ||..-|
T Consensus 171 ~~~l~~i~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp 212 (613)
T 2o2c_A 171 NKVLDQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGP 212 (613)
T ss_dssp HHHHHHHHHHHHHHHHTCSBCTTSCBCCEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCceeeEEEEeccchHHHH
Confidence 56777888888887655 267778899999876 555555
No 293
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=30.17 E-value=40 Score=25.21 Aligned_cols=63 Identities=11% Similarity=0.194 Sum_probs=40.3
Q ss_pred eeeccCccccCHHHHHHHhHHHHHHHHH--------------HHHHHHHhcCCCcccccEEEEecC--ccccchhhHHHH
Q psy13580 14 VVTLEPQPSTSPEPREEINHASGLNGAG--------------ALTIVLEDADMNKKDVDEIVLVGG--STRIPKVQQLVK 77 (109)
Q Consensus 14 ~i~l~~~~~itr~~fe~l~~~~~~~~~~--------------~v~~~l~~a~~~~~~I~~VilvGG--ssriP~V~~~l~ 77 (109)
|+-+--+++++.++|+++..-+-++.-+ .-+++++ .+. .++|.+++||| ||..-++.+.-+
T Consensus 172 kv~~vsQTT~s~~~~~~iv~~L~~r~p~i~~~~~ntIC~AT~~RQ~av~--~lA-~~vD~miVVGg~nSSNT~rL~eia~ 248 (328)
T 3szu_A 172 KLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVR--ALA-EQAEVVLVVGSKNSSNSNRLAELAQ 248 (328)
T ss_dssp SEEEEECTTSCHHHHHHHHHHHHHHCTTCBCCSSCSCCHHHHHHHHHHH--HHH-HHCSEEEEECCTTCHHHHHHHHHHH
T ss_pred eEEEEEecCCcHHHHHHHHHHHHHhCcccccCCCCCcCHHHHHHHHHHH--HHH-HhCCEEEEeCCCCCchHHHHHHHHH
Confidence 4555567899999999988877766321 1111111 121 35899999999 667667766655
Q ss_pred HH
Q psy13580 78 EF 79 (109)
Q Consensus 78 ~~ 79 (109)
+.
T Consensus 249 ~~ 250 (328)
T 3szu_A 249 RM 250 (328)
T ss_dssp HT
T ss_pred Hh
Confidence 44
No 294
>3eq5_A SKI-like protein; TGF-beta, SIG protein, structural genomics, SGC stockholm, structural GEN consortium, SGC; 2.45A {Homo sapiens}
Probab=29.76 E-value=24 Score=22.79 Aligned_cols=16 Identities=6% Similarity=-0.128 Sum_probs=13.7
Q ss_pred cccCHHHHHHHhHHHH
Q psy13580 21 PSTSPEPREEINHASG 36 (109)
Q Consensus 21 ~~itr~~fe~l~~~~~ 36 (109)
.-|||.++|+||..++
T Consensus 106 gLITk~DaErLc~~ll 121 (125)
T 3eq5_A 106 GLITLTDAQRLCNALL 121 (125)
T ss_dssp EEEEHHHHHHHHHHHH
T ss_pred cceeHHHHHHHHHHhc
Confidence 3689999999998876
No 295
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=29.69 E-value=18 Score=24.57 Aligned_cols=29 Identities=17% Similarity=0.294 Sum_probs=19.8
Q ss_pred CcccccEEEEecCcc----ccchhhHHHHHHhc
Q psy13580 53 NKKDVDEIVLVGGST----RIPKVQQLVKEFFN 81 (109)
Q Consensus 53 ~~~~I~~VilvGGss----riP~V~~~l~~~f~ 81 (109)
++++.|.|++.||.. .-|.+.++|++...
T Consensus 71 ~~~~~D~livpGG~~~~~~~~~~l~~~l~~~~~ 103 (212)
T 3efe_A 71 TLESKDLLILPGGTTWSEEIHQPILERIGQALK 103 (212)
T ss_dssp CCCTTCEEEECCCSCTTSGGGHHHHHHHHHHHH
T ss_pred CccCCCEEEECCCCccccccCHHHHHHHHHHHH
Confidence 345789999999964 23456667776663
No 296
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=29.52 E-value=95 Score=23.25 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=26.7
Q ss_pred ccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCccc-cc
Q psy13580 22 STSPEPREEINHASGLNGAGALTIVLEDADMNKKD-VD 58 (109)
Q Consensus 22 ~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~-I~ 58 (109)
.+++.+.+. ..+..+-.++...++|++||+++++ ++
T Consensus 75 ~i~~~~~~~-~d~~~~l~l~aa~~AL~dAGl~~~~~id 111 (428)
T 3kzu_A 75 HMDPKEQRK-VDPFIVYAVGAADQALDDAGWHPENDED 111 (428)
T ss_dssp TSCHHHHTT-SCHHHHHHHHHHHHHHHHHTCCCCSHHH
T ss_pred cCCHHHHHh-CCHHHHHHHHHHHHHHHhcCCChhhhcc
Confidence 356665443 3455566788999999999999998 77
No 297
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=29.30 E-value=22 Score=23.62 Aligned_cols=28 Identities=21% Similarity=0.497 Sum_probs=19.1
Q ss_pred cccccEEEEecCcc-----ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST-----RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss-----riP~V~~~l~~~f~ 81 (109)
.++.|.|++.||.. .-|.+.++|++.+.
T Consensus 84 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~ 116 (193)
T 1oi4_A 84 PAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVN 116 (193)
T ss_dssp GGGCSEEEECCBTHHHHHTTSHHHHHHHHHHHH
T ss_pred cccCCEEEECCCcCHHHhhhCHHHHHHHHHHHH
Confidence 35679999999943 23556677777763
No 298
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=29.28 E-value=61 Score=22.81 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCC--cccccEEEEecCccccchhhHHHH
Q psy13580 38 NGAGALTIVLEDADMN--KKDVDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 38 ~~~~~v~~~l~~a~~~--~~~I~~VilvGGssriP~V~~~l~ 77 (109)
+..+.+.+.|++.|+. .++.|.|+.+||-.-+=.+-+.+.
T Consensus 15 ~~~~~l~~~l~~~g~~v~~~~~D~vv~lGGDGT~l~aa~~~~ 56 (272)
T 2i2c_A 15 LLRLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYE 56 (272)
T ss_dssp HHHHHHHHHHTTSSCEECSSSCSEEEEEESHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHCCCEeCCCCCCEEEEEcCcHHHHHHHHHHh
Confidence 3445556667777764 567899999999776665544443
No 299
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=28.86 E-value=80 Score=25.54 Aligned_cols=38 Identities=21% Similarity=0.120 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHh--cCCCcccccEEEEec--Cccccc
Q psy13580 33 HASGLNGAGALTIVLED--ADMNKKDVDEIVLVG--GSTRIP 70 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~--a~~~~~~I~~VilvG--GssriP 70 (109)
.+.++++.+..+++... .|.+...++.|+.+| ||..-|
T Consensus 170 ~~~l~~i~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp 211 (605)
T 1t10_A 170 NNVLAQMKDFTERVRSGEWKGQTGKSIYNIVNIGIGGSDLGP 211 (605)
T ss_dssp HHHHHHHHHHHHHHHHSCSBCTTSCBCCEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCccceEEEEeccchHHHH
Confidence 56777888888887655 267778899999876 555555
No 300
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=28.77 E-value=62 Score=26.82 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
+.+.+.++.++.| ++.|+|.||-..--.+++.+.+.+
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L 729 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVV 729 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHG
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHH
Confidence 4455566666555 466999999999999999998875
No 301
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=28.73 E-value=1.1e+02 Score=21.61 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHH
Q psy13580 40 AGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 40 ~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~ 77 (109)
...+.+.++..++++.+|+.|++ ||-.|.+.+.++
T Consensus 40 ~~~l~~ll~~~~~~~~~i~~iiI---SSVvp~~~~~l~ 74 (268)
T 2h3g_X 40 GMLVKQLLEHEGLSFEDVKGIIV---SSVVPPIMFALE 74 (268)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEE---EESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCcEEEE---EccChhHHHHHH
Confidence 34456677778888889999887 566676655544
No 302
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=28.39 E-value=32 Score=22.45 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
|..+.+.+.+++++++. +.|-|+.+||++--| ...+.+++.+
T Consensus 45 Dd~~~i~~~l~~~~~~~-----~~DlVittGG~g~g~~D~t~ea~~~~~ 88 (164)
T 2is8_A 45 DEPPMIKKVLRLWADRE-----GLDLILTNGGTGLAPRDRTPEATRELL 88 (164)
T ss_dssp SCHHHHHHHHHHHHHTS-----CCSEEEEESCCSSSTTCCHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcC-----CCCEEEEcCCCCCCCCCChHHHHHHHh
Confidence 44455566666665421 358899999986553 4667777765
No 303
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=28.27 E-value=61 Score=25.04 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
.+.++.+.+.++++++++++++++|..|=+.|
T Consensus 50 ~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis~ 81 (526)
T 3ezw_A 50 MEIWATQSSTLVEVLAKADISSDQIAAIGITN 81 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhEEEEEEeC
Confidence 45778888999999999999999988776544
No 304
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=27.95 E-value=68 Score=21.05 Aligned_cols=15 Identities=40% Similarity=0.408 Sum_probs=11.5
Q ss_pred cccEEEEecC-ccccc
Q psy13580 56 DVDEIVLVGG-STRIP 70 (109)
Q Consensus 56 ~I~~VilvGG-ssriP 70 (109)
.+..|||.|| ++|++
T Consensus 14 ~~~~iILA~G~g~Rmg 29 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG 29 (201)
T ss_dssp CCEEEEEEESSCCCCS
T ss_pred CceEEEECCCCCccCC
Confidence 4678999988 56775
No 305
>1gzs_B SOPE; toxin/cell cycle, complex (toxin/cell cycle protein), SOPE, CDC42, salmonella typhimurium, GEF, toxin, lipoprotein; 2.3A {Salmonella typhimurium} SCOP: a.168.1.1 PDB: 1r9k_A 1r6e_A
Probab=27.88 E-value=1.3e+02 Score=19.81 Aligned_cols=41 Identities=10% Similarity=0.136 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHH
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEF 79 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~ 79 (109)
.+..+-++-+.+|+..++=+.|+.-||...-|+|-.++...
T Consensus 65 flkeiGeAA~naGLPGe~KngVFtPsGaGanPfv~~li~sa 105 (165)
T 1gzs_B 65 FLQEIGEAAKNAGLPGTTKNDVFTPSGAGANPFITPLISSA 105 (165)
T ss_dssp HHHHHHHHHHHTTCCEEEETTEEEETTCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCCccCCCCCCCCchhhHHhhHH
Confidence 34455666788999999999999999999999999887655
No 306
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=27.65 E-value=66 Score=23.86 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=21.1
Q ss_pred CccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 19 PQPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 19 ~~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
++..++-.+|.+. ....+++.+.+.+ .+++|||+..
T Consensus 68 ~~e~~s~~~F~~~-------a~~~i~~i~~~gk-------~pIlVGGTgl 103 (322)
T 3exa_A 68 PSESFSVADFQDL-------ATPLITEIHERGR-------LPFLVGGTGL 103 (322)
T ss_dssp TTSCCCHHHHHHH-------HHHHHHHHHHTTC-------EEEEESCCHH
T ss_pred hhhhccHHHHHHH-------HHHHHHHHHhCCC-------cEEEEcCcHH
Confidence 3445666666444 4455555555433 3789999854
No 307
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=27.63 E-value=33 Score=22.45 Aligned_cols=41 Identities=15% Similarity=0.172 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
|..+.+.+.+++++++ +.|-|+.+||.+--| ...+.+.+.+
T Consensus 53 Dd~~~I~~~l~~a~~~------~~DlVittGG~g~~~~D~t~ea~~~~~ 95 (167)
T 2g2c_A 53 EGYDTVVEAIATALKQ------GARFIITAGGTGIRAKNQTPEATASFI 95 (167)
T ss_dssp SSHHHHHHHHHHHHHT------TCSEEEEESCCSSSTTCCHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhC------CCCEEEECCCCCCCCCcChHHHHHHHh
Confidence 3445556666665542 258899999987654 3556666665
No 308
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=27.39 E-value=57 Score=24.48 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccc----EEEEe
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVD----EIVLV 63 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~----~Vilv 63 (109)
+..+-....++++|+++|+++++++ .|++-
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g 124 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMG 124 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEc
Confidence 4555677889999999999999998 45553
No 309
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=26.99 E-value=71 Score=19.83 Aligned_cols=35 Identities=3% Similarity=-0.015 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
|+++++.+.+++.+....+.+.+ ++|-.++ |.+.|
T Consensus 14 PlY~QI~~~i~~~I~~G~l~pG~-----------~LPser~-La~~~ 48 (134)
T 4ham_A 14 PIYEQIVQKIKEQVVKGVLQEGE-----------KILSIRE-FASRI 48 (134)
T ss_dssp CHHHHHHHHHHHHHHHTSSCTTC-----------EECCHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCC-----------CCccHHH-HHHHH
Confidence 67888899999999999988854 8887766 45555
No 310
>3h38_A TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=26.86 E-value=56 Score=25.18 Aligned_cols=37 Identities=27% Similarity=0.264 Sum_probs=25.1
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHH
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLV 76 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l 76 (109)
+.-+.+-+..++..+.+..+++|.. +++|||+ ||+.|
T Consensus 12 ~~~lp~~~~~~l~~l~~~~~~~G~~------aylVGG~-----VRD~L 48 (441)
T 3h38_A 12 VERVDPKILNLFRLLGKFGDEVNMP------VYVVGGF-----VRDLL 48 (441)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHTTCC------EEEETHH-----HHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHcCCe------EEEEcHH-----HHHHH
Confidence 3334456667777777777888863 7899986 55555
No 311
>3d01_A Uncharacterized protein; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; HET: PG5; 1.70A {Agrobacterium tumefaciens str}
Probab=26.54 E-value=1.1e+02 Score=19.95 Aligned_cols=55 Identities=7% Similarity=0.083 Sum_probs=33.0
Q ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCcccccEEEE----ecCccccch----hh---HHHHHHhcc
Q psy13580 24 SPEPREEINHASGLNGAGALTIVLEDAD-MNKKDVDEIVL----VGGSTRIPK----VQ---QLVKEFFNS 82 (109)
Q Consensus 24 tr~~fe~l~~~~~~~~~~~v~~~l~~a~-~~~~~I~~Vil----vGGssriP~----V~---~~l~~~f~~ 82 (109)
+.+++++.. +++++.++.+|+.+| .+.++|..|+- +-.....+. +. +...++|+.
T Consensus 69 ~~~d~~~Qa----~~~l~ni~~~L~~ag~~~l~~v~~Vvk~tvyv~d~~df~~~~~v~ngas~~~~~~f~~ 135 (165)
T 3d01_A 69 DVASAQRAA----ELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGE 135 (165)
T ss_dssp CHHHHHHHH----HHHHHHHHHHHHHHTTTCGGGCCEEEEEEEEEEBCTTCCCHHHHHHHHHHHHHHHHCG
T ss_pred CcccHHHHH----HHHHHHHHHHHHHhCCCChhhhCCEEEEEEEECCHHHhhHHHHHhhhHHHHHHHHhCC
Confidence 345665544 445556667788888 88886555552 222334444 34 677888854
No 312
>2dzr_A General transcription factor II-I repeat domain- containing protein 1; RSGI RUH-067, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.35 E-value=35 Score=21.09 Aligned_cols=17 Identities=29% Similarity=0.601 Sum_probs=15.1
Q ss_pred CccccchhhHHHHHHhc
Q psy13580 65 GSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 65 GssriP~V~~~l~~~f~ 81 (109)
|||-+-.+|+.++++|+
T Consensus 1 ~~~~~~~LReqVe~lFn 17 (99)
T 2dzr_A 1 GSSGSSGLREQVQDLFN 17 (99)
T ss_dssp CCCCCCSHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHH
Confidence 68888999999999993
No 313
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=26.10 E-value=29 Score=26.12 Aligned_cols=28 Identities=29% Similarity=0.573 Sum_probs=20.0
Q ss_pred cccccEEEEecCcc-----ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST-----RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss-----riP~V~~~l~~~f~ 81 (109)
+.+.|.|++.||.. .-|.+.++|++...
T Consensus 71 ~~~~DaLiVPGG~g~~~l~~~~~l~~~Lr~~~~ 103 (365)
T 3fse_A 71 ASEFDAVVIPGGMAPDKMRRNPNTVRFVQEAME 103 (365)
T ss_dssp GGGCSEEEECCBTHHHHHTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCcchhhccCCHHHHHHHHHHHH
Confidence 44678999999963 34567777777764
No 314
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=25.90 E-value=16 Score=24.06 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=19.5
Q ss_pred cccccEEEEecCcc------ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST------RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss------riP~V~~~l~~~f~ 81 (109)
+.+.|.|++.||.. .-|.+.++|++...
T Consensus 65 ~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~ 98 (190)
T 4e08_A 65 SDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQES 98 (190)
T ss_dssp TCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred cccCCEEEECCCChHHHHhhhCHHHHHHHHHHHH
Confidence 34678999999942 34567777877764
No 315
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=25.89 E-value=69 Score=23.78 Aligned_cols=36 Identities=6% Similarity=0.081 Sum_probs=26.8
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccE
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDE 59 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~ 59 (109)
+++.+.. ...+..+-.++...++|+++|+++++++.
T Consensus 60 ~~~~~~~-~~d~~~~l~l~aa~~Al~dAg~~~~~i~~ 95 (406)
T 2vba_A 60 IDRKVVR-FMSDASIYAFLSMEQAIADAGLSPEAYQN 95 (406)
T ss_dssp SCHHHHT-TCCHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred CCHHHHH-hcCHHHHHHHHHHHHHHHHCCCChhHcCC
Confidence 5655443 34556666788999999999999988875
No 316
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=25.75 E-value=1.7e+02 Score=20.25 Aligned_cols=26 Identities=15% Similarity=0.339 Sum_probs=18.9
Q ss_pred cccEEEEecCccccchhhHHHHHHhc
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
+.+.|++.||-+..|.+.+.+++.+.
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~ 264 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLE 264 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCC
Confidence 34678888887766777777777764
No 317
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=25.64 E-value=66 Score=24.54 Aligned_cols=26 Identities=15% Similarity=0.385 Sum_probs=21.9
Q ss_pred ccccEEEEecCcc-ccchhhHHHHHHh
Q psy13580 55 KDVDEIVLVGGST-RIPKVQQLVKEFF 80 (109)
Q Consensus 55 ~~I~~VilvGGss-riP~V~~~l~~~f 80 (109)
..+|.|+++||-. .-+.+++.+.+.+
T Consensus 312 ~gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 312 NKLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCCEEEECCccccCcHHHHHHHHhhc
Confidence 3799999999977 6688999888774
No 318
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=25.43 E-value=51 Score=22.87 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=28.2
Q ss_pred HhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHH
Q psy13580 31 INHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 31 l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~ 77 (109)
+.+...+.+.+.+++++++.+- ..+.|.||+|-.+..+.+.+
T Consensus 25 l~~~aA~~i~~~i~~~~~~~~~-----~~l~LsgGsTp~~ly~~L~~ 66 (232)
T 1vl1_A 25 YVDFVVEKIRTKMEKLLEEKDK-----IFVVLAGGRTPLPVYEKLAE 66 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSC-----EEEEECCSTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-----eEEEEcCCccHHHHHHHHHH
Confidence 4444555566666666665432 45889999999998877654
No 319
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=25.30 E-value=37 Score=22.27 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
.+.+.+.+++++++ .+.|-|+.+||.+--| ...+.+++.+
T Consensus 57 ~~~i~~~l~~~~~~-----~~~DlVittGG~g~g~~D~t~ea~~~~~ 98 (169)
T 1y5e_A 57 KESIQQAVLAGYHK-----EDVDVVLTNGGTGITKRDVTIEAVSALL 98 (169)
T ss_dssp HHHHHHHHHHHHTC-----TTCSEEEEECCCSSSTTCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHhc-----CCCCEEEEcCCCCCCCCCCcHHHHHHHc
Confidence 34455555555431 2458899999986554 4556676665
No 320
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=25.19 E-value=1.1e+02 Score=23.89 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=23.5
Q ss_pred CcccccEEEEecCcc-ccchhhHHHHHHh
Q psy13580 53 NKKDVDEIVLVGGST-RIPKVQQLVKEFF 80 (109)
Q Consensus 53 ~~~~I~~VilvGGss-riP~V~~~l~~~f 80 (109)
.+..+|.|+++||-. +-+.+++.+.+.+
T Consensus 349 ~~G~vDaIVFTGGIGEns~~iR~~i~~~l 377 (438)
T 4h0p_A 349 PIESIDGLVFSGGIGEKGAELRRDVLKKL 377 (438)
T ss_dssp CGGGSCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred cCCCCCEEEECCccccCcHHHHHHHHHhH
Confidence 345799999999975 8899999988775
No 321
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=25.18 E-value=21 Score=24.10 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=20.4
Q ss_pred cccccEEEEecCcc------ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST------RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss------riP~V~~~l~~~f~ 81 (109)
+++.|.|++.||.. .-|.+.++|++.+.
T Consensus 69 ~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~ 102 (208)
T 3ot1_A 69 AEAFDALALPGGVGGAQAFADSTALLALIDAFSQ 102 (208)
T ss_dssp GGGCSEEEECCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCCCEEEECCCchHHHHHhhCHHHHHHHHHHHH
Confidence 45779999999952 34667778877774
No 322
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=25.08 E-value=21 Score=23.74 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=18.2
Q ss_pred cccccEEEEecCccc-----------cchhhHHHHHHh
Q psy13580 54 KKDVDEIVLVGGSTR-----------IPKVQQLVKEFF 80 (109)
Q Consensus 54 ~~~I~~VilvGGssr-----------iP~V~~~l~~~f 80 (109)
..+.|.+++.||.+. .+.+.++|++..
T Consensus 39 ~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~ 76 (213)
T 3d54_D 39 LDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAA 76 (213)
T ss_dssp CSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHH
T ss_pred cccCCEEEECCCCchhhhhccccccccHHHHHHHHHHH
Confidence 467899999999652 234556666655
No 323
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=24.82 E-value=24 Score=27.10 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=21.2
Q ss_pred ccccEEEEecCcc-ccchhhHHHHHHh
Q psy13580 55 KDVDEIVLVGGST-RIPKVQQLVKEFF 80 (109)
Q Consensus 55 ~~I~~VilvGGss-riP~V~~~l~~~f 80 (109)
.++|.|+++||-+ +-+.+++.+.+.+
T Consensus 322 G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 322 GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred CCCcEEEECCccccccHHHHHHHHHHH
Confidence 5789999999977 4577888887764
No 324
>2otm_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.85A {Shewanella oneidensis} SCOP: d.79.1.1
Probab=24.80 E-value=91 Score=20.19 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCc-------cccchh----hHHHHHHhc
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGS-------TRIPKV----QQLVKEFFN 81 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGs-------sriP~V----~~~l~~~f~ 81 (109)
.+++...+..+|+.+|.+.++++.|+-+.+- ..+|.+ .+...++|+
T Consensus 69 a~~~~~Ni~a~L~~ag~~l~~~~~VVk~tvyv~d~~df~~~~~v~~~~~~~~~~~fg 125 (154)
T 2otm_A 69 CRLATLNAIAQLKQACGELSRIKQIYRLEGVLNVHQSCIEHPKALDGASDLLLEIFG 125 (154)
T ss_dssp HHHHHHHHHHHHHHHHSSGGGCCEEEEEEEEECBCTTCCCHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEEEEECCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 4556666677778888888887777755432 122222 366778885
No 325
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=24.21 E-value=1.3e+02 Score=23.28 Aligned_cols=38 Identities=3% Similarity=-0.041 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHh----cCCCcccccEEEEecCcccc
Q psy13580 32 NHASGLNGAGALTIVLED----ADMNKKDVDEIVLVGGSTRI 69 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~----a~~~~~~I~~VilvGGssri 69 (109)
+.+.+++..+.++++|++ +|++++|+|.+++----.||
T Consensus 218 l~~~~~~y~~~~~~~l~~~~~~~gl~~~did~~v~Hqan~ri 259 (460)
T 2v4w_A 218 LDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKM 259 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEEEECCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccCCCHHHhceEeecCCchHH
Confidence 334444455557888888 99999999999997655554
No 326
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=24.20 E-value=1.4e+02 Score=21.88 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhcCCC-cccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMN-KKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~-~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++ .++| .+++-.+..+ +-+.+.+.+
T Consensus 271 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~---i~~~~~~~l 313 (387)
T 3a5r_A 271 ISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPA---ILDQVTAKV 313 (387)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHH---HHHHHHHHc
Confidence 3555667889999999998 8888 6777777543 345566666
No 327
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=23.90 E-value=43 Score=22.64 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
.+.+.+.+++++. ++.|-|+.+||++--| ...+.+++.+
T Consensus 75 ~~~I~~al~~a~~------~~~DlVIttGGts~g~~D~t~eal~~l~ 115 (185)
T 3rfq_A 75 EVDIRNALNTAVI------GGVDLVVSVGGTGVTPRDVTPESTREIL 115 (185)
T ss_dssp HHHHHHHHHHHHH------TTCSEEEEESCCSSSTTCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHh------CCCCEEEECCCCCCCCcccHHHHHHHHh
Confidence 3445555555442 3468899999998766 3666666664
No 328
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=23.74 E-value=74 Score=23.50 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=19.3
Q ss_pred ccccCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCcc
Q psy13580 20 QPSTSPEPREEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGST 67 (109)
Q Consensus 20 ~~~itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGss 67 (109)
+..++-.+|.+ .....+++...+..+ .++|||+.
T Consensus 76 ~e~~s~~~f~~-------~a~~~i~~i~~~g~~-------pilVGGTg 109 (316)
T 3foz_A 76 SQAYSAADFRR-------DALAEMADITAAGRI-------PLLVGGTM 109 (316)
T ss_dssp TSCCCHHHHHH-------HHHHHHHHHHHTTCE-------EEEEESCH
T ss_pred cccccHHHHHH-------HHHHHHHHHHhCCCc-------EEEEcCcH
Confidence 34455555543 344555555554332 68999985
No 329
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=23.73 E-value=27 Score=23.63 Aligned_cols=27 Identities=26% Similarity=0.536 Sum_probs=20.4
Q ss_pred ccccEEEEecCcc---ccchhhHHHHHHhc
Q psy13580 55 KDVDEIVLVGGST---RIPKVQQLVKEFFN 81 (109)
Q Consensus 55 ~~I~~VilvGGss---riP~V~~~l~~~f~ 81 (109)
++.|.|++.||.. .-|.+.++|++...
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~ 91 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQ 91 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHH
Confidence 4789999999954 35677788887764
No 330
>2bye_A Phospholipase C, epsilon 1; RAS association domain, ubiquitin superfold; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=23.69 E-value=58 Score=20.52 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 39 GAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 39 ~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
+.+.++++|..++...++++.-+|+=
T Consensus 34 Akdvl~qaL~ka~~~~~~~~~YvL~E 59 (110)
T 2bye_A 34 AKQLLQQILTNEQDIKPVTTDYFLME 59 (110)
T ss_dssp HHHHHHHHHCCSSSSCCCCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCcccEEEEE
Confidence 56788899999999999999888853
No 331
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=23.65 E-value=44 Score=22.79 Aligned_cols=29 Identities=24% Similarity=0.428 Sum_probs=22.3
Q ss_pred HHHHHHHhcCCCcccccEEEEe-------cCccccc
Q psy13580 42 ALTIVLEDADMNKKDVDEIVLV-------GGSTRIP 70 (109)
Q Consensus 42 ~v~~~l~~a~~~~~~I~~Vilv-------GGssriP 70 (109)
.+.+.|++.|+++++|+.|+++ ||...+|
T Consensus 74 ~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~~ 109 (274)
T 3aj3_A 74 TIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYFP 109 (274)
T ss_dssp SHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGCT
T ss_pred cHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhCC
Confidence 4556777889999999999974 6666554
No 332
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=23.46 E-value=71 Score=22.73 Aligned_cols=47 Identities=17% Similarity=0.071 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCcccc-chhhHHHHHHh
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI-PKVQQLVKEFF 80 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri-P~V~~~l~~~f 80 (109)
.+.+++....+-..+...-. .-+.+.|++-||-++. |.+.+.+++.+
T Consensus 238 ~~~~~~~~~~La~~i~~l~~-~ldP~~IvlgG~i~~~~~~l~~~l~~~l 285 (321)
T 3r8e_A 238 LAVWADIGTIIGESLVNIVR-VMDLNNILLGGGISGAFDYFVPNLKKAM 285 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHCCCEEEEESGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHCCCEEEEeChhcccchHHHHHHHHHH
Confidence 34555555555555543211 1233778888887775 55555555444
No 333
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=23.39 E-value=21 Score=23.93 Aligned_cols=28 Identities=32% Similarity=0.442 Sum_probs=20.1
Q ss_pred cccccEEEEecCcc------ccchhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGST------RIPKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGss------riP~V~~~l~~~f~ 81 (109)
+++.|.|++.||.. .-|.+.++|++.+.
T Consensus 64 ~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~ 97 (205)
T 2ab0_A 64 DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHR 97 (205)
T ss_dssp TSCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred cccCCEEEECCCcccHHHhccCHHHHHHHHHHHH
Confidence 45679999999942 24667778877774
No 334
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=23.21 E-value=92 Score=21.87 Aligned_cols=48 Identities=17% Similarity=0.029 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHhc
Q psy13580 33 HASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 33 ~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
.+++++....+-..+...- ..-+.+.|++-||-+..|.+.+.+++.+.
T Consensus 215 ~~~~~~~~~~La~~i~~l~-~~~~p~~IvlgGgi~~~~~~~~~l~~~l~ 262 (297)
T 4htl_A 215 ERLITEFYTGICTGLYNLI-YLFDPTHIFIGGGITSRPTFIAELKHHME 262 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhCCCEEEEeCcccccHHHHHHHHHHHH
Confidence 3455555555544443321 11234679999998887877777777763
No 335
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=23.15 E-value=52 Score=27.39 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=21.4
Q ss_pred cccccEEEEecCcc----ccchhhHHHHHHhcc
Q psy13580 54 KKDVDEIVLVGGST----RIPKVQQLVKEFFNS 82 (109)
Q Consensus 54 ~~~I~~VilvGGss----riP~V~~~l~~~f~~ 82 (109)
..+.|.|++.||+. .-+.+.++|++++..
T Consensus 659 s~~fDALVVPGGg~~~Lr~d~~vl~~Vre~~~~ 691 (753)
T 3ttv_A 659 SLTVDAVIVPCGNIADIADNGDANYYLMEAYKH 691 (753)
T ss_dssp GGGCSEEEECCSCGGGTTTCHHHHHHHHHHHHT
T ss_pred CcCCCEEEECCCChHHhhhCHHHHHHHHHHHhc
Confidence 34578999999942 346788889888843
No 336
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=22.97 E-value=45 Score=23.94 Aligned_cols=21 Identities=33% Similarity=0.452 Sum_probs=17.7
Q ss_pred HHHHHHhcCCCcccccEEEEe
Q psy13580 43 LTIVLEDADMNKKDVDEIVLV 63 (109)
Q Consensus 43 v~~~l~~a~~~~~~I~~Vilv 63 (109)
+.+.|++.|+++++|+.|+++
T Consensus 126 l~~~L~~~Gi~~~~Id~VilT 146 (331)
T 1p9e_A 126 LAANLKAAGYQPEQVDEIYIT 146 (331)
T ss_dssp HHHHHHHTTCCGGGCCEEECS
T ss_pred HHHHHHHcCCCHHHCCEEEeC
Confidence 556677899999999999975
No 337
>2ed2_A General transcription factor II-I; unknown function, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.97 E-value=44 Score=20.67 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=15.4
Q ss_pred CccccchhhHHHHHHhc
Q psy13580 65 GSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 65 GssriP~V~~~l~~~f~ 81 (109)
|++.|-.+++.++++|+
T Consensus 1 ~~~~i~~LrkqVe~LFn 17 (99)
T 2ed2_A 1 GSSGSSGLRKMVDQLFC 17 (99)
T ss_dssp CCSCCCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhh
Confidence 78899999999999994
No 338
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=22.86 E-value=1.9e+02 Score=21.19 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhcCCC-cccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMN-KKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~-~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++ .++| .+++-.+..+ +.+.+.+.+
T Consensus 275 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~---i~~~~~~~l 317 (389)
T 1i88_A 275 VSKNITKALVEAFEPLGISDYNSI-FWIAHPGGPA---ILDQVEQKL 317 (389)
T ss_dssp HHHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHH---HHHHHHHHc
Confidence 3455667888999999998 7777 6777777655 335566666
No 339
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=22.73 E-value=48 Score=22.61 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=21.8
Q ss_pred HHHHHHHhcCCCcccccEEEEe-------cCccccc
Q psy13580 42 ALTIVLEDADMNKKDVDEIVLV-------GGSTRIP 70 (109)
Q Consensus 42 ~v~~~l~~a~~~~~~I~~Vilv-------GGssriP 70 (109)
.+.+.|++.|+++++|+.|+++ ||...+|
T Consensus 89 ~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~~ 124 (276)
T 2r2d_A 89 NLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFG 124 (276)
T ss_dssp SHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGCS
T ss_pred CHHHHHHHcCCCHHHCCEEEecCcccccCCChhhCC
Confidence 3556778889999999999974 6655543
No 340
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=22.60 E-value=95 Score=23.59 Aligned_cols=40 Identities=5% Similarity=-0.022 Sum_probs=30.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccccEEEEecCccc
Q psy13580 29 EEINHASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 29 e~l~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssr 68 (109)
.+.-....+++.+.+++++++++++.+|+|.+++----.+
T Consensus 219 ~~v~~~~~~~~~~~~~~~l~~~~~~~~d~d~~v~Hqp~~r 258 (460)
T 2wya_A 219 DRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCK 258 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEEEECCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhhhcccchH
Confidence 3334455666777788888999999999999998765544
No 341
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=22.36 E-value=1.6e+02 Score=22.57 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=23.2
Q ss_pred cccEEEEecCcc-ccchhhHHHHHHhc
Q psy13580 56 DVDEIVLVGGST-RIPKVQQLVKEFFN 81 (109)
Q Consensus 56 ~I~~VilvGGss-riP~V~~~l~~~f~ 81 (109)
.+|.|+++||-. +-+.||+.+.+.+.
T Consensus 322 gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 322 GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 589999999999 99999999988753
No 342
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=22.09 E-value=30 Score=23.20 Aligned_cols=28 Identities=25% Similarity=0.507 Sum_probs=20.6
Q ss_pred cccccEEEEecCcccc---chhhHHHHHHhc
Q psy13580 54 KKDVDEIVLVGGSTRI---PKVQQLVKEFFN 81 (109)
Q Consensus 54 ~~~I~~VilvGGssri---P~V~~~l~~~f~ 81 (109)
..+.|.|++.||.... |.+.++|++...
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~ 99 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAA 99 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHh
Confidence 4678999999996432 677788887763
No 343
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.91 E-value=42 Score=22.10 Aligned_cols=41 Identities=12% Similarity=0.269 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
..+.+.+.+++++++. +.|-|+.+||.+--+ ...+.+.+.|
T Consensus 53 d~~~i~~~l~~a~~~~-----~~DlVittGG~g~~~~D~t~ea~~~~~ 95 (172)
T 1mkz_A 53 NRYAIRAQVSAWIASD-----DVQVVLITGGTGLTEGDQAPEALLPLF 95 (172)
T ss_dssp CHHHHHHHHHHHHHSS-----SCCEEEEESCCSSSTTCCHHHHHGGGC
T ss_pred CHHHHHHHHHHHHhcC-----CCCEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 3445555666655431 257899999987654 4556666665
No 344
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=21.85 E-value=72 Score=22.11 Aligned_cols=23 Identities=30% Similarity=0.741 Sum_probs=19.9
Q ss_pred ccEEEEecCccccchhhHHHHHHhc
Q psy13580 57 VDEIVLVGGSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 57 I~~VilvGGssriP~V~~~l~~~f~ 81 (109)
+|.|+| |.|.+|.+.+.+++.++
T Consensus 171 ~d~IIL--GCT~~p~l~~~i~~~~~ 193 (254)
T 1b73_A 171 IDTLIL--GCTHYPLLKKEIKKFLG 193 (254)
T ss_dssp CSEEEE--CCCCTTCCHHHHHHHSC
T ss_pred CCEEEE--CccChHHHHHHHHHHcC
Confidence 777777 79999999999999884
No 345
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=21.67 E-value=1.4e+02 Score=22.26 Aligned_cols=27 Identities=15% Similarity=-0.023 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCC-Cccccc
Q psy13580 32 NHASGLNGAGALTIVLEDADM-NKKDVD 58 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~-~~~~I~ 58 (109)
+.+..+-.++...++|+++|+ ++++++
T Consensus 85 ~d~~~~l~l~aa~~AL~dAG~~~~~~i~ 112 (431)
T 2ix4_A 85 VANFIGYAVCAADEALRDAEWLPTEEEE 112 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCccccC
Confidence 455666678899999999999 888887
No 346
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=21.64 E-value=92 Score=21.65 Aligned_cols=19 Identities=37% Similarity=0.595 Sum_probs=15.6
Q ss_pred HhcCCCcccccEEEEecCccc
Q psy13580 48 EDADMNKKDVDEIVLVGGSTR 68 (109)
Q Consensus 48 ~~a~~~~~~I~~VilvGGssr 68 (109)
.|+|+-+. ..|+-+||+++
T Consensus 151 aDAGlIp~--eeVIAiGGT~~ 169 (201)
T 1vp8_A 151 ADSGAIPI--EEVVAVGGRSR 169 (201)
T ss_dssp HHTTSSCS--SCEEEEECSSS
T ss_pred cccCCCCc--ceEEEEccccC
Confidence 47887775 79999999976
No 347
>2d99_A Muscle, general transcription factor II-I repeat domain- containing protein 1; structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.47 E-value=49 Score=20.10 Aligned_cols=17 Identities=29% Similarity=0.626 Sum_probs=13.9
Q ss_pred CccccchhhHHHHHHhc
Q psy13580 65 GSTRIPKVQQLVKEFFN 81 (109)
Q Consensus 65 GssriP~V~~~l~~~f~ 81 (109)
|+|-+-.+++.++++|+
T Consensus 1 ~~~~~~~LrKqVeelF~ 17 (90)
T 2d99_A 1 GSSGSSGLRKMVEEVFD 17 (90)
T ss_dssp CCCCCSCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHH
Confidence 56677779999999993
No 348
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=21.25 E-value=1.9e+02 Score=19.86 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=16.2
Q ss_pred ccEEEEecCccccchhhHHHH
Q psy13580 57 VDEIVLVGGSTRIPKVQQLVK 77 (109)
Q Consensus 57 I~~VilvGGssriP~V~~~l~ 77 (109)
-..|-+.||+|-.+..+.+..
T Consensus 34 ~~~i~lsgGsTp~~~~~~L~~ 54 (266)
T 1fs5_A 34 PFVLGLPTGGTPMTTYKALVE 54 (266)
T ss_dssp CEEEEECCSSTTHHHHHHHHH
T ss_pred ceEEEEcCCCCHHHHHHHHHH
Confidence 356788999998888877665
No 349
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=21.06 E-value=93 Score=22.22 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCccccchhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+++..+.+-..+...-. .-+.+.|++-||-+..+.+.+.+++.+
T Consensus 248 ~~~~~~~~~La~~i~~l~~-~l~p~~IvlgGgi~~~~~l~~~l~~~l 293 (327)
T 4db3_A 248 EHVERFMELLAICFGNIFT-ANDPHVVALGGGLSNFELIYEEMPKRV 293 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHCCSEEEEESGGGGCTHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHH-HhCCCEEEEeCcccchHHHHHHHHHHH
Confidence 3455555555554443221 123367888888887776666676665
No 350
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=20.96 E-value=1.7e+02 Score=21.82 Aligned_cols=41 Identities=15% Similarity=0.021 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhcCCC-cccccEEEEecCccccchhhHHHHHHh
Q psy13580 36 GLNGAGALTIVLEDADMN-KKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 36 ~~~~~~~v~~~l~~a~~~-~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
.+.+.+.++++|+++|++ .++| .+++-.+..++ .+.+.+.+
T Consensus 294 ~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i---~~~~~~~L 335 (413)
T 2p0u_A 294 TKNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPAI---LDQVEAKL 335 (413)
T ss_dssp HHHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCCccce-EEEECCCCHHH---HHHHHHHh
Confidence 455667888999999998 7777 67777776553 45566666
No 351
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.96 E-value=78 Score=20.59 Aligned_cols=26 Identities=27% Similarity=0.575 Sum_probs=18.4
Q ss_pred ccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 55 KDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 55 ~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
++.|-|+.+||.+--+ ...+.+.+++
T Consensus 80 ~~~DlVittGG~g~~~~D~t~ea~~~~~ 107 (178)
T 3iwt_A 80 DEVDVIISTGGTGYSPTDITVETIRKLF 107 (178)
T ss_dssp TTCCEEEEESCCSSSTTCCHHHHHGGGC
T ss_pred CCCCEEEecCCcccCCCCchHHHHHHhh
Confidence 4468899999988665 3556666555
No 352
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=20.93 E-value=1.6e+02 Score=19.58 Aligned_cols=23 Identities=26% Similarity=0.432 Sum_probs=19.9
Q ss_pred cccEEEEecCccccc--hhhHHHHHHh
Q psy13580 56 DVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 56 ~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
++|.|+| |.|.+| .+.+.+++.+
T Consensus 174 ~~d~IvL--gCT~~~t~~~~~~i~~~~ 198 (228)
T 2eq5_A 174 GVEVIAL--GCTGMSTIGIAPVLEEEV 198 (228)
T ss_dssp TCSEEEE--CCTHHHHHTCHHHHHHHH
T ss_pred CCCEEEE--CCCCcchHHHHHHHHHHc
Confidence 4678888 889999 9999999887
No 353
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=20.90 E-value=1.3e+02 Score=22.53 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=25.9
Q ss_pred cCHHHHHHHhHHHHHHHHHHHHHHHHhcCCCc-cccc
Q psy13580 23 TSPEPREEINHASGLNGAGALTIVLEDADMNK-KDVD 58 (109)
Q Consensus 23 itr~~fe~l~~~~~~~~~~~v~~~l~~a~~~~-~~I~ 58 (109)
+++.+.. ...+..+-.++...++|+++|+++ ++++
T Consensus 86 ~~~~~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~~i~ 121 (438)
T 2iwz_A 86 VSKSDIK-SMSSPTIMAIGAAELAMKDSGWHPQSEAD 121 (438)
T ss_dssp SCHHHHT-TSCHHHHHHHHHHHHHHHHHTCCCCSHHH
T ss_pred CCHHHHH-hcCHHHHHHHHHHHHHHHHcCCCCccccc
Confidence 5554443 345566678889999999999998 7777
No 354
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=20.71 E-value=87 Score=22.23 Aligned_cols=46 Identities=20% Similarity=0.057 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccEEEEecCcccc-chhhHHHHHHh
Q psy13580 34 ASGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRI-PKVQQLVKEFF 80 (109)
Q Consensus 34 ~~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssri-P~V~~~l~~~f 80 (109)
+++++....+-..+...-.. -+.+.|++-||-++. |.+.+.+++.+
T Consensus 231 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~~l~~~l~~~l 277 (321)
T 3vgl_A 231 DSFRELARWAGAGLADLASL-FDPSAFIVGGGVSDEGELVLDPIRKSF 277 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeChhhcchHHHHHHHHHHH
Confidence 45555555555555432111 123678888887764 44344444433
No 355
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=20.65 E-value=1.5e+02 Score=21.92 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhcCCC-cccccEEEEecCccccchhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMN-KKDVDEIVLVGGSTRIPKVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~-~~~I~~VilvGGssriP~V~~~l~~~f 80 (109)
..+.+.+.++++|+++|++ .++| .+++-.+.. .+.+.+.+.+
T Consensus 280 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~---~i~~~~~~~l 322 (402)
T 1ee0_A 280 VAKNIENAAEKALSPLGITDWNSV-FWMVHPGGR---AILDQVERKL 322 (402)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSH---HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCccccc-eEEECCCCH---HHHHHHHHHc
Confidence 3455667889999999998 8888 677777644 3445566666
No 356
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=20.42 E-value=47 Score=22.57 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccEEEEecCccccc--hhhHHHHHHh
Q psy13580 35 SGLNGAGALTIVLEDADMNKKDVDEIVLVGGSTRIP--KVQQLVKEFF 80 (109)
Q Consensus 35 ~~~~~~~~v~~~l~~a~~~~~~I~~VilvGGssriP--~V~~~l~~~f 80 (109)
-.+.+.+.+++++++. +.|-|+.+||++--| ...+.+.+.+
T Consensus 50 d~~~I~~al~~a~~~~-----~~DlVitTGGtg~g~~D~T~ea~~~~~ 92 (195)
T 1di6_A 50 EQAIIEQTLCELVDEM-----SCHLVLTTGGTGPARRDVTPDATLAVA 92 (195)
T ss_dssp CHHHHHHHHHHHHHTS-----CCSEEEEESCCSSSTTCCHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcC-----CCCEEEECCCCCCCCCccHHHHHHHHh
Confidence 3344555555554321 358899999997654 3556666654
No 357
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=20.38 E-value=39 Score=22.69 Aligned_cols=14 Identities=21% Similarity=0.294 Sum_probs=9.5
Q ss_pred ccEEEEecC-ccccc
Q psy13580 57 VDEIVLVGG-STRIP 70 (109)
Q Consensus 57 I~~VilvGG-ssriP 70 (109)
+..|++.|| |+|+|
T Consensus 3 ~~aiIlA~G~~~R~~ 17 (245)
T 1h7e_A 3 AVIVIPARYGSSRLP 17 (245)
T ss_dssp EEEEEECCSCCSSST
T ss_pred eEEEEEcCCcCCCCC
Confidence 456788777 66664
No 358
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=20.35 E-value=1.3e+02 Score=21.33 Aligned_cols=23 Identities=22% Similarity=0.172 Sum_probs=17.3
Q ss_pred cccEEEEecCccccchhhHHHHH
Q psy13580 56 DVDEIVLVGGSTRIPKVQQLVKE 78 (109)
Q Consensus 56 ~I~~VilvGGssriP~V~~~l~~ 78 (109)
....|-|.||+|-.+..+.+.+.
T Consensus 33 ~~~~lglsgGsTp~~~~~~L~~~ 55 (289)
T 1ne7_A 33 KYFTLGLPTGSTPLGCYKKLIEY 55 (289)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHHHHhh
Confidence 33568889999998888777653
No 359
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=20.16 E-value=1.2e+02 Score=23.14 Aligned_cols=33 Identities=3% Similarity=0.015 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcccccEEEEec
Q psy13580 32 NHASGLNGAGALTIVLEDADMNKKDVDEIVLVG 64 (109)
Q Consensus 32 ~~~~~~~~~~~v~~~l~~a~~~~~~I~~VilvG 64 (109)
-.++++.+.+.++++++++++++.+|..|=+.+
T Consensus 50 p~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 82 (506)
T 3h3n_X 50 ANEIWNSVQSVIAGAFIESGIRPEAIAGIGITN 82 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhheEEEEeeC
Confidence 345778888899999999998888887776554
Done!