BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13591
(339 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312125843|gb|ADQ27865.1| fushi tarazu [Thermobia domestica]
Length = 369
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 85/133 (63%), Gaps = 16/133 (12%)
Query: 213 GFNMDRNGNPVGLRADSNGVGSPD-----VQDSCSVSS-----QQDHEGEDGATLYPWMK 262
G ++ NG V N +G PD VQ V+ QQ G+ A +PWMK
Sbjct: 167 GRDLIANGCKVSSFCAPNNIGVPDSSSLMVQQGFDVTRPLDCLQQPFVGKGPANYFPWMK 226
Query: 263 SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
S D TG G KR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH L L+ERQIK
Sbjct: 227 SYTD------TGHGPKRTRQTYTRFQTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIK 280
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KKE
Sbjct: 281 IWFQNRRMKAKKE 293
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 105/202 (51%), Gaps = 33/202 (16%)
Query: 142 FDKDPAKYYDNFLN-----HNAMNYNQMNAFNQFHMKLNPNHTDYLRTNSDKETLNATNF 196
F + P+K+ N H +N N + F L+ + + YL SD +T+
Sbjct: 369 FAQSPSKFGSNLSLRDPNYHALLNTNPACSVAAFRPLLHSDGSTYLSVPSDAVPQISTSL 428
Query: 197 VPKDEAI-SEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG--ED 253
+AI S +D P RNG NG G C+ + + G E
Sbjct: 429 GASLDAIQSGQLDHLSP-----RNG--------MNGGG-------CTTPTGRTASGTTES 468
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G +YPWM G KR+RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH
Sbjct: 469 GVVVYPWMNPK-----GTDVGADQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHT 523
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 524 LTLTERQIKIWFQNRRMKWKKD 545
>gi|225717090|gb|ACO14391.1| Homeobox protein Hox-B7a [Esox lucius]
Length = 215
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
G P SC + Q+ HE D +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 101 GEPSKLTSCGKAEQRQHE--DSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 149
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 150 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 192
>gi|86515424|ref|NP_001034539.1| fushi tarazu [Tribolium castaneum]
gi|13241680|gb|AAK16421.1|AF321227_1 Ftz [Tribolium castaneum]
Length = 290
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 77/97 (79%), Gaps = 5/97 (5%)
Query: 239 DSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
D+ + S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+
Sbjct: 150 DNNNFSAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHF 204
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
NKYL+R+RRIEIA L+LTERQIKIWFQNRRMK KK+
Sbjct: 205 NKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKD 241
>gi|15450325|gb|AAK96032.1| homeodomain transcription factor Fushi tarazu [Tribolium castaneum]
gi|270002804|gb|EEZ99251.1| fushi tarazu [Tribolium castaneum]
Length = 290
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 77/97 (79%), Gaps = 5/97 (5%)
Query: 239 DSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
D+ + S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+
Sbjct: 150 DNNNFSAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHF 204
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
NKYL+R+RRIEIA L+LTERQIKIWFQNRRMK KK+
Sbjct: 205 NKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKD 241
>gi|541626|gb|AAC46491.1| fushi-tarazu [Tribolium castaneum]
gi|1093401|prf||2103337A fushi tarazu gene
Length = 322
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%), Gaps = 5/92 (5%)
Query: 244 SSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+NKYL+
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHFNKYLT 209
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RRIEIA L+LTERQIKIWFQNRRMK KK+
Sbjct: 210 RRRRIEIAESLRLTERQIKIWFQNRRMKAKKD 241
>gi|332692497|gb|AEE90176.1| Homeobox B7b [Anguilla anguilla]
Length = 221
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
Query: 232 VGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQT 289
G P Q SC + Q+D +D +YPWM+S TG KR RQTY+RYQT
Sbjct: 101 TGDPTKQSSCGKAEQRDCVQQDEGNFRIYPWMRS---------TGVDRKRGRQTYTRYQT 151
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 152 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 197
>gi|224086908|ref|XP_002187141.1| PREDICTED: homeobox protein Hox-B7 isoform 1 [Taeniopygia guttata]
gi|449491428|ref|XP_004174234.1| PREDICTED: homeobox protein Hox-B7 isoform 2 [Taeniopygia guttata]
Length = 217
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 76/104 (73%), Gaps = 12/104 (11%)
Query: 235 PDV-QDSCSVSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + +CS S Q+D +G+ +YPWM+S TG KR RQTY+RYQTLE
Sbjct: 101 PDASKQNCSKSDQRDADLQGDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLE 151
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 LEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 6/102 (5%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
SP + + + E + YPWMKS D SC+ G KR+RQTY+R QTLELE
Sbjct: 180 SPPAKSPSNTAQSPSLETQKTTNFYPWMKSYTD---SCQ---GQKRTRQTYTRIQTLELE 233
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 234 KEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKKE 275
>gi|213512800|ref|NP_001134382.1| Homeobox protein Hox-B7a [Salmo salar]
gi|157816085|gb|ABV82061.1| homeobox protein HoxB7aa [Salmo salar]
gi|158702266|gb|ABW77465.1| homeobox protein HoxB7aa [Salmo salar]
gi|209732842|gb|ACI67290.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223646772|gb|ACN10144.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223672627|gb|ACN12495.1| Homeobox protein Hox-B7a [Salmo salar]
Length = 223
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
G P SC + Q+ + ED +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 108 GDPSKVSSCGKAEQR--QNEDSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 199
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 80/121 (66%), Gaps = 14/121 (11%)
Query: 216 MDRNGNPVGLRA-DSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTG 274
++ P RA +S+ + SP V + + LYPWMKS+ D T
Sbjct: 3 LNSRATPESTRAVESSVLSSPPV-------TAHTQNPQISKPLYPWMKSHGD------TT 49
Query: 275 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 334
G KRSRQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 50 PGPKRSRQTYTRYQTLELEKEFHFNQYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKAKK 109
Query: 335 E 335
E
Sbjct: 110 E 110
>gi|312125839|gb|ADQ27863.1| fushi tarazu [Callosobruchus maculatus]
Length = 368
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 65/78 (83%), Gaps = 5/78 (6%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM+S+ D T GNKR+RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 207 FYPWMRSSND-----HTAKGNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLCL 261
Query: 317 TERQIKIWFQNRRMKLKK 334
TERQIKIWFQNRRMK KK
Sbjct: 262 TERQIKIWFQNRRMKAKK 279
>gi|220898195|gb|ACL81450.1| HoxB7 [Latimeria menadoensis]
Length = 216
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Query: 241 CSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
CS + Q+D E E +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 108 CSKTEQRDSEQQNESNFRIYPWMRS---------TGPDRKRGRQTYTRYQTLELEKEFHY 158
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|385654490|gb|AFI61989.1| Hox-B7b [Anguilla japonica]
Length = 221
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
Query: 232 VGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQT 289
G P Q SC + ++D +D +YPWM+S TG KR RQTY+RYQT
Sbjct: 101 TGDPTKQSSCGKAERRDCAQQDEGNFRIYPWMRS---------TGVDRKRGRQTYTRYQT 151
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 152 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 197
>gi|312125841|gb|ADQ27864.1| fushi tarazu [Dermestes maculatus]
Length = 377
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 9/106 (8%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGAT----LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQT 289
+P V ++S ++ + T +YPWMK+N +A T G KR+RQTY+RYQT
Sbjct: 206 TPAVIPQDEINSSENISNTNSVTPTNNIYPWMKANAEA-----TNHGGKRTRQTYTRYQT 260
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 261 LELEKEFHFNKYLTRRRRIEIAHALCLSERQIKIWFQNRRMKAKKD 306
>gi|70569917|dbj|BAE06502.1| transcription factor protein [Ciona intestinalis]
Length = 220
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 87/132 (65%), Gaps = 8/132 (6%)
Query: 207 VDGKPPGFNMDR--NGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGED-GATLYPWMKS 263
++ + PG M +GN V +R V SP ++D S + +G D A +YPWMK
Sbjct: 74 INSQHPGHVMQHPFHGNDV-IRDHHGFVTSPSIRDVTERKSDESSDGSDRDAIIYPWMKR 132
Query: 264 NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
+ +T +KR+R Y+RYQTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKI
Sbjct: 133 ----IHGGETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKI 188
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KKE
Sbjct: 189 WFQNRRMKWKKE 200
>gi|213512172|ref|NP_001135146.1| homeobox protein HoxB7ab [Salmo salar]
gi|157816105|gb|ABV82071.1| homeobox protein HoxB7ab [Salmo salar]
gi|158702278|gb|ABW77476.1| homeobox protien HoxB7ab [Salmo salar]
Length = 223
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
G P +C + Q+ +E D +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 108 GDPSKVSNCGKAEQRQNE--DSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 199
>gi|74096097|ref|NP_001027665.1| Hox 5 [Ciona intestinalis]
gi|2564231|emb|CAA05151.1| Hox 5 [Ciona intestinalis]
Length = 220
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 87/132 (65%), Gaps = 8/132 (6%)
Query: 207 VDGKPPGFNMDR--NGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGED-GATLYPWMKS 263
++ + PG M +GN V +R V SP ++D S + +G D A +YPWMK
Sbjct: 74 INSQHPGHVMQHPFHGNDV-IRDHHGFVTSPSIRDVTERKSDESSDGSDRDAIIYPWMKR 132
Query: 264 NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
+ +T +KR+R Y+RYQTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKI
Sbjct: 133 ----IHGGETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKI 188
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KKE
Sbjct: 189 WFQNRRMKWKKE 200
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+PWMKS D+ G G KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 182 FFPWMKSYTDS------GQGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGL 235
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 236 TERQIKIWFQNRRMKAKKE 254
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWMKS D S G KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 FYPWMKSYTDNS------SGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGL 247
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 248 SERQIKIWFQNRRMKAKKE 266
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
D G+ +YPWM+SN C G +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 129 DDGGKTSTVIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 182
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
IEIAH L LTERQIKIWFQNRRMK KKE+ V
Sbjct: 183 IEIAHALGLTERQIKIWFQNRRMKWKKEQKV 213
>gi|238822187|gb|ACR58763.1| sex combs reduced [Onthophagus sagittarius]
Length = 298
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + GG KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 207 IYPWMKRVHLGQSTVNANGGTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 266
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 267 TERQIKIWFQNRRMKWKKE 285
>gi|291405867|ref|XP_002719358.1| PREDICTED: homeobox B7 [Oryctolagus cuniculus]
Length = 217
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGADRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|332692487|gb|AEE90167.1| Homeobox B7a [Anguilla anguilla]
Length = 220
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 232 VGSPDVQDSCSVSSQQD-HEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
G P +C + Q D H+ + +YPWM+S TG KR RQTY+RYQTL
Sbjct: 101 AGDPAKHPNCWRADQGDYHQESESFRIYPWMRS---------TGSERKRGRQTYTRYQTL 151
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 ELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKE 196
>gi|169259788|ref|NP_001108563.1| homeobox protein Hox-B7a [Danio rerio]
gi|60392411|sp|Q8AWY9.1|HXB7A_DANRE RecName: Full=Homeobox protein Hox-B7a; Short=Hox-B7
gi|26984635|emb|CAD59112.1| SI:dZ254O17.2 (homeo box protein B7a) [Danio rerio]
gi|190338728|gb|AAI63357.1| Homeo box B7a [Danio rerio]
gi|190339800|gb|AAI63361.1| Homeo box B7a [Danio rerio]
Length = 227
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 9/84 (10%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
E+ +YPWM+S TG KR RQTYSRYQTLELEKEFH+N+YLSR+RRIEIA
Sbjct: 129 ENNLRIYPWMRS---------TGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIA 179
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KKE
Sbjct: 180 HALCLTERQIKIWFQNRRMKWKKE 203
>gi|402899491|ref|XP_003912729.1| PREDICTED: homeobox protein Hox-B7 [Papio anubis]
Length = 217
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 83/131 (63%), Gaps = 21/131 (16%)
Query: 210 KPPGFNM-----DRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSN 264
+P FNM ++N + V + VG+ + +DS D E +YPWM+S
Sbjct: 81 EPSSFNMHCAPFEQNLSGVCPGDSAKAVGAKEQRDS-------DLAAESNFRIYPWMRS- 132
Query: 265 QDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 324
+G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIW
Sbjct: 133 --------SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIW 184
Query: 325 FQNRRMKLKKE 335
FQNRRMK KKE
Sbjct: 185 FQNRRMKWKKE 195
>gi|385654478|gb|AFI61979.1| Hox-B7a [Anguilla japonica]
Length = 220
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 232 VGSPDVQDSCSVSSQQD-HEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
G P +C + Q D H+ + +YPWM+S TG KR RQTY+RYQTL
Sbjct: 101 AGDPAKHPNCWRADQGDYHQESESFRIYPWMRS---------TGSERKRGRQTYTRYQTL 151
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 ELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKE 196
>gi|156551123|ref|XP_001603670.1| PREDICTED: hypothetical protein LOC100110062 [Nasonia vitripennis]
Length = 448
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
++E E T +PWMKSN + G KR+RQTY+RYQTLELEKEFH+ +YLSRKRR
Sbjct: 243 EYEDEPMPTDFPWMKSNYGSCALDVKRSGQKRTRQTYTRYQTLELEKEFHFCRYLSRKRR 302
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
+EIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 303 VEIAHSLGLTERQIKIWFQNRRMKAKKD 330
>gi|449277036|gb|EMC85343.1| Homeobox protein Hox-B7 [Columba livia]
Length = 217
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 11/97 (11%)
Query: 241 CSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
CS + Q+D + + + +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 108 CSKTDQRDSDLQSDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHY 158
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|334323085|ref|XP_003340341.1| PREDICTED: homeobox protein Hox-B7-like [Monodelphis domestica]
Length = 217
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query: 239 DSCSVSSQQDHEGEDGAT-----LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
DS S +D D A +YPWM+S TG KR RQTY+RYQTLELE
Sbjct: 103 DSAKAGSGKDQRESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELE 153
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 154 KEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|165873665|gb|ABY67957.1| lox5 hox protein [Capitella teleta]
gi|443689508|gb|ELT91882.1| hypothetical protein CAPTEDRAFT_168125 [Capitella teleta]
Length = 284
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ A + G KR+RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH LQL
Sbjct: 164 IYPWMRPLSGADF----GYEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALQL 219
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 220 TERQIKIWFQNRRMKYKKE 238
>gi|410980865|ref|XP_003996794.1| PREDICTED: homeobox protein Hox-B7 [Felis catus]
Length = 217
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|426237815|ref|XP_004012853.1| PREDICTED: homeobox protein Hox-B7 [Ovis aries]
Length = 217
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|296476456|tpg|DAA18571.1| TPA: homeobox protein Hox-B7 [Bos taurus]
gi|440910522|gb|ELR60316.1| Homeobox protein Hox-B7 [Bos grunniens mutus]
Length = 217
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|109944936|dbj|BAE96996.1| Antennapedia [Artemia franciscana]
gi|109944941|dbj|BAE96999.1| Antennapedia [Artemia franciscana]
Length = 357
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 222 PVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSR 281
P+ +G G+ D D S +++ G + LYPWMKS + KR R
Sbjct: 224 PISQSQIGSGSGNEDSHDVSSDENEEQGGGSGDSNLYPWMKSQFE----------RKRGR 273
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 274 QTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 327
>gi|431890744|gb|ELK01623.1| Homeobox protein Hox-B7 [Pteropus alecto]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 74/108 (68%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV + D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCAGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|18307792|gb|AAL67685.1|AF435786_1 antennapedia [Artemia franciscana]
gi|109944938|dbj|BAE96997.1| Antennapedia [Artemia franciscana]
gi|109944944|dbj|BAE97001.1| Antennapedia [Artemia franciscana]
Length = 348
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 222 PVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSR 281
P+ +G G+ D D S +++ G + LYPWMKS + KR R
Sbjct: 224 PISQSQIGSGSGNEDSHDVSSDENEEQGGGSGDSNLYPWMKSQFE----------RKRGR 273
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 274 QTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 327
>gi|148232956|ref|NP_001084118.1| homeobox protein Hox-B7-B [Xenopus laevis]
gi|67678245|gb|AAH97639.1| Hoxb7 protein [Xenopus laevis]
Length = 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Query: 241 CSVSSQQDHEGEDGATL--YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
C+ + Q+D E + A L YPWM+S G KR RQTY+RYQTLELEKEFH+
Sbjct: 109 CTKAEQRDSELHNEANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEKEFHF 159
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 160 NRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>gi|123274|sp|P04476.1|HXB7B_XENLA RecName: Full=Homeobox protein Hox-B7-B; AltName: Full=P52;
AltName: Full=XlHbox-2 B
gi|64748|emb|CAA29814.1| unnamed protein product [Xenopus laevis]
Length = 220
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Query: 241 CSVSSQQDHEGEDGATL--YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
C+ + Q+D E + A L YPWM+S G KR RQTY+RYQTLELEKEFH+
Sbjct: 109 CTKAEQRDSELHNEANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEKEFHF 159
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 160 NRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>gi|73966250|ref|XP_851221.1| PREDICTED: homeobox protein Hox-B7 [Canis lupus familiaris]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|395826620|ref|XP_003786515.1| PREDICTED: homeobox protein Hox-B7 [Otolemur garnettii]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|301762934|ref|XP_002916869.1| PREDICTED: homeobox protein Hox-B7-like [Ailuropoda melanoleuca]
gi|281344383|gb|EFB19967.1| hypothetical protein PANDA_005014 [Ailuropoda melanoleuca]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|311267496|ref|XP_003131597.1| PREDICTED: homeobox protein Hox-B7-like [Sus scrofa]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|426347608|ref|XP_004041441.1| PREDICTED: homeobox protein Hox-B7 [Gorilla gorilla gorilla]
gi|146324926|sp|A1YFA5.1|HXB7_GORGO RecName: Full=Homeobox protein Hox-B7
gi|120975055|gb|ABM46823.1| HOXB7 [Gorilla gorilla]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 6/89 (6%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
D G+ +YPWM+SN G +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 127 DDGGKSSTVIYPWMRSNN------YCGSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKEK 336
IEIAH L LTERQIKIWFQNRRMK KKE+
Sbjct: 181 IEIAHALGLTERQIKIWFQNRRMKWKKEQ 209
>gi|297715941|ref|XP_002834301.1| PREDICTED: homeobox protein Hox-B7 [Pongo abelii]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|296202579|ref|XP_002748518.1| PREDICTED: homeobox protein Hox-B7 [Callithrix jacchus]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAEGNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|403279485|ref|XP_003931280.1| PREDICTED: homeobox protein Hox-B7 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAEGNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|359754100|gb|AEV59522.1| HOXB7 [Macropus eugenii]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Query: 246 QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
+ D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+
Sbjct: 115 ESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRR 165
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 166 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|27805921|ref|NP_776767.1| homeobox protein Hox-B7 [Bos taurus]
gi|18203484|sp|Q9TT89.1|HXB7_BOVIN RecName: Full=Homeobox protein Hox-B7
gi|6573100|gb|AAF17552.1|AF200721_1 homeodomain-containing transcription factor [Bos taurus]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|332847298|ref|XP_511938.3| PREDICTED: homeobox protein Hox-B7 [Pan troglodytes]
gi|397514568|ref|XP_003827553.1| PREDICTED: homeobox protein Hox-B7 [Pan paniscus]
gi|410210976|gb|JAA02707.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210978|gb|JAA02708.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210980|gb|JAA02709.1| homeobox B7 [Pan troglodytes]
gi|410247334|gb|JAA11634.1| homeobox B7 [Pan troglodytes]
gi|410247336|gb|JAA11635.1| homeobox B7 [Pan troglodytes]
gi|410334655|gb|JAA36274.1| homeobox B7 [Pan troglodytes]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|109114195|ref|XP_001088822.1| PREDICTED: homeobox protein Hox-B7 [Macaca mulatta]
gi|355568484|gb|EHH24765.1| hypothetical protein EGK_08480 [Macaca mulatta]
gi|355753959|gb|EHH57924.1| hypothetical protein EGM_07669 [Macaca fascicularis]
Length = 217
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|45553285|ref|NP_996169.1| antennapedia, isoform F [Drosophila melanogaster]
gi|45553291|ref|NP_996172.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446387|gb|AAS65107.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446388|gb|AAS65108.1| antennapedia, isoform F [Drosophila melanogaster]
Length = 365
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 228 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 279
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 280 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 335
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 336 RMKWKKE 342
>gi|297591838|gb|ADI46796.1| RE64079p [Drosophila melanogaster]
Length = 378
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 292
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|45553281|ref|NP_996167.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45553283|ref|NP_996168.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45553287|ref|NP_996170.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45553297|ref|NP_996175.1| antennapedia, isoform M [Drosophila melanogaster]
gi|123317|sp|P02833.1|ANTP_DROME RecName: Full=Homeotic protein antennapedia
gi|156947|gb|AAA28376.1| Antennapedia differentiation protein [Drosophila melanogaster]
gi|156949|gb|AAA70214.1| antennapedia protein [Drosophila melanogaster]
gi|156951|gb|AAA70216.1| antennapedia protein [Drosophila melanogaster]
gi|1805742|emb|CAA27417.1| antennapedia protein [Drosophila melanogaster]
gi|4389423|gb|AAD19793.1| homeodomain protein [Drosophila melanogaster]
gi|45446391|gb|AAS65111.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45446392|gb|AAS65112.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45446393|gb|AAS65113.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45446394|gb|AAS65114.1| antennapedia, isoform M [Drosophila melanogaster]
gi|224976|prf||1205216A gene Antp
Length = 378
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 292
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|395532653|ref|XP_003768384.1| PREDICTED: homeobox protein Hox-B7 [Sarcophilus harrisii]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Query: 246 QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
+ D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+
Sbjct: 115 ESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRR 165
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 166 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|344285925|ref|XP_003414710.1| PREDICTED: homeobox protein Hox-B7-like [Loxodonta africana]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|15929847|gb|AAH15345.1| Homeobox B7 [Homo sapiens]
gi|60816679|gb|AAX36392.1| homeobox B7 [synthetic construct]
gi|61358381|gb|AAX41558.1| homeobox B7 [synthetic construct]
gi|61359764|gb|AAX41764.1| homeobox B7 [synthetic construct]
gi|119615131|gb|EAW94725.1| homeobox B7, isoform CRA_a [Homo sapiens]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|45553279|ref|NP_996166.1| antennapedia, isoform K [Drosophila melanogaster]
gi|45553293|ref|NP_996173.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446385|gb|AAS65105.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446386|gb|AAS65106.1| antennapedia, isoform K [Drosophila melanogaster]
Length = 361
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 228 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 279
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 280 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 331
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 332 RMKWKKE 338
>gi|85068580|ref|NP_004493.3| homeobox protein Hox-B7 [Homo sapiens]
gi|311033482|sp|P09629.4|HXB7_HUMAN RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein HHO.C1; AltName: Full=Homeobox protein Hox-2C
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|255742447|gb|ACU32561.1| homeobox protein HoxB7 [Callorhinchus milii]
Length = 211
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 238 QDSCSVSSQQDHEGE-DGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 296
+ SCS S +D + + + +YPWMKS + KR RQTY+RYQTLELEKEF
Sbjct: 106 KQSCSKSELRDTDSQSENFRIYPWMKS---------SASDRKRGRQTYTRYQTLELEKEF 156
Query: 297 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
H+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE M
Sbjct: 157 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKAM 199
>gi|194217070|ref|XP_001918206.1| PREDICTED: homeobox protein Hox-B7-like [Equus caballus]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAETNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|60828272|gb|AAX36836.1| homeobox B7 [synthetic construct]
gi|61368483|gb|AAX43187.1| homeobox B7 [synthetic construct]
gi|61369779|gb|AAX43390.1| homeobox B7 [synthetic construct]
Length = 218
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|194742008|ref|XP_001953501.1| GF17789 [Drosophila ananassae]
gi|190626538|gb|EDV42062.1| GF17789 [Drosophila ananassae]
Length = 378
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 245 GAPPQGMMHQGQGPSQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 296
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 297 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|327275818|ref|XP_003222669.1| PREDICTED: homeobox protein Hox-B7-like [Anolis carolinensis]
Length = 219
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+RR
Sbjct: 119 DQRDESNLRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRR 169
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 170 IEIAHALCLTERQIKIWFQNRRMKWKKE 197
>gi|158254738|dbj|BAF83342.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|45553289|ref|NP_996171.1| antennapedia, isoform N [Drosophila melanogaster]
gi|45553295|ref|NP_996174.1| antennapedia, isoform D [Drosophila melanogaster]
gi|195344085|ref|XP_002038619.1| GM10522 [Drosophila sechellia]
gi|195568836|ref|XP_002102418.1| GD19515 [Drosophila simulans]
gi|45446389|gb|AAS65109.1| antennapedia, isoform D [Drosophila melanogaster]
gi|45446390|gb|AAS65110.1| antennapedia, isoform N [Drosophila melanogaster]
gi|194133640|gb|EDW55156.1| GM10522 [Drosophila sechellia]
gi|194198345|gb|EDX11921.1| GD19515 [Drosophila simulans]
Length = 374
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 292
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 344
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 345 RMKWKKE 351
>gi|195498909|ref|XP_002096727.1| GE25826 [Drosophila yakuba]
gi|194182828|gb|EDW96439.1| GE25826 [Drosophila yakuba]
Length = 375
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 242 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 293
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 294 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 345
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 346 RMKWKKE 352
>gi|194899155|ref|XP_001979126.1| antp [Drosophila erecta]
gi|190650829|gb|EDV48084.1| antp [Drosophila erecta]
Length = 374
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 209 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS 268
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 292
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 344
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 345 RMKWKKE 351
>gi|51390|emb|CAA29934.1| unnamed protein product [Mus musculus]
gi|861031|emb|CAA68494.1| 2.3 gene product [Mus musculus]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDAAKAGGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|354474762|ref|XP_003499599.1| PREDICTED: homeobox protein Hox-B7-like [Cricetulus griseus]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|148684077|gb|EDL16024.1| homeobox B7 [Mus musculus]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|62945316|ref|NP_001017480.1| homeobox protein Hox-B7 [Rattus norvegicus]
gi|83303676|sp|P18864.2|HXB7_RAT RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein R1B
gi|51259417|gb|AAH79340.1| Homeo box B7 [Rattus norvegicus]
gi|149053981|gb|EDM05798.1| homeobox protein [Rattus norvegicus]
Length = 219
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTERKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|301128885|emb|CBL59348.1| HoxB7 [Scyliorhinus canicula]
Length = 211
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 11/109 (10%)
Query: 232 VGSPD-VQDSCSVSSQQDHEGE-DGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQT 289
G+ D + +CS S Q++ + + + +YPWMKS + KR RQTY+RYQT
Sbjct: 99 CGAGDSCKQTCSKSEQREADPQSENFRIYPWMKS---------SASDRKRGRQTYTRYQT 149
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
LELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE V
Sbjct: 150 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKV 198
>gi|88014652|ref|NP_034590.2| homeobox protein Hox-B7 [Mus musculus]
gi|114152821|sp|P09024.2|HXB7_MOUSE RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein Hox-2.3; AltName: Full=Homeobox protein MH-22B;
AltName: Full=Homeobox protein MuB1
gi|147897801|gb|AAI40345.1| Homeo box B7 [synthetic construct]
Length = 217
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|363743430|ref|XP_003642838.1| PREDICTED: homeobox protein Hox-B7 [Gallus gallus]
Length = 217
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 126 IYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 176
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 177 TERQIKIWFQNRRMKWKKE 195
>gi|444517712|gb|ELV11730.1| Homeobox protein Hox-B7 [Tupaia chinensis]
Length = 163
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 43 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 93
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 94 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 141
>gi|213514274|ref|NP_001135096.1| homeobox protein HoxA4aa [Salmo salar]
gi|157816045|gb|ABV82041.1| homeobox protein HoxA4aa [Salmo salar]
gi|158702224|gb|ABW77443.1| homeobox protein HoxA4aa [Salmo salar]
Length = 253
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 8/118 (6%)
Query: 221 NPVGLRADSNGVGSPDVQDSCSVSSQQ---DHEGEDGATLYPWMKSNQDASYSCKTGGGN 277
NPV DS V DV CS++++ +G++ +YPWMK + + GG
Sbjct: 95 NPV---PDSGAVA--DVSKDCSLATESYSSAQKGKEVPVVYPWMKKVHVVNATYNGGGVP 149
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + LTERQ+KIWFQNRRMK KK+
Sbjct: 150 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKD 207
>gi|207452734|ref|NP_001129067.1| homeobox protein Hox-A7 [Pan troglodytes]
gi|146324919|sp|A2T7F3.1|HXA7_PANTR RecName: Full=Homeobox protein Hox-A7
gi|124111397|gb|ABM92108.1| HOXA7 [Pan troglodytes]
Length = 230
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|383849607|ref|XP_003700436.1| PREDICTED: homeobox protein Hox-A5a-like [Megachile rotundata]
Length = 373
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G + +YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 255 GSNPPQIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 314
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 315 AHALCLTERQIKIWFQNRRMKWKKE 339
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGSAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGSAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|397472859|ref|XP_003807951.1| PREDICTED: homeobox protein Hox-A7 [Pan paniscus]
Length = 230
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|410215418|gb|JAA04928.1| homeobox A7 [Pan troglodytes]
gi|410339189|gb|JAA38541.1| homeobox A7 [Pan troglodytes]
Length = 230
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|149705657|ref|XP_001499535.1| PREDICTED: homeobox protein Hox-A7-like [Equus caballus]
Length = 234
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 6/86 (6%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G+ +YPWM+SN C G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 128 GKTPTIIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 181
Query: 311 AHELQLTERQIKIWFQNRRMKLKKEK 336
AH L LTERQIKIWFQNRRMK KKE+
Sbjct: 182 AHTLGLTERQIKIWFQNRRMKWKKEQ 207
>gi|344285927|ref|XP_003414711.1| PREDICTED: homeobox protein Hox-B6-like [Loxodonta africana]
Length = 224
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + A +YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 117 ETEEQKCSAPVYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 175
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 176 RIEIAHALCLTERQIKIWFQNRRMKWKKESKLL 208
>gi|170649680|gb|ACB21265.1| homeobox A7 (predicted) [Callicebus moloch]
Length = 229
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|24497556|ref|NP_008827.2| homeobox protein Hox-A7 [Homo sapiens]
gi|311033439|sp|P31268.3|HXA7_HUMAN RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox 1.1; AltName: Full=Homeobox protein Hox-1A
gi|51094977|gb|EAL24221.1| homeo box A7 [Homo sapiens]
gi|119614283|gb|EAW93877.1| homeobox A7 [Homo sapiens]
gi|147897929|gb|AAI40402.1| Homeobox A7 [synthetic construct]
gi|151555121|gb|AAI48693.1| Homeobox A7 [synthetic construct]
Length = 230
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|327275816|ref|XP_003222668.1| PREDICTED: homeobox protein Hox-B6-like [Anolis carolinensis]
Length = 231
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 209 GKPPGFNMDRNGNPVGLRA--DSNGVGSPDVQDS-CSVSSQQDHEGED---GATLYPWMK 262
G PPGF ++ + L + D G + S CS S + +D +YPWM+
Sbjct: 80 GTPPGFYREKETSACSLSSLDDPAQFGQESGRKSDCSQSKHVFGDSDDQKCSTPVYPWMQ 139
Query: 263 SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
++ S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIK
Sbjct: 140 -RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 198
Query: 323 IWFQNRRMKLKKEKIVM 339
IWFQNRRMK KKE ++
Sbjct: 199 IWFQNRRMKWKKENKLL 215
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|297680780|ref|XP_002818146.1| PREDICTED: homeobox protein Hox-A7 [Pongo abelii]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|201023305|ref|NP_001128396.1| sex combs reduced [Nasonia vitripennis]
Length = 390
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 63/86 (73%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
G + +YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 271 SGGNPPQIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIE 330
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 331 IAHALCLTERQIKIWFQNRRMKWKKE 356
>gi|184185536|gb|ACC68937.1| homeobox protein Hox-A7 (predicted) [Rhinolophus ferrumequinum]
Length = 232
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|195446505|ref|XP_002070809.1| GK10824 [Drosophila willistoni]
gi|194166894|gb|EDW81795.1| GK10824 [Drosophila willistoni]
Length = 374
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 29/124 (23%)
Query: 231 GVGSPDVQD--SCSVSSQQDHEGEDG-----------------ATLYPWMKSNQDASYSC 271
GVG+P Q Q H+G G + LYPWM+S +
Sbjct: 238 GVGAPGPQGMMHAGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFE----- 292
Query: 272 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 331
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 293 -----RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 347
Query: 332 LKKE 335
KKE
Sbjct: 348 WKKE 351
>gi|147900428|ref|NP_001079110.1| homeobox protein Hox-B7-A [Xenopus laevis]
gi|3023938|sp|Q91771.1|HXB7A_XENLA RecName: Full=Homeobox protein Hox-B7-A; AltName: Full=MM3;
AltName: Full=XlHbox-2 A
gi|530987|gb|AAA49754.1| homeobox protein [Xenopus laevis]
gi|50415073|gb|AAH77970.1| Hbox2-A protein [Xenopus laevis]
Length = 220
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 75/106 (70%), Gaps = 12/106 (11%)
Query: 232 VGSPDVQDSCSVSSQQDHEGEDGATL--YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQT 289
G P Q+S + + Q++ E + A L YPWM+S G KR RQTY+RYQT
Sbjct: 103 AGDPTKQNS-AKAEQRESELHNEANLRIYPWMRS---------AGADRKRGRQTYTRYQT 152
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 LELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWKKE 198
>gi|31205335|ref|XP_311616.1| AGAP004659-PA [Anopheles gambiae str. PEST]
gi|3420834|gb|AAC31944.1| Sex combs reduced homeotic protein [Anopheles gambiae]
gi|30177656|gb|EAA07257.2| AGAP004659-PA [Anopheles gambiae str. PEST]
Length = 372
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 260 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 319
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 320 TERQIKIWFQNRRMKWKKE 338
>gi|357623860|gb|EHJ74850.1| sex combs reduced-like protein [Danaus plexippus]
Length = 336
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 224 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 284 TERQIKIWFQNRRMKWKKE 302
>gi|344249137|gb|EGW05241.1| Homeobox protein Hox-B7 [Cricetulus griseus]
Length = 153
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 33 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 83
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 84 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 131
>gi|195498914|ref|XP_002096729.1| GE25827 [Drosophila yakuba]
gi|194182830|gb|EDW96441.1| GE25827 [Drosophila yakuba]
Length = 419
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 306 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 365
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 366 TERQIKIWFQNRRMKWKKE 384
>gi|391337014|ref|XP_003742869.1| PREDICTED: uncharacterized protein LOC100904659 [Metaseiulus
occidentalis]
Length = 330
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 258 YPWMKS----NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
YPWMK D C T KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 204 YPWMKGYAPNTADGQGGCPTSA-PKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 262
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KKE
Sbjct: 263 LCLSERQIKIWFQNRRMKAKKE 284
>gi|160421815|gb|ABX39492.1| AmphiHox8 [Branchiostoma floridae]
Length = 212
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
P Q ++ + + YPWM++ G +R RQTYSRYQTLELEK
Sbjct: 94 PSCQQEEKTATMGMAQSQLAIPFYPWMRT---------AGPERRRGRQTYSRYQTLELEK 144
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
EFH+NKYL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE ++
Sbjct: 145 EFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAAML 189
>gi|345780283|ref|XP_864678.2| PREDICTED: homeobox protein Hox-A7 isoform 5 [Canis lupus
familiaris]
Length = 239
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|194899151|ref|XP_001979124.1| GG10180 [Drosophila erecta]
gi|190650827|gb|EDV48082.1| GG10180 [Drosophila erecta]
Length = 467
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 354 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 413
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 414 TERQIKIWFQNRRMKWKKE 432
>gi|798833|emb|CAA54348.1| unnamed protein product [Drosophila melanogaster]
Length = 417
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>gi|403287989|ref|XP_003935200.1| PREDICTED: homeobox protein Hox-A7 [Saimiri boliviensis
boliviensis]
Length = 229
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNISGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|195568828|ref|XP_002102414.1| GD19518 [Drosophila simulans]
gi|194198341|gb|EDX11917.1| GD19518 [Drosophila simulans]
Length = 463
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 350 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 409
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 410 TERQIKIWFQNRRMKWKKE 428
>gi|4322040|gb|AAD15930.1| homeobox protein [Petromyzon marinus]
gi|429510506|gb|AFZ94991.1| transcription factor Hox6 [Petromyzon marinus]
Length = 248
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 237 VQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 296
V + S+SS +E + +YPWM+ ++ G +R RQTYSRYQTLELEKEF
Sbjct: 123 VGGAHSLSSPSPYEHKQTVPIYPWMQ-RMNSHNGLGLGTDRRRGRQTYSRYQTLELEKEF 181
Query: 297 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
H+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 182 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 220
>gi|296209379|ref|XP_002751497.1| PREDICTED: homeobox protein Hox-A7 [Callithrix jacchus]
gi|167427229|gb|ABZ80210.1| homeobox A7 (predicted) [Callithrix jacchus]
Length = 230
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCTSYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|24644694|ref|NP_524248.2| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45553277|ref|NP_996165.1| Sex combs reduced, isoform B [Drosophila melanogaster]
gi|68067436|sp|P09077.5|SCR_DROME RecName: Full=Homeotic protein Sex combs reduced
gi|4389425|gb|AAD19795.1| homeodomain protein [Drosophila melanogaster]
gi|7298875|gb|AAF54082.1| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45446383|gb|AAS65103.1| Sex combs reduced, isoform B [Drosophila melanogaster]
Length = 417
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQ+KIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|62526075|dbj|BAD95554.1| Hoxb-7 [Gallus gallus]
Length = 145
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 54 IYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 104
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 105 TERQIKIWFQNRRMKWKKE 123
>gi|217035832|gb|ACJ74387.1| Hox8 [Branchiostoma lanceolatum]
Length = 213
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM++ G +R RQTYSRYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 118 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGL 168
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMKLKKE ++
Sbjct: 169 TERQIKIWFQNRRMKLKKEAAML 191
>gi|301612429|ref|XP_002935718.1| PREDICTED: homeobox protein Hox-D4a-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301612431|ref|XP_002935719.1| PREDICTED: homeobox protein Hox-D4a-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 264
+P G + +G P A +P S SQQ H G+ A +YPWMK
Sbjct: 74 QPRGQTQEPSGPPEPFPAAEEHCPAPANLSSSRACSQQQHPKNGSLGKPPAIVYPWMKKV 133
Query: 265 QDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 134 HCNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKI 193
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KK+
Sbjct: 194 WFQNRRMKWKKD 205
>gi|157124731|ref|XP_001660497.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873901|gb|EAT38126.1| AAEL009949-PA [Aedes aegypti]
Length = 370
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 258 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 317
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 318 TERQIKIWFQNRRMKWKKE 336
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
Query: 214 FNMDRNGNPVGLRADSNGVG--SPDVQD-SCSVSSQQDHEGEDGATLYPWMKSNQDASYS 270
F D++G R S G+ SP Q+ S + E + +YPWM+ ++
Sbjct: 77 FLQDKDGGLASCRQTSRGLNAQSPSAQEYSLDHARGGSQEQKANVQIYPWMQ-RMNSHSG 135
Query: 271 CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRM 330
G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRM
Sbjct: 136 VGFGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRM 195
Query: 331 KLKKEKIV 338
K KKE I+
Sbjct: 196 KWKKESIL 203
>gi|62898059|dbj|BAD96969.1| homeo box B7 variant [Homo sapiens]
Length = 217
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLEL KEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELGKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|309313|gb|AAA37833.1| hox-1.1 peptide [Mus musculus]
Length = 229
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|86515396|ref|NP_001034523.1| cephalothorax [Tribolium castaneum]
gi|13241681|gb|AAK16422.1|AF321227_2 Scr [Tribolium castaneum]
gi|270002805|gb|EEZ99252.1| sex combs reduced [Tribolium castaneum]
Length = 312
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|158702290|gb|ABW77487.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+ LYPWM+ ++ + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H
Sbjct: 124 SSLLYPWMQ-RMNSCTAGTLGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHA 182
Query: 314 LQLTERQIKIWFQNRRMKLKKEKIVM 339
L LTERQIKIWFQNRRMK KKE VM
Sbjct: 183 LCLTERQIKIWFQNRRMKWKKENKVM 208
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 6/82 (7%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+SN C G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 135 TVIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 188
Query: 315 QLTERQIKIWFQNRRMKLKKEK 336
LTERQIKIWFQNRRMK KKE+
Sbjct: 189 GLTERQIKIWFQNRRMKWKKEQ 210
>gi|7229537|gb|AAF42868.1|AF227628_1 sex combs reduced Scr [Tribolium castaneum]
gi|54607266|gb|AAL26542.2| cephalothorax [Tribolium castaneum]
gi|54607268|gb|AAL27023.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|328480244|gb|AEB15973.1| ultrabithorax isoform IV [Oncopeltus fasciatus]
Length = 295
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 192 NATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQ----- 246
+A + P + P + +G+P + S+ +P + CS+++
Sbjct: 121 SAASGTPSANPLVRPAACTPDTRYLGGDGSPGAVSRTSSASLAPASWNQCSLNTTATQPA 180
Query: 247 -QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
Q H+ T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+
Sbjct: 181 GQLHQQPANHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 233
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 234 RRIEMAHALCLTERQIKIWFQNRRMKLKKE 263
>gi|158711670|ref|NP_001102703.2| homeobox protein Hox-A7 [Rattus norvegicus]
gi|392347330|ref|XP_003749804.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
gi|392356117|ref|XP_003752229.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
Length = 229
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|338227733|gb|AEI91062.1| sex combs reduced [Onthophagus binodis]
Length = 300
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 218 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 278 TERQIKIWFQNRRMKWKKE 296
>gi|390178649|ref|XP_001359213.3| Scr [Drosophila pseudoobscura pseudoobscura]
gi|388859531|gb|EAL28358.3| Scr [Drosophila pseudoobscura pseudoobscura]
Length = 426
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 313 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 372
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 373 TERQIKIWFQNRRMKWKKE 391
>gi|54607270|gb|AAL23667.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|198453463|ref|XP_002137673.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132367|gb|EDY68231.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 80/128 (62%), Gaps = 17/128 (13%)
Query: 209 GKPPGFNMDRN-GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDA 267
G PP M + G P + +G +P Q+ S SS + LYPWM+S +
Sbjct: 258 GAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE- 310
Query: 268 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 327
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 311 ---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 361
Query: 328 RRMKLKKE 335
RRMK KKE
Sbjct: 362 RRMKWKKE 369
>gi|195152057|ref|XP_002016955.1| GL22036 [Drosophila persimilis]
gi|194112012|gb|EDW34055.1| GL22036 [Drosophila persimilis]
Length = 395
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 80/128 (62%), Gaps = 17/128 (13%)
Query: 209 GKPPGFNMDRN-GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDA 267
G PP M + G P + +G +P Q+ S SS + LYPWM+S +
Sbjct: 261 GAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE- 313
Query: 268 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 327
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 314 ---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 364
Query: 328 RRMKLKKE 335
RRMK KKE
Sbjct: 365 RRMKWKKE 372
>gi|6754234|ref|NP_034585.1| homeobox protein Hox-A7 [Mus musculus]
gi|1346331|sp|P02830.2|HXA7_MOUSE RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox-1.1; AltName: Full=Homeobox protein M6-12;
Short=M6
gi|664758|gb|AAC52160.1| Hoxa7 [Mus musculus]
gi|26329169|dbj|BAC28323.1| unnamed protein product [Mus musculus]
gi|124297803|gb|AAI31979.1| Homeo box A7 [Mus musculus]
gi|124376130|gb|AAI32644.1| Homeo box A7 [Mus musculus]
gi|148666246|gb|EDK98662.1| homeobox A7, isoform CRA_c [Mus musculus]
Length = 229
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|287635|emb|CAA32637.1| unnamed protein product [Drosophila melanogaster]
Length = 415
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 302 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 361
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 362 TERQIKIWFQNRRMKWKKE 380
>gi|15825440|gb|AAL09697.1| cephalothorax [Tribolium castaneum]
Length = 268
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 156 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 216 TERQIKIWFQNRRMKWKKE 234
>gi|195110413|ref|XP_001999776.1| GI24715 [Drosophila mojavensis]
gi|193916370|gb|EDW15237.1| GI24715 [Drosophila mojavensis]
Length = 418
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 305 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 364
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 365 TERQIKIWFQNRRMKWKKE 383
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S + G KR+RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 177 IYPWMR---PMSGVAEFGFEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGL 233
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 234 TERQIKIWFQNRRMKWKKE 252
>gi|225581119|gb|ACN94690.1| GA10228 [Drosophila miranda]
Length = 345
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 232 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 291
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 292 TERQIKIWFQNRRMKWKKE 310
>gi|195038415|ref|XP_001990655.1| GH19477 [Drosophila grimshawi]
gi|193894851|gb|EDV93717.1| GH19477 [Drosophila grimshawi]
Length = 576
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 313 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 372
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 373 TERQIKIWFQNRRMKWKKE 391
>gi|21886813|ref|NP_032295.1| homeobox protein Hox-B6 [Mus musculus]
gi|62656892|ref|XP_573182.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|392331895|ref|XP_003752419.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|123253|sp|P09023.2|HXB6_MOUSE RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein MH-22A
gi|387203|gb|AAA37843.1| Hox2.2 protein, partial [Mus musculus]
gi|817962|emb|CAA39834.1| homeobox protein [Mus musculus]
gi|16877265|gb|AAH16893.1| Homeo box B6 [Mus musculus]
gi|148684079|gb|EDL16026.1| homeobox B6 [Mus musculus]
gi|149053983|gb|EDM05800.1| similar to homeotic protein Hox 2.2 - mouse (predicted) [Rattus
norvegicus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|395826618|ref|XP_003786514.1| PREDICTED: homeobox protein Hox-B6 [Otolemur garnettii]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|296202581|ref|XP_002748516.1| PREDICTED: homeobox protein Hox-B6 [Callithrix jacchus]
gi|403279477|ref|XP_003931276.1| PREDICTED: homeobox protein Hox-B6 [Saimiri boliviensis
boliviensis]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|338710910|ref|XP_003362443.1| PREDICTED: homeobox protein Hox-B6-like [Equus caballus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|431890743|gb|ELK01622.1| Homeobox protein Hox-B6 [Pteropus alecto]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|354474764|ref|XP_003499600.1| PREDICTED: homeobox protein Hox-B6-like [Cricetulus griseus]
gi|344249141|gb|EGW05245.1| Homeobox protein Hox-B6 [Cricetulus griseus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|335297812|ref|XP_003358123.1| PREDICTED: homeobox protein Hox-B6-like [Sus scrofa]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|291405869|ref|XP_002719359.1| PREDICTED: homeobox B6 [Oryctolagus cuniculus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|440910523|gb|ELR60317.1| Homeobox protein Hox-B6 [Bos grunniens mutus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|195344079|ref|XP_002038616.1| GM10524 [Drosophila sechellia]
gi|194133637|gb|EDW55153.1| GM10524 [Drosophila sechellia]
Length = 525
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 353 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 412
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 413 TERQIKIWFQNRRMKWKKE 431
>gi|444517711|gb|ELV11729.1| Homeobox protein Hox-B6 [Tupaia chinensis]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 243 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 302
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 303 TERQIKIWFQNRRMKWKKE 321
>gi|112983646|ref|NP_001037339.1| sex combs reduced homolog [Bombyx mori]
gi|4589701|dbj|BAA76868.1| Scr [Bombyx mori]
Length = 356
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 244 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 303
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 304 TERQIKIWFQNRRMKWKKE 322
>gi|170029593|ref|XP_001842676.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863995|gb|EDS27378.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 375
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 263 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 322
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 323 TERQIKIWFQNRRMKWKKE 341
>gi|217035833|gb|ACJ74388.1| Hox7 [Branchiostoma lanceolatum]
Length = 236
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 147 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 197
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 198 TERQIKIWFQNRRMKWKKE 216
>gi|327280468|ref|XP_003224974.1| PREDICTED: homeobox protein Hox-A7-like [Anolis carolinensis]
Length = 254
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 130 QAESNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 180
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 181 IAHALCLTERQIKIWFQNRRMKWKKE 206
>gi|149633997|ref|XP_001509365.1| PREDICTED: homeobox protein Hox-A7-like [Ornithorhynchus anatinus]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 118 IYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 168
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 169 TERQIKIWFQNRRMKWKKE 187
>gi|34395628|sp|Q24645.1|ANTP_DROSU RecName: Full=Homeotic protein antennapedia
gi|829192|emb|CAA43307.1| Antp [Drosophila subobscura]
Length = 394
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 297 SPLYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 350
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 351 CLTERQIKIWFQNRRMKWKKE 371
>gi|363743428|ref|XP_001236990.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B6-like
[Gallus gallus]
Length = 222
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + A +YPWM+ ++ S G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 115 ESEEQKCSAPVYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 173
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 174 RIEIAHSLCLTERQIKIWFQNRRMKWKKENKLL 206
>gi|426238970|ref|XP_004013409.1| PREDICTED: homeobox protein Hox-B6 [Ovis aries]
Length = 247
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 150 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 208
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 209 TERQIKIWFQNRRMKWKKESKLL 231
>gi|359754088|gb|AEV59511.1| HOXA7 [Macropus eugenii]
Length = 227
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 118 IYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 168
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 169 TERQIKIWFQNRRMKWKKE 187
>gi|195152067|ref|XP_002016960.1| GL22040 [Drosophila persimilis]
gi|194112017|gb|EDW34060.1| GL22040 [Drosophila persimilis]
Length = 472
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 315 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 374
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 375 TERQIKIWFQNRRMKWKKE 393
>gi|334349107|ref|XP_003342150.1| PREDICTED: homeobox protein Hox-A7-like [Monodelphis domestica]
Length = 226
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 13/103 (12%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
GS + ++ ++ SQ E +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 98 GSCEKAEASALHSQ----AETNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLEL 144
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 145 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|297715935|ref|XP_002834297.1| PREDICTED: homeobox protein Hox-B6 [Pongo abelii]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|311275740|ref|XP_003134888.1| PREDICTED: homeobox protein Hox-A7-like [Sus scrofa]
Length = 234
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADDGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|160421814|gb|ABX39491.1| AmphiHox7 [Branchiostoma floridae]
Length = 236
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 147 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 197
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 198 TERQIKIWFQNRRMKWKKE 216
>gi|345805496|ref|XP_003435306.1| PREDICTED: homeobox protein Hox-B6 [Canis lupus familiaris]
gi|281344382|gb|EFB19966.1| hypothetical protein PANDA_005013 [Ailuropoda melanoleuca]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Query: 240 SCSVSSQQDHEGEDGAT------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+ S+S QQ + A+ LYPWM+S + KR RQTY+RYQTLELE
Sbjct: 238 ASSLSQQQQGAPQSAASSNLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELE 287
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 288 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 329
>gi|158702310|gb|ABW77506.1| homeobox protein HoxB6bb [Salmo salar]
Length = 232
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+ + LYPWM+ ++ + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+
Sbjct: 125 KSSSLLYPWMQ-RMNSCTAGTFGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIS 183
Query: 312 HELQLTERQIKIWFQNRRMKLKKEKIVM 339
H L LTERQIKIWFQNRRMK KKE VM
Sbjct: 184 HALCLTERQIKIWFQNRRMKWKKENKVM 211
>gi|6706217|emb|CAB65909.1| homeobox protein [Homo sapiens]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|395540360|ref|XP_003772123.1| PREDICTED: homeobox protein Hox-A7 [Sarcophilus harrisii]
Length = 226
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 13/103 (12%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
GS + ++ ++ SQ D +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 98 GSCEKAEASALHSQADTNFR----IYPWMRS---------SGPDRKRGRQTYTRYQTLEL 144
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 145 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|380014422|ref|XP_003691231.1| PREDICTED: homeotic protein antennapedia-like [Apis florea]
Length = 350
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 256 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 305
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 306 CLTERQIKIWFQNRRMKWKKE 326
>gi|58585092|ref|NP_001011571.1| homeobox protein H90 [Apis mellifera]
gi|9967824|emb|CAC06383.1| Antennapedia protein [Apis mellifera]
Length = 352
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 307
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|390351573|ref|XP_003727685.1| PREDICTED: homeobox protein Hox-A6-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGG-GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 308
+G+ +YPWM+ + + + G +KRSR Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 164 KGQTNEQIYPWMRRIHSTTAAAQNGTEPSKRSRTAYTRYQTLELEKEFHFNRYLTRRRRI 223
Query: 309 EIAHELQLTERQIKIWFQNRRMKLKKE 335
EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 224 EIAHALGLTERQIKIWFQNRRMKWKKE 250
>gi|345312910|ref|XP_001511383.2| PREDICTED: homeobox protein Hox-B7-like [Ornithorhynchus anatinus]
Length = 222
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 73/111 (65%), Gaps = 15/111 (13%)
Query: 231 GVGSPDVQDSCSVSS--QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G G + CS + + D G+ +YPWM+S TG KR RQTY+RYQ
Sbjct: 99 GPGGDSAKPDCSKAGPRESDLAGDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQ 149
Query: 289 TLEL----EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLEL EKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 150 TLELGEGLEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 200
>gi|355753957|gb|EHH57922.1| hypothetical protein EGM_07667 [Macaca fascicularis]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|23503237|ref|NP_061825.2| homeobox protein Hox-B6 [Homo sapiens]
gi|114666344|ref|XP_001172963.1| PREDICTED: homeobox protein Hox-B6 isoform 1 [Pan troglodytes]
gi|397514558|ref|XP_003827548.1| PREDICTED: homeobox protein Hox-B6 [Pan paniscus]
gi|116242515|sp|P17509.4|HXB6_HUMAN RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein Hox-2B;
AltName: Full=Homeobox protein Hu-2
gi|11138932|gb|AAG31552.1|AF287967_2 homeobox B6 [Homo sapiens]
gi|15779175|gb|AAH14651.1| Homeobox B6 [Homo sapiens]
gi|61363527|gb|AAX42406.1| homeobox B6 [synthetic construct]
gi|119615134|gb|EAW94728.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615135|gb|EAW94729.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615136|gb|EAW94730.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615137|gb|EAW94731.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|123979658|gb|ABM81658.1| homeobox B6 [synthetic construct]
gi|158257832|dbj|BAF84889.1| unnamed protein product [Homo sapiens]
gi|208968501|dbj|BAG74089.1| homeobox B6 [synthetic construct]
gi|312150318|gb|ADQ31671.1| homeobox B6 [synthetic construct]
gi|410208932|gb|JAA01685.1| homeobox B6 [Pan troglodytes]
gi|410250610|gb|JAA13272.1| homeobox B6 [Pan troglodytes]
gi|410287208|gb|JAA22204.1| homeobox B6 [Pan troglodytes]
gi|410331361|gb|JAA34627.1| homeobox B6 [Pan troglodytes]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|60654293|gb|AAX29839.1| homeobox B6 [synthetic construct]
Length = 225
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|426347606|ref|XP_004041440.1| PREDICTED: homeobox protein Hox-B6 [Gorilla gorilla gorilla]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|49169787|ref|NP_989926.1| homeobox protein Hox-A7 [Gallus gallus]
gi|363730028|ref|XP_003640750.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|363730175|ref|XP_003640779.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|60392400|sp|Q90VZ9.1|HXA7_CHICK RecName: Full=Homeobox protein Hox-A7
gi|15553502|gb|AAL01899.1|AF408695_1 homeodomain transcription factor HoxA-7 [Gallus gallus]
gi|13872753|emb|CAC37629.1| Hoxa-7 protein [Gallus gallus]
Length = 219
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|213511004|ref|NP_001133041.1| homeobox protein HoxA4an [Salmo salar]
gi|157816065|gb|ABV82051.1| homeobox protein HoxA4an [Salmo salar]
gi|158702244|gb|ABW77453.1| homeobox protein HoxA4ab [Salmo salar]
Length = 246
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 77/105 (73%), Gaps = 8/105 (7%)
Query: 236 DVQDSCSVSSQQ---DHEGEDGATLYPWMKSNQ--DASYSCKTGGGNKRSRQTYSRYQTL 290
DV +CS++++ +G++ +YPWMK +ASYS GG KRSR Y+R Q L
Sbjct: 105 DVSKACSLATESYPGAQKGKEPPVVYPWMKKVHVVNASYS---GGVPKRSRTAYTRQQAL 161
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 162 ELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 206
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 230 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 289
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 290 TERQIKIWFQNRRMKWKKE 308
>gi|410980869|ref|XP_003996796.1| PREDICTED: homeobox protein Hox-B6 [Felis catus]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|397911070|gb|AFO68811.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 222
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 139 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 189
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 190 TERQIKIWFQNRRMKWKKE 208
>gi|355568482|gb|EHH24763.1| hypothetical protein EGK_08478 [Macaca mulatta]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|148666245|gb|EDK98661.1| homeobox A7, isoform CRA_b [Mus musculus]
Length = 223
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 84 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 134
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 135 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 181
>gi|34398398|gb|AAQ67266.1| antennapedia [Drosophila virilis]
Length = 380
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 283 SPLYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 336
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 337 CLTERQIKIWFQNRRMKWKKE 357
>gi|449268334|gb|EMC79203.1| Homeobox protein Hox-A7 [Columba livia]
Length = 219
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 118 IYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 168
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 169 TERQIKIWFQNRRMKWKKE 187
>gi|410934531|gb|AFV93982.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 199
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM++ G +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 111 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALGL 161
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMKLKKE ++
Sbjct: 162 TERQIKIWFQNRRMKLKKEAAML 184
>gi|402899485|ref|XP_003912726.1| PREDICTED: homeobox protein Hox-B6 [Papio anubis]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 708 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 766
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 767 TERQIKIWFQNRRMKWKKESKLL 789
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 381 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 431
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 432 TERQVKIWFQNRRMKWKKE 450
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 334
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 182 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 239
>gi|66476106|gb|AAX63753.2| HoxA4aii [Oncorhynchus mykiss]
Length = 250
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 82/120 (68%), Gaps = 13/120 (10%)
Query: 221 NPVGLRADSNGVGSPDVQDSCSVSSQQ---DHEGEDGATLYPWMKSNQ--DASYSCKTGG 275
NPV DS V DV CS++++ +G++ +YPWMK +A+Y+ GG
Sbjct: 95 NPV---PDSGAVA--DVSKDCSLATESYSSAQKGKEVPVVYPWMKKVHVVNATYN---GG 146
Query: 276 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + LTERQ+KIWFQNRRMK KK+
Sbjct: 147 VPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKD 206
>gi|295393193|gb|ADG03457.1| LD21370p [Drosophila melanogaster]
Length = 276
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 163 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 222
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 223 TERQIKIWFQNRRMKWKKE 241
>gi|224045306|ref|XP_002194801.1| PREDICTED: homeobox protein Hox-A7 [Taeniopygia guttata]
Length = 219
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 118 IYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 168
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 169 TERQIKIWFQNRRMKWKKE 187
>gi|32370|emb|CAA41335.1| HOX 2.2 [Homo sapiens]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|195446501|ref|XP_002070807.1| GK10826 [Drosophila willistoni]
gi|194166892|gb|EDW81793.1| GK10826 [Drosophila willistoni]
Length = 428
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 300 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 359
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 360 TERQIKIWFQNRRMKWKKE 378
>gi|405109808|emb|CCH51006.1| antennapedia, partial [Phalangium opilio]
Length = 206
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 10/91 (10%)
Query: 245 SQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
+Q + G + LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R
Sbjct: 103 AQTPNSGSLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTR 152
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 RRRIEIAHALCLTERQIKIWFQNRRMKWKKE 183
>gi|74203747|dbj|BAE23104.1| unnamed protein product [Mus musculus]
Length = 217
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQT +RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTSTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|351713532|gb|EHB16451.1| Homeobox protein Hox-B6 [Heterocephalus glaber]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|332259419|ref|XP_003278787.1| PREDICTED: homeobox protein Hox-B6-like [Nomascus leucogenys]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 186 TERQIKIWFQNRRMKWKKESKLL 208
>gi|6918885|emb|CAA59270.1| HOX 1.1 (A7) [Homo sapiens]
Length = 229
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|194742014|ref|XP_001953504.1| GF17790 [Drosophila ananassae]
gi|190626541|gb|EDV42065.1| GF17790 [Drosophila ananassae]
Length = 447
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 303 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 362
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 363 TERQIKIWFQNRRMKWKKE 381
>gi|21389049|gb|AAM50459.1|AF393443_1 antennapedia [Sacculina carcini]
Length = 369
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 12/95 (12%)
Query: 243 VSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
+++QQ + G+ L+PWM++ D KR RQTY+RYQTLELEKEFH+N+
Sbjct: 262 LNAQQQPPSQAGSPNVLFPWMRTQFD----------RKRGRQTYTRYQTLELEKEFHFNR 311
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 312 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 346
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Query: 249 HEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 308
H+ + +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 103 HQPDSHFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 153
Query: 309 EIAHELQLTERQIKIWFQNRRMKLKKE 335
EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 154 EIAHALCLTERQIKIWFQNRRMKWKKE 180
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCGDLAKGACDKADEGTLHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|351704297|gb|EHB07216.1| Homeobox protein Hox-A7 [Heterocephalus glaber]
Length = 232
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G S + +C + + G A +YPWM+S
Sbjct: 71 GLGPDAYGNLPCASYDQNIPGFCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|284005071|ref|NP_001164873.1| homeobox protein Hox-A7 [Oryctolagus cuniculus]
gi|217418309|gb|ACK44311.1| homeobox A7 (predicted) [Oryctolagus cuniculus]
Length = 235
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ + +C + + G A +YPWM+S
Sbjct: 71 GLGTDAYGNLPCASYDQNIPGLCGDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|109944934|dbj|BAE96995.1| Antennapedia [Moina macrocopa]
Length = 528
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 9/85 (10%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G+ + LYPWM+S Q A KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEI
Sbjct: 430 GDQDSPLYPWMRS-QFAE--------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEI 480
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 481 AHALCLTERQIKIWFQNRRMKWKKE 505
>gi|429510508|gb|AFZ94992.1| transcription factor Hox7 [Petromyzon marinus]
Length = 227
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G +YPWM+S + +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 137 GLRIYPWMRSTAGSP-------DRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHA 189
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 190 LCLTERQIKIWFQNRRMKWKKE 211
>gi|431909016|gb|ELK12607.1| Homeobox protein Hox-A7 [Pteropus alecto]
Length = 232
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 77/127 (60%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKVDEGALHGPAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLPRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|195389692|ref|XP_002053510.1| antennapedia [Drosophila virilis]
gi|194151596|gb|EDW67030.1| antennapedia [Drosophila virilis]
Length = 376
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 283 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 332
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 333 CLTERQIKIWFQNRRMKWKKE 353
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 268 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 317
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 318 CLTERQIKIWFQNRRMKWKKE 338
>gi|195038411|ref|XP_001990653.1| GH19475 [Drosophila grimshawi]
gi|193894849|gb|EDV93715.1| GH19475 [Drosophila grimshawi]
Length = 385
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 292 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 341
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 342 CLTERQIKIWFQNRRMKWKKE 362
>gi|306965454|emb|CBK55568.1| antennapedia [Glomeris marginata]
Length = 201
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 13/90 (14%)
Query: 246 QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
Q G G+ LYPWM+ KR RQTY+RYQTLELEKEFH+N+YL+R+
Sbjct: 106 QSPGAGSLGSPLYPWMRKR-------------KRGRQTYTRYQTLELEKEFHFNRYLTRR 152
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 182
>gi|334322795|ref|XP_003340303.1| PREDICTED: homeobox protein Hox-B6-like [Monodelphis domestica]
Length = 223
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + +YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 116 ESEEQKCSTPVYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 174
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 175 RIEIAHALCLTERQIKIWFQNRRMKWKKENKML 207
>gi|195110409|ref|XP_001999774.1| GI24713 [Drosophila mojavensis]
gi|193916368|gb|EDW15235.1| GI24713 [Drosophila mojavensis]
Length = 378
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 285 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 334
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 335 CLTERQIKIWFQNRRMKWKKE 355
>gi|58382029|ref|XP_311618.2| AGAP004660-PA [Anopheles gambiae str. PEST]
gi|3420836|gb|AAC31945.1| Antennapedia homeotic protein [Anopheles gambiae]
gi|55242653|gb|EAA07256.2| AGAP004660-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 232 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 281
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 282 CLTERQIKIWFQNRRMKWKKE 302
>gi|193620095|ref|XP_001947187.1| PREDICTED: homeotic protein antennapedia-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 10/102 (9%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P +Q + + Q + + LYPWM+S + KR RQTY+RYQTLELE
Sbjct: 275 TPPLQTPTAQNQQAVNNNSLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELE 324
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 325 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 366
>gi|217035828|gb|ACJ74384.1| Hox6 [Branchiostoma lanceolatum]
Length = 227
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 174 TERQIKIWFQNRRMKWKKE 192
>gi|359754099|gb|AEV59521.1| HOXB6 [Macropus eugenii]
Length = 223
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + +YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 116 ESEEQKCSTPVYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 174
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 175 RIEIAHALCLTERQIKIWFQNRRMKWKKENKML 207
>gi|148226630|ref|NP_001090379.1| homeobox B6 [Xenopus laevis]
gi|116063408|gb|AAI23271.1| Hoxb6 protein [Xenopus laevis]
Length = 223
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Query: 243 VSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYL 302
V +QD E + +YPWM+ ++ S G +R RQTY+RYQTLELEKEFH+N+YL
Sbjct: 113 VYEEQD-EAKCATPVYPWMQ-RMNSCNSSMFGPSGRRGRQTYTRYQTLELEKEFHFNRYL 170
Query: 303 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
+R+RRIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 171 TRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKESKLL 207
>gi|395532700|ref|XP_003768406.1| PREDICTED: homeobox protein Hox-B6 [Sarcophilus harrisii]
Length = 223
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + +YPWM+ ++ S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 116 ESEEQKCSTPVYPWMQ-RMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 174
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 175 RIEIAHALCLTERQIKIWFQNRRMKWKKENKML 207
>gi|383849605|ref|XP_003700435.1| PREDICTED: homeotic protein antennapedia-like [Megachile rotundata]
Length = 352
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|88604714|gb|ABD46728.1| homeobox protein sex comb reduced [Endeis spinosa]
Length = 265
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
D P+ QDS S+S ++ +YPWM+ G KR R +Y+RY
Sbjct: 138 DPRSTSPPNSQDSKSIS-------QNTPQIYPWMRKVHIGQNGISNGMETKRQRTSYTRY 190
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 191 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 238
>gi|220898183|gb|ACL81439.1| HoxA7 [Latimeria menadoensis]
Length = 212
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 9/84 (10%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
E+ +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 115 ENNFRIYPWMRS---------SGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 165
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KKE
Sbjct: 166 HALCLTERQIKIWFQNRRMKWKKE 189
>gi|281182594|ref|NP_001162369.1| homeobox protein Hox-A7 [Papio anubis]
gi|160904220|gb|ABX52204.1| homeobox A7 (predicted) [Papio anubis]
gi|355747754|gb|EHH52251.1| hypothetical protein EGM_12667 [Macaca fascicularis]
Length = 230
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
G+ S + +C + + G A +YPWM+S +G KR RQTY+RYQ
Sbjct: 91 GLCSDLAKGACDKADEGVLHGPAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQ 141
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 142 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 188
>gi|270065291|gb|ACZ60640.1| sex combs reduced [Oncopeltus fasciatus]
Length = 302
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 253
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 254 TERQIKIWFQNRRMKWKKE 272
>gi|260835435|ref|XP_002612714.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
gi|160421813|gb|ABX39490.1| AmphiHox6 [Branchiostoma floridae]
gi|229298093|gb|EEN68723.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
Length = 227
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 174 TERQIKIWFQNRRMKWKKE 192
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
LYPWM+S Q A KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 535 LYPWMRS-QFAE--------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCL 585
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 586 TERQIKIWFQNRRMKWKKE 604
>gi|520616|emb|CAA84518.1| Hox-6 homeodomain protein [Branchiostoma floridae]
gi|745778|prf||2016458E Hox-6 gene
Length = 227
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 174 TERQIKIWFQNRRMKWKKE 192
>gi|340727738|ref|XP_003402194.1| PREDICTED: homeotic protein antennapedia [Bombus terrestris]
gi|325305997|gb|ADZ11103.1| antennapedia-like protein [Bombus terrestris]
Length = 352
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|332692470|gb|AEE90152.1| Homeobox A7a [Anguilla anguilla]
Length = 236
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 65/82 (79%), Gaps = 7/82 (8%)
Query: 257 LYPWMKSNQDASYSCKTGGG---NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
LYPWM+S S +T G KR RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 114 LYPWMRS----SGMLRTARGYPERKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHA 169
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 170 LCLTERQIKIWFQNRRMKWKKD 191
>gi|86515340|ref|NP_001034497.1| ultrabithorax [Tribolium castaneum]
gi|18535622|gb|AAL71874.1| ultrabithorax [Tribolium castaneum]
gi|270002802|gb|EEZ99249.1| ultrabithorax [Tribolium castaneum]
Length = 314
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
Query: 206 MVDGKP---PGFNMDRNGNPVGLR--ADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPW 260
+V G P PG R GN + N S V + Q +H T YPW
Sbjct: 157 LVGGDPASSPGAAAGRTGNSLSWNNPCSINSTSSQPV--GTQIHQQTNH------TFYPW 208
Query: 261 MKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 320
M ++ G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQ
Sbjct: 209 MAIADSMTFGAN--GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 266
Query: 321 IKIWFQNRRMKLKKE 335
IKIWFQNRRMKLKKE
Sbjct: 267 IKIWFQNRRMKLKKE 281
>gi|321475842|gb|EFX86804.1| putative homeotic Antennapedia protein [Daphnia pulex]
Length = 657
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
LYPWM+S Q A KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 565 LYPWMRS-QFAE--------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCL 615
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 616 TERQIKIWFQNRRMKWKKE 634
>gi|294610346|dbj|BAJ05331.1| homeotic protein Sex combs reduced [Daphnia magna]
Length = 444
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 330 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 389
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 390 SERQIKIWFQNRRMKWKKE 408
>gi|400180325|gb|AFP73293.1| Hoxa7alpha [Polyodon spathula]
Length = 210
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
+H+ E +YPWM++ +GG KR RQ Y+RYQTLELEKEFH+++YL+R+RR
Sbjct: 111 NHQSEGHFEMYPWMRT---------SGGDGKRGRQNYTRYQTLELEKEFHFSRYLTRRRR 161
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKEKI 337
+EIAH L LTERQIKIWFQNRRMK KKE +
Sbjct: 162 VEIAHALCLTERQIKIWFQNRRMKWKKEHM 191
>gi|34484444|gb|AAQ72844.1| HoxB6b [Sphoeroides nephelus]
Length = 233
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 34/192 (17%)
Query: 177 NHTDYLRTNSDKETLNATNFVPKDEAISE-MVDGKPPGFNMDRNGNPVGLRADSNGVGS- 234
+TD LR S+ T A N K S G + G P + N VG+
Sbjct: 31 GYTDPLRHYSNAATYGAANMQEKVYPASYYQQTGAAAIYGRAGGGAPC----EYNPVGTF 86
Query: 235 -PDVQDSCSVSSQQDH--------------------------EGEDGATLYPWMKSNQDA 267
D + SC+ SS++D + + +YPWM+ +A
Sbjct: 87 YKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQSVSMGSSIDDKSSTLIYPWMQ-RMNA 145
Query: 268 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 327
+ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTERQIKIWFQN
Sbjct: 146 CSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQN 205
Query: 328 RRMKLKKEKIVM 339
RRMK KKE ++
Sbjct: 206 RRMKWKKENKLL 217
>gi|14916600|sp|Q9PWD2.1|HXA4_MORSA RecName: Full=Homeobox protein Hox-A4
gi|5669605|gb|AAD46399.1|AF089743_5 homeodomain protein Hox-A4 [Morone saxatilis]
Length = 248
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 9/117 (7%)
Query: 225 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNK 278
L A +G + CS++S+ G +YPWMK S +ASY TGG K
Sbjct: 94 LTAAPDGGAGANASKDCSLASEVYPGVAKGKEPVVYPWMKKVHVSTVNASY---TGGVPK 150
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 151 RSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 207
>gi|301617259|ref|XP_002938066.1| PREDICTED: homeobox protein Hox-B6 [Xenopus (Silurana) tropicalis]
Length = 223
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 246 QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
++ E + +YPWM+ ++ S G +R RQTY+RYQTLELEKEFH+N+YL+R+
Sbjct: 115 EEQDEAKCATPVYPWMQ-RMNSCNSSVFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRR 173
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RRIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 174 RRIEIAHSLCLTERQIKIWFQNRRMKWKKESKLL 207
>gi|88604720|gb|ABD46731.1| homeobox protein antennapedia [Endeis spinosa]
Length = 203
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 17/114 (14%)
Query: 229 SNGVGSPDVQDSCSVSSQQ-------DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSR 281
S G+G +V S S Q + G + LYPWM+S + KR R
Sbjct: 84 SGGLGGANVPPSPVHSPQMYNHHQSITNSGVLPSPLYPWMRSQFE----------RKRGR 133
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 134 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|350405515|ref|XP_003487458.1| PREDICTED: homeotic protein antennapedia-like [Bombus impatiens]
Length = 351
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|357626567|gb|EHJ76618.1| antennapedia-like proteinue protein [Danaus plexippus]
Length = 303
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 210 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 259
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 260 CLTERQIKIWFQNRRMKWKKE 280
>gi|213512343|ref|NP_001135147.1| homeobox protein HoxB6ba [Salmo salar]
gi|157816119|gb|ABV82078.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+ LYPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H
Sbjct: 124 SSLLYPWMQRMSSCT-AGTLGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHA 182
Query: 314 LQLTERQIKIWFQNRRMKLKKEKIVM 339
L LTERQIK WFQNRRMK KKE VM
Sbjct: 183 LCLTERQIKTWFQNRRMKWKKENKVM 208
>gi|397911072|gb|AFO68812.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 127
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 76/115 (66%), Gaps = 18/115 (15%)
Query: 225 LRADSNGVGS----PDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRS 280
+R D GVG P Q + ++++ Q +YPWM+S T KR
Sbjct: 7 VRKDMAGVGGHPGHPVQQANPALNTAQM-----TTPIYPWMRS---------TAPERKRG 52
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 53 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 107
>gi|321475844|gb|EFX86806.1| LOW QUALITY PROTEIN: putative homeotic Sex combs reduced protein
[Daphnia pulex]
Length = 440
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 326 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 385
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 386 SERQIKIWFQNRRMKWKKE 404
>gi|170029597|ref|XP_001842678.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863997|gb|EDS27380.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 331
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 239 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 288
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 289 CLTERQIKIWFQNRRMKWKKE 309
>gi|410895279|ref|XP_003961127.1| PREDICTED: homeobox protein Hox-B6b-like [Takifugu rubripes]
gi|119370788|sp|Q1KKX1.1|HXB6B_FUGRU RecName: Full=Homeobox protein Hox-B6b
gi|94482806|gb|ABF22423.1| homeobox protein HoxB6b [Takifugu rubripes]
Length = 233
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
SVS + + +YPWM+ +A + G +R RQTY+RYQTLELEKEFH+N+Y
Sbjct: 121 SVSMGSSIDDKSSTLIYPWMQ-RMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRY 179
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
L+R+RRIEI+H L LTERQIKIWFQNRRMK KKE ++
Sbjct: 180 LTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKLL 217
>gi|400180337|gb|AFP73304.1| Hoxa7beta [Polyodon spathula]
Length = 210
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 83/129 (64%), Gaps = 16/129 (12%)
Query: 212 PGFNM-----DRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQD 266
PG+N+ +R+ N + NG P+ + + + EG +YPWM++
Sbjct: 69 PGYNLGLEAYNRHCNSLDQNILYNGPSKPNCERTDPANLNPRSEGH--FQMYPWMRT--- 123
Query: 267 ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQ 326
+GG KR RQTY+RYQTLELEKEFH+++YL+R+RR+E+AH L LTERQIKIWFQ
Sbjct: 124 ------SGGDRKRGRQTYTRYQTLELEKEFHFSRYLTRRRRVEVAHALCLTERQIKIWFQ 177
Query: 327 NRRMKLKKE 335
NRRMK KKE
Sbjct: 178 NRRMKWKKE 186
>gi|157124729|ref|XP_001660496.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873900|gb|EAT38125.1| AAEL009947-PA [Aedes aegypti]
Length = 325
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 233 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 282
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 283 CLTERQIKIWFQNRRMKWKKE 303
>gi|17922001|gb|AAK06846.2| abdominal-A protein [Myrmica rubra]
Length = 394
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 243 VSSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 226 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 285
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 286 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 326
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 246 QQDHEGEDGATLYPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|397911068|gb|AFO68810.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 144
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 34 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 90
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 91 TERQIKIWFQNRRMKWKKE 109
>gi|328706300|ref|XP_003243055.1| PREDICTED: homeotic protein antennapedia-like isoform 2
[Acyrthosiphon pisum]
Length = 393
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P +Q + + Q + + LYPWM+S KR RQTY+RYQTLELE
Sbjct: 275 TPPLQTPTAQNQQAVNNNSLPSPLYPWMRSQFGPDSE------RKRGRQTYTRYQTLELE 328
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 329 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 370
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 246 QQDHEGEDGATLYPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|88604722|gb|ABD46732.1| homeobox protein antennapedia [Nymphon gracile]
Length = 129
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 73/117 (62%), Gaps = 18/117 (15%)
Query: 227 ADSNGVGSPDVQDSCSVSSQQ--------DHEGEDGATLYPWMKSNQDASYSCKTGGGNK 278
+ GVG V S S Q + G + LYPWM+S + K
Sbjct: 7 SSGQGVGGATVPPSPVHSPQMYNHHQSITNSAGVLPSPLYPWMRSQFE----------RK 56
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 57 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 113
>gi|348522363|ref|XP_003448694.1| PREDICTED: homeobox protein Hox-B6b-like [Oreochromis niloticus]
gi|154183845|gb|ABS70784.1| Hoxb6b [Haplochromis burtoni]
Length = 235
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+VS + + +YPWM+ +A + G +R RQTY+RYQTLELEKEFH+N+Y
Sbjct: 123 AVSMSSSIDDKSSTLIYPWMQ-RMNACSAGPFGSSGRRGRQTYTRYQTLELEKEFHFNRY 181
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
L+R+RRIEI+H L LTERQIKIWFQNRRMK KKE ++
Sbjct: 182 LTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKLL 219
>gi|109944950|dbj|BAE97005.1| Antennapedia [Procambarus clarkii]
Length = 333
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 28/124 (22%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDG----------------ATLYPWMKSNQDASYSC 271
D NG G P QD+ + QDH+G + LYPWM+S
Sbjct: 200 DPNG-GPP--QDTSLHMAAQDHQGWGAQQQPQQQQQNASSALPSPLYPWMRSQ------- 249
Query: 272 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 331
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQ+RRMK
Sbjct: 250 --FAERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQDRRMK 307
Query: 332 LKKE 335
KKE
Sbjct: 308 WKKE 311
>gi|332024150|gb|EGI64366.1| Homeotic protein antennapedia [Acromyrmex echinatior]
Length = 352
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|15450324|gb|AAK96031.1| homeodomain transcription factor Prothoraxless [Tribolium
castaneum]
gi|270002803|gb|EEZ99250.1| antennapedia [Tribolium castaneum]
Length = 323
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 230 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 279
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 280 CLTERQIKIWFQNRRMKWKKE 300
>gi|58382033|ref|XP_311624.2| AGAP004661-PB [Anopheles gambiae str. PEST]
gi|3420832|gb|AAC31943.1| Ultrabithorax homeotic protein IVa [Anopheles gambiae]
gi|55242654|gb|EAA07259.2| AGAP004661-PB [Anopheles gambiae str. PEST]
Length = 310
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 208 DGKPPGFNMDRNGNPV---GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGA-------TL 257
D + G+ G+PV G A + GV + CS++ + T
Sbjct: 147 DSRVGGYIDASGGSPVSRAGSAAAATGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LT
Sbjct: 207 YPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLT 259
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 260 ERQIKIWFQNRRMKLKKE 277
>gi|383209610|emb|CCE45703.1| antennapedia [Parasteatoda tepidariorum]
Length = 327
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 226 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 275
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 276 CLTERQIKIWFQNRRMKWKKE 296
>gi|340727727|ref|XP_003402189.1| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Bombus
terrestris]
Length = 395
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 243 VSSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 286
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 287 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 327
>gi|18079282|ref|NP_536748.1| ultrabithorax, isoform B [Drosophila melanogaster]
gi|7300190|gb|AAF55356.1| ultrabithorax, isoform B [Drosophila melanogaster]
Length = 346
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 17/126 (13%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNQDASY 269
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 245
Query: 270 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 329
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 246 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 304
Query: 330 MKLKKE 335
MKLKKE
Sbjct: 305 MKLKKE 310
>gi|360043143|emb|CCD78555.1| hox protein Smox1 [Schistosoma mansoni]
Length = 842
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 246 QQDHEGEDGATLYPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|213513838|ref|NP_001133031.1| homeobox protein HoxD4ab [Salmo salar]
gi|157816029|gb|ABV82033.1| homeobox protein HoxD4ab [Salmo salar]
gi|158702378|gb|ABW77564.1| homeobox protein HoxD4ab [Salmo salar]
Length = 236
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G R+ NP A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHVQGRDSNPSTFTAQTEPCAPVQVTGPRTCGQQQNTKNQNGIQAKQPAVVYPWMKK 131
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 191
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 192 IWFQNRRMKWKKD 204
>gi|505633|gb|AAA19240.1| sex combs reduced homeodomain protein [Drosophila melanogaster]
Length = 415
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 302 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 361
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQ+RRMK KKE
Sbjct: 362 TERQIKIWFQDRRMKWKKE 380
>gi|170070071|ref|XP_001869455.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167865904|gb|EDS29287.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 361
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 271 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 320
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 321 TERQIKIWFQNRRMKWKKE 339
>gi|195570298|ref|XP_002103144.1| ultrabithorax [Drosophila simulans]
gi|194199071|gb|EDX12647.1| ultrabithorax [Drosophila simulans]
Length = 338
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 17/126 (13%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNQDASY 269
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 185 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 237
Query: 270 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 329
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 238 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 296
Query: 330 MKLKKE 335
MKLKKE
Sbjct: 297 MKLKKE 302
>gi|112983708|ref|NP_001037319.1| antennapedia homologue protein [Bombyx mori]
gi|391615|dbj|BAA04087.1| Antennapedia homologue protein [Bombyx mori]
gi|426204115|gb|AFY12623.1| antennapedia-like protein [Bombyx mori]
Length = 259
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 166 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 215
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 216 CLTERQIKIWFQNRRMKWKKE 236
>gi|969088|gb|AAA84410.1| UBXIVA [Drosophila melanogaster]
Length = 346
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 17/126 (13%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNQDASY 269
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 245
Query: 270 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 329
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 246 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 304
Query: 330 MKLKKE 335
MKLKKE
Sbjct: 305 MKLKKE 310
>gi|291290871|ref|NP_001167466.1| homeobox D4 [Xenopus laevis]
gi|83405607|gb|AAI10766.1| Unknown (protein for MGC:131092) [Xenopus laevis]
Length = 237
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 264
+P G + +G A + +P S SQQ H G+ A +YPWMK
Sbjct: 74 QPRGHAQEPSGPQEPFAAADDHCPAPATLSSSRGCSQQQHPKNGTLGKPPAIVYPWMKKV 133
Query: 265 QDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 134 HVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKI 193
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KK+
Sbjct: 194 WFQNRRMKWKKD 205
>gi|317419676|emb|CBN81713.1| Homeobox protein Hox-B6b [Dicentrarchus labrax]
Length = 275
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+VS + + +YPWM+ +A + G +R RQTY+RYQTLELEKEFH+N+Y
Sbjct: 125 TVSMSSSIDDKSSTLIYPWMQ-RMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRY 183
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
L+R+RRIEI+H L LTERQIKIWFQNRRMK KKE ++
Sbjct: 184 LTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKLL 221
>gi|306878|gb|AAA36003.1| homeobox c1 protein [Homo sapiens]
Length = 217
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YP M+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPSMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|109944940|dbj|BAE96998.1| Ultrabithorax [Artemia franciscana]
gi|109944943|dbj|BAE97000.1| Ultrabithorax [Artemia franciscana]
Length = 280
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
Query: 221 NPVGLRAD----SNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGG 276
+P L A+ SNG V QQ + A YPWM G
Sbjct: 130 SPCSLSANNSNASNGSRPQTVPQGQGTPEQQHSPSQQPAAFYPWMAI-------AGANGL 182
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 183 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 241
>gi|109944953|dbj|BAE97007.1| Antennapedia [Procambarus clarkii]
Length = 278
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 28/124 (22%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDG----------------ATLYPWMKSNQDASYSC 271
D NG G P QD+ + QDH+G + LYPWM+S
Sbjct: 145 DPNG-GPP--QDTSLHMAAQDHQGWGAQQQPQQQQQNASSALPSPLYPWMRSQ------- 194
Query: 272 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 331
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQ+RRMK
Sbjct: 195 --FAERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQDRRMK 252
Query: 332 LKKE 335
KKE
Sbjct: 253 WKKE 256
>gi|74267555|dbj|BAE44276.1| hoxB6b [Oryzias latipes]
gi|83016956|dbj|BAE53481.1| hoxB6b [Oryzias latipes]
Length = 231
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 83/141 (58%), Gaps = 33/141 (23%)
Query: 227 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 258
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 80 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQTVSMSSSIDDKSSTLIY 139
Query: 259 PWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
PWM+ +C G G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 140 PWMQRMN----ACSAGDG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 194
Query: 319 RQIKIWFQNRRMKLKKEKIVM 339
RQIKIWFQNRRMK KKE ++
Sbjct: 195 RQIKIWFQNRRMKWKKENKLL 215
>gi|426227776|ref|XP_004007991.1| PREDICTED: homeobox protein Hox-A6 [Ovis aries]
Length = 233
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS SV + H EG D + +YPWM+ S G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCS-GAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|357626566|gb|EHJ76617.1| putative fushi-tarazu-like protein [Danaus plexippus]
Length = 433
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 75/134 (55%), Gaps = 30/134 (22%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGA----------------TLYPWMKSNQD 266
V ++ GV D S S E G YPWMKS
Sbjct: 236 VKIKRSVGGVSDTKTSDELSASCHDVTRVESGGDEDYNDSKMATAPDVQGFYPWMKS--- 292
Query: 267 ASYSCKTGG-----GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQI 321
GG G+KR+RQTY+R+QTLELEKEFH+NKYLSR+RRIE++H L LTERQI
Sbjct: 293 ------IGGDDKKEGSKRTRQTYTRFQTLELEKEFHFNKYLSRRRRIEVSHALGLTERQI 346
Query: 322 KIWFQNRRMKLKKE 335
KIWFQNRRMK KK+
Sbjct: 347 KIWFQNRRMKAKKD 360
>gi|18307794|gb|AAL67686.1|AF435787_1 ultrabithorax [Artemia franciscana]
Length = 279
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
Query: 221 NPVGLRAD----SNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGG 276
+P L A+ SNG V QQ + A YPWM G
Sbjct: 129 SPCSLSANNSNASNGSRPQTVPQGQGTPEQQHSPSQQPAAFYPWMAI-------AGANGL 181
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 182 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 240
>gi|432925212|ref|XP_004080699.1| PREDICTED: homeobox protein Hox-B6b-like [Oryzias latipes]
Length = 235
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 29/141 (20%)
Query: 227 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 258
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 80 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQTVSMSSSIDDKSSTLIY 139
Query: 259 PWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
PWM+ +A + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 140 PWMQ-RMNACSAGPFGTSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 198
Query: 319 RQIKIWFQNRRMKLKKEKIVM 339
RQIKIWFQNRRMK KKE ++
Sbjct: 199 RQIKIWFQNRRMKWKKENKLL 219
>gi|385654491|gb|AFI61990.1| Hox-B6b [Anguilla japonica]
Length = 227
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
E + A +YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 124 EMKSSAPVYPWMQRMN----SCNGTFGNTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 179
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 180 IEIAHALCLTERQIKIWFQNRRMKWKKE 207
>gi|86515364|ref|NP_001034505.1| prothoraxless [Tribolium castaneum]
gi|7767519|gb|AAF69136.1|AF228509_1 prothoraxless [Tribolium castaneum]
Length = 325
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 234 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 284 TERQIKIWFQNRRMKWKKE 302
>gi|410262404|gb|JAA19168.1| homeobox A6 [Pan troglodytes]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS S + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|332692498|gb|AEE90177.1| Homeobox B6b [Anguilla anguilla]
Length = 227
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
E + A +YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 124 EMKSSAPVYPWMQRMN----SCNGTFGNTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 179
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 180 IEIAHALCLTERQIKIWFQNRRMKWKKE 207
>gi|66476105|gb|AAX63752.2| HoxA4ai [Oncorhynchus mykiss]
Length = 207
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 8/105 (7%)
Query: 236 DVQDSCSVSSQ---QDHEGEDGATLYPWMKSNQ--DASYSCKTGGGNKRSRQTYSRYQTL 290
DV CS++++ +G++ +YPWMK +ASYS GG KRSR Y+R Q L
Sbjct: 105 DVSKDCSLATECYPGAQKGKEPPVVYPWMKKVHVVNASYS---GGVPKRSRTAYTRQQAL 161
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 162 ELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 206
>gi|3581956|emb|CAA64693.1| DthoxE [Girardia tigrina]
Length = 329
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 4/80 (5%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWM ++ ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 209 VVYPWMNPKMNS----ESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALS 264
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 265 LTERQIKIWFQNRRMKWKKD 284
>gi|410952526|ref|XP_003982930.1| PREDICTED: homeobox protein Hox-A6 isoform 2 [Felis catus]
Length = 249
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|1098678|gb|AAB03236.1| homeotic protein [Schistocerca americana]
Length = 331
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 235 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 284
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 285 CLTERQIKIWFQNRRMKWKKE 305
>gi|383849764|ref|XP_003700507.1| PREDICTED: uncharacterized protein LOC100875892 [Megachile
rotundata]
Length = 375
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 258 YPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
YPWMKS N D + G G KR+RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA L
Sbjct: 200 YPWMKSSYANGDTN-----GAGQKRTRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAQAL 254
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 255 CLTERQIKIWFQNRRMKAKKD 275
>gi|14916597|sp|Q9IA25.1|HXA7_HETFR RecName: Full=Homeobox protein Hox-A7
gi|7271834|gb|AAF44645.1|AF224262_7 HoxA7 [Heterodontus francisci]
Length = 208
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKE 193
>gi|397911066|gb|AFO68809.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 215
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 225 LRADS-NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQT 283
L+A+S + + S V +V +Q + + PWM+ S G KR RQT
Sbjct: 80 LQANSPSPLPSAQVSPGSTVGAQLP---QPTPPVSPWMR---KGSSQTAMGEEKKRGRQT 133
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+NKYL+RKRRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 134 YTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKKE 185
>gi|345489557|ref|XP_003426162.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Nasonia vitripennis]
Length = 413
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Query: 244 SSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKE 295
S QQ G+ G YPWM S D G +R RQTY+R+QTLELEKE
Sbjct: 238 SCQQPTAGQPGIPEIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKE 297
Query: 296 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
FH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 298 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 337
>gi|300797581|ref|NP_001178016.1| homeobox protein Hox-A6 [Rattus norvegicus]
gi|392347326|ref|XP_003749802.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|392356113|ref|XP_003752227.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|149033362|gb|EDL88163.1| rCG52456 [Rattus norvegicus]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + HE G D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|254212175|gb|ACT65750.1| Hoxa7 [Leucoraja erinacea]
Length = 208
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKE 193
>gi|431909015|gb|ELK12606.1| Homeobox protein Hox-A6 [Pteropus alecto]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|26984636|emb|CAD59113.1| SI:dZ254O17.3 (homeo box protein B6a) [Danio rerio]
gi|190339534|gb|AAI62839.1| Homeo box B6a [Danio rerio]
gi|190339552|gb|AAI62846.1| Homeo box B6a [Danio rerio]
Length = 228
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
E + A +YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 125 EQKPSAPVYPWMQRMN----SCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 181 IEIAHALCLTERQIKIWFQNRRMKWKKE 208
>gi|255742433|gb|ACU32548.1| homeobox protein HoxA7 [Callorhinchus milii]
Length = 212
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKE 193
>gi|449277039|gb|EMC85346.1| Homeobox protein Hox-B4, partial [Columba livia]
Length = 225
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 72/110 (65%), Gaps = 10/110 (9%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGA---TLYPWMK----SNQDASYSCKTGGGNKRSRQTYS 285
G+P SCS +S +YPWMK S + +YS GG KRSR Y+
Sbjct: 102 GTPSPPPSCSQNSLNQSPASSSCKEPVVYPWMKKVHVSTVNPNYS---GGEPKRSRTAYT 158
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 159 RQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 208
>gi|73976527|ref|XP_854141.1| PREDICTED: homeobox protein Hox-A6 [Canis lupus familiaris]
gi|358411873|ref|XP_003582149.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|359064775|ref|XP_003586029.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|410952524|ref|XP_003982929.1| PREDICTED: homeobox protein Hox-A6 isoform 1 [Felis catus]
gi|281349541|gb|EFB25125.1| hypothetical protein PANDA_000658 [Ailuropoda melanoleuca]
gi|440899268|gb|ELR50597.1| Homeobox protein Hox-A6 [Bos grunniens mutus]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|45553381|ref|NP_996219.1| ultrabithorax, isoform F [Drosophila melanogaster]
gi|45446510|gb|AAS65158.1| ultrabithorax, isoform F [Drosophila melanogaster]
Length = 355
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 83/130 (63%), Gaps = 16/130 (12%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWM----KSNQ 265
NGN G+++ G+ ++ C++S H+ + T YPWM + +
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAIAGECPE 251
Query: 266 DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWF 325
D + S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWF
Sbjct: 252 DPTKS--TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWF 309
Query: 326 QNRRMKLKKE 335
QNRRMKLKKE
Sbjct: 310 QNRRMKLKKE 319
>gi|18858839|ref|NP_571194.1| homeobox protein Hox-B6a [Danio rerio]
gi|123250|sp|P15861.1|HXB6A_DANRE RecName: Full=Homeobox protein Hox-B6a; Short=Hox-B6; AltName:
Full=Homeobox protein Zf-22
gi|62536|emb|CAA48319.1| homeodomain protein [Danio rerio]
gi|313688|emb|CAA35171.1| Hox 2.2 [Danio rerio]
Length = 228
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
E + A +YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 125 EQKPSAPVYPWMQRMN----SCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 181 IEIAHALCLTERQIKIWFQNRRMKWKKE 208
>gi|226822850|gb|ACO83085.1| homeobox A6 (predicted) [Dasypus novemcinctus]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + HE G D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|301128873|emb|CBL59337.1| HoxA7 [Scyliorhinus canicula]
Length = 208
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKE 193
>gi|284005067|ref|NP_001164872.1| homeobox protein Hox-A6 [Oryctolagus cuniculus]
gi|217418308|gb|ACK44310.1| homeobox A6 (predicted) [Oryctolagus cuniculus]
Length = 227
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 11/109 (10%)
Query: 234 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS V + HE G D + +YPWM+ SC G KR+R Y+R
Sbjct: 106 SPEQQYKPDSSGVQGKALHEEGTDRKYTSPVYPWMQRMN----SCAGGPEGKRARTAYTR 161
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 162 YQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 210
>gi|395830946|ref|XP_003788573.1| PREDICTED: homeobox protein Hox-A6 [Otolemur garnettii]
gi|202070728|gb|ACH95316.1| homeobox A6 (predicted) [Otolemur garnettii]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS SV + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKALHDEGADRKYTSPVYPWMQ-RMNSCTGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|254212177|gb|ACT65752.1| Hoxa5 [Leucoraja erinacea]
Length = 275
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Query: 230 NGVG-SPDVQDSCSVSS----QQDHEG--EDGATLYPWMKSNQDASYSCKTGGGNKRSRQ 282
+GVG SP +D SS Q+ +G + +YPWM+ S+ G KR+R
Sbjct: 147 DGVGTSPGTEDDTPASSDPPSSQNGQGTAQQQPQIYPWMR-KLHISHDSMGGPEGKRART 205
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 258
>gi|410934527|gb|AFV93980.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 272
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 76/118 (64%), Gaps = 11/118 (9%)
Query: 227 ADSNGVGSPDVQDSCSVSSQ---------QDHEGEDGATLYPWMKSNQDASYSCKTGGGN 277
D VGSP+ + + S Q +YPWM+ + ++S TG N
Sbjct: 145 VDLESVGSPNATATAAGSVQPSNNNTANNTASTSPSNIPMYPWMRKIR-LNHSAGTGD-N 202
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 203 KRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 260
>gi|350405517|ref|XP_003487459.1| PREDICTED: hypothetical protein LOC100747162 [Bombus impatiens]
Length = 372
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G + +Y WMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 254 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 313
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 314 AHALCLTERQIKIWFQNRRMKWKKE 338
>gi|340727747|ref|XP_003402198.1| PREDICTED: hypothetical protein LOC100643224 [Bombus terrestris]
Length = 372
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G + +Y WMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 254 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 313
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 314 AHALCLTERQIKIWFQNRRMKWKKE 338
>gi|262263017|gb|ACY39977.1| HoxD4 [Heterodontus francisci]
Length = 238
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 90/157 (57%), Gaps = 4/157 (2%)
Query: 181 YLRTNSDKETLNATNFVPKDEAISEMVDGKP-PGFNMDRNGNPVGLRADSNGVGSPDVQD 239
Y R+N ++ N +N V +P P ++ G PV S +G P Q
Sbjct: 49 YPRSNYSGQSYNCSNARGSPVQQRGHVQAQPAPQNHLTGQGEPVAPLQVS--IGRPCSQQ 106
Query: 240 SCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHY 298
+ +Q + A +YPWMK + + TGG KRSR Y+R Q LELEKEFH+
Sbjct: 107 QHNPKNQNGTATKQPAVVYPWMKKIHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHF 166
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 167 NRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 203
>gi|328778440|ref|XP_623903.2| PREDICTED: homeotic protein Sex combs reduced [Apis mellifera]
Length = 380
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G + +Y WMK + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 262 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 321
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 322 AHALCLTERQIKIWFQNRRMKWKKE 346
>gi|383849762|ref|XP_003700506.1| PREDICTED: homeobox protein abdominal-A homolog [Megachile
rotundata]
Length = 293
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 243 VSSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 125 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 184
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 185 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 225
>gi|149705651|ref|XP_001499526.1| PREDICTED: homeobox protein Hox-A6 [Equus caballus]
Length = 233
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSGSVPGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|28629629|gb|AAO43020.1| HoxA7 [Latimeria menadoensis]
Length = 140
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 9/84 (10%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
E+ +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 43 ENNFRIYPWMRS---------SGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 93
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KKE
Sbjct: 94 HALCLTERQIKIWFQNRRMKWKKE 117
>gi|167013293|pdb|2R5Y|A Chain A, Structure Of ScrEXD COMPLEX BOUND TO A CONSENSUS HOX-Exd
Site
gi|167013297|pdb|2R5Z|A Chain A, Structure Of ScrEXD COMPLEX BOUND TO A DNA SEQUENCE
Derived From The Fkh Gene
Length = 88
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 8 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSL 67
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 68 TERQIKIWFQNRRMKWKKE 86
>gi|259053109|emb|CAX11341.1| antennapedia [Parasteatoda tepidariorum]
Length = 195
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 121 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 170
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 171 CLTERQIKIWFQNRRMKWKKE 191
>gi|8650523|gb|AAF78248.1|AF275310_1 Hox5 [Haliotis rufescens]
Length = 281
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ Q +S G KRSR +Y+R+QTLELEKEFHYNKYL+R+RRIEIAH L L
Sbjct: 178 IYPWMRRMQYSSDG--NDGETKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNL 235
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 236 TERQIKIWFQNRRMKWKKE 254
>gi|354479702|ref|XP_003502048.1| PREDICTED: homeobox protein Hox-A6-like [Cricetulus griseus]
gi|344252751|gb|EGW08855.1| Homeobox protein Hox-A6 [Cricetulus griseus]
Length = 233
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS SV + HE G D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKVLHEEGTDRKYTSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|386782|gb|AAA36005.1| homeobox protein, partial [Homo sapiens]
Length = 99
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S +G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 8 IYPWMRS---------SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCL 58
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 59 TERQIKIWFQNRRMKWKKE 77
>gi|87042409|gb|ABD16213.1| abdominal-A [Strigamia maritima]
Length = 289
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM S + G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 130 YPWM------SITGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 183
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 184 ERQIKIWFQNRRMKLKKE 201
>gi|217035829|gb|ACJ74385.1| Hox5 [Branchiostoma lanceolatum]
Length = 287
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 75/118 (63%), Gaps = 11/118 (9%)
Query: 227 ADSNGVGSPDVQDSCSVSSQ---------QDHEGEDGATLYPWMKSNQDASYSCKTGGGN 277
D VGSP+ + + S Q +YPWM+ ++S TG N
Sbjct: 153 VDLESVGSPNATATAAGSVQPSNNNTANNTASTSPSNIPMYPWMRKIH-LNHSAGTGD-N 210
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 211 KRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 268
>gi|344270546|ref|XP_003407105.1| PREDICTED: homeobox protein Hox-A6-like [Loxodonta africana]
Length = 233
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 11/108 (10%)
Query: 239 DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
DS SV + H EG D + +YPWM+ S A Y G +R RQTY+RYQTLE
Sbjct: 114 DSSSVQGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQTYTRYQTLE 169
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
LEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 170 LEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|151935661|gb|ABS18812.1| Hox5, partial [Flaccisagitta enflata]
Length = 335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
AT++PWM+ + G KR+RQTY+R+QTLELEKEFH+N+YL+R+RRIEI H L
Sbjct: 186 ATIFPWMRGT-----TGDLGIDQKRTRQTYTRHQTLELEKEFHFNRYLTRRRRIEIVHAL 240
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 241 GLTERQIKIWFQNRRMKWKKE 261
>gi|380014418|ref|XP_003691229.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Apis florea]
Length = 395
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Query: 243 VSSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
S QQ G+ + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 227 TSCQQPTTGQPSISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 286
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFHYN YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 287 EFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 327
>gi|151935663|gb|ABS18813.1| Hox6 [Flaccisagitta enflata]
Length = 145
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 12/105 (11%)
Query: 232 VGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
G P Q+ + DH +YPWM+S D KR RQTY+RYQTLE
Sbjct: 3 AGHPGPQEGQAAPI--DHSLNSQTPIYPWMRSQFD----------RKRGRQTYTRYQTLE 50
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEK 336
LEKEFH+N+YL+R+RRI+IAH L LTERQIKIWFQNRRMK KKE+
Sbjct: 51 LEKEFHFNRYLTRRRRIDIAHALCLTERQIKIWFQNRRMKWKKEQ 95
>gi|239950180|gb|ACS36775.1| abd-A [Artemia franciscana]
Length = 258
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM S + G +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 112 YPWM------SITGPNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLT 165
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 166 ERQIKIWFQNRRMKLKKE 183
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 8/94 (8%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
SV+SQ D + +YPWM+ +S G KRSR Y+RYQTLELEKEFH+N+Y
Sbjct: 124 SVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQTLELEKEFHFNRY 175
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 176 LTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE 209
>gi|328778463|ref|XP_394120.4| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Apis
mellifera]
Length = 396
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Query: 243 VSSQQDHEGEDGAT---LYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
S QQ G+ + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 227 TSCQQPTTGQPSISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 286
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFHYN YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 287 EFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 327
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 9/107 (8%)
Query: 230 NGV-GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
NG+ G+ S +V+SQ D + +YPWM+ +S G KRSR Y+RYQ
Sbjct: 113 NGMNGTEKNTSSNAVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQ 164
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 165 TLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE 211
>gi|449277037|gb|EMC85344.1| Homeobox protein Hox-B6 [Columba livia]
Length = 213
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 5/93 (5%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+ E + A +YPWM+ SC + KR RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 110 ESEEQKCSAPVYPWMQRMN----SCNSPD-RKRGRQTYTRYQTLELEKEFHFNRYLTRRR 164
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIAH L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 RIEIAHSLCLTERQIKIWFQNRRMKWKKENKLL 197
>gi|351704296|gb|EHB07215.1| Homeobox protein Hox-A6 [Heterocephalus glaber]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS +V + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSTVQGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|410896924|ref|XP_003961949.1| PREDICTED: homeobox protein Hox-D4a-like [Takifugu rubripes]
Length = 274
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 7/132 (5%)
Query: 211 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSN 264
P G D++G P A + V + QQ+ + ++G A +YPWMK
Sbjct: 113 PRGHVHDKSGQPSPFNAQTESGAPVLVAGPRTCGQQQNTKSQNGTQAKQPAVVYPWMKKV 172
Query: 265 QDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 173 HVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 232
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KK+
Sbjct: 233 WFQNRRMKWKKD 244
>gi|220898194|gb|ACL81449.1| HoxB6 [Latimeria menadoensis]
Length = 222
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 125 VYPWMQRMNSCTGS-AFGPNGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 183
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 184 TERQIKIWFQNRRMKWKKENKLL 206
>gi|405976601|gb|EKC41102.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 277
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 61/89 (68%), Gaps = 6/89 (6%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
GE YPWM +R RQTYSRYQTLELEKEF +N YL+RKRRIE+
Sbjct: 167 GEQPTPFYPWM------GIVGPNSAHRRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEV 220
Query: 311 AHELQLTERQIKIWFQNRRMKLKKEKIVM 339
AH L LTERQIKIWFQNRRMKLKKE+ +
Sbjct: 221 AHSLCLTERQIKIWFQNRRMKLKKERQAI 249
>gi|277349090|ref|NP_001162171.1| ultrabithorax [Apis mellifera]
gi|269979254|gb|ACZ56139.1| ultrabithorax [Apis mellifera]
Length = 330
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 14/104 (13%)
Query: 239 DSCSVSSQ-------QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPSNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|259053113|emb|CAX11343.1| abdominal A [Parasteatoda tepidariorum]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM S +++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 109 YPWM-SIAALNFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 167
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 168 ERQIKIWFQNRRMKLKKE 185
>gi|8815563|gb|AAB19469.2| TATAA binding protein [Homo sapiens]
Length = 120
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 231 GVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
GV D + Q+D + E +YPWM+S +G KR RQTY+RYQ
Sbjct: 1 GVCPGDSAKAGGAKEQRDSDFAAESNFRIYPWMRS---------SGTDRKRGRQTYTRYQ 51
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELE EFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK K E
Sbjct: 52 TLELENEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKNE 98
>gi|18858835|ref|NP_571193.1| homeobox protein Hox-B4a [Danio rerio]
gi|60392407|sp|P22574.3|HXB4A_DANRE RecName: Full=Homeobox protein Hox-B4a; Short=Hox-B4; AltName:
Full=Homeobox protein Zf-13
gi|4322072|gb|AAD15945.1| homeobox protein [Danio rerio]
gi|190337053|gb|AAI62840.1| Homeo box B4a [Danio rerio]
gi|190337059|gb|AAI62844.1| Homeo box B4a [Danio rerio]
Length = 246
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 13/106 (12%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQ----DASYSCKTGGGNKRSRQTYSRYQT 289
+P Q++ +VSS++D +YPWMK +YS GG KRSR Y+R Q
Sbjct: 113 TPTSQNTSTVSSRKD------PVVYPWMKKVHVNIVSPNYS---GGEPKRSRTAYTRQQV 163
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 164 LELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 209
>gi|410901643|ref|XP_003964305.1| PREDICTED: homeobox protein Hox-B8a-like [Takifugu rubripes]
Length = 283
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 17/104 (16%)
Query: 241 CSVSSQQDHEGEDG---------ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
C + Q GED L+PWM+ + G +R RQTYSRYQTLE
Sbjct: 112 CKLGGAQGLGGEDAEGTEQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTLE 163
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 164 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|14916595|sp|Q9IA23.1|HXA5_HETFR RecName: Full=Homeobox protein Hox-A5
gi|7271832|gb|AAF44643.1|AF224262_5 HoxA5 [Heterodontus francisci]
Length = 275
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 75/113 (66%), Gaps = 8/113 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNQDASYSCKTGGGNKRSRQ 282
+GVG SP +D SS G+ A +YPWM+ S+ G KR+R
Sbjct: 147 DGVGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMR-KLHISHDSMGGPEGKRART 205
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 258
>gi|348517907|ref|XP_003446474.1| PREDICTED: homeobox protein Hox-B7-like [Oreochromis niloticus]
Length = 233
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMKS +G +R RQTY+R+Q+LELEKEFH+N+YL+RKR+IE+AH L
Sbjct: 144 CIYPWMKS---------SGSDRRRGRQTYTRHQSLELEKEFHFNRYLTRKRQIEVAHALG 194
Query: 316 LTERQIKIWFQNRRMKLKKEKIV 338
LTERQIKIWFQNRRMK KKE IV
Sbjct: 195 LTERQIKIWFQNRRMKWKKENIV 217
>gi|26984638|emb|CAD59115.1| SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio]
Length = 244
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 13/106 (12%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQ----DASYSCKTGGGNKRSRQTYSRYQT 289
+P Q++ +VSS++D +YPWMK +YS GG KRSR Y+R Q
Sbjct: 111 TPTSQNTSTVSSRKD------PVVYPWMKKVHVNIVSPNYS---GGEPKRSRTAYTRQQV 161
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 162 LELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 207
>gi|4388694|emb|CAA30123.1| unnamed protein product [Xenopus laevis]
Length = 102
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 9/84 (10%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
E +YPWM+S G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 4 EANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 54
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KKE
Sbjct: 55 HTLCLTERQIKIWFQNRRMKWKKE 78
>gi|18026212|gb|AAL25807.1| sec-combs reduced protein [Euprymna scolopes]
Length = 100
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ Q YS G +KRSR +Y+R+QTLELEKEFHYNKYL+R+RRIEIAH L L
Sbjct: 3 IYPWMRRMQ---YSQDPDGESKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNL 59
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 60 TERQIKIWFQNRRMKWKKE 78
>gi|4760774|dbj|BAA77406.1| PLOX6-Dj [Dugesia japonica]
Length = 218
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 4/80 (5%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWM ++ ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 98 VVYPWMNPKMNS----ESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALS 153
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 154 LTERQIKIWFQNRRMKWKKD 173
>gi|148227570|ref|NP_001083341.1| homeobox D8 [Xenopus laevis]
gi|38014744|gb|AAH60408.1| MGC68588 protein [Xenopus laevis]
Length = 233
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 75/111 (67%), Gaps = 11/111 (9%)
Query: 228 DSNGVGSPDVQDSC-SVSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTY 284
+S V PD + C SV + +H + + ++PWM++ + G +R RQTY
Sbjct: 97 ESEPVQYPDCKSPCASVGADPEHLHQNSPASHMFPWMRA--------QVAPGRRRGRQTY 148
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 149 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 199
>gi|254029378|gb|ACT53741.1| ultrabithorax isoform I [Parhyale hawaiensis]
Length = 301
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 64/89 (71%), Gaps = 7/89 (7%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
Q +G++ T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 154 QMGQGQNTTTFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 206
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 207 RIEMAHALCLTERQIKIWFQNRRMKLKKE 235
>gi|45384234|ref|NP_990624.1| homeobox protein Hox-B4 [Gallus gallus]
gi|123264|sp|P14840.1|HXB4_CHICK RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-Z; Short=Chox-Z
gi|63505|emb|CAA35614.1| unnamed protein product [Gallus gallus]
Length = 245
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 72/110 (65%), Gaps = 10/110 (9%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGA---TLYPWMK----SNQDASYSCKTGGGNKRSRQTYS 285
G+P SCS +S +YPWMK S + +YS GG KRSR Y+
Sbjct: 102 GTPSPPPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVSTVNPNYS---GGEPKRSRTAYT 158
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 159 RQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 208
>gi|254692762|dbj|BAH23876.2| transcription factor Hox7 [Balanoglossus misakiensis]
Length = 246
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 74/112 (66%), Gaps = 16/112 (14%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQT 283
GL+ N + SPD SV+ Q+ TLYPW+ + KR RQT
Sbjct: 111 GLKDHCNPLASPD-----SVAQVQNP-----TTLYPWVNAAGMPEVP------KKRCRQT 154
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 155 YTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 206
>gi|30314938|gb|AAP30719.1| Hox5 [Diplosoma listerianum]
Length = 164
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
Query: 234 SPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSNQDASYSCKTG--GGNKRSRQTYS 285
S D ++SS Q GE+ +YPWMK ++C+ NKR R +YS
Sbjct: 47 SSPAMDLTALSSSQQQTGEEKEDTEPLTVIYPWMKR----IHNCQGDPLDANKRRRTSYS 102
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRM+ KKE
Sbjct: 103 RYQTLELEKEFHYNRYLTRRRRVEIAHILSLSERQIKIWFQNRRMRWKKE 152
>gi|332242656|ref|XP_003270499.1| PREDICTED: homeobox protein Hox-A6 [Nomascus leucogenys]
Length = 233
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SPD Q DS S + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPDQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|350405522|ref|XP_003487461.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus impatiens]
Length = 317
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 14/104 (13%)
Query: 239 DSCSVSSQ-------QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPTNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|301128875|emb|CBL59339.1| HoxA5 [Scyliorhinus canicula]
Length = 274
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 8/113 (7%)
Query: 230 NGVG-SPDVQDSCSVSS--QQDHEGEDGAT----LYPWMKSNQDASYSCKTGGGNKRSRQ 282
+G+G SP +D SS G+ A +YPWM+ S+ G KR+R
Sbjct: 146 DGIGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMR-KLHISHDSMGGPEGKRART 204
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 205 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 257
>gi|47213840|emb|CAG00644.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 96/185 (51%), Gaps = 34/185 (18%)
Query: 177 NHTDYLRTNSDKETLNATNFVPKDEAISE-MVDGKPPGFNMDRNGNPVGLRADSNGVGS- 234
+TD LR S T A N K S G + G P D N VG+
Sbjct: 31 GYTDPLRHYSSAATYGAANVQEKVYPASYYQQTGAAAIYGRAAGGAPC----DYNPVGTF 86
Query: 235 -PDVQDSCSVSSQ--------QDHE---------------GED---GATLYPWMKSNQDA 267
D + SC+ SS+ Q+H+ G D +YPWM+ +A
Sbjct: 87 YKDAEGSCAFSSRDDQPLFVTQEHQPRKAECSEQSVAMGGGIDDKSSTLIYPWMQ-RMNA 145
Query: 268 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 327
+ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTERQIKIWFQN
Sbjct: 146 CSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQN 205
Query: 328 RRMKL 332
RRMKL
Sbjct: 206 RRMKL 210
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 306 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 352
>gi|332692512|gb|AEE90189.1| Homeobox C6a [Anguilla anguilla]
gi|385654505|gb|AFI62002.1| Hox-C6a [Anguilla japonica]
Length = 233
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 75/116 (64%), Gaps = 11/116 (9%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMK---SNQDASYSCKTGGGNKR 279
VG A S+ + D C SQ E + +YPWM+ S+ Y G +R
Sbjct: 92 VGQSAQSS-LAQEYTSDQCRTGSQ---EQKGSIQIYPWMQRMNSHSGVGY----GSDRRR 143
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|348564432|ref|XP_003468009.1| PREDICTED: homeobox protein Hox-A6-like [Cavia porcellus]
Length = 233
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 80/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS ++ + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSTIQGKALHDEGSDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|348562279|ref|XP_003466938.1| PREDICTED: homeobox protein Hox-B5-like isoform 2 [Cavia porcellus]
Length = 271
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 5/110 (4%)
Query: 229 SNGVGSPDV---QDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYS 285
S+ +GSP + Q +S EG+ ++PWM+ S+ TG KR+R Y+
Sbjct: 147 SSQLGSPSLARAQPEPMATSTAAPEGQ-APQIFPWMR-KLHISHDNMTGPDGKRARTAYT 204
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 254
>gi|123241|sp|P24061.1|HXA7_COTJA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Quox-1
gi|213618|gb|AAA49501.1| homeobox gene [Coturnix coturnix]
Length = 242
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 64/90 (71%), Gaps = 9/90 (10%)
Query: 246 QQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
Q G +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+
Sbjct: 107 QPAQPGRGQFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRR 157
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIE AH L LTERQIKIWFQNRRMK KKE
Sbjct: 158 RRIEYAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|259013356|ref|NP_001158385.1| homeobox 4 [Saccoglossus kowalevskii]
gi|32307801|gb|AAP79297.1| hox4 [Saccoglossus kowalevskii]
Length = 274
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 256 TLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK N + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 160 VMYPWMKRMHVNPGIGAAAPNGAEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAH 219
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 220 ALGLTERQIKIWFQNRRMKWKKD 242
>gi|291461542|dbj|BAI83405.1| antennapedia 2 [Parasteatoda tepidariorum]
Length = 327
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 226 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 275
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQ KIWFQNRRMK KKE
Sbjct: 276 CLTERQTKIWFQNRRMKWKKE 296
>gi|47217000|emb|CAG01628.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 675 IYPWMQRMNACNGTFGSPG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 732
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 733 TERQIKIWFQNRRMKWKKE 751
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
+++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ I
Sbjct: 237 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQGCI 283
>gi|254029380|gb|ACT53742.1| ultrabithorax isoform II [Parhyale hawaiensis]
Length = 293
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 64/89 (71%), Gaps = 7/89 (7%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
Q +G++ T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 146 QMGQGQNTTTFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 198
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 199 RIEMAHALCLTERQIKIWFQNRRMKLKKE 227
>gi|3445430|emb|CAA07499.1| homeobox protein [Cupiennius salei]
Length = 172
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 74 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 123
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 124 CLTERQIKIWFQNRRMKWKKE 144
>gi|74267511|dbj|BAE44254.1| hoxA7a [Oryzias latipes]
gi|83016928|dbj|BAE53460.1| hoxA7a [Oryzias latipes]
Length = 215
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+++ KR RQTYSRYQTLELEKEFH+N+YLSR+RR+EIAH L L
Sbjct: 112 MYPWMQASDP---------NRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRVEIAHALTL 162
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 163 TERQIKIWFQNRRMKWKKD 181
>gi|332692488|gb|AEE90168.1| Homeobox B6a [Anguilla anguilla]
gi|385654479|gb|AFI61980.1| Hox-B6a [Anguilla japonica]
Length = 227
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRVN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|449477637|ref|XP_002188517.2| PREDICTED: homeobox protein Hox-C6-like, partial [Taeniopygia
guttata]
Length = 212
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Query: 249 HEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E + G +YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+
Sbjct: 116 QEQKSGIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQTLELEKEFHFNRYLTRR 171
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 172 RRIEIANALCLTERQIKIWFQNRRMKWKKE 201
>gi|340727736|ref|XP_003402193.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus terrestris]
Length = 330
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 14/104 (13%)
Query: 239 DSCSVSSQ-------QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPTNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|347972374|ref|XP_003436885.1| AGAP004660-PB [Anopheles gambiae str. PEST]
gi|333467595|gb|EGK96613.1| AGAP004660-PB [Anopheles gambiae str. PEST]
Length = 140
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 48 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 97
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 98 CLTERQIKIWFQNRRMKWKKE 118
>gi|213513139|ref|NP_001133052.1| homeobox protein HoxB6ab [Salmo salar]
gi|157816107|gb|ABV82072.1| homeobox protein HoxB6ab [Salmo salar]
gi|158702279|gb|ABW77477.1| homeobox protien HoxB6ab [Salmo salar]
Length = 227
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|86515384|ref|NP_001034518.1| homeobox protein abdominal-A homolog [Tribolium castaneum]
gi|6016229|sp|Q07961.2|ABDA_TRICA RecName: Full=Homeobox protein abdominal-A homolog
gi|2394295|gb|AAB70262.1| abdominal-AII [Tribolium castaneum]
gi|270002801|gb|EEZ99248.1| abdominal-A [Tribolium castaneum]
Length = 343
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 236 DVQDSCSVSSQQDHEGEDGATLYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTL 290
D +SCS + + YPWM S D G +R RQTY+R+QTL
Sbjct: 170 DPLNSCSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTL 229
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 230 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 274
>gi|224813652|gb|ACN65055.1| homeo box B4a [Megalobrama amblycephala]
Length = 246
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 73/103 (70%), Gaps = 7/103 (6%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLEL 292
+P Q++ +V+S++D +YPWMK S +GG KRSR Y+R Q LEL
Sbjct: 113 TPTSQNTSTVTSRKD------PVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLEL 166
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 167 EKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 209
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 8/94 (8%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+V+SQ D + +YPWM+ +S G KRSR Y+RYQTLELEKEFH+N+Y
Sbjct: 124 AVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQTLELEKEFHFNRY 175
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 176 LTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE 209
>gi|2352536|gb|AAB69194.1| LOX20 homeodomain protein [Helobdella triserialis]
Length = 321
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 63/78 (80%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWMK + + G NKR+R +Y+R+QTLELEKEFH+N+YLSR+RRIEIAH L L+
Sbjct: 1 YPWMKRMHLICENGEQGVDNKRTRTSYTRHQTLELEKEFHFNRYLSRRRRIEIAHVLNLS 60
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMK KK+
Sbjct: 61 ERQIKIWFQNRRMKWKKD 78
>gi|220898193|gb|ACL81448.1| HoxB5 [Latimeria menadoensis]
Length = 264
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 85/147 (57%), Gaps = 29/147 (19%)
Query: 194 TNFVPKDE--AISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG 251
TNF DE A SE +G P RN N P Q + +S EG
Sbjct: 125 TNFTELDETSASSETEEGAP------RNSN------------IPRAQTEPTATSTTATEG 166
Query: 252 EDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 308
+ ++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 167 QT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 220
Query: 309 EIAHELQLTERQIKIWFQNRRMKLKKE 335
EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 221 EIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|332024142|gb|EGI64358.1| Homeotic protein ultrabithorax [Acromyrmex echinatior]
Length = 331
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 64/93 (68%), Gaps = 7/93 (7%)
Query: 243 VSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYL 302
V++Q + T YPWM G +R RQTY+RYQTLELEKEFH N YL
Sbjct: 205 VATQLHQQPTSNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLELEKEFHTNHYL 257
Query: 303 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 258 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 290
>gi|327275883|ref|XP_003222701.1| PREDICTED: homeobox protein Hox-B4-like [Anolis carolinensis]
Length = 251
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 234 SPDVQDSCSVSS-QQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQ 288
+P SCS +S Q +YPWMK S+ + +YS GG KRSR Y+R Q
Sbjct: 104 TPSPPPSCSQNSLNQSPSACKEPVVYPWMKKVHVSSVNPNYS---GGEPKRSRTAYTRQQ 160
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 161 VLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 207
>gi|390178469|ref|XP_003736653.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859455|gb|EIM52726.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 360
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Query: 256 TLYPWM----KSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
T YPWM + +D + S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+A
Sbjct: 242 TFYPWMAIAGECPEDPTKS--TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 299
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 300 HALCLTERQIKIWFQNRRMKLKKE 323
>gi|2394296|gb|AAB70263.1| abdominal-A [Tribolium castaneum]
Length = 284
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 236 DVQDSCSVSSQQDHEGEDGATLYPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTL 290
D +SCS + + YPWM S D G +R RQTY+R+QTL
Sbjct: 111 DPLNSCSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTL 170
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 171 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 215
>gi|255742435|gb|ACU32550.1| homeobox protein HoxA5 [Callorhinchus milii]
Length = 281
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 75/113 (66%), Gaps = 8/113 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNQDASYSCKTGGGNKRSRQ 282
+GVG SP +D SS G+ A +YPWM+ S+ G KR+R
Sbjct: 153 DGVGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMR-KLHISHDNMGGPEGKRART 211
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 212 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 264
>gi|255755649|dbj|BAH96550.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 248
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
Query: 237 VQDSCSVSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
++D CS S D + ++ TLYPW+ + KR RQTY+RYQTLELEK
Sbjct: 113 LKDHCSPLSSADSIAQVQNPTTLYPWVNAAGMPEVP------KKRCRQTYTRYQTLELEK 166
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 167 EFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 207
>gi|59808843|gb|AAH90114.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 233
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 10/119 (8%)
Query: 224 GLRADSNGVGSPDVQDSCS-VSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGG 276
G +A +P SCS ++S H G +YPWMK S ++YS G
Sbjct: 85 GEKAHLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWMKKAHISRASSTYS---DGE 141
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+
Sbjct: 142 AKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKD 200
>gi|299473907|gb|ADJ18236.1| Hox7 protein [Gibbula varia]
Length = 247
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDG-----ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
G PDV +++Q + +G + ++PWM+ A + KR+RQTY+RY
Sbjct: 102 GMPDV-----INTQNGYHNMNGMNPQNSAVFPWMRPGTAADVHFE----QKRTRQTYTRY 152
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFH+N+YL+R+RRIE+AH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 QTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKWKKE 200
>gi|172355404|ref|NP_001116487.1| homeobox B4 [Xenopus (Silurana) tropicalis]
gi|171846845|gb|AAI61550.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 10/119 (8%)
Query: 224 GLRADSNGVGSPDVQDSCS-VSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGG 276
G +A +P SCS ++S H G +YPWMK S ++YS G
Sbjct: 86 GEKAHLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWMKKAHISRASSTYS---DGE 142
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+
Sbjct: 143 AKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKD 201
>gi|400180331|gb|AFP73299.1| Hoxa6alpha [Polyodon spathula]
Length = 226
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
++YPWM N + Y G KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA L
Sbjct: 129 GSVYPWMM-NCNGKYCSIYGSHGKRGRQTYTRHQTLELEKEFHFNRYLTRRRRIEIASAL 187
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 188 CLTERQIKIWFQNRRMKWKKE 208
>gi|213512182|ref|NP_001133047.1| homeobox protein HoxB6aa [Salmo salar]
gi|157816087|gb|ABV82062.1| homeobox protein HoxB6aa [Salmo salar]
Length = 227
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|88604716|gb|ABD46729.1| homeobox protein sex comb reduced [Nymphon gracile]
Length = 274
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 169 IYPWMRKVHIGQNGMSNGMETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 229 SERQIKIWFQNRRMKWKKE 247
>gi|348517813|ref|XP_003446427.1| PREDICTED: homeobox protein Hox-B6a-like [Oreochromis niloticus]
Length = 284
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 77/121 (63%), Gaps = 14/121 (11%)
Query: 215 NMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTG 274
+ R VGL A G+ ++D S S +YPWM+ + + +
Sbjct: 150 GVQRKTECVGLSA--KGLFGETMEDKQSAS----------VPIYPWMQRMNACNGTFSSP 197
Query: 275 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 334
G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 198 G--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 255
Query: 335 E 335
E
Sbjct: 256 E 256
>gi|345489354|ref|XP_001603621.2| PREDICTED: homeotic protein ultrabithorax-like [Nasonia
vitripennis]
Length = 345
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 234 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 286
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 287 LTERQIKIWFQNRRMKLKKE 306
>gi|71896757|ref|NP_001026158.1| homeobox protein Hox-A6 [Gallus gallus]
gi|363730223|ref|XP_003640784.1| PREDICTED: homeobox protein Hox-A6-like isoform 1 [Gallus gallus]
gi|60392397|sp|Q5YLH5.1|HXA6_CHICK RecName: Full=Homeobox protein Hox-A6
gi|34732777|gb|AAQ81318.1| HOXA6 [Gallus gallus]
Length = 231
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 74/110 (67%), Gaps = 14/110 (12%)
Query: 229 SNGVGSPDVQDSCSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYS 285
SNGV S V D EG D + +YPWM+ ++ G +R RQTY+
Sbjct: 113 SNGVQSKIVND----------EGTDRKYTSPVYPWMQ-RMNSCAGTVYGAHGRRGRQTYT 161
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 162 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 211
>gi|154183797|gb|ABS70740.1| Hoxb6a [Haplochromis burtoni]
Length = 284
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 77/121 (63%), Gaps = 14/121 (11%)
Query: 215 NMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTG 274
+ R VGL A G+ ++D S S +YPWM+ + + +
Sbjct: 150 GVQRKTECVGLSA--KGLFGETMEDKQSAS----------VPIYPWMQRMNACNGTFSSP 197
Query: 275 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 334
G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 198 G--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 255
Query: 335 E 335
E
Sbjct: 256 E 256
>gi|432871367|ref|XP_004071930.1| PREDICTED: homeobox protein Hox-B6a-like [Oryzias latipes]
gi|74267541|dbj|BAE44269.1| hoxB6a [Oryzias latipes]
gi|83016949|dbj|BAE53476.1| hoxB6a [Oryzias latipes]
Length = 274
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMQRMNACNGT--FGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE +M
Sbjct: 229 TERQIKIWFQNRRMKWKKENKLM 251
>gi|158702267|gb|ABW77466.1| homeobox protein HoxB6aa [Salmo salar]
gi|221220700|gb|ACM09011.1| Homeobox protein Hox-B6a [Salmo salar]
Length = 227
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|121308835|dbj|BAF43724.1| transcription factor Hox5 [Metacrinus rotundus]
Length = 180
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 12/123 (9%)
Query: 224 GLRADSNGVGSPDV-QDSCSVSSQQDHEGEDGAT----------LYPWMKSNQDASYSCK 272
G + GV P V Q + V Q+ G + +YPWM+ +S
Sbjct: 34 GGMTNCQGVTQPRVCQTATEVKGSQNSPGIQQVSPGIQSTHNEHIYPWMR-RVHSSTGLS 92
Query: 273 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 332
+ KRSR Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 93 SIEPAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKW 152
Query: 333 KKE 335
KKE
Sbjct: 153 KKE 155
>gi|3445436|emb|CAA07502.1| homeobox protein [Cupiennius salei]
Length = 245
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM S + G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 123 YPWM------SIAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 176
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 177 ERQIKIWFQNRRMKLKKE 194
>gi|392301345|gb|AFM55058.1| ultrabithorax, partial [Rhagovelia obesa]
Length = 249
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+V+ H+ T YPWM A G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 156 AVAPSPLHQQASQHTFYPWMA---IAGTFVGANGLRRRGRQTYTRYQTLELEKEFHTNHY 212
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 213 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 246
>gi|255742446|gb|ACU32560.1| homeobox protein HoxB6 [Callorhinchus milii]
Length = 230
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 VYPWMQRMNSSGASAFNPNG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 192 TERQIKIWFQNRRMKWKKENKLL 214
>gi|31323433|gb|AAP47018.1| HOX6/7 [Diplosoma listerianum]
Length = 126
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + G +RSRQTYSRYQTLELEKEFHYN+YL+R+RRIEIA+ L L
Sbjct: 1 VYPWMRQH---------GSQRRRSRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCL 51
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK K+E
Sbjct: 52 SERQIKIWFQNRRMKWKRE 70
>gi|410934533|gb|AFV93983.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 100
Score = 114 bits (286), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM++ G +R RQTYSRYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 5 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGL 55
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMKLKKE ++
Sbjct: 56 TERQIKIWFQNRRMKLKKEAAML 78
>gi|119370789|sp|Q1KKY1.1|HXB8A_FUGRU RecName: Full=Homeobox protein Hox-B8a
gi|94482795|gb|ABF22413.1| homeobox protein HoxB8a [Takifugu rubripes]
Length = 282
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 241 CSVSSQQDHEGEDG---------ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
C + Q GED L+PWM+ G +R RQTYSRYQTLE
Sbjct: 112 CKLGGAQGLGGEDAEGTEQSPSPTQLFPWMRPQ---------AAGRRRGRQTYSRYQTLE 162
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 206
>gi|119370799|sp|Q1KKS8.1|HXD4A_FUGRU RecName: Full=Homeobox protein Hox-D4a
gi|94482851|gb|ABF22466.1| homeobox protein HoxD4a [Takifugu rubripes]
Length = 233
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 211 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSN 264
P G D++G P A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 PRGHVHDKSGQPSPFNAQTESGAPVLVAGPRTCGQQQNTKSQNGTQAKQPAVVYPWMKKV 131
Query: 265 QDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 132 HVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 191
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK K+
Sbjct: 192 WFQNRRMKWTKD 203
>gi|123297|sp|P09019.1|HXB5_XENLA RecName: Full=Homeobox protein Hox-B5; AltName: Full=Xhox-1B;
AltName: Full=XlHbox-4
gi|1334652|emb|CAA30125.1| unnamed protein product [Xenopus laevis]
Length = 230
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 16/110 (14%)
Query: 233 GSPD--VQDSCSVSSQQDHEGEDGAT--LYPWMKS---NQDASYSCKTGGGNKRSRQTYS 285
G+P +QD+CS + G DG + ++PWM+ N D + G KR+R Y+
Sbjct: 113 GAPPRALQDNCSPGA----AGTDGQSPQIFPWMRKLHINHDMA-----GPDGKRARTAYT 163
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 164 RYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 213
>gi|391347328|ref|XP_003747916.1| PREDICTED: homeotic protein antennapedia-like [Metaseiulus
occidentalis]
Length = 263
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 10/85 (11%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
+D + LYPWM+S + KR RQTY+R+QTLELEKEF +N+YL+R+RRIEI
Sbjct: 172 SKDCSLLYPWMRSQFE----------RKRGRQTYTRFQTLELEKEFRFNRYLTRRRRIEI 221
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 222 AHALCLTERQIKIWFQNRRMKWKKE 246
>gi|14916596|sp|Q9IA24.1|HXA6_HETFR RecName: Full=Homeobox protein Hox-A6
gi|7271833|gb|AAF44644.1|AF224262_6 HoxA6 [Heterodontus francisci]
Length = 229
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 241 CSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 297
C+ + EG D +YPWM+ ++S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQ-RMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 298 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLL 213
>gi|28629649|gb|AAO43030.1| HoxB5 [Latimeria menadoensis]
Length = 225
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 85/147 (57%), Gaps = 29/147 (19%)
Query: 194 TNFVPKDE--AISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG 251
TNF DE A SE +G P RN N P Q + +S EG
Sbjct: 86 TNFTELDETSASSETEEGAP------RNSN------------IPRAQTEPTATSTTATEG 127
Query: 252 EDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 308
+ ++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 128 QT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 181
Query: 309 EIAHELQLTERQIKIWFQNRRMKLKKE 335
EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 182 EIAHALCLSERQIKIWFQNRRMKWKKD 208
>gi|340727731|ref|XP_003402191.1| PREDICTED: homeobox protein abdominal-A homolog isoform 3 [Bombus
terrestris]
Length = 399
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 12/105 (11%)
Query: 243 VSSQQDHEGEDGAT---LYPWMKSNQDAS---------YSCKTGGGNKRSRQTYSRYQTL 290
S QQ G+ G + YPWM S + G +R RQTY+R+QTL
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGDFRGPNGCPRRRGRQTYTRFQTL 286
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 287 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 331
>gi|301128874|emb|CBL59338.1| HoxA6 [Scyliorhinus canicula]
Length = 229
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 241 CSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 297
C+ + EG D +YPWM+ ++S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQ-RMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 298 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLL 213
>gi|165873667|gb|ABY67958.1| lox4 hox protein [Capitella teleta]
Length = 257
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G YPWM S +R RQTYSRYQTLELEKEF +N YL+RKRRIEIAH
Sbjct: 146 GIPFYPWMGVVXPNSSQ------RRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEIAHA 199
Query: 314 LQLTERQIKIWFQNRRMKLKKEK 336
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 200 LCLTERQIKIWFQNRRMKLKKER 222
>gi|301128886|emb|CBL59349.1| HoxB6 [Scyliorhinus canicula]
Length = 230
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 VYPWMQRMNSSGASAFNPNG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 192 TERQIKIWFQNRRMKWKKENKLL 214
>gi|391339782|ref|XP_003744226.1| PREDICTED: homeotic protein ultrabithorax-like [Metaseiulus
occidentalis]
Length = 178
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 10/90 (11%)
Query: 256 TLYPWMK--------SNQDASYSCKTG--GGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
T YPWM + Q A + G G +R RQTY+RYQTLELEKEFH N YL+R+
Sbjct: 54 TFYPWMAIAGLNSYIARQQAGFPGFLGASGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 113
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 114 RRIEMAHALCLTERQIKIWFQNRRMKLKKE 143
>gi|209867654|gb|ACI90343.1| Hox-5b [Philodina roseola]
Length = 284
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 14/93 (15%)
Query: 257 LYPWMKSNQDAS-------------YSCKTGGG-NKRSRQTYSRYQTLELEKEFHYNKYL 302
+YPWM+ S Y +T G NKR+R +YSRYQTLELEKEFH+N+YL
Sbjct: 148 IYPWMRRIHSHSTTDVFNDHRFFFFYHLETHVGENKRTRTSYSRYQTLELEKEFHFNRYL 207
Query: 303 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 208 SRRRRIEIAHSLALTERQIKIWFQNRRMKWKKD 240
>gi|255742448|gb|ACU32562.1| homeobox protein HoxB8 [Callorhinchus milii]
gi|387915250|gb|AFK11234.1| homeobox protein HoxB8 [Callorhinchus milii]
Length = 236
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ + GG +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 135 LFPWMRP--------QVAGGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 186
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 187 TERQVKIWFQNRRMKWKKE 205
>gi|402863886|ref|XP_003896223.1| PREDICTED: homeobox protein Hox-A6-like, partial [Papio anubis]
Length = 227
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS S + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYSSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|391339412|ref|XP_003744044.1| PREDICTED: uncharacterized protein LOC100902699 [Metaseiulus
occidentalis]
Length = 274
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 128 IYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 187
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 188 SERQIKIWFQNRRMKWKKE 206
>gi|254212176|gb|ACT65751.1| Hoxa6 [Leucoraja erinacea]
Length = 229
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 241 CSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 297
C+ + EG D +YPWM+ ++S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQ-RMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 298 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLL 213
>gi|410911236|ref|XP_003969096.1| PREDICTED: homeobox protein Hox-A4a-like [Takifugu rubripes]
Length = 286
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 225 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNK 278
L A +G CS++S+ G +YPWMK +N A Y+ GG K
Sbjct: 125 LSAAPDGGAGAIASKDCSIASEVYPGVAKGKEPVVYPWMKKVHATNITAGYN---GGVPK 181
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 182 RSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 238
>gi|351713533|gb|EHB16452.1| Homeobox protein Hox-B7 [Heterocephalus glaber]
Length = 210
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 58/68 (85%), Gaps = 2/68 (2%)
Query: 270 SCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 327
S GGG KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 121 SLARGGGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 180
Query: 328 RRMKLKKE 335
RRMK KKE
Sbjct: 181 RRMKWKKE 188
>gi|312125851|gb|ADQ27869.1| fushi tarazu [Forficula auricularia]
Length = 191
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 59/65 (90%)
Query: 272 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 331
KT G+KRSRQTYSRYQTLELEKEFH+NKYL+R+RRIEIA+ L LTERQIKIWFQNRRMK
Sbjct: 24 KTTSGSKRSRQTYSRYQTLELEKEFHFNKYLTRRRRIEIANALHLTERQIKIWFQNRRMK 83
Query: 332 LKKEK 336
KK +
Sbjct: 84 EKKTR 88
>gi|301128901|emb|CBL59363.1| HoxD5 [Scyliorhinus canicula]
Length = 252
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 15/154 (9%)
Query: 187 DKETLNATNFVPKDEAI--SEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVS 244
D +A+ P D AI + ++ D++ +P+ G SP + S
Sbjct: 92 DPAFCSASLINPSDRAIKTGAAITESSHSYSGDQDTSPLN-DGHPKGTNSPKPE-----S 145
Query: 245 SQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
Q D + +YPWMK NQ+ +G KR+R Y+RYQTLELEKEFHYN+Y
Sbjct: 146 EQLDKDPARQLQIYPWMKKMHLNQEG----LSGLEGKRTRTAYTRYQTLELEKEFHYNRY 201
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 202 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 235
>gi|109067080|ref|XP_001092459.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Macaca mulatta]
gi|355560739|gb|EHH17425.1| Homeobox protein Hox-1B [Macaca mulatta]
gi|355747755|gb|EHH52252.1| Homeobox protein Hox-1B [Macaca fascicularis]
Length = 233
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS S + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYSSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|340727729|ref|XP_003402190.1| PREDICTED: homeobox protein abdominal-A homolog isoform 2 [Bombus
terrestris]
Length = 399
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 68/105 (64%), Gaps = 12/105 (11%)
Query: 243 VSSQQDHEGEDGAT---LYPWMKSNQDAS----YSCKT-----GGGNKRSRQTYSRYQTL 290
S QQ G+ G + YPWM S C G +R RQTY+R+QTL
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGEFDGPNGCPRRRGRQTYTRFQTL 286
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 287 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 331
>gi|198415285|ref|XP_002124598.1| PREDICTED: similar to putative homeobox protein Hox6/7 [Ciona
intestinalis]
Length = 148
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 79/131 (60%), Gaps = 28/131 (21%)
Query: 227 ADSNG-VGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQ--DASYSCK----------- 272
D G V S DV D + ++ D +YPWM++++ + C+
Sbjct: 8 VDGGGKVPSIDVIDD------ETNDNSDVVPVYPWMRTHEVNTLQWICRIRCSIYCDIYI 61
Query: 273 --------TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 324
TG +R RQTYSR+QTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKIW
Sbjct: 62 TSFKQPISTGSHRRRGRQTYSRHQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIW 121
Query: 325 FQNRRMKLKKE 335
FQNRRMK KKE
Sbjct: 122 FQNRRMKWKKE 132
>gi|119370773|sp|Q1KL13.1|HXA4A_FUGRU RecName: Full=Homeobox protein Hox-A4a
gi|94482761|gb|ABF22381.1| homeobox protein HoxA4a [Takifugu rubripes]
Length = 255
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 225 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNK 278
L A +G CS++S+ G +YPWMK +N A Y+ GG K
Sbjct: 94 LSAAPDGGAGAIASKDCSIASEVYPGVAKGKEPVVYPWMKKVHATNITAGYN---GGVPK 150
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 151 RSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 207
>gi|224055148|ref|XP_002199292.1| PREDICTED: homeobox protein Hox-D4 [Taeniopygia guttata]
Length = 237
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
Query: 181 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDS 240
Y R+N ++ + +N ++ G+P G +++G + P + +S
Sbjct: 51 YPRSNYSEQPFSCSN--------AQGSAGQPRGHGQEQSGPASHFPGPAEHCPPPPMSNS 102
Query: 241 CSVSSQQDHEGEDG------ATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELE 293
+ S Q + +G A +YPWMK S + GG KRSR Y+R Q LELE
Sbjct: 103 RACSQQPALKPPNGSALKQPAVVYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELE 162
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 163 KEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 204
>gi|166429526|ref|NP_001107632.1| ultrabithorax [Bombyx mori]
gi|164682496|gb|ABY66345.1| homeobox protein [Bombyx mori]
gi|284924982|dbj|BAI67747.1| Ultrabithorax [Bombyx mori]
Length = 254
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 7/99 (7%)
Query: 237 VQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 296
+ S + ++Q H+ T YPWM G +R RQTY+RYQTLELEKEF
Sbjct: 127 LPGSAASAAQPVHQQPTNHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEF 179
Query: 297 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
H N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 180 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 218
>gi|164682494|gb|ABY66344.1| homeobox protein [Bombyx mori]
Length = 254
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 7/99 (7%)
Query: 237 VQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 296
+ S + ++Q H+ T YPWM G +R RQTY+RYQTLELEKEF
Sbjct: 127 LPGSAASAAQPVHQQPTNHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEF 179
Query: 297 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
H N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 180 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 218
>gi|154183857|gb|ABS70795.1| Hoxd4a [Haplochromis burtoni]
Length = 235
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +R +P A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHGHERASHPSHFSAQTEQGTPVQVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 131
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 192 IWFQNRRMKWKKD 204
>gi|6166223|sp|O57374.2|HXD4A_DANRE RecName: Full=Homeobox protein Hox-D4a; Short=Hox-D4
gi|27362953|gb|AAN86981.1| homeodomain protein Hoxd4A [Danio rerio]
Length = 236
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 10/143 (6%)
Query: 203 ISEMVDG---KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG----- 254
I V G +P G D+ P A + + + S + QQ+ + ++G
Sbjct: 62 ICSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTCGQQQNTKTQNGIPTKQ 121
Query: 255 -ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
A +YPWMK + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIE AH
Sbjct: 122 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAH 181
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 182 TLSLSERQIKIWFQNRRMKWKKD 204
>gi|321475840|gb|EFX86802.1| putative homeotic Ultrabithorax protein [Daphnia pulex]
Length = 380
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 272 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 324
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 325 LTERQIKIWFQNRRMKLKKE 344
>gi|255742444|gb|ACU32558.1| homeobox protein HoxB4 [Callorhinchus milii]
Length = 243
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 234 SPDVQDSCS-VSSQQDHEGEDGATLYPWMKSNQD--ASYSCKTGGGNKRSRQTYSRYQTL 290
+P SCS V+S Q+ +YPWMK + +CK GG KRSR Y+R Q L
Sbjct: 101 TPSPPPSCSQVTSNQNTSCSKEPVVYPWMKKVHINIVNPNCK-GGEMKRSRTAYTRQQVL 159
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH+N+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 160 ELEKEFHFNRYLTRRRRVEIAHNLCLSERQIKIWFQNRRMKWKKD 204
>gi|109944916|dbj|BAE96984.1| Ultrabithorax [Daphnia magna]
gi|109944919|dbj|BAE96986.1| Ultrabithorax [Daphnia magna]
gi|109944927|dbj|BAE96990.1| Ultrabithorax [Daphnia magna]
gi|109944930|dbj|BAE96992.1| Ultrabithorax [Daphnia magna]
Length = 369
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 262 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 314
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 315 LTERQIKIWFQNRRMKLKKE 334
>gi|213510826|ref|NP_001133040.1| homeobox protein HoxA5ab [Salmo salar]
gi|157816063|gb|ABV82050.1| homeobox protein HoxA5ab [Salmo salar]
gi|158702242|gb|ABW77452.1| homeobox protein HoxA5ab [Salmo salar]
Length = 285
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Query: 253 DGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
DGA +YPWM+ S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 183 DGAQPQIYPWMR-KLHISHDSLTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 241
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 AHALCLSERQIKIWFQNRRMKWKKD 266
>gi|58382031|ref|XP_311623.2| AGAP004661-PA [Anopheles gambiae str. PEST]
gi|55242655|gb|EAA45000.2| AGAP004661-PA [Anopheles gambiae str. PEST]
Length = 327
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 79/148 (53%), Gaps = 20/148 (13%)
Query: 208 DGKPPGFNMDRNGNPV---GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGA-------TL 257
D + G+ G+PV G A + GV + CS++ + T
Sbjct: 147 DSRVGGYIDASGGSPVSRAGSAAAATGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206
Query: 258 YPWMKSNQDASYSCKTG----------GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
YPWM G G +R RQTY+RYQTLELEKEFH N YL+R+RR
Sbjct: 207 YPWMAIAGKRYSESLAGTLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRR 266
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 267 IEMAHALCLTERQIKIWFQNRRMKLKKE 294
>gi|87042406|gb|ABD16212.1| ultrabithorax [Strigamia maritima]
Length = 267
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 152 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 204
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 205 LTERQIKIWFQNRRMKLKKE 224
>gi|259013344|ref|NP_001158380.1| homeobox 7 [Saccoglossus kowalevskii]
gi|116294310|gb|AAP79287.2| hox 7 [Saccoglossus kowalevskii]
Length = 263
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 12/105 (11%)
Query: 237 VQDSCSVSSQQDH------EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
++D CS S D ++ TLYPW+ + KR RQTY+RYQTL
Sbjct: 112 LKDHCSQISSADSINNVMSAMQNPTTLYPWVNATGAPEVP------KKRCRQTYTRYQTL 165
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 166 ELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 210
>gi|154183829|gb|ABS70769.1| Hoxa4a [Haplochromis burtoni]
Length = 247
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 9/118 (7%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGN 277
G R + G + CS++++ G +YPWMK S+ +ASY+ GG
Sbjct: 91 GPRLTAAPDGGANASKDCSLATEVYPGVAKGKEPVVYPWMKKVHVSSVNASYN---GGVP 147
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 205
>gi|328710879|ref|XP_001944459.2| PREDICTED: homeotic protein ultrabithorax-like [Acyrthosiphon
pisum]
Length = 339
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 236 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 288
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 289 LTERQIKIWFQNRRMKLKKE 308
>gi|13489077|ref|NP_076919.1| homeobox protein Hox-A6 [Homo sapiens]
gi|332864943|ref|XP_003318413.1| PREDICTED: homeobox protein Hox-A6 [Pan troglodytes]
gi|397472865|ref|XP_003807954.1| PREDICTED: homeobox protein Hox-A6 [Pan paniscus]
gi|17378385|sp|P31267.2|HXA6_HUMAN RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1B
gi|47479571|gb|AAH69497.1| Homeobox A6 [Homo sapiens]
gi|51094978|gb|EAL24222.1| homeo box A6 [Homo sapiens]
gi|85397002|gb|AAI04916.1| Homeobox A6 [Homo sapiens]
gi|85397005|gb|AAI04918.1| Homeobox A6 [Homo sapiens]
gi|119614281|gb|EAW93875.1| homeobox A6, isoform CRA_b [Homo sapiens]
gi|306921739|dbj|BAJ17949.1| homeobox A6 [synthetic construct]
gi|312152714|gb|ADQ32869.1| homeobox A6 [synthetic construct]
Length = 233
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS S + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|224041|prf||1008211B fushi tarazu gene
Length = 435
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + DH +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 236 SPGEKSSSAVSQEIDHRIVTAPNGAGDFNWSHIEETLASRCK---DSKRTRQTYTRYQTL 292
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 293 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 340
>gi|219870099|gb|ACL50280.1| homeobox protein Hoxb-4 [Xenopus laevis]
Length = 230
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Query: 240 SCSV-SSQQDH--EGEDGATLYPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKE 295
SCS+ SS+ H E +YPWMK ++ + S + G KRSR Y+R Q LELEKE
Sbjct: 98 SCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKE 157
Query: 296 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
FHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+
Sbjct: 158 FHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKD 197
>gi|328710877|ref|XP_001944629.2| PREDICTED: homeobox protein abdominal-A homolog [Acyrthosiphon
pisum]
Length = 369
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 258 YPWMK-----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
YPWM S D G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH
Sbjct: 203 YPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 262
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMKLKKE
Sbjct: 263 ALCLTERQIKIWFQNRRMKLKKE 285
>gi|410901645|ref|XP_003964306.1| PREDICTED: homeobox protein Hox-B6a-like [Takifugu rubripes]
gi|119370787|sp|Q1KKY0.1|HXB6A_FUGRU RecName: Full=Homeobox protein Hox-B6a
gi|94482796|gb|ABF22414.1| homeobox protein HoxB6a [Takifugu rubripes]
Length = 274
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMQRMNACNGT--FGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 229 TERQIKIWFQNRRMKWKKE 247
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 73/110 (66%), Gaps = 12/110 (10%)
Query: 236 DVQDSCSVSSQQDH------EGEDGAT----LYPWMKSNQDASYSCKTGGGNKRSRQTYS 285
D DS SS D EG G+ +YPWMK + + NKR+R +Y+
Sbjct: 156 DAVDSPGGSSHSDEPQSPTDEGAAGSPNQPHIYPWMKRMHIGHDT--SNADNKRTRTSYT 213
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 214 RHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKE 263
>gi|426355742|ref|XP_004045267.1| PREDICTED: homeobox protein Hox-A6 [Gorilla gorilla gorilla]
Length = 233
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS S + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|123204519|gb|ABM73573.1| homeodomain protein [Megalobrama amblycephala]
Length = 201
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 75/117 (64%), Gaps = 19/117 (16%)
Query: 236 DVQDSCS-------VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNK 278
DV SC S QD+ + G T +YPWM+ + S+ G +
Sbjct: 82 DVLPSCRQSLGQTRGSLTQDYASDQGKTASQEPKGSIQIYPWMQ--RMNSHRVGYGSDRR 139
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R RQTYSRYQTLELEKEFHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 140 RGRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKKE 196
>gi|2209200|gb|AAB61442.1| LOX5 [Helobdella robusta]
Length = 374
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 4/79 (5%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S + G KR+RQTY+RYQTLELEKEF+ N+YL+R+RRIEIAH L L
Sbjct: 247 IYPWMRSFVGPDF----GFDQKRTRQTYTRYQTLELEKEFYSNRYLTRRRRIEIAHSLAL 302
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 303 SERQIKIWFQNRRMKWKKE 321
>gi|387598536|gb|AFJ91924.1| homeodomain transcription factor 4 [Platynereis dumerilii]
Length = 273
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYN 299
S SQ + + +YPWMK S G NKR+R Y+R+Q LELEKEFH+N
Sbjct: 128 SQCSQPNSTPTNPPVIYPWMKRIHVGSQGANGAYGADNKRTRTAYTRHQVLELEKEFHFN 187
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+YL+R+RRIEIAH L LT+RQIKIWFQNRRMK KKE
Sbjct: 188 RYLTRRRRIEIAHALCLTKRQIKIWFQNRRMKWKKE 223
>gi|255742434|gb|ACU32549.1| homeobox protein HoxA6 [Callorhinchus milii]
Length = 229
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++S S G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 132 IYPWMQ-RMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCL 190
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 191 TERQIKIWFQNRRMKWKKENKLL 213
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 114 bits (284), Expect = 9e-23, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 1249 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 1308
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 1309 LCLSERQIKIWFQNRRMKWKKD 1330
Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 11/107 (10%)
Query: 232 VGSPDVQDSC-SVSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
V PD + S ++ DH + + ++PWM+ + G +R RQTYSR+Q
Sbjct: 498 VQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQ 549
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 550 TLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 596
Score = 98.2 bits (243), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/136 (40%), Positives = 73/136 (53%), Gaps = 29/136 (21%)
Query: 221 NPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASY---SCKT---- 273
NP G G P+ S + S+Q ++PWMK ++ S SC+
Sbjct: 2058 NPGGGVPAKKPKGGPNASSSSATISKQ---------IFPWMKESRQNSKQKNSCRPPSLP 2108
Query: 274 -------------GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 320
G +KR R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L LTERQ
Sbjct: 2109 PCPGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 2168
Query: 321 IKIWFQNRRMKLKKEK 336
IKIWFQNRRMK KK++
Sbjct: 2169 IKIWFQNRRMKYKKDQ 2184
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 256 TLYPWMKSNQDASYSCKT---GGGNKRS--RQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
+ + WMK ++AS K G N S R +S Q ELEKEFH+NKYL+R RRIEI
Sbjct: 2904 STFEWMKVKRNASKKSKLAQYGTANPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEI 2963
Query: 311 AHELQLTERQIKIWFQNRRMKLKKEK 336
A+ LQL + Q+KIWFQNRRMK KK +
Sbjct: 2964 ANCLQLNDTQVKIWFQNRRMKQKKRE 2989
>gi|403287993|ref|XP_003935202.1| PREDICTED: homeobox protein Hox-A6 [Saimiri boliviensis
boliviensis]
gi|170649679|gb|ACB21264.1| homeobox A6 (predicted) [Callicebus moloch]
Length = 233
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS S + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|296209381|ref|XP_002751499.1| PREDICTED: homeobox protein Hox-A6 [Callithrix jacchus]
Length = 233
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS S + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGTDRKYTSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|148225917|ref|NP_001089733.1| homeobox protein Hox-B4 [Xenopus laevis]
gi|123238|sp|P09070.1|HXB4_XENLA RecName: Full=Homeobox protein Hox-B4; AltName: Full=Xhox-1A
gi|214265|gb|AAA49756.1| homeobox protein 1A [Xenopus laevis]
gi|76780348|gb|AAI06430.1| MGC131119 protein [Xenopus laevis]
Length = 232
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Query: 240 SCSV-SSQQDH--EGEDGATLYPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKE 295
SCS+ SS+ H E +YPWMK ++ + S + G KRSR Y+R Q LELEKE
Sbjct: 100 SCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKE 159
Query: 296 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
FHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+
Sbjct: 160 FHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKD 199
>gi|410952546|ref|XP_003982940.1| PREDICTED: homeobox protein Hox-A7 [Felis catus]
Length = 218
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 13/123 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 76 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 130
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 131 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 186
Query: 329 RMK 331
RMK
Sbjct: 187 RMK 189
>gi|322799475|gb|EFZ20783.1| hypothetical protein SINV_00833 [Solenopsis invicta]
Length = 522
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
T+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 282 TIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 341
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 342 TLVLSERQIKIWFQNRRMKWKKD 364
>gi|297262540|ref|XP_001108363.2| PREDICTED: hypothetical protein LOC704526 isoform 3 [Macaca
mulatta]
Length = 948
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQT 289
S QD E G T +YPWM+ S+ Y G +R RQ YSRYQT
Sbjct: 811 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQT 866
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 867 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 912
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 276 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 182 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 241
>gi|259053107|emb|CAX11340.1| ultrabithorax [Parasteatoda tepidariorum]
Length = 265
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 138 TFYPWMAVQGP-------NGMRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLC 190
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 191 LTERQIKIWFQNRRMKLKKE 210
>gi|2661827|emb|CAA74883.1| Hoxd4 protein [Danio rerio]
Length = 256
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 10/143 (6%)
Query: 203 ISEMVDG---KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG----- 254
I V G +P G D+ P A + + + S + QQ+ + ++G
Sbjct: 82 ICSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTCGQQQNTKTQNGIPTKQ 141
Query: 255 -ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
A +YPWMK + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIE AH
Sbjct: 142 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAH 201
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 202 TLSLSERQIKIWFQNRRMKWKKD 224
>gi|327263834|ref|XP_003216722.1| PREDICTED: homeobox protein Hox-C4-like [Anolis carolinensis]
Length = 283
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 10/95 (10%)
Query: 248 DHEGEDGA---TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
DH + +YPWMK S + +Y TGG KRSR Y+R Q LELEKEFHYN+
Sbjct: 144 DHPSSTASKQPIVYPWMKKIHVSTVNPNY---TGGEPKRSRTAYTRQQVLELEKEFHYNR 200
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 201 YLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 235
>gi|332024158|gb|EGI64374.1| Homeotic protein deformed [Acromyrmex echinatior]
Length = 522
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
T+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 281 TIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 340
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 341 TLVLSERQIKIWFQNRRMKWKKD 363
>gi|311275742|ref|XP_003134887.1| PREDICTED: homeobox protein Hox-A6-like [Sus scrofa]
Length = 233
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS S + H EG D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQFKPDSSSGPGKGLHDEGTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|225707008|gb|ACO09350.1| Homeobox protein Hox-B6a [Osmerus mordax]
Length = 226
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ +C GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----ACNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|363730022|ref|XP_003640747.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730036|ref|XP_003640753.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730108|ref|XP_003640770.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|60392398|sp|Q6B3N0.1|HXA5_CHICK RecName: Full=Homeobox protein Hox-A5
gi|50956652|gb|AAT90845.1| homeodomain transcription factor [Gallus gallus]
Length = 270
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSR 281
+GVG S ++ SS+Q D +T +YPWM+ S+ G KR+R
Sbjct: 141 DGVGTSSGTEEDTPASSEQASAPSDQSTAQPSQPQIYPWMR-KLHISHDNIGGPEGKRAR 199
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|383849603|ref|XP_003700434.1| PREDICTED: homeotic protein ultrabithorax-like [Megachile
rotundata]
Length = 329
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 15/105 (14%)
Query: 239 DSCSVSSQ-------QDHEGEDGA-TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
++CS++S Q H+ G+ T YPWM G +R RQTY+RYQTL
Sbjct: 191 NTCSLNSSASQPVATQLHQQPTGSHTFYPWMAI-------AGANGMRRRGRQTYTRYQTL 243
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFH + YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 244 ELEKEFHTSHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 288
>gi|297680782|ref|XP_002818147.1| PREDICTED: homeobox protein Hox-A6 [Pongo abelii]
Length = 233
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSR 286
SP+ Q DS S + H EG D + +YPWM+ ++ G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQ-RMNSCAGTVYGSHGRRGRQTYTR 164
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|496849|emb|CAA83978.1| DNA-binding protein [Girardia tigrina]
Length = 203
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 4/80 (5%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPW+ ++ ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 105 VVYPWLNPKMNS----ESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHGLS 160
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 161 LTERQIKIWFQNRRMKWKKD 180
>gi|14916584|sp|Q9IA11.1|HXD5_HETFR RecName: Full=Homeobox protein Hox-D5
gi|7271819|gb|AAF44631.1|AF224263_1 HoxD5 [Heterodontus francisci]
Length = 252
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWMK NQ+ +G KR+R Y+RYQTLELEKEFHYN+YL+R+RRIEIAH
Sbjct: 158 IYPWMKKMHLNQEG----LSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 213
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 214 LCLTERQIKIWFQNRRMKWKKD 235
>gi|400180338|gb|AFP73305.1| Hoxa6beta [Polyodon spathula]
Length = 229
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
++YPWM ++ + S G KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L
Sbjct: 132 GSVYPWMMNSCNGS---NYGSHGKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANAL 188
Query: 315 QLTERQIKIWFQNRRMKLKKEKIVM 339
LTERQIKIWFQNRRMK KKE ++
Sbjct: 189 CLTERQIKIWFQNRRMKWKKENKLI 213
>gi|969089|gb|AAA84409.1| UBXIIA [Drosophila melanogaster]
Length = 363
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 22/137 (16%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNQDASY 269
NGN G+++ G+ ++ C++S H+ + T YPWM + Y
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWM-AIAGKRY 250
Query: 270 S-----------CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 319 RQIKIWFQNRRMKLKKE 335
RQIKIWFQNRRMKLKKE
Sbjct: 311 RQIKIWFQNRRMKLKKE 327
>gi|187608357|ref|NP_001119917.1| homeobox protein Hox-D4a [Danio rerio]
gi|190337184|gb|AAI62966.1| Homeo box D4a [Danio rerio]
gi|190338908|gb|AAI62983.1| Homeo box D4a [Danio rerio]
gi|190339776|gb|AAI63059.1| Hoxd4a protein [Danio rerio]
Length = 256
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G D+ P A + + + S + QQ+ + ++G A +YPWMK
Sbjct: 92 QPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKK 151
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 152 VHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 211
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 212 IWFQNRRMKWKKD 224
>gi|449268332|gb|EMC79201.1| Homeobox protein Hox-A5 [Columba livia]
Length = 270
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSR 281
+GVG S ++ SS+Q D +T +YPWM+ S+ G KR+R
Sbjct: 141 DGVGTSSGTEEDTPASSEQASAPTDQSTAQPSQPQIYPWMR-KLHISHDNIGGPEGKRAR 199
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|24647521|ref|NP_732171.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|23171493|gb|AAN13717.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|300684546|gb|ADK27789.1| LD09363p [Drosophila melanogaster]
Length = 363
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 22/137 (16%)
Query: 219 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNQDASY 269
NGN G+++ G+ ++ C++S H+ + T YPWM + Y
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWM-AIAGKRY 250
Query: 270 S-----------CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 319 RQIKIWFQNRRMKLKKE 335
RQIKIWFQNRRMKLKKE
Sbjct: 311 RQIKIWFQNRRMKLKKE 327
>gi|363730024|ref|XP_003640748.1| PREDICTED: homeobox protein Hox-A6-like [Gallus gallus]
gi|363730225|ref|XP_003640785.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Gallus gallus]
Length = 214
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 74/110 (67%), Gaps = 14/110 (12%)
Query: 229 SNGVGSPDVQDSCSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYS 285
SNGV S V D EG D + +YPWM+ ++ G +R RQTY+
Sbjct: 96 SNGVQSKIVND----------EGTDRKYTSPVYPWMQ-RMNSCAGTVYGAHGRRGRQTYT 144
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 145 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 194
>gi|19070094|emb|CAD24794.1| HOM-C transcription factor [Oscheius tipulae]
Length = 192
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 253 DGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
GA +YPWM S + G KR R Y+R Q LELEKEFH+NKYL+RKRR+EIAH
Sbjct: 78 SGAAVYPWMTRVHSNSTGPR---GEKRQRTAYTRVQVLELEKEFHFNKYLTRKRRLEIAH 134
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KKE
Sbjct: 135 ALTLTERQVKIWFQNRRMKHKKE 157
>gi|391329251|ref|XP_003739089.1| PREDICTED: uncharacterized protein LOC100908539 [Metaseiulus
occidentalis]
Length = 1486
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 274 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 333
G +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLK
Sbjct: 1276 GCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 1335
Query: 334 KE 335
KE
Sbjct: 1336 KE 1337
>gi|4929545|gb|AAD34033.1|AF151696_1 MAB-5 [Pristionchus pacificus]
Length = 197
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK S GG +KR+RQTYSR QTLELEKEFH+NKYL+RKRR EI+ L L
Sbjct: 108 VFPWMK------MSAAKGGVSKRTRQTYSRTQTLELEKEFHFNKYLTRKRRQEISESLHL 161
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 162 TERQVKIWFQNRRMKHKKE 180
>gi|5441267|dbj|BAA82361.1| Hoxd-4 [Paralichthys olivaceus]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +R+G+ A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHVQERSGHASPFDAQTEQGAPVPVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 131
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 192 IWFQNRRMKWKKD 204
>gi|395835047|ref|XP_003790496.1| PREDICTED: homeobox protein Hox-C6 [Otolemur garnettii]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 252 EDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+DG +YPWM+ +S + G KRSR Y+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 130 QDG--VYPWMRRMHMSSGT--NGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIA 185
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KKE
Sbjct: 186 HALGLSERQIKIWFQNRRMKWKKE 209
>gi|306965452|emb|CBK55567.1| ultrabithorax [Glomeris marginata]
Length = 335
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 229 TFYPWMAIA-------GANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 281
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 282 LTERQIKIWFQNRRMKLKKE 301
>gi|123319|sp|P09080.3|HMB1_TRIGR RecName: Full=Homeobox protein HB1; AltName: Full=TGHBOX1
gi|829232|emb|CAA32660.1| TgHbox1 protein [Tripneustes gratilla]
Length = 307
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM A + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L LT
Sbjct: 173 YPWMPV---AGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLT 229
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMK KKE
Sbjct: 230 ERQIKIWFQNRRMKYKKE 247
>gi|344266085|ref|XP_003405111.1| PREDICTED: homeobox protein Hox-C6-like [Loxodonta africana]
gi|444513899|gb|ELV10484.1| Homeobox protein Hox-C6 [Tupaia chinensis]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|348517815|ref|XP_003446428.1| PREDICTED: homeobox protein Hox-B8a-like [Oreochromis niloticus]
Length = 280
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 16/105 (15%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
G+GS D + + + L+PWM+ + G +R RQTYSRYQTL
Sbjct: 119 GLGSEDAEGT--------EQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTL 162
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 ELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|47551093|ref|NP_999725.1| homeobox protein HB1 [Strongylocentrotus purpuratus]
gi|2506527|sp|P13545.2|HMB1_STRPU RecName: Full=Homeobox protein HB1; AltName: Full=SPHBOX1
gi|1339973|dbj|BAA12813.1| homeobox [Strongylocentrotus purpuratus]
Length = 308
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 258 YPWMK-SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM S + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L L
Sbjct: 174 YPWMPVSGPNVGLEV----GRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGL 229
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 230 TERQIKIWFQNRRMKYKKE 248
>gi|297466157|ref|XP_869789.3| PREDICTED: homeobox protein Hox-C6 isoform 1 [Bos taurus]
gi|297474426|ref|XP_002687279.1| PREDICTED: homeobox protein Hox-C6 [Bos taurus]
gi|335287898|ref|XP_003355472.1| PREDICTED: homeobox protein Hox-C6-like [Sus scrofa]
gi|338726314|ref|XP_003365298.1| PREDICTED: homeobox protein Hox-C6-like isoform 1 [Equus caballus]
gi|345792344|ref|XP_003433616.1| PREDICTED: homeobox protein Hox-C6 [Canis lupus familiaris]
gi|348581051|ref|XP_003476291.1| PREDICTED: homeobox protein Hox-C6-like [Cavia porcellus]
gi|410964585|ref|XP_003988834.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Felis catus]
gi|281342177|gb|EFB17761.1| hypothetical protein PANDA_012614 [Ailuropoda melanoleuca]
gi|296487930|tpg|DAA30043.1| TPA: homeobox C6 [Bos taurus]
gi|351706134|gb|EHB09053.1| Homeobox protein Hox-C6 [Heterocephalus glaber]
gi|431921605|gb|ELK18957.1| Homeobox protein Hox-C6 [Pteropus alecto]
gi|432112558|gb|ELK35274.1| Homeobox protein Hox-C6 [Myotis davidii]
gi|440900713|gb|ELR51791.1| Homeobox protein Hox-C6 [Bos grunniens mutus]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|154183796|gb|ABS70739.1| Hoxb8a [Haplochromis burtoni]
Length = 280
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 16/105 (15%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
G+GS D + + + L+PWM+ + G +R RQTYSRYQTL
Sbjct: 119 GLGSEDAEGT--------EQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTL 162
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 ELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|51476|emb|CAA34518.1| unnamed protein product [Mus musculus]
gi|241279|gb|AAB20717.1| homeobox protein 3.3 [Mus sp.]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|348522887|ref|XP_003448955.1| PREDICTED: homeobox protein Hox-A4 [Oreochromis niloticus]
Length = 305
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 9/118 (7%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGN 277
G R + G + CS++++ G +YPWMK S+ +ASY+ GG
Sbjct: 149 GPRLAAAPDGGANASKDCSLATEVYPGVAKGKEPVVYPWMKKVHVSSVNASYN---GGVP 205
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 206 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 263
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 13/105 (12%)
Query: 235 PDVQDSCSVSSQQDHE----GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
PD + S S + +D E G + ++PWM+ + G +R RQTYSR+QTL
Sbjct: 412 PDCKSS-SANLGEDPELLNHGASPSPMFPWMRP--------QAAPGRRRGRQTYSRFQTL 462
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 463 ELEKEFLFNPYLTRKRRIEVSHGLGLTERQVKIWFQNRRMKWKKE 507
>gi|4758554|ref|NP_004494.1| homeobox protein Hox-C6 isoform 1 [Homo sapiens]
gi|114145519|ref|NP_034595.2| homeobox protein Hox-C6 [Mus musculus]
gi|332839194|ref|XP_003313691.1| PREDICTED: homeobox protein Hox-C6 [Pan troglodytes]
gi|390467697|ref|XP_002752511.2| PREDICTED: homeobox protein Hox-C6-like [Callithrix jacchus]
gi|392341720|ref|XP_001069410.2| PREDICTED: homeobox protein Hox-C6 isoform 1 [Rattus norvegicus]
gi|392349763|ref|XP_003750463.1| PREDICTED: homeobox protein Hox-C6 [Rattus norvegicus]
gi|395744376|ref|XP_002823404.2| PREDICTED: homeobox protein Hox-C6 [Pongo abelii]
gi|397521943|ref|XP_003831042.1| PREDICTED: homeobox protein Hox-C6 [Pan paniscus]
gi|402886201|ref|XP_003906526.1| PREDICTED: homeobox protein Hox-C6 [Papio anubis]
gi|403296835|ref|XP_003939300.1| PREDICTED: homeobox protein Hox-C6 [Saimiri boliviensis
boliviensis]
gi|426372802|ref|XP_004053305.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Gorilla gorilla
gorilla]
gi|400007|sp|P10629.2|HXC6_MOUSE RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein Hox-3.3; AltName: Full=Homeobox protein Hox-6.1
gi|115502398|sp|P09630.3|HXC6_HUMAN RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein CP25; AltName: Full=Homeobox protein HHO.C8;
AltName: Full=Homeobox protein Hox-3C
gi|7446275|pir||S72429 homeotic protein HOX C6 (clone 211) - human
gi|1836128|gb|AAB46892.1| homeodomain-containing protein [Homo sapiens]
gi|49901568|gb|AAH74845.1| Homeobox C6 [Homo sapiens]
gi|49902099|gb|AAH74844.1| Homeobox C6 [Homo sapiens]
gi|119617153|gb|EAW96747.1| homeobox C6, isoform CRA_b [Homo sapiens]
gi|148671996|gb|EDL03943.1| homeobox C6 [Mus musculus]
gi|149031890|gb|EDL86802.1| homeo box C6 [Rattus norvegicus]
gi|187954707|gb|AAI41062.1| Homeo box C6 [Mus musculus]
gi|306921741|dbj|BAJ17950.1| homeobox C6 [synthetic construct]
gi|355564296|gb|EHH20796.1| Homeobox protein Hox-3C [Macaca mulatta]
gi|355786154|gb|EHH66337.1| Homeobox protein Hox-3C [Macaca fascicularis]
gi|410226590|gb|JAA10514.1| homeobox C6 [Pan troglodytes]
gi|410255858|gb|JAA15896.1| homeobox C6 [Pan troglodytes]
gi|410348018|gb|JAA40758.1| homeobox C6 [Pan troglodytes]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 256 TLYPWMKSNQ--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWMK + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 164 VMYPWMKRAHIHPGVGAAQNGAEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHA 223
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KK+
Sbjct: 224 LGLTERQVKIWFQNRRMKWKKD 245
>gi|27544943|ref|NP_034584.1| homeobox protein Hox-A6 [Mus musculus]
gi|20141492|sp|P09092.2|HXA6_MOUSE RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1.2; AltName: Full=Homeobox protein M5-4
gi|9716486|gb|AAF97512.1|AF247663_1 homeodomain protein Hoxa 6 [Mus musculus]
gi|111599973|gb|AAI19106.1| Homeo box A6 [Mus musculus]
gi|111601101|gb|AAI19108.1| Homeo box A6 [Mus musculus]
gi|148666243|gb|EDK98659.1| homeobox A6 [Mus musculus]
Length = 232
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 5/102 (4%)
Query: 242 SVSSQQDHE-GED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 297
SV + HE G D + +YPWM+ ++ G +R RQTY+RYQTLELEKEFH
Sbjct: 116 SVQGKALHEEGTDRKYTSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFH 174
Query: 298 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 175 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 216
>gi|301128902|emb|CBL59364.1| HoxD4 [Scyliorhinus canicula]
Length = 240
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 220 GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK-TGGGNK 278
G PV S +G P Q + +Q + A +YPWMK + + TGG K
Sbjct: 91 GEPVAPLQVS--IGRPCSQQQHNPKNQNGTATKQPAVVYPWMKKVHVNTVNPNYTGGEPK 148
Query: 279 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 149 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 205
>gi|74267507|dbj|BAE44252.1| hoxA4a [Oryzias latipes]
gi|83016930|dbj|BAE53462.1| hoxA4a [Oryzias latipes]
Length = 249
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%), Gaps = 10/115 (8%)
Query: 227 ADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRS 280
A +G G+ +D CS+ S+ G +YPWMK S +ASY+ GG KRS
Sbjct: 97 APDSGAGTNASKD-CSLGSEVYPGVAKGKEPVVYPWMKKVHVSTVNASYN---GGVPKRS 152
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 207
>gi|395540362|ref|XP_003772124.1| PREDICTED: homeobox protein Hox-A5 [Sarcophilus harrisii]
Length = 269
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+Q +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 152 TPASSEQASAQSEQSPAQPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 210
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 211 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|74267563|dbj|BAE44280.1| hoxC6a [Oryzias latipes]
gi|83016965|dbj|BAE53488.1| hoxC6a [Oryzias latipes]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + S+S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQ--RMNSHSVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 178
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 179 TERQIKIWFQNRRMKWKKE 197
>gi|109944949|dbj|BAE97004.1| Ultrabithorax [Procambarus clarkii]
gi|109944952|dbj|BAE97006.1| Ultrabithorax [Procambarus clarkii]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 256 TLYPWMK--SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
T YPWM + + ++ G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 98 TFYPWMAIAARNNCPWTSGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 157
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 158 PCLTERQIKIWFQNRRMKLKKE 179
>gi|74267579|dbj|BAE44288.1| hoxD4a [Oryzias latipes]
gi|83016979|dbj|BAE53500.1| hoxD4a [Oryzias latipes]
Length = 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 19/164 (11%)
Query: 181 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQD- 239
Y R+N ++ + T VP D A+ +P DR +P A ++ P VQ
Sbjct: 51 YPRSNYTEQPFSCTT-VP-DPAV------QPRAHVHDRANHPSHFAAQTDQ--GPPVQAA 100
Query: 240 ---SC----SVSSQQDHEGEDGATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLE 291
+C S +Q + + A +YPWMK + + TG KRSR Y+R Q LE
Sbjct: 101 GPRTCGQQQSTKTQNGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLE 160
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 161 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 204
>gi|405974999|gb|EKC39601.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 243
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 241 CSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
CS + EGE + YPWM S +R RQTY+R+QTLELEKEF +N+
Sbjct: 122 CSTGTPTTGEGETPPSFYPWM------SIVGPNSNQRRRGRQTYTRFQTLELEKEFKFNR 175
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 176 YLTRRRRIELSHMLCLTERQIKIWFQNRRMKEKKE 210
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 264
+P G + +G A + +P S SQQ H G+ A +YPWMK
Sbjct: 55 QPRGHAQEPSGPQEPFAAADDHCPAPATLSSSRGCSQQQHPKNGTLGKPPAIVYPWMKKV 114
Query: 265 QDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 323
S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+E QIKI
Sbjct: 115 HVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSECQIKI 174
Query: 324 WFQNRRMKLKKE 335
WFQNRRMK KK+
Sbjct: 175 WFQNRRMKWKKD 186
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 6/85 (7%)
Query: 251 GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
E+G L+ +M S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 112 AEEGCRLFVYM------SKFLLSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 165
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 166 AHALCLTERQIKIWFQNRRMKWKKE 190
>gi|109944933|dbj|BAE96994.1| Ultrabithorax [Moina macrocopa]
Length = 336
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 231 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLC 283
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 284 LTERQIKIWFQNRRMKLKKE 303
>gi|184185535|gb|ACC68936.1| homeobox A6 (predicted) [Rhinolophus ferrumequinum]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 234 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMK---SNQDASYSCKTGGGNKRSRQT 283
SP+ Q DS SV + H E D + +YPWM+ S A Y G +R RQT
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEVTDRKYTSPVYPWMQRMNSCAGAVY----GSHGRRGRQT 161
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 217
>gi|224045302|ref|XP_002192602.1| PREDICTED: homeobox protein Hox-A5 [Taeniopygia guttata]
Length = 348
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSR 281
+GVG S ++ SS+Q D +T +YPWM+ S+ G KR+R
Sbjct: 219 DGVGTSSGTEEDTPASSEQASAPTDQSTAQPSQPQIYPWMR-KLHISHDNIGGPEGKRAR 277
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 278 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 331
>gi|4322038|gb|AAD15929.1| homeobox protein [Petromyzon marinus]
Length = 303
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Query: 250 EGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
+GE+ +YPWMK N D +G KRSR Y+RYQTLELEKEFH+N+YL+R+R
Sbjct: 201 DGEEAPQIYPWMKKLHLNHDGI----SGSEGKRSRTAYTRYQTLELEKEFHFNRYLTRRR 256
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 257 RIEVANALCLSERQIKIWFQNRRMKWKKD 285
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+++ KR RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 115 MYPWMRASDPT---------RKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 165
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 166 SERQIKIWFQNRRMKWKKD 184
>gi|74267543|dbj|BAE44270.1| hoxB8a [Oryzias latipes]
gi|83016950|dbj|BAE53477.1| hoxB8a [Oryzias latipes]
Length = 274
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 65/104 (62%), Gaps = 17/104 (16%)
Query: 241 CSVSSQQDHEGEDG---------ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
C + GED L+PWM+ + G +R RQTYSRYQTLE
Sbjct: 112 CKLGGATGLGGEDADGTDQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTLE 163
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 164 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|354490177|ref|XP_003507236.1| PREDICTED: homeobox protein Hox-C6-like [Cricetulus griseus]
gi|344239245|gb|EGV95348.1| Homeobox protein Hox-C6 [Cricetulus griseus]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|48146025|emb|CAG33235.1| HOXC6 [Homo sapiens]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|226822848|gb|ACO83083.1| homeobox A4 (predicted) [Dasypus novemcinctus]
Length = 318
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 74/116 (63%), Gaps = 11/116 (9%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKR 279
G+ A + P +Q S + E +YPWMK S + SY+ GG KR
Sbjct: 164 GVPAGGSAPACPLLQADRSPPGLKGKE----PVVYPWMKKIHVSAVNPSYN---GGEPKR 216
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 217 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 272
>gi|327275820|ref|XP_003222670.1| PREDICTED: homeobox protein Hox-B8-like [Anolis carolinensis]
Length = 244
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 75/112 (66%), Gaps = 12/112 (10%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDGA----TLYPWMKSNQDASYSCKTGGGNKRSRQT 283
D++ V PD + + S + +D + + + L+PWM+ A G +R RQT
Sbjct: 102 DADLVQYPDCKLASSGALSEDADNAEQSPSPTQLFPWMRPQAAA--------GRRRGRQT 153
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 154 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 205
>gi|392301351|gb|AFM55061.1| ultrabithorax, partial [Microvelia sp. AK-2011a]
Length = 245
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 64/94 (68%), Gaps = 7/94 (7%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+V+ H+ T YPWM G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 156 AVAPSPLHQQASQHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHY 208
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 209 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 242
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 257 LYPWMKSNQDASYSCKTG--GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + G G +KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 52 IYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTL 111
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KKE
Sbjct: 112 CLSERQIKIWFQNRRMKWKKE 132
>gi|363746032|ref|XP_003643502.1| PREDICTED: homeobox protein Hox-C6-like [Gallus gallus]
Length = 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 248 DHEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
E + +YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R
Sbjct: 113 SQEQKTSIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQTLELEKEFHFNRYLTR 168
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 169 RRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|324516674|gb|ADY46601.1| Homeobox protein mab-5 [Ascaris suum]
Length = 200
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK S GG KR+RQTYSR QTLELEKEFHYNKYL+RKRR EI+ LQL
Sbjct: 107 VFPWMK------MSGGKGGEAKRTRQTYSRNQTLELEKEFHYNKYLTRKRRQEISESLQL 160
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQ+KIWFQNRRMK KKE
Sbjct: 161 SERQVKIWFQNRRMKHKKE 179
>gi|274317370|ref|NP_001069602.2| homeobox protein Hox-A4 [Bos taurus]
gi|296488417|tpg|DAA30530.1| TPA: homeobox A4 isoform 1 [Bos taurus]
Length = 319
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 77/137 (56%), Gaps = 15/137 (10%)
Query: 211 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 262
PP R P R +P V S + + G G +YPWMK
Sbjct: 139 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 198
Query: 263 ----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+E
Sbjct: 199 KIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSE 255
Query: 319 RQIKIWFQNRRMKLKKE 335
RQ+KIWFQNRRMK KK+
Sbjct: 256 RQVKIWFQNRRMKWKKD 272
>gi|392495361|gb|AFM74330.1| homeodomain protein HoxA4ai, partial [tetraploid Carassius auratus
red var. x Megalobrama amblycephala]
Length = 206
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKS----NQDASYSCKTGGGN 277
G R + CS+ S+ + G +YPWMK + ASYS GG
Sbjct: 91 GPRLTTESCAGSAANKDCSLVSEALPGAQKGKEPVVYPWMKKVHVNSVTASYS---GGVP 147
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 205
>gi|46275810|ref|NP_032291.1| homeobox protein Hox-A4 [Mus musculus]
gi|26345064|dbj|BAC36181.1| unnamed protein product [Mus musculus]
gi|148666239|gb|EDK98655.1| homeobox A4 [Mus musculus]
Length = 285
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 9/95 (9%)
Query: 247 QDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
Q G G +YPWMK S ++SY+ GG KRSR Y+R Q LELEKEFH+N+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYN---GGEPKRSRTAYTRQQVLELEKEFHFNR 203
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 204 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
>gi|348519803|ref|XP_003447419.1| PREDICTED: homeobox protein Hox-D4a [Oreochromis niloticus]
Length = 265
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +R +P A + V + QQ+ + ++G A +YPWMK
Sbjct: 102 QPRGHVHERASHPSHFSAQTEQGTPVQVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 161
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 162 VHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 221
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 222 IWFQNRRMKWKKD 234
>gi|322366542|gb|ADW95345.1| Hox7 [Paracentrotus lividus]
Length = 321
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
YPWM A + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L LT
Sbjct: 186 YPWMPV---AGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLT 242
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMK KKE
Sbjct: 243 ERQIKIWFQNRRMKYKKE 260
>gi|8182211|gb|AAB28662.2| Hoxa-4 [Mus sp.]
gi|9488660|gb|AAB30705.2| Hoxa-4 [Mus sp.]
Length = 285
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 9/95 (9%)
Query: 247 QDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
Q G G +YPWMK S ++SY+ GG KRSR Y+R Q LELEKEFH+N+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYN---GGEPKRSRTAYTRQQVLELEKEFHFNR 203
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 204 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
>gi|6166218|sp|P06798.4|HXA4_MOUSE RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein MH-3
Length = 285
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 9/95 (9%)
Query: 247 QDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
Q G G +YPWMK S ++SY+ GG KRSR Y+R Q LELEKEFH+N+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYN---GGEPKRSRTAYTRQQVLELEKEFHFNR 203
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 204 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
>gi|190576600|gb|ACE79088.1| homeobox A5 (predicted) [Sorex araneus]
Length = 468
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 351 APASSEPASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 409
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 410 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 451
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 257 LYPWMKSNQDASYSCKTG--GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + G G +KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 126 IYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTL 185
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KKE
Sbjct: 186 CLSERQIKIWFQNRRMKWKKE 206
>gi|359754086|gb|AEV59509.1| HOXA5, partial [Macropus eugenii]
Length = 265
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Query: 231 GVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSRQ 282
GVG S +D SS+Q D + +YPWM+ S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPAQPQIYPWMR-KLHISHDNIGGPEGKRART 199
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|229577337|ref|NP_571613.1| homeobox protein Hox-B6b [Danio rerio]
gi|190337106|gb|AAI62868.1| Homeo box B6b [Danio rerio]
gi|190338163|gb|AAI62890.1| Homeo box B6b [Danio rerio]
Length = 224
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|81673924|gb|AAI09945.1| Homeobox A4 [Bos taurus]
Length = 253
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 78/137 (56%), Gaps = 15/137 (10%)
Query: 211 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 262
PP R P R +P V S + + G G +YPWMK
Sbjct: 73 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 132
Query: 263 ----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH+L L+E
Sbjct: 133 KIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHKLCLSE 189
Query: 319 RQIKIWFQNRRMKLKKE 335
RQ+KIWFQNRRMK KK+
Sbjct: 190 RQVKIWFQNRRMKWKKD 206
>gi|60392424|sp|Q9YGT4.2|HXB6B_DANRE RecName: Full=Homeobox protein Hox-B6b; AltName: Full=Homeobox
protein Hox-A7
gi|22316135|emb|CAD44457.1| homeo box protein B6b [Danio rerio]
Length = 224
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|345322207|ref|XP_003430544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ornithorhynchus anatinus]
Length = 281
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 8/105 (7%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTL 290
P V S SS EG ++PWM+ S+ + +Y TGG KRSR Y+R Q L
Sbjct: 151 PRVPPEPSASSTAATEG-PAPQIFPWMRKLHISHVNPNY---TGGEPKRSRTAYTRQQVL 206
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
ELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 207 ELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 251
>gi|121308920|dbj|BAF43725.1| transcription factor Hox7 [Metacrinus rotundus]
Length = 256
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 7/80 (8%)
Query: 258 YPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
YPWM + TG G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L
Sbjct: 144 YPWMNVT-----AAPTGVEMGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLG 198
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 199 LTERQIKIWFQNRRMKYKKE 218
>gi|400180326|gb|AFP73294.1| Hoxa5alpha [Polyodon spathula]
Length = 275
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
Query: 230 NGVG-SPDVQDSCSVSSQQ--DHEGEDGAT-----LYPWMKSNQDASYSCKTGGGNKRSR 281
+GVG S +D SS Q G++ + +YPWM+ S+ G KR+R
Sbjct: 146 DGVGKSSGTEDDTPASSGQTSSQNGQNASESSQPQIYPWMR-KLHMSHDSMAGPEGKRAR 204
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 258
>gi|432933125|ref|XP_004081817.1| PREDICTED: homeobox protein Hox-D4a-like [Oryzias latipes]
Length = 256
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 19/164 (11%)
Query: 181 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQD- 239
Y R+N ++ + T VP D A+ +P DR +P A ++ P VQ
Sbjct: 71 YPRSNYTEQPFSCTT-VP-DPAV------QPRAHVHDRANHPSHFAAQTDQ--GPPVQAA 120
Query: 240 ---SC----SVSSQQDHEGEDGATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLE 291
+C S +Q + + A +YPWMK + + TG KRSR Y+R Q LE
Sbjct: 121 GPRTCGQQQSTKTQNGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLE 180
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 181 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 224
>gi|126341819|ref|XP_001362736.1| PREDICTED: homeobox protein Hox-A5-like [Monodelphis domestica]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Query: 231 GVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSRQ 282
GVG S +D SS+Q D + +YPWM+ S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPAQPQIYPWMR-KLHISHDNIGGPEGKRART 199
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|328778410|ref|XP_001120045.2| PREDICTED: hypothetical protein LOC724252 [Apis mellifera]
Length = 565
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 304 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 363
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 364 TLVLSERQIKIWFQNRRMKWKKD 386
>gi|18026216|gb|AAL25809.1| antennapedia homeodomain protein [Euprymna scolopes]
Length = 93
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 8 IYPWMRS--------QYGPHRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 59
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 60 TERQIKIWFQNRRMKWKKE 78
>gi|432882501|ref|XP_004074062.1| PREDICTED: homeobox protein Hox-A4-like [Oryzias latipes]
Length = 402
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%), Gaps = 10/115 (8%)
Query: 227 ADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRS 280
A +G G+ +D CS+ S+ G +YPWMK S +ASY+ GG KRS
Sbjct: 250 APDSGAGTNASKD-CSLGSEVYPGVAKGKEPVVYPWMKKVHVSTVNASYN---GGVPKRS 305
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE
Sbjct: 306 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKE 360
>gi|3581946|emb|CAA64696.1| homeodomain protein [Girardia tigrina]
Length = 259
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
LY WM N +S NKR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 153 VMLYSWM--NPKSSGDNTNNTNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHTL 210
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 211 ILTERQIKIWFQNRRMKWKKE 231
>gi|345323595|ref|XP_003430728.1| PREDICTED: homeobox protein Hox-A5-like [Ornithorhynchus anatinus]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Query: 231 GVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNQDASYSCKTGGGNKRSRQ 282
GVG S +D SS+Q D + +YPWM+ S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPSQPQIYPWMR-KLHISHDNIGGPEGKRART 199
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|395830948|ref|XP_003788574.1| PREDICTED: homeobox protein Hox-A5 [Otolemur garnettii]
gi|202070727|gb|ACH95315.1| homeobox A5 (predicted) [Otolemur garnettii]
Length = 270
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|19070093|emb|CAD24770.1| HOM-C transcription factor [Oscheius tipulae]
Length = 194
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 253 DGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
GA +YPWM +S + G KR R Y+R Q LELEKEFH+NKYL+RKRR+EIAH
Sbjct: 78 SGAAVYPWMTR----VHSNSSPRGEKRQRTAYTRVQVLELEKEFHFNKYLTRKRRLEIAH 133
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KKE
Sbjct: 134 ALTLTERQVKIWFQNRRMKHKKE 156
>gi|21362265|ref|NP_034591.1| homeobox protein Hox-B8 [Mus musculus]
gi|300793662|ref|NP_001178578.1| homeobox protein Hox-B8 [Rattus norvegicus]
gi|123259|sp|P09632.2|HXB8_MOUSE RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4
gi|51392|emb|CAA32000.1| unnamed protein product [Mus musculus]
gi|51397|emb|CAA38014.1| homeobox-2.4 intracisternal A-particle protein [Mus musculus]
gi|295919|emb|CAA32141.1| Hox-2.4 protein [Mus musculus]
gi|148684076|gb|EDL16023.1| homeobox B8 [Mus musculus]
gi|149053980|gb|EDM05797.1| homeo box B8 (mapped) [Rattus norvegicus]
gi|223460336|gb|AAI39213.1| Hoxb8 protein [Mus musculus]
gi|223461094|gb|AAI39210.1| Homeo box B8 [Mus musculus]
Length = 243
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|380028330|ref|XP_003697858.1| PREDICTED: uncharacterized protein LOC100873059 [Apis florea]
Length = 550
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 302 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 361
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 362 TLVLSERQIKIWFQNRRMKWKKD 384
>gi|328709798|ref|XP_001946891.2| PREDICTED: hypothetical protein LOC100161376 [Acyrthosiphon pisum]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 69/107 (64%), Gaps = 15/107 (14%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGG----GNKRSRQTYSRYQ 288
GSP + D D E D +YPWMK N A GG KR R Y+RYQ
Sbjct: 260 GSPIMMD--------DSESSD-RVIYPWMKKNHVAGM--PNGGYQPVDVKRQRTAYTRYQ 308
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 309 VLELEKEFHFNKYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKYKKD 355
>gi|305377066|ref|NP_001182161.1| homeobox protein Hox-A5 [Sus scrofa]
gi|217620801|gb|ACK56050.1| homeobox A5 [Sus scrofa]
gi|217620820|gb|ACK56051.1| homeobox A5 [Sus scrofa]
Length = 270
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|149705654|ref|XP_001499628.1| PREDICTED: homeobox protein Hox-A5-like [Equus caballus]
Length = 270
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|1333934|emb|CAA31022.1| unnamed protein product [Mus musculus]
Length = 221
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ S G +R RQ YSRYQTLEL
Sbjct: 84 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 142
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 143 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 185
>gi|172087584|ref|XP_001913334.1| Hox4.1 [Oikopleura dioica]
gi|48994254|gb|AAT47829.1| Hox4.1 [Oikopleura dioica]
Length = 197
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
Query: 238 QDSCSVSSQQDHEGEDGATL--YPWMKSNQDASYSC----KTGGGNKRSRQTYSRYQTLE 291
QD ++ + +D +L YPWM+ A + + G NKR R Y+R+QTLE
Sbjct: 84 QDDLGSCDSREKKSDDAKSLKIYPWMRRMHSAQLASENQQRPGNDNKRIRTAYTRHQTLE 143
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 144 LEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 187
>gi|297288644|ref|XP_001092687.2| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Macaca mulatta]
Length = 468
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 351 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 409
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 410 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 451
>gi|38004412|gb|AAR07505.1| Abd-A-like protein [Schistosoma mansoni]
Length = 718
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM S +R RQTYSRYQTLELEKEF Y+ YL+R+RRIEIAH L L
Sbjct: 499 IWPWMTVVGPNSVQ------RRRGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHNLCL 552
Query: 317 TERQIKIWFQNRRMKLKKEK 336
TERQIKIWFQNRRMKLKKE+
Sbjct: 553 TERQIKIWFQNRRMKLKKER 572
>gi|321475843|gb|EFX86805.1| putative homeotic Fushi-tarazu protein [Daphnia pulex]
Length = 428
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR+RQTY+RYQTLELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 284 KRTRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKAKKE 341
>gi|146324917|sp|A2D5Y4.1|HXA5_LEMCA RecName: Full=Homeobox protein Hox-A5
gi|122938186|gb|ABM68948.1| HOXA5 [Lemur catta]
Length = 270
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|301614398|ref|XP_002936684.1| PREDICTED: homeobox protein Hox-C4-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query: 240 SCSVSSQQDHEGEDGA---TLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKE 295
+C+ + +H + +YPWMK +S + TGG KRSR Y+R Q LELEKE
Sbjct: 152 ACTQAPTSEHPTNTASKQPIVYPWMKKIHVSSVNPNYTGGEPKRSRTAYTRQQVLELEKE 211
Query: 296 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
FHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 FHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 251
>gi|74267537|dbj|BAE44267.1| hoxB4a [Oryzias latipes]
gi|83016947|dbj|BAE53474.1| hoxB4a [Oryzias latipes]
Length = 253
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 73/114 (64%), Gaps = 14/114 (12%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKS-NQDASYSCKTGGGNKRSR 281
G A G SP S+++D +YPWMK + + S TGG KRSR
Sbjct: 121 CGQTAHGQGASSP-------ASTRKD------PVVYPWMKKVHVNIVNSSYTGGEPKRSR 167
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 168 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 221
>gi|350405520|ref|XP_003487460.1| PREDICTED: hypothetical protein LOC100747283 [Bombus impatiens]
Length = 543
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 301 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 360
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 361 TLVLSERQIKIWFQNRRMKWKKD 383
>gi|340727743|ref|XP_003402196.1| PREDICTED: hypothetical protein LOC100642982 [Bombus terrestris]
Length = 543
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 301 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 360
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 361 TLVLSERQIKIWFQNRRMKWKKD 383
>gi|345323597|ref|XP_001510583.2| PREDICTED: homeobox protein Hox-A6-like [Ornithorhynchus anatinus]
Length = 232
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 7/112 (6%)
Query: 234 SPDVQ---DSCSVSSQQDHEGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
SP+ Q DS S + EG D + +YPWM+ ++ G +R RQTY+RY
Sbjct: 106 SPEQQYKSDSSVQSKILNDEGTDRKYTSPVYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRY 164
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
QTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 165 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLI 216
>gi|327263838|ref|XP_003216724.1| PREDICTED: homeobox protein Hox-C6-like [Anolis carolinensis]
Length = 236
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
E + +YPWM+ S G +R RQ YSRYQTLELEKEFH+N+YL+R+RR
Sbjct: 113 SQEQKTSIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRR 171
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 172 IEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|242011840|ref|XP_002426652.1| Homeobox protein Hox-A4A, putative [Pediculus humanus corporis]
gi|212510816|gb|EEB13914.1| Homeobox protein Hox-A4A, putative [Pediculus humanus corporis]
Length = 259
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 244 SSQQDHEGEDGA--TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHY 298
S D EG + +YPWMK A S + G KR R Y+R+Q LELEKEFH+
Sbjct: 31 SPDMDDEGSESGDRVIYPWMKKIHVAGVANGSFRPGMEPKRQRTAYTRHQILELEKEFHF 90
Query: 299 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 91 NKYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKFKKD 127
>gi|213514608|ref|NP_001133034.1| homeobox protein HoxA5aa [Salmo salar]
gi|157816043|gb|ABV82040.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Query: 253 DGAT--LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
DGA +YPWM+ N D+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 180 DGAQPHIYPWMRKLHINHDS----LTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRR 235
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 236 IEIAHALCLSERQIKIWFQNRRMKWKKD 263
>gi|18858853|ref|NP_571605.1| homeobox protein Hox-C6b [Danio rerio]
gi|60392445|sp|Q9PWM5.1|HXC6B_DANRE RecName: Full=Homeobox protein Hox-C6b
gi|4322100|gb|AAD15959.1| homeobox protein [Danio rerio]
Length = 227
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 74/115 (64%), Gaps = 17/115 (14%)
Query: 236 DVQDSC-------SVSSQQDHEGEDGAT--------LYPWMKSNQDASYSCKTGGGNKRS 280
DV SC S QD+ + G T +YPWM+ + S+ G +R
Sbjct: 81 DVLPSCRQGFGQTQGSLTQDYASDQGKTVEPKGVVQIYPWMQ--RMNSHRVGYGSDRRRG 138
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQ YSRYQTLELEKEFHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 139 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 193
>gi|4322076|gb|AAD15947.1| homeobox protein [Danio rerio]
Length = 244
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 257 LYPWMKSNQDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWM+ SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|47216997|emb|CAG01625.1| unnamed protein product [Tetraodon nigroviridis]
Length = 568
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 58 VVYPWMKKVHVNIVSSSYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 117
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 118 CLSERQIKIWFQNRRMKWKKD 138
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEK 336
R+E+A+ L L+ERQIKIWFQNRRMK KK++
Sbjct: 336 RVEMANLLNLSERQIKIWFQNRRMKYKKDQ 365
>gi|383849609|ref|XP_003700437.1| PREDICTED: uncharacterized protein LOC100877385 [Megachile
rotundata]
Length = 536
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 296 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 355
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 356 TLVLSERQIKIWFQNRRMKWKKD 378
>gi|301128884|emb|CBL59347.1| HoxB8 [Scyliorhinus canicula]
Length = 234
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCSVSSQQDHEGEDGAT---LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + + + ++ E ++ L+PWM+ + G +R RQTYSRYQTLE
Sbjct: 110 PDCKSTANSLGEEAENSEQSSSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTLE 161
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 162 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 205
>gi|348562277|ref|XP_003466937.1| PREDICTED: homeobox protein Hox-B5-like isoform 1 [Cavia porcellus]
Length = 270
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 76/113 (67%), Gaps = 12/113 (10%)
Query: 229 SNGVGSPDV---QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQ 282
S+ +GSP + Q +S EG+ ++PWM+ + D TG KR+R
Sbjct: 147 SSQLGSPSLARAQPEPMATSTAAPEGQ-APQIFPWMRKLHISHD-----MTGPDGKRART 200
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 201 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|429510510|gb|AFZ94993.1| transcription factor Hox8 [Petromyzon marinus]
Length = 274
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 240 SCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 299
S ++ H A ++PWM+ G G +R RQTYSR+QTLELEKEF +N
Sbjct: 146 SVGEETEASHLSYTAAQMFPWMRPQ---------GPGRRRGRQTYSRFQTLELEKEFLFN 196
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 197 PYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 232
>gi|255742476|gb|ACU32588.1| homeobox protein HoxD5 [Callorhinchus milii]
Length = 249
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ NQ+ G KR+R Y+RYQTLELEKEFHYN+YL+R+RRIEIAH
Sbjct: 155 IYPWMRKLHLNQEG----LGGTEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 210
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 211 LCLTERQIKIWFQNRRMKWKKD 232
>gi|432871988|ref|XP_004072061.1| PREDICTED: homeobox protein Hox-B4a-like, partial [Oryzias latipes]
Length = 251
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 73/114 (64%), Gaps = 14/114 (12%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKS-NQDASYSCKTGGGNKRSR 281
G A G SP S+++D +YPWMK + + S TGG KRSR
Sbjct: 121 CGQTAHGQGASSP-------ASTRKD------PVVYPWMKKVHVNIVNSSYTGGEPKRSR 167
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 168 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 221
>gi|321475838|gb|EFX86800.1| putative homeotic abdominal-A protein [Daphnia pulex]
Length = 383
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 85/138 (61%), Gaps = 13/138 (9%)
Query: 207 VDGKPPGFNMDRNGNPVGLRADSNGV---GSPDVQDS--CSVSSQQDHEGEDGATLYPWM 261
VD P + G P GL A + GV G PD+ S++ G DG+ +
Sbjct: 147 VDPNNPLSACSQGGPPTGLGALA-GVHSGGGPDIPRYPWMSITGFPYATGMDGSGSF--- 202
Query: 262 KSNQDASYSCKTGGGN----KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
S+ S++ G N +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 203 ASHDGFSHAGICSGPNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLT 262
Query: 318 ERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMKLKKE
Sbjct: 263 ERQIKIWFQNRRMKLKKE 280
>gi|213513255|ref|NP_001133000.1| homeobox protein HoxC6aa [Salmo salar]
gi|157815942|gb|ABV81990.1| homeobox protein HoxC6aa [Salmo salar]
gi|158702328|gb|ABW77519.1| homeobox protein HoxC6aa [Salmo salar]
Length = 231
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMK---SNQD 266
K G R +GL A N + D +SQ E + +YPWM+ S+
Sbjct: 82 KDGGLASCRQTTSMGLNAQ-NHIAQEYSLDQARGASQ---EQKANVQIYPWMQRMNSHSG 137
Query: 267 ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQ 326
Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQ
Sbjct: 138 VGY----GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 193
Query: 327 NRRMKLKKE 335
NRRMK KKE
Sbjct: 194 NRRMKWKKE 202
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKD 205
>gi|351713531|gb|EHB16450.1| Homeobox protein Hox-B5 [Heterocephalus glaber]
Length = 245
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 12/113 (10%)
Query: 229 SNGVGSPD---VQDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQ 282
S+ +GSP Q +S EG+ ++PWM+ + D TG KR+R
Sbjct: 122 SSQLGSPSRARAQPEPMATSTAAPEGQ-APQIFPWMRKLHISHD-----MTGPDGKRART 175
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 176 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 228
>gi|88604724|gb|ABD46733.1| homeobox protein ultrabithorax [Endeis spinosa]
Length = 273
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+ YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 158 SFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 210
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 211 LTERQIKIWFQNRRMKLKKE 230
>gi|348564420|ref|XP_003468003.1| PREDICTED: homeobox protein Hox-A5-like [Cavia porcellus]
Length = 270
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEPASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|443689509|gb|ELT91883.1| hypothetical protein CAPTEDRAFT_94879 [Capitella teleta]
Length = 89
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+S + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 1 MYPWMRS--------QFGPERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 52
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 53 TERQIKIWFQNRRMKWKKE 71
>gi|46395474|ref|NP_997060.1| homeobox protein Hox-D8 [Gallus gallus]
gi|123283|sp|P23459.1|HXD8_CHICK RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-M; Short=Chox-M
gi|62701|emb|CAA40445.1| CHOX M product [Gallus gallus]
Length = 188
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 11/111 (9%)
Query: 228 DSNGVGSPDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTY 284
++ V PD + S + + + DH + A ++PWM+ + G +R RQTY
Sbjct: 51 EAELVQYPDCKSSSANIGEEPDHLNQSSSPAQMFPWMRP--------QAAPGRRRGRQTY 102
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 103 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 153
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKD 205
>gi|296488418|tpg|DAA30531.1| TPA: homeobox A4 isoform 2 [Bos taurus]
Length = 253
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 77/137 (56%), Gaps = 15/137 (10%)
Query: 211 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 262
PP R P R +P V S + + G G +YPWMK
Sbjct: 73 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 132
Query: 263 ----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 318
S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+E
Sbjct: 133 KIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSE 189
Query: 319 RQIKIWFQNRRMKLKKE 335
RQ+KIWFQNRRMK KK+
Sbjct: 190 RQVKIWFQNRRMKWKKD 206
>gi|7986|emb|CAA25408.1| ftz protein [Drosophila melanogaster]
Length = 413
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|309253977|gb|ADO60877.1| antennapedia [Bicyclus anynana]
Length = 150
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ LYPW++S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 75 SPLYPWIRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 124
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KKE
Sbjct: 125 CLTERQIKIWFQNRRMKWKKE 145
>gi|1708345|sp|P52949.1|HXA5_RAT RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3
gi|204644|gb|AAA67844.1| hox1.3 protein, partial [Rattus norvegicus]
Length = 233
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 155 IYPWMR-KLHISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 213
Query: 317 TERQIKIWFQNRRMKLKKEK 336
+ERQIKIWFQNRRMK KK+K
Sbjct: 214 SERQIKIWFQNRRMKWKKDK 233
>gi|229577325|ref|NP_571256.1| homeobox protein Hox-B8b [Danio rerio]
gi|60392414|sp|Q8JH55.1|HXB8B_DANRE RecName: Full=Homeobox protein Hox-B8b; AltName: Full=Homeobox
protein Hox-A8
gi|22316134|emb|CAD44456.1| homeo box protein B8b [Danio rerio]
gi|190337844|gb|AAI62153.1| Homeo box B8b [Danio rerio]
gi|190338644|gb|AAI62167.1| Homeo box B8b [Danio rerio]
Length = 247
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 60/81 (74%), Gaps = 9/81 (11%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
A L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L
Sbjct: 132 AQLFPWMRPQAT---------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHAL 182
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
LTERQ+KIWFQNRRMK KKE
Sbjct: 183 ALTERQVKIWFQNRRMKWKKE 203
>gi|13273317|ref|NP_076921.1| homeobox protein Hox-B8 [Homo sapiens]
gi|300116176|ref|NP_001177816.1| homeobox protein Hox-B8 [Macaca mulatta]
gi|296202577|ref|XP_002748517.1| PREDICTED: homeobox protein Hox-B8 [Callithrix jacchus]
gi|335297810|ref|XP_003358122.1| PREDICTED: homeobox protein Hox-B8-like [Sus scrofa]
gi|395826622|ref|XP_003786516.1| PREDICTED: homeobox protein Hox-B8 [Otolemur garnettii]
gi|397514560|ref|XP_003827549.1| PREDICTED: homeobox protein Hox-B8 [Pan paniscus]
gi|403279483|ref|XP_003931279.1| PREDICTED: homeobox protein Hox-B8 [Saimiri boliviensis
boliviensis]
gi|426347614|ref|XP_004041444.1| PREDICTED: homeobox protein Hox-B8 [Gorilla gorilla gorilla]
gi|20141506|sp|P17481.2|HXB8_HUMAN RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4; AltName: Full=Homeobox protein Hox-2D
gi|11993911|gb|AAG42143.1| HOXB8 [Homo sapiens]
gi|119615130|gb|EAW94724.1| homeobox B8, isoform CRA_b [Homo sapiens]
gi|146327438|gb|AAI41561.1| Homeobox B8 [synthetic construct]
gi|208966500|dbj|BAG73264.1| homeobox B8 [synthetic construct]
gi|281344384|gb|EFB19968.1| hypothetical protein PANDA_005015 [Ailuropoda melanoleuca]
gi|410207798|gb|JAA01118.1| homeobox B8 [Pan troglodytes]
Length = 243
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|133740636|emb|CAL91856.1| sex comb reduced-1 [Cupiennius salei]
Length = 110
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 3 IYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 62
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 63 SERQIKIWFQNRRMKWKKE 81
>gi|255742477|gb|ACU32589.1| homeobox protein HoxD4 [Callorhinchus milii]
Length = 238
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 74/116 (63%), Gaps = 15/116 (12%)
Query: 232 VGSPDVQDSCSVSSQQDHEGED--------GATLYPWMKS----NQDASYSCKTGGGNKR 279
G+P + +QQ H + A +YPWMK N + +Y TGG KR
Sbjct: 92 AGAPLQVSTARPCNQQQHNARNQNGTATKQPAVVYPWMKKIHVNNVNPNY---TGGEPKR 148
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 149 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 204
>gi|281182590|ref|NP_001162368.1| homeobox protein Hox-A5 [Papio anubis]
gi|114612539|ref|XP_519011.2| PREDICTED: homeobox protein Hox-A5 isoform 2 [Pan troglodytes]
gi|297680784|ref|XP_002818148.1| PREDICTED: homeobox protein Hox-A5 [Pongo abelii]
gi|426355744|ref|XP_004045268.1| PREDICTED: homeobox protein Hox-A5 [Gorilla gorilla gorilla]
gi|160904219|gb|ABX52203.1| homeobox A5 (predicted) [Papio anubis]
gi|410207368|gb|JAA00903.1| homeobox A5 [Pan troglodytes]
gi|410249078|gb|JAA12506.1| homeobox A5 [Pan troglodytes]
gi|410249080|gb|JAA12507.1| homeobox A5 [Pan troglodytes]
gi|410333157|gb|JAA35525.1| homeobox A5 [Pan troglodytes]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|116004415|ref|NP_001070566.1| homeobox protein Hox-A5 [Bos taurus]
gi|73976525|ref|XP_539487.2| PREDICTED: homeobox protein Hox-A5 [Canis lupus familiaris]
gi|110279014|sp|Q2HJ67.1|HXA5_BOVIN RecName: Full=Homeobox protein Hox-A5
gi|87578311|gb|AAI13285.1| Homeobox A5 [Bos taurus]
gi|170649678|gb|ACB21263.1| homeobox A5 (predicted) [Callicebus moloch]
gi|296488406|tpg|DAA30519.1| TPA: homeobox protein Hox-A5 [Bos taurus]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|220898182|gb|ACL81438.1| HoxA6 [Latimeria menadoensis]
Length = 230
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ ++ + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 133 IFPWMQ-RMNSCTGTEYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 191
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 192 TERQIKIWFQNRRMKWKKESKLL 214
>gi|332692486|gb|AEE90166.1| Homeobox B8a [Anguilla anguilla]
gi|385654477|gb|AFI61978.1| Hox-B8a [Anguilla japonica]
Length = 248
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 136 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 187
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 188 TERQVKIWFQNRRMKWKKE 206
>gi|293358572|ref|XP_002729358.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
gi|392347314|ref|XP_003749796.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
Length = 285
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 67/95 (70%), Gaps = 9/95 (9%)
Query: 247 QDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
Q G G +YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNR 203
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 204 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
>gi|403287991|ref|XP_003935201.1| PREDICTED: homeobox protein Hox-A5 [Saimiri boliviensis
boliviensis]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|146324916|sp|A2D5K9.1|HXA5_LAGLA RecName: Full=Homeobox protein Hox-A5
gi|122934911|gb|ABM68201.1| HOXA5 [Lagothrix lagotricha]
gi|167427228|gb|ABZ80209.1| homeobox A5 (predicted) [Callithrix jacchus]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|57091665|ref|XP_548179.1| PREDICTED: homeobox protein Hox-B8 [Canis lupus familiaris]
Length = 243
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|256014529|gb|ACU56819.1| HOXB7 [Pantherophis spiloides]
Length = 129
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 82/141 (58%), Gaps = 26/141 (18%)
Query: 204 SEMVDGKPPG------------FNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE- 250
S VD +PPG FNM + L G S + +C+ S Q+D +
Sbjct: 1 SNYVDPQPPGMYSSGYGLDTSSFNMHCSPFEQNLSMMCPGDAS---KPNCNKSDQRDTDL 57
Query: 251 -GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E +YPWM+S TG KR RQTY+RYQTLEL KEFHYN+YL+R+RRIE
Sbjct: 58 RHESNLRIYPWMRS---------TGTDRKRGRQTYTRYQTLELGKEFHYNRYLTRRRRIE 108
Query: 310 IAHELQLTERQIKIWFQNRRM 330
IAH L LTERQIKIWFQNRRM
Sbjct: 109 IAHALCLTERQIKIWFQNRRM 129
>gi|2911356|gb|AAC04332.1| homeobox protein HoxQ8 [Petromyzon marinus]
Length = 272
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 240 SCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 299
S ++ H A ++PWM+ G G +R RQTYSR+QTLELEKEF +N
Sbjct: 146 SVGEETEASHLSYTAAQMFPWMRPQ---------GPGRRRGRQTYSRFQTLELEKEFLFN 196
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 197 PYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 232
>gi|190339031|gb|AAI63163.1| Hoxc6b protein [Danio rerio]
Length = 228
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 72/115 (62%), Gaps = 16/115 (13%)
Query: 236 DVQDSC-------SVSSQQDHEGEDGAT--------LYPWMKSNQDASYSCKTGGGNKRS 280
DV SC S QD+ + G T +YPWM+ S G +R
Sbjct: 81 DVLPSCRQGFGQTQGSLTQDYASDQGKTMEPKGSVQIYPWMQRMNSHS-GVGYGSDRRRG 139
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQ YSRYQTLELEKEFHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 140 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 194
>gi|397472867|ref|XP_003807955.1| PREDICTED: homeobox protein Hox-A5 [Pan paniscus]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK +S + G KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 124 IYPWMKKLHVSSSNDPDGMDPKRARTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLDL 183
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 184 SERQIKIWFQNRRMKWKKE 202
>gi|157816015|gb|ABV82026.1| homeobox protein HoxD4aa [Salmo salar]
gi|158702368|gb|ABW77555.1| homeobox protein HoxD4aa [Salmo salar]
Length = 236
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +R +P A + V + QQ+ + + G +YPWMK
Sbjct: 72 QPRGHVHERASHPSPFTAQTEPCPPVQVTGPRTCGQQQNTKNQHGIQAKQPTVVYPWMKK 131
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 191
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 192 IWFQNRRMKWKKD 204
>gi|109944946|dbj|BAE97002.1| Ultrabithorax [Porcellio scaber]
Length = 248
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 118 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 170
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 171 LTERQIKIWFQNRRMKLKKE 190
>gi|58332666|ref|NP_001011405.1| homeobox A5 [Xenopus (Silurana) tropicalis]
gi|56789615|gb|AAH88772.1| homeobox A5 [Xenopus (Silurana) tropicalis]
Length = 274
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Query: 224 GLRADSNGVG-SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQ 282
GL A S +P D S + Q +YPWM+ S+ G KR+R
Sbjct: 146 GLGASSGAEDDAPASSDQASSQNSQSPAPSVQPQIYPWMR-KLHISHDNIGGPEGKRART 204
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 257
>gi|291389286|ref|XP_002711077.1| PREDICTED: homeobox C9-like [Oryctolagus cuniculus]
Length = 463
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
S QD E G T +YPWM+ ++ G +R RQ YSRYQTLEL
Sbjct: 326 TSIAQDFSPEQGRTAPQDQKASIQIYPWMQ-RMNSHSGVGYGADRRRGRQIYSRYQTLEL 384
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 385 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 427
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 276 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 182 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 241
>gi|154183798|gb|ABS70741.1| Hoxb5a [Haplochromis burtoni]
Length = 309
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 238 QDSCSVSSQQDHEGEDGAT--LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
Q+ S + G + T ++PWM+ + D TG KR+R Y+RYQTLEL
Sbjct: 195 QEGGPTGSAAGNTGSEAQTPQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLEL 249
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 250 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 292
>gi|431909014|gb|ELK12605.1| Homeobox protein Hox-A5 [Pteropus alecto]
Length = 231
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 114 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 172
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 173 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 214
>gi|290563452|ref|NP_001166809.1| abdominal A isoform 3 [Bombyx mori]
gi|164682500|gb|ABY66347.1| homeobox protein [Bombyx mori]
Length = 343
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 258 YPWMKSNQ-----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
YPWM D G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH
Sbjct: 194 YPWMSITDWMNPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 253
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMKLKKE
Sbjct: 254 ALCLTERQIKIWFQNRRMKLKKE 276
>gi|387668|gb|AAA58663.1| HOX 1.3 [Homo sapiens]
Length = 270
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|188504142|gb|ACD56189.1| FTZ [Drosophila simulans]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|24497517|ref|NP_061975.2| homeobox protein Hox-A5 [Homo sapiens]
gi|52788238|sp|P20719.2|HXA5_HUMAN RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1C
gi|15489147|gb|AAH13682.1| Homeobox A5 [Homo sapiens]
gi|32879831|gb|AAP88746.1| homeo box A5 [Homo sapiens]
gi|49457506|emb|CAG47052.1| HOXA5 [Homo sapiens]
gi|51094979|gb|EAL24223.1| homeo box A5 [Homo sapiens]
gi|61360384|gb|AAX41854.1| homeobox A5 [synthetic construct]
gi|119614279|gb|EAW93873.1| homeobox A5 [Homo sapiens]
gi|123994171|gb|ABM84687.1| homeobox A5 [synthetic construct]
gi|124126875|gb|ABM92210.1| homeobox A5 [synthetic construct]
gi|306921749|dbj|BAJ17954.1| homeobox A5 [synthetic construct]
Length = 270
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|385654458|gb|AFI61962.1| Hox-A5a [Anguilla japonica]
Length = 270
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMR-KLHISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 234
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|348517817|ref|XP_003446429.1| PREDICTED: homeobox protein Hox-B5a-like [Oreochromis niloticus]
Length = 309
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 238 QDSCSVSSQQDHEGEDGAT--LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLEL 292
Q+ S + G + T ++PWM+ + D TG KR+R Y+RYQTLEL
Sbjct: 195 QEGGPTGSAAGNTGSEAQTPQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLEL 249
Query: 293 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 250 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 292
>gi|307213515|gb|EFN88924.1| Homeotic protein deformed [Harpegnathos saltator]
Length = 531
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Query: 257 LYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 292 IFPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 351
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 352 LVLTERQIKIWFQNRRMKWKKD 373
>gi|220898181|gb|ACL81437.1| HoxA5 [Latimeria menadoensis]
Length = 268
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 9/113 (7%)
Query: 231 GVGSPDVQDSCSVSSQQDHEGEDGAT--------LYPWMKSNQDASYSCKTGGGNKRSRQ 282
GVG+ + + +S++ ++G + +YPWM+ S+ G KR+R
Sbjct: 140 GVGTSSGAEDDTPASREQPSSQNGQSTAQPSQPQIYPWMR-KLHISHDSIGGPEGKRART 198
Query: 283 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 199 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 251
>gi|164430219|gb|ABY55437.1| ftz [Drosophila mauritiana]
gi|164430221|gb|ABY55438.1| ftz [Drosophila mauritiana]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|164430215|gb|ABY55435.1| ftz [Drosophila mauritiana]
Length = 412
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 213 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 269
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 270 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 317
>gi|332692471|gb|AEE90153.1| Homeobox A5a [Anguilla anguilla]
Length = 270
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMR-KLHISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 234
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|188504140|gb|ACD56188.1| FTZ [Drosophila simulans]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|188504136|gb|ACD56186.1| FTZ [Drosophila simulans]
gi|188504138|gb|ACD56187.1| FTZ [Drosophila simulans]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|164430223|gb|ABY55439.1| ftz [Drosophila mauritiana]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|195568832|ref|XP_002102416.1| ftz [Drosophila simulans]
gi|194198343|gb|EDX11919.1| ftz [Drosophila simulans]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|47971144|dbj|BAD22529.1| LjHox6w Homeobox [Lethenteron camtschaticum]
Length = 85
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 3 IYPWMQ-RMNSHNGLGLGTDRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 61
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 62 TERQIKIWFQNRRMKWKKE 80
>gi|325260874|gb|ADZ04664.1| homeobox C6 [Notophthalmus viridescens]
Length = 234
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 7/90 (7%)
Query: 249 HEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E + +YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+
Sbjct: 114 QEQKTSIQIYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRR 169
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 170 RRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|395532651|ref|XP_003768383.1| PREDICTED: homeobox protein Hox-B8 [Sarcophilus harrisii]
gi|359754101|gb|AEV59523.1| HOXB8 [Macropus eugenii]
Length = 243
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 12/112 (10%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDGA----TLYPWMKSNQDASYSCKTGGGNKRSRQT 283
DS+ V D + + + ++ EG + + L+PWM+ A G +R RQT
Sbjct: 101 DSDLVQYADCKLAAANGLGEEAEGSEQSPSPTQLFPWMRPQAAA--------GRRRGRQT 152
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
YSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 153 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 204
>gi|347972377|ref|XP_003436886.1| AGAP004662-PB [Anopheles gambiae str. PEST]
gi|333467596|gb|EGK96614.1| AGAP004662-PB [Anopheles gambiae str. PEST]
Length = 370
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 23/127 (18%)
Query: 230 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS--------------------- 268
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 134 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 191
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 192 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 251
Query: 329 RMKLKKE 335
RMKLKKE
Sbjct: 252 RMKLKKE 258
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKD 205
>gi|120974241|gb|ABM46661.1| HOXA5 [Gorilla gorilla]
Length = 216
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 99 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 157
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 158 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 199
>gi|119364594|sp|O13074.2|HXB4A_FUGRU RecName: Full=Homeobox protein Hox-B4a; AltName: Full=FrHOXB-4
gi|94482798|gb|ABF22416.1| homeobox protein HoxB4a [Takifugu rubripes]
Length = 288
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 73/114 (64%), Gaps = 14/114 (12%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKS-NQDASYSCKTGGGNKRSR 281
G S G SP S+++D +YPWMK + + S TGG KRSR
Sbjct: 118 CGQTPHSQGASSP-------ASTRKD------PVVYPWMKKVHVNIVSSNYTGGEPKRSR 164
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 165 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 218
>gi|405976604|gb|EKC41105.1| Homeobox protein Hox-B7 [Crassostrea gigas]
Length = 208
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM S + + + KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 97 VFPWMGSTINGA---EVTYEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHLLGL 153
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 154 TERQIKIWFQNRRMKWKKD 172
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 7/90 (7%)
Query: 249 HEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E + +YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+
Sbjct: 114 QEQKSTVQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQTLELEKEFHFNRYLTRR 169
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 170 RRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|354474845|ref|XP_003499640.1| PREDICTED: hypothetical protein LOC100761150 [Cricetulus griseus]
Length = 364
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 255 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 305
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 306 TERQVKIWFQNRRMKWKKE 324
>gi|195344083|ref|XP_002038618.1| ftz [Drosophila sechellia]
gi|188504144|gb|ACD56190.1| FTZ [Drosophila sechellia]
gi|194133639|gb|EDW55155.1| ftz [Drosophila sechellia]
Length = 413
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 214 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 270
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 271 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 318
>gi|332259413|ref|XP_003278784.1| PREDICTED: homeobox protein Hox-B4 [Nomascus leucogenys]
Length = 251
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 12/119 (10%)
Query: 224 GLRADSNGVGSPDVQDSCS---VSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGG 276
G R ++ SP Q C+ + H +YPWM+ S + +Y+ GG
Sbjct: 107 GQRCEAVSSSSP--QPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA---GGE 161
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|301607693|ref|XP_002933441.1| PREDICTED: homeobox protein Hox-A9-like [Xenopus (Silurana)
tropicalis]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 255 ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+ +YPWM+ + G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L
Sbjct: 384 SPVYPWMQRVNSCTGPV-YGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANAL 442
Query: 315 QLTERQIKIWFQNRRMKLKKEKIVM 339
LTERQIKIWFQNRRMK KKE ++
Sbjct: 443 CLTERQIKIWFQNRRMKWKKESKLL 467
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRM 330
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRM
Sbjct: 187 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 239
>gi|220898217|gb|ACL81470.1| HoxD8 [Latimeria menadoensis]
Length = 234
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
++ E + ++PWM+S + G +R RQTYSR+QTLELEKEF +N YL+RKR
Sbjct: 119 EEQETSSPSQMFPWMRS--------QAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKR 170
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 171 RIEVSHSLGLTERQIKIWFQNRRMKWKKE 199
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 26/214 (12%)
Query: 134 SFDKDAKYFDKD--PAKYY--DNFLNHNAMNYNQMNAFNQF-HMKLNPNHTDYLRTNSDK 188
S+ ++KY D P + Y +++L Y + + F H L Y R+N +
Sbjct: 5 SYMVNSKYVDPKFPPCEEYLQNSYLGEQGAEYYSASQGSDFQHQGL------YPRSNYSE 58
Query: 189 ETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQD 248
+ + +N + A+ +P G +++G + +P + +S + S Q
Sbjct: 59 QPFSCSNA--QGSAV------QPRGHGQEQSGPASHFPGQAEHCPTPPMPNSRACSQQPA 110
Query: 249 HEGEDG------ATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKY 301
+ +G A +YPWMK S + GG KRSR Y+R Q LELEKEFH+N+Y
Sbjct: 111 LKPPNGSAVKQPAVVYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRY 170
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 171 LTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 204
>gi|32879829|gb|AAP88745.1| homeo box A5 [synthetic construct]
gi|61370206|gb|AAX43454.1| homeobox A5 [synthetic construct]
gi|61370212|gb|AAX43455.1| homeobox A5 [synthetic construct]
Length = 271
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|301617263|ref|XP_002938067.1| PREDICTED: homeobox protein Hox-B8-like [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 185 TERQVKIWFQNRRMKWKKE 203
>gi|260835437|ref|XP_002612715.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
gi|229298094|gb|EEN68724.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
Length = 122
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++S TG NKR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 27 MYPWMRKIH-LNHSAGTGD-NKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 84
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 85 TERQIKIWFQNRRMKWKKE 103
>gi|126343889|ref|XP_001364878.1| PREDICTED: homeobox protein Hox-C6 [Monodelphis domestica]
gi|395540853|ref|XP_003772365.1| PREDICTED: homeobox protein Hox-C6 [Sarcophilus harrisii]
gi|359754108|gb|AEV59529.1| HOXC6 [Macropus eugenii]
Length = 235
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 181 TERQIKIWFQNRRMKWKKE 199
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 256 TLYPWMKSNQ--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWMK + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 162 VMYPWMKRAHIHPGVGAAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHA 221
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KK+
Sbjct: 222 LGLTERQVKIWFQNRRMKWKKD 243
>gi|359754087|gb|AEV59510.1| HOXA6 [Macropus eugenii]
Length = 234
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 135 VYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 193
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
TERQIKIWFQNRRMK KKE ++
Sbjct: 194 TERQIKIWFQNRRMKWKKENKLL 216
>gi|74267539|dbj|BAE44268.1| hoxB5a [Oryzias latipes]
gi|83016948|dbj|BAE53475.1| hoxB5a [Oryzias latipes]
Length = 311
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 217 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 271
Query: 314 LQLTERQIKIWFQNRRMKLKKEKIV 338
L LTERQIKIWFQNRRMK KK+ V
Sbjct: 272 LCLTERQIKIWFQNRRMKWKKDNKV 296
>gi|224045304|ref|XP_002194920.1| PREDICTED: homeobox protein Hox-A6 [Taeniopygia guttata]
Length = 231
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 134 VYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 192
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 193 TERQIKIWFQNRRMKWKKE 211
>gi|21755659|dbj|BAC04730.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|449268333|gb|EMC79202.1| Homeobox protein Hox-A6 [Columba livia]
Length = 231
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 134 VYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 192
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 193 TERQIKIWFQNRRMKWKKE 211
>gi|17137784|ref|NP_477498.1| fushi tarazu [Drosophila melanogaster]
gi|25453437|sp|P02835.2|FTZ_DROME RecName: Full=Segmentation protein fushi tarazu
gi|4389424|gb|AAD19794.1| segmentation gene [Drosophila melanogaster]
gi|7298874|gb|AAF54081.1| fushi tarazu [Drosophila melanogaster]
gi|66571204|gb|AAY51567.1| IP01266p [Drosophila melanogaster]
gi|220943404|gb|ACL84245.1| ftz-PA [synthetic construct]
gi|220953312|gb|ACL89199.1| ftz-PA [synthetic construct]
Length = 410
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 211 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 267
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 268 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 315
>gi|47115878|sp|Q8T940.1|UBX_JUNCO RecName: Full=Homeotic protein ultrabithorax; AltName: Full=JcUbx
gi|18535620|gb|AAL71873.1| ultrabithorax [Junonia coenia]
Length = 253
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 145 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 197
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 198 LTERQIKIWFQNRRMKLKKE 217
>gi|30047742|gb|AAH50442.1| Homeobox C4 [Homo sapiens]
gi|167773153|gb|ABZ92011.1| homeobox C6 [synthetic construct]
gi|312153060|gb|ADQ33042.1| homeobox C4 [synthetic construct]
Length = 264
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|213515508|ref|NP_001133039.1| homeobox protein HoxA7ab [Salmo salar]
gi|157816061|gb|ABV82049.1| homeobox protein HoxA7ab [Salmo salar]
Length = 252
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+++ KR RQTYSRYQTLELEKEFH+N+YL+R+RR+EIAH L L
Sbjct: 115 MYPWMRTSDP---------NRKRGRQTYSRYQTLELEKEFHFNRYLNRRRRVEIAHVLCL 165
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 166 TERQIKIWFQNRRMKWKKD 184
>gi|432871986|ref|XP_004072060.1| PREDICTED: homeobox protein Hox-B5a-like, partial [Oryzias latipes]
Length = 294
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 200 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 254
Query: 314 LQLTERQIKIWFQNRRMKLKKEKIV 338
L LTERQIKIWFQNRRMK KK+ V
Sbjct: 255 LCLTERQIKIWFQNRRMKWKKDNKV 279
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHANSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|355695025|gb|AER99869.1| homeobox B7 [Mustela putorius furo]
Length = 188
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 67/101 (66%), Gaps = 11/101 (10%)
Query: 230 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNR 188
>gi|332692496|gb|AEE90175.1| Homeobox B8b [Anguilla anguilla]
gi|385654489|gb|AFI61988.1| Hox-B8b [Anguilla japonica]
Length = 248
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 135 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 186
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 187 TERQVKIWFQNRRMKWKKE 205
>gi|190576599|gb|ACE79087.1| homeobox A4 (predicted) [Sorex araneus]
Length = 298
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 74/116 (63%), Gaps = 11/116 (9%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKR 279
G+ A + P + S + + E +YPWMK S + SY+ GG KR
Sbjct: 147 GVPAGGSAPACPLLLADKSAAGPKGKE----PVVYPWMKKIHVSAVNPSYN---GGEPKR 199
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 200 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKKD 255
>gi|387862364|gb|AFK08968.1| ultrabithorax variant a, partial [Bicyclus anynana]
Length = 234
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 144 TFYPWMAIA-------GANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 196
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 197 LTERQIKIWFQNRRMKLKKE 216
>gi|164430217|gb|ABY55436.1| ftz [Drosophila mauritiana]
Length = 412
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 213 SPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIAETLASDCK---DSKRTRQTYTRYQTL 269
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 270 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 317
>gi|440910521|gb|ELR60315.1| Homeobox protein Hox-B8, partial [Bos grunniens mutus]
Length = 217
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 125 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 176
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 177 TERQVKIWFQNRRMKWKKE 195
>gi|444713455|gb|ELW54354.1| Homeobox protein Hox-A5 [Tupaia chinensis]
Length = 163
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 46 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 104
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 105 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 146
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKD 210
>gi|1086953|gb|AAB35067.1| homeobox protein [Hirudo medicinalis]
Length = 228
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
YPWM S +R RQTYSRYQTLELEKEF +N+YL+RKRRIEIAH L L
Sbjct: 95 FYPWM------SVVGPNSSQRRRGRQTYSRYQTLELEKEFQFNRYLTRKRRIEIAHCLCL 148
Query: 317 TERQIKIWFQNRRMKLKKEK 336
TERQIKIWFQNRRMK+KKEK
Sbjct: 149 TERQIKIWFQNRRMKVKKEK 168
>gi|28629677|gb|AAO43044.1| HoxD8 [Latimeria menadoensis]
Length = 223
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
++ E + ++PWM+S + G +R RQTYSR+QTLELEKEF +N YL+RKR
Sbjct: 108 EEQETSSPSQMFPWMRS--------QAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKR 159
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 160 RIEVSHSLGLTERQIKIWFQNRRMKWKKE 188
>gi|2961628|gb|AAC05784.1| homeotic protein [Pristionchus pacificus]
Length = 211
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 253 DGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
G +YPWM + S K GG KR R Y+R Q LELEKEFH+NKYL+RKRRIEI+H
Sbjct: 94 SGTPVYPWMTRVHNNGGSSK--GGEKRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEISH 151
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQ+KIWFQNRRMK KKE
Sbjct: 152 SLMLSERQVKIWFQNRRMKHKKE 174
>gi|165873663|gb|ABY67956.1| sex combs reduced hox protein [Capitella teleta]
Length = 197
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK + + NKR+R +Y+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 86 IYPWMKRMHIGHDT--SNADNKRTRTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNL 143
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 144 TERQIKIWFQNRRMKWKKE 162
>gi|213514998|ref|NP_001134844.1| Homeobox protein Hox-D4a [Salmo salar]
gi|209736512|gb|ACI69125.1| Homeobox protein Hox-D4a [Salmo salar]
Length = 256
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +R +P A + V + QQ+ + + G +YPWMK
Sbjct: 92 QPRGHVHERASHPSPFTAQTEPCPPVQVTGPRTCGQQQNTKNQHGIQAKQPTVVYPWMKK 151
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
+ + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 152 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 211
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 212 IWFQNRRMKWKKD 224
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 125 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 184
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 185 LCLSERQIKIWFQNRRMKWKKD 206
>gi|380028373|ref|XP_003697878.1| PREDICTED: uncharacterized protein LOC100865753 [Apis florea]
Length = 577
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
Y W+KS+ S TG KR+RQTY+R+QTLELEKEFHYN+YL+R RR+EIA L LT
Sbjct: 429 YSWLKSSNSKGESSNTG--QKRTRQTYTRHQTLELEKEFHYNRYLTRHRRLEIAKALSLT 486
Query: 318 ERQIKIWFQNRRMKLKKEK 336
ERQ+KIWFQNRRMK KK K
Sbjct: 487 ERQVKIWFQNRRMKAKKFK 505
>gi|332692533|gb|AEE90208.1| Homeobox D4a [Anguilla anguilla]
gi|385654530|gb|AFI62024.1| Hox-D4a [Anguilla japonica]
Length = 236
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 9/110 (8%)
Query: 235 PDVQDSC--SVSSQQDHEGEDG------ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYS 285
P VQ S + QQ+ + ++G A +YPWMK + + TG KRSR Y+
Sbjct: 95 PPVQMSAPRTCGQQQNTKSQNGIQAKQPAIVYPWMKKVHVTTVNTDYTGSEPKRSRTAYT 154
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 155 RQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 204
>gi|332692523|gb|AEE90199.1| Homeobox C6b [Anguilla anguilla]
gi|385654516|gb|AFI62012.1| Hox-C6b [Anguilla japonica]
Length = 233
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + S+ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQ--RMNSHRIGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 180 TERQIKIWFQNRRMKWKKE 198
>gi|324516905|gb|ADY46669.1| Homeobox protein lin-39 [Ascaris suum]
Length = 206
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G +YPWM + S + G KR R Y+R Q LELEKEFH+NKYL+RKRRIEIAH
Sbjct: 92 GVAVYPWMTRVHSTNGSNR---GEKRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEIAHS 148
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KKE
Sbjct: 149 LMLTERQVKIWFQNRRMKHKKE 170
>gi|4322074|gb|AAD15946.1| homeobox protein [Danio rerio]
Length = 276
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 9/101 (8%)
Query: 238 QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
Q+S + S+ ++G+ ++PWM+ + D TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|410952542|ref|XP_003982938.1| PREDICTED: homeobox protein Hox-A4 [Felis catus]
Length = 385
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 258 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 314
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 315 HTLCLSERQVKIWFQNRRMKWKKD 338
>gi|431822413|ref|NP_001012293.1| homeobox protein Hox-D4 [Gallus gallus]
Length = 237
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 210 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 263
+P G +++ P + P + +S + Q + G A +YPWMK
Sbjct: 72 QPRGHGQEQSAPPSHFPGQAEHCPPPPMSNSRACGQQPALKAPHGSAVKQPAVVYPWMKK 131
Query: 264 NQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 322
S + +GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 323 IWFQNRRMKLKKE 335
IWFQNRRMK KK+
Sbjct: 192 IWFQNRRMKWKKD 204
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|313240264|emb|CBY32609.1| unnamed protein product [Oikopleura dioica]
Length = 194
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 238 QDSCSVSSQQDHEGEDGATL--YPWMKSNQDASY-SCKTGGGNKRSRQTYSRYQTLELEK 294
QD ++ + +D +L YPWM+ A + G NKR R Y+R+QTLELEK
Sbjct: 84 QDDLGSCDSREKKSDDAKSLKIYPWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLELEK 143
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 144 EFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 184
>gi|146324918|sp|A1YGK7.1|HXA7_PANPA RecName: Full=Homeobox protein Hox-A7
gi|121484170|gb|ABM54432.1| HOXA7 [Pan paniscus]
Length = 230
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 75/127 (59%), Gaps = 13/127 (10%)
Query: 213 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNQDAS 268
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE H L LTERQI WFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEXXHALCLTERQIXXWFQNR 181
Query: 329 RMKLKKE 335
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|53749656|ref|NP_571612.2| homeobox protein Hox-B5b [Danio rerio]
gi|50417206|gb|AAH78285.1| Homeo box B5b [Danio rerio]
Length = 276
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 9/101 (8%)
Query: 238 QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
Q+S + S+ ++G+ ++PWM+ + D TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|123204462|gb|ABM73560.1| homeodomain protein [Megalobrama amblycephala]
Length = 274
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 9/101 (8%)
Query: 238 QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
Q+S + S+ ++G+ ++PWM+ + D TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|306879|gb|AAA36007.1| homeo box c8 protein [Homo sapiens]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQT 289
S QD E G T +YPWM+ S+ Y G +R RQ YSRYQT
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQT 71
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 72 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKD 210
>gi|18858851|ref|NP_571198.1| homeobox protein Hox-C6a [Danio rerio]
gi|60392438|sp|P15862.2|HXC6A_DANRE RecName: Full=Homeobox protein Hox-C6a; Short=Hox-C6; AltName:
Full=Homeobox protein Zf-61
gi|4322098|gb|AAD15958.1| homeobox protein [Danio rerio]
Length = 231
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 123 IYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 181
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 182 TERQIKIWFQNRRMKWKKE 200
>gi|395540396|ref|XP_003772141.1| PREDICTED: homeobox protein Hox-A6 [Sarcophilus harrisii]
Length = 234
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Query: 250 EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
EG D + +YPWM+ ++ G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 125 EGSDRKYTSPVYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 183
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 184 RIEIANALCLTERQIKIWFQNRRMKWKKENKLI 216
>gi|291405871|ref|XP_002719360.1| PREDICTED: homeobox B5 [Oryctolagus cuniculus]
Length = 269
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
Query: 232 VGSPDV---QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYS 285
+GSP + Q +S EG+ ++PWM+ + D TG KR+R Y+
Sbjct: 149 LGSPSLARAQPEPMATSTAAPEGQT-PQIFPWMRKLHISHD-----MTGPDGKRARTAYT 202
Query: 286 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 203 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
Length = 592
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKE 456
>gi|60392405|sp|P09013.2|HXB5B_DANRE RecName: Full=Homeobox protein Hox-B5b; AltName: Full=Homeobox
protein Zf-54; AltName: Full=Hox-B5-like
gi|22316136|emb|CAD44458.1| homeo box protein B5b [Danio rerio]
Length = 276
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 9/101 (8%)
Query: 238 QDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEK 294
Q+S + S+ ++G+ ++PWM+ + D TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|24497544|ref|NP_710160.1| homeobox protein Hox-C6 isoform 2 [Homo sapiens]
gi|426372804|ref|XP_004053306.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Gorilla gorilla
gorilla]
gi|51412|emb|CAA31023.1| unnamed protein product [Mus musculus]
gi|26341506|dbj|BAC34415.1| unnamed protein product [Mus musculus]
gi|119617152|gb|EAW96746.1| homeobox C6, isoform CRA_a [Homo sapiens]
gi|189054716|dbj|BAG37349.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQT 289
S QD E G T +YPWM+ S+ Y G +R RQ YSRYQT
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQT 71
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 72 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|51474|emb|CAA34517.1| unnamed protein product [Mus musculus]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQT 289
S QD E G T +YPWM+ S+ Y G +R RQ YSRYQT
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQT 71
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 72 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
Length = 590
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKE 456
>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
Length = 588
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 371 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 430
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 431 HALCLTERQIKIWFQNRRMKLKKE 454
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|195038659|ref|XP_001990774.1| GH18074 [Drosophila grimshawi]
gi|193894970|gb|EDV93836.1| GH18074 [Drosophila grimshawi]
Length = 529
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 309 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 368
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 369 HALCLTERQIKIWFQNRRMKLKKE 392
>gi|334349109|ref|XP_001365645.2| PREDICTED: homeobox protein Hox-A6-like [Monodelphis domestica]
Length = 232
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Query: 250 EGED---GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
EG D + +YPWM+ ++ G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 125 EGSDRKYTSPVYPWMQ-RMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 183
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKEKIVM 339
RIEIA+ L LTERQIKIWFQNRRMK KKE ++
Sbjct: 184 RIEIANALCLTERQIKIWFQNRRMKWKKENKLI 216
>gi|345316078|ref|XP_001518990.2| PREDICTED: homeobox protein Hox-C6-like, partial [Ornithorhynchus
anatinus]
Length = 260
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 164 IYPWMQ-RMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 222
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 223 TERQIKIWFQNRRMKWKKE 241
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKD 210
>gi|57164349|ref|NP_001009335.1| homeobox protein Hox-C6 [Ovis aries]
gi|338726316|ref|XP_003365299.1| PREDICTED: homeobox protein Hox-C6-like isoform 2 [Equus caballus]
gi|410964587|ref|XP_003988835.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Felis catus]
gi|1708358|sp|P49925.1|HXC6_SHEEP RecName: Full=Homeobox protein Hox-C6
gi|988252|gb|AAA75473.1| Hox C6 [Ovis aries]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 243 VSSQQDHEGEDGAT----------LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQT 289
S QD E G T +YPWM+ S+ Y G +R RQ YSRYQT
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGY----GADRRRGRQIYSRYQT 71
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 72 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
Length = 590
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKE 456
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|837347|gb|AAB33590.1| Hoxb-4 homeodomain protein [Takifugu rubripes=Japanese puffer fish,
Peptide, 251 aa]
gi|2130556|gb|AAC60205.1| homeobox protein HOXB-4 [Takifugu rubripes]
Length = 251
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 200
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 201 CLSERQIKIWFQNRRMKWKKD 221
>gi|213512948|ref|NP_001133051.1| homeobox protein HoxB8ab [Salmo salar]
gi|157816103|gb|ABV82070.1| homeobox protein HoxB8ab [Salmo salar]
gi|158702277|gb|ABW77475.1| homeobox protien HoxB8ab [Salmo salar]
Length = 246
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQLAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|307180545|gb|EFN68507.1| Homeotic protein deformed [Camponotus floridanus]
Length = 529
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 256 TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
T+YPWMK A S G KR R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 290 TIYPWMKKIHVAGVANGSYTPGMEPKRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAH 349
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 350 NLVLSERQIKIWFQNRRMKWKKD 372
>gi|220898196|gb|ACL81451.1| HoxB8 [Latimeria menadoensis]
Length = 240
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 17/107 (15%)
Query: 229 SNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
SNGVG ++ + L+PWM+ + G +R RQTYSRYQ
Sbjct: 115 SNGVGE---------EAENSEQTPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQ 157
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 158 TLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 204
>gi|70778859|ref|NP_001020526.1| homeobox protein Hox-B5 [Gallus gallus]
gi|326934077|ref|XP_003213122.1| PREDICTED: homeobox protein Hox-B5a-like [Meleagris gallopavo]
gi|57235483|gb|AAW48484.1| homeodomain transcription factor [Gallus gallus]
Length = 264
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 9/104 (8%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLE 291
P Q +S EG+ ++PWM+ + D TG KR+R Y+RYQTLE
Sbjct: 150 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLE 203
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 204 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|348517819|ref|XP_003446430.1| PREDICTED: homeobox protein Hox-B4a-like [Oreochromis niloticus]
Length = 258
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 145 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 204
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 205 CLSERQIKIWFQNRRMKWKKD 225
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|313234711|emb|CBY10664.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 238 QDSCSVSSQQDHEGEDGATL--YPWMKSNQDASY-SCKTGGGNKRSRQTYSRYQTLELEK 294
QD ++++ +D +L YPWM+ A + G NKR R Y+R+QTLELEK
Sbjct: 44 QDDLGSCDSRENKSDDAKSLKIYPWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLELEK 103
Query: 295 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
EFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 104 EFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 144
>gi|311275744|ref|XP_003134889.1| PREDICTED: homeobox protein Hox-A4-like [Sus scrofa]
Length = 329
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 200 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 256
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 257 HTLCLSERQVKIWFQNRRMKWKKD 280
>gi|155369752|ref|NP_001094494.1| homeobox B5 [Xenopus (Silurana) tropicalis]
gi|140832837|gb|AAI35706.1| hoxb5 protein [Xenopus (Silurana) tropicalis]
Length = 258
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 10/96 (10%)
Query: 245 SQQDHEGEDG--ATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 299
S G DG ++PWM+ N D TG KR+R Y+RYQTLELEKEFH+N
Sbjct: 151 SSPGAAGTDGQNPQIFPWMRKLHINHDM-----TGPDGKRARTAYTRYQTLELEKEFHFN 205
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 206 RYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 241
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|224086902|ref|XP_002187008.1| PREDICTED: homeobox protein Hox-B5a-like [Taeniopygia guttata]
Length = 265
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 9/104 (8%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLE 291
P Q +S EG+ ++PWM+ + D TG KR+R Y+RYQTLE
Sbjct: 151 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLE 204
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 248
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|344270548|ref|XP_003407106.1| PREDICTED: homeobox protein Hox-A5-like [Loxodonta africana]
Length = 267
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ + G KR+R Y+RYQTLELE
Sbjct: 153 TPASSEQASAQSEPSPAPPAQPQIYPWMRKLHIS----HGGPEGKRARTAYTRYQTLELE 208
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 209 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 250
>gi|254692756|dbj|BAH23873.2| transcription factor Hox4 [Balanoglossus misakiensis]
Length = 209
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 256 TLYPWMKSNQ--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWMK + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 96 VMYPWMKRAHIHPGVGTAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHA 155
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQ+KIWFQNRRMK KK+
Sbjct: 156 LGLTERQVKIWFQNRRMKWKKD 177
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKD 212
>gi|395830944|ref|XP_003788572.1| PREDICTED: homeobox protein Hox-A4 [Otolemur garnettii]
gi|202070726|gb|ACH95314.1| homeobox A4 (predicted) [Otolemur garnettii]
Length = 318
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 197 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 253
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 254 HTLCLSERQVKIWFQNRRMKWKKD 277
>gi|395738618|ref|XP_002818150.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4 [Pongo
abelii]
Length = 315
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 188 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 244
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 245 HTLCLSERQVKIWFQNRRMKWKKD 268
>gi|291500845|gb|ADE08353.1| homeobox C6 [Monodelphis domestica]
Length = 208
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 95 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 153
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 154 TERQIKIWFQNRRMKWKKE 172
>gi|62826028|gb|AAH94172.1| Unknown (protein for MGC:115122) [Xenopus laevis]
Length = 234
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 122 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 177
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 178 LCLTERQIKIWFQNRRMKWKKE 199
>gi|147900209|ref|NP_001081015.1| homeobox protein Hox-C6 [Xenopus laevis]
gi|123243|sp|P02832.2|HXC6_XENLA RecName: Full=Homeobox protein Hox-C6; AltName: Full=AC1; AltName:
Full=XlHbox-1
gi|64744|emb|CAA31021.1| unnamed protein product [Xenopus laevis]
gi|54038055|gb|AAH84319.1| XlHbox1 protein [Xenopus laevis]
Length = 234
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQ-RMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 181 TERQIKIWFQNRRMKWKKE 199
>gi|59939333|gb|AAX12425.1| Dbuz\abd-A-PB [Drosophila buzzatii]
Length = 536
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 316 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 375
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 376 HALCLTERQIKIWFQNRRMKLKKE 399
>gi|410934529|gb|AFV93981.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 116
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++S TG NKR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 6 MYPWMRKIH-LNHSAGTGD-NKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 63
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 64 TERQIKIWFQNRRMKWKKE 82
>gi|281182584|ref|NP_001162367.1| homeobox protein Hox-A4 [Papio anubis]
gi|160904218|gb|ABX52202.1| homeobox A4 (predicted) [Papio anubis]
Length = 320
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 193 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 249
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 250 HTLCLSERQVKIWFQNRRMKWKKD 273
>gi|170649677|gb|ACB21262.1| homeobox A4 (predicted) [Callicebus moloch]
Length = 324
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 197 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 253
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 254 HTLCLSERQVKIWFQNRRMKWKKD 277
>gi|410901717|ref|XP_003964342.1| PREDICTED: homeobox protein Hox-B4a-like [Takifugu rubripes]
Length = 297
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 73/114 (64%), Gaps = 14/114 (12%)
Query: 223 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKS-NQDASYSCKTGGGNKRSR 281
G S G SP S+++D +YPWMK + + S TGG KRSR
Sbjct: 151 CGQTPHSQGASSP-------ASTRKD------PVVYPWMKKVHVNIVSSNYTGGEPKRSR 197
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 198 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 251
>gi|312384141|gb|EFR28940.1| hypothetical protein AND_02489 [Anopheles darlingi]
Length = 322
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 243 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 300
>gi|332692525|gb|AEE90201.1| Homeobox C4b [Anguilla anguilla]
Length = 272
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 15/107 (14%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQ 288
+P++ +S +VS++Q +YPWMK S +ASY+ G KRSR Y+R Q
Sbjct: 118 AAPELPNS-TVSAKQ-------PVVYPWMKKIHVSTVNASYN---GAEPKRSRTAYTRQQ 166
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 167 VLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKD 213
>gi|429510502|gb|AFZ94989.1| transcription factor Hox4 [Petromyzon marinus]
Length = 271
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +Y TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 163 VVYPWMKKIHVSTVNPNY---TGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 219
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KK+
Sbjct: 220 HALCLTERQIKIWFQNRRMKWKKD 243
>gi|291391792|ref|XP_002712253.1| PREDICTED: homeobox D8-like [Oryctolagus cuniculus]
Length = 491
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 12/104 (11%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ G +R RQTYSR+QTLE
Sbjct: 362 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAP---------GRRRGRQTYSRFQTLE 412
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 413 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 456
>gi|344270550|ref|XP_003407107.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4-like
[Loxodonta africana]
Length = 326
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + A S GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 197 VVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 256
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQ+KIWFQNRRMK KK+
Sbjct: 257 CLSERQVKIWFQNRRMKWKKD 277
>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
Length = 596
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 375 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 434
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 435 HALCLTERQIKIWFQNRRMKLKKE 458
>gi|18150505|gb|AAL61642.1|AF434666_1 Hox4w [Petromyzon marinus]
Length = 271
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +Y TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 163 VVYPWMKKIHVSTVNPNY---TGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 219
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMK KK+
Sbjct: 220 HALCLTERQIKIWFQNRRMKWKKD 243
>gi|397327507|gb|AFO42769.1| HOXD8 [Polyodon spathula]
Length = 245
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 235 PDVQDSCSVSSQQDH---EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S S + ++ + + ++PWM+ + S G +R RQTY+R+QTLE
Sbjct: 108 PDCKSSSSNTGEEPEHLNQNSSPSQMFPWMRPQGCSCVSFVIAPGRRRGRQTYTRFQTLE 167
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEK F +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 168 LEKGFIFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 211
>gi|158290042|ref|XP_311627.4| AGAP004662-PA [Anopheles gambiae str. PEST]
gi|74764409|sp|O76762.1|ABDA_ANOGA RecName: Full=Homeobox protein abdominal-A homolog
gi|3420838|gb|AAC31946.1| abdominal-A homeotic protein [Anopheles gambiae]
gi|157018341|gb|EAA07261.6| AGAP004662-PA [Anopheles gambiae str. PEST]
Length = 308
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 23/127 (18%)
Query: 230 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS--------------------- 268
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 72 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 129
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 130 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 189
Query: 329 RMKLKKE 335
RMKLKKE
Sbjct: 190 RMKLKKE 196
>gi|226822849|gb|ACO83084.1| homeobox A5 (predicted) [Dasypus novemcinctus]
Length = 270
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|193952|gb|AAA20072.1| homeobox protein [Mus musculus]
Length = 248
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK + +++ TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 127 AVVYPWMKKVHVNSANPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 186
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 187 LCLSERQIKIWFQNRRMKWKKD 208
>gi|53733782|gb|AAH83307.1| Hoxc6a protein [Danio rerio]
gi|197247195|gb|AAI65049.1| Hoxc6a protein [Danio rerio]
Length = 223
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 100 IYPWMQRMNSHSGVGY----GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 155
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 156 LCLTERQIKIWFQNRRMKWKKE 177
>gi|241756306|ref|XP_002406404.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506141|gb|EEC15635.1| fushi tarazu, putative [Ixodes scapularis]
Length = 110
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 265 QDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 324
Q + + G KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIW
Sbjct: 3 QHLHFLADSAQGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIW 62
Query: 325 FQNRRMKLKKE 335
FQNRRMK KKE
Sbjct: 63 FQNRRMKAKKE 73
>gi|62526079|dbj|BAD95556.1| Hoxb-5 [Gallus gallus]
Length = 257
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 9/104 (8%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLE 291
P Q +S EG+ ++PWM+ + D TG KR+R Y+RYQTLE
Sbjct: 150 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLE 203
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 204 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|3420830|gb|AAC31942.1| Ultrabithorax homeotic protein IIa [Anopheles gambiae]
Length = 327
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 10/94 (10%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 301
+++ ++ E G L W+ +N G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 211 AIAGKRYSESLAGTLLPDWIGAN----------GLRRRGRQTYTRYQTLELEKEFHTNHY 260
Query: 302 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 261 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 294
>gi|195394383|ref|XP_002055823.1| abd-A [Drosophila virilis]
gi|194142532|gb|EDW58935.1| abd-A [Drosophila virilis]
Length = 522
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 299 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 358
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 359 HALCLTERQIKIWFQNRRMKLKKE 382
>gi|410262402|gb|JAA19167.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 231 LCLTERQIKIWFQNRRMKWKKD 252
>gi|431894935|gb|ELK04728.1| Homeobox protein Hox-D4 [Pteropus alecto]
Length = 253
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKD 210
>gi|195107232|ref|XP_001998219.1| GI23753 [Drosophila mojavensis]
gi|193914813|gb|EDW13680.1| GI23753 [Drosophila mojavensis]
Length = 529
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 309 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 368
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 369 HALCLTERQIKIWFQNRRMKLKKE 392
>gi|348522889|ref|XP_003448956.1| PREDICTED: homeobox protein Hox-A7-like [Oreochromis niloticus]
Length = 224
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+++ KR RQTYSR+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 115 MYPWMRASDP---------NRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCL 165
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 166 SERQIKIWFQNRRMKWKKD 184
>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
Length = 562
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 349 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 408
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 409 HALCLTERQIKIWFQNRRMKLKKE 432
>gi|385654518|gb|AFI62014.1| Hox-C4b [Anguilla japonica]
Length = 272
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 15/107 (14%)
Query: 233 GSPDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQ 288
+P++ +S +VS++Q +YPWMK S +ASY+ G KRSR Y+R Q
Sbjct: 118 AAPELPNS-TVSAKQ-------PVVYPWMKKIHVSTVNASYN---GAEPKRSRTAYTRQQ 166
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 167 VLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKD 213
>gi|347972379|ref|XP_003436887.1| AGAP004662-PC [Anopheles gambiae str. PEST]
gi|333467597|gb|EGK96615.1| AGAP004662-PC [Anopheles gambiae str. PEST]
Length = 307
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 23/127 (18%)
Query: 230 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDAS--------------------- 268
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 71 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 128
Query: 269 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 328
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 129 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 188
Query: 329 RMKLKKE 335
RMKLKKE
Sbjct: 189 RMKLKKE 195
>gi|213982843|ref|NP_001135589.1| homeobox D8 [Xenopus (Silurana) tropicalis]
gi|195540199|gb|AAI68107.1| Unknown (protein for MGC:186068) [Xenopus (Silurana) tropicalis]
Length = 231
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 11/111 (9%)
Query: 228 DSNGVGSPDVQD-SCSVSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTY 284
++ V PD + S S+ + +H + + ++PWM++ + G +R RQTY
Sbjct: 95 EAEPVQYPDCKSPSASIGADPEHLHQNSPASHMFPWMRA--------QVAPGRRRGRQTY 146
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 147 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 197
>gi|426432569|gb|ADO33070.2| ultrabithorax [Biston betularia]
Length = 254
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 146 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 198
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 199 LTERQIKIWFQNRRMKLKKE 218
>gi|390178471|ref|XP_003736654.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859456|gb|EIM52727.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 63/91 (69%), Gaps = 12/91 (13%)
Query: 256 TLYPWMKSNQDASYS-----------CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
T YPWM + YS T G +R RQTY+RYQTLELEKEFH N YL+R
Sbjct: 242 TFYPWM-AIAGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTR 300
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 301 RRRIEMAHALCLTERQIKIWFQNRRMKLKKE 331
>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
Length = 560
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 347 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 406
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 407 HALCLTERQIKIWFQNRRMKLKKE 430
>gi|24647523|ref|NP_732172.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|23171494|gb|AAN13718.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|33636523|gb|AAQ23559.1| RE43738p [Drosophila melanogaster]
gi|220945946|gb|ACL85516.1| Ubx-PE [synthetic construct]
gi|220955710|gb|ACL90398.1| Ubx-PE [synthetic construct]
Length = 380
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 269 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 318
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 319 MAHALCLTERQIKIWFQNRRMKLKKE 344
>gi|194900579|ref|XP_001979833.1| GG16812 [Drosophila erecta]
gi|190651536|gb|EDV48791.1| GG16812 [Drosophila erecta]
Length = 381
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 270 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 319
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 320 MAHALCLTERQIKIWFQNRRMKLKKE 345
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKD 210
>gi|969090|gb|AAA84408.1| UBXIA [Drosophila melanogaster]
Length = 380
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 269 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 318
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 319 MAHALCLTERQIKIWFQNRRMKLKKE 344
>gi|385654481|gb|AFI61982.1| Hox-B4a [Anguilla japonica]
Length = 243
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + + TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 125 VVYPWMKKVHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 184
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 185 CLSERQIKIWFQNRRMKWKKD 205
>gi|311272691|ref|XP_003133546.1| PREDICTED: homeobox protein Hox-D4-like [Sus scrofa]
Length = 257
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|6754232|ref|NP_034583.1| homeobox protein Hox-A5 [Mus musculus]
gi|392339939|ref|XP_003753945.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347316|ref|XP_003749797.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347328|ref|XP_003749803.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|392356115|ref|XP_003752228.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|123226|sp|P09021.1|HXA5_MOUSE RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3; AltName: Full=Homeobox protein M2
gi|51372|emb|CAA68364.1| homeo domain protein [Mus musculus]
gi|51471|emb|CAA34738.1| unnamed protein product [Mus musculus]
gi|193917|gb|AAA37838.1| homeobox 1.3 protein [Mus musculus]
gi|309314|gb|AAA37837.1| homeo domain protein [Mus musculus]
gi|148666242|gb|EDK98658.1| homeobox A5 [Mus musculus]
gi|149033363|gb|EDL88164.1| rCG52336 [Rattus norvegicus]
Length = 270
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|350405524|ref|XP_003487462.1| PREDICTED: hypothetical protein LOC100747520 [Bombus impatiens]
Length = 422
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 59/70 (84%), Gaps = 4/70 (5%)
Query: 270 SCKTGGGN----KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWF 325
SC G GN KR+RQTY+R+QTLELEKEFHYN+YL+R+RRIEI+ L LTERQIKIWF
Sbjct: 250 SCAQGDGNNVGQKRTRQTYTRFQTLELEKEFHYNRYLTRRRRIEISKALSLTERQIKIWF 309
Query: 326 QNRRMKLKKE 335
QNRRMK KK+
Sbjct: 310 QNRRMKAKKD 319
>gi|198453478|ref|XP_001359215.2| Dfd [Drosophila pseudoobscura pseudoobscura]
gi|198132373|gb|EAL28360.2| Dfd [Drosophila pseudoobscura pseudoobscura]
Length = 604
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 430
>gi|195152073|ref|XP_002016961.1| GL22041 [Drosophila persimilis]
gi|194112018|gb|EDW34061.1| GL22041 [Drosophila persimilis]
Length = 602
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 430
>gi|158296358|ref|XP_001688962.1| AGAP004646-PA [Anopheles gambiae str. PEST]
gi|157015341|gb|EDO63636.1| AGAP004646-PA [Anopheles gambiae str. PEST]
Length = 577
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Query: 249 HEGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
H DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R
Sbjct: 316 HATSDGERIIYPWMKKIHVAGVANGSFQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTR 375
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 376 RRRIEIAHTLVLSERQIKIWFQNRRMKWKKD 406
>gi|151935659|gb|ABS18811.1| Hox4 [Flaccisagitta enflata]
Length = 288
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 249 HEGEDGA-TLYPWMKSNQDA-SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
H G A +YPWMK A S G KR+R Y+R+Q LELEKEFH+N+YL+R+R
Sbjct: 100 HNGNGQAPVIYPWMKKVHVATSNGTNFAGEPKRARTAYTRHQVLELEKEFHFNRYLTRRR 159
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 160 RIEIAHALCLTERQIKIWFQNRRMKWKKD 188
>gi|344249136|gb|EGW05240.1| Homeobox protein Hox-B8 [Cricetulus griseus]
Length = 156
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 46 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 97
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 98 TERQVKIWFQNRRMKWKKE 116
>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
Length = 582
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 360 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 419
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 420 HALCLTERQIKIWFQNRRMKLKKE 443
>gi|348522805|ref|XP_003448914.1| PREDICTED: homeobox protein Hox-A5-like [Oreochromis niloticus]
Length = 281
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ + D S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHISHDLS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|195500193|ref|XP_002097268.1| GE26131 [Drosophila yakuba]
gi|194183369|gb|EDW96980.1| GE26131 [Drosophila yakuba]
Length = 381
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 270 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 319
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 320 MAHALCLTERQIKIWFQNRRMKLKKE 345
>gi|15029697|gb|AAH11063.1| Homeo box A5 [Mus musculus]
Length = 270
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|402899507|ref|XP_003912736.1| PREDICTED: homeobox protein Hox-B8 [Papio anubis]
Length = 293
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 185 TERQVKIWFQNRRMKWKKE 203
>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
Length = 631
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 414 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 473
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 474 HALCLTERQIKIWFQNRRMKLKKE 497
>gi|154183830|gb|ABS70770.1| Hoxa5a [Haplochromis burtoni]
Length = 281
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ + D S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHISHDLS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|17985969|ref|NP_536752.1| ultrabithorax, isoform A [Drosophila melanogaster]
gi|48428932|sp|P83949.1|UBX_DROME RecName: Full=Homeotic protein ultrabithorax
gi|48428933|sp|P83950.1|UBX_DROSI RecName: Full=Homeotic protein ultrabithorax
gi|433477|emb|CAA53803.1| homeotic ultrabithorax protein [Drosophila melanogaster]
gi|829190|emb|CAA29194.1| Ultrabithorax gene product [Drosophila melanogaster]
gi|4323521|gb|AAD16402.1| Ultrabithorax [Drosophila simulans]
gi|10726569|gb|AAF55355.2| ultrabithorax, isoform A [Drosophila melanogaster]
Length = 389
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 10/82 (12%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 282 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 331
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMKLKKE
Sbjct: 332 LCLTERQIKIWFQNRRMKLKKE 353
>gi|209489449|gb|ACI49209.1| hypothetical protein Csp3_JD04.008 [Caenorhabditis angaria]
Length = 191
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 4/79 (5%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK S GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L L
Sbjct: 97 VFPWMKMGG----SGTKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISESLHL 152
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 153 TERQVKIWFQNRRMKHKKE 171
>gi|440899269|gb|ELR50598.1| Homeobox protein Hox-A5 [Bos grunniens mutus]
Length = 190
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 73 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 131
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 132 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 173
>gi|432865300|ref|XP_004070515.1| PREDICTED: homeobox protein Hox-C6a-like [Oryzias latipes]
Length = 234
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 121 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 176
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 177 LCLTERQIKIWFQNRRMKWKKE 198
>gi|410899256|ref|XP_003963113.1| PREDICTED: homeobox protein Hox-C6a-like [Takifugu rubripes]
gi|82227628|sp|O42504.1|HXC6A_FUGRU RecName: Full=Homeobox protein Hox-C6a; AltName: Full=FrHOXC-6
gi|2341089|gb|AAB68682.1| homeobox protein HOXC-6 [Takifugu rubripes]
gi|94482830|gb|ABF22446.1| homeobox protein HoxC6a [Takifugu rubripes]
Length = 236
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 121 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 176
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 177 LCLTERQIKIWFQNRRMKWKKE 198
>gi|109944947|dbj|BAE97003.1| Antennapedia [Porcellio scaber]
Length = 258
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 10/79 (12%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 190 SSPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 239
Query: 314 LQLTERQIKIWFQNRRMKL 332
L LTERQIKIWFQNRRMK
Sbjct: 240 LCLTERQIKIWFQNRRMKC 258
>gi|42734369|ref|NP_571195.1| homeobox protein Hox-B8a [Danio rerio]
gi|60392412|sp|Q8AWZ0.1|HXB8A_DANRE RecName: Full=Homeobox protein Hox-B8a; Short=Hox-B8
gi|26984634|emb|CAD59111.1| SI:dZ254O17.1 (homeo box protein B8a) [Danio rerio]
gi|31419284|gb|AAH53287.1| Homeo box B8a [Danio rerio]
Length = 245
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 185 TERQVKIWFQNRRMKWKKE 203
>gi|225581120|gb|ACN94691.1| GA15291 [Drosophila miranda]
Length = 607
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 430
>gi|49457548|emb|CAG47073.1| HOXA5 [Homo sapiens]
Length = 270
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNHYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|348521442|ref|XP_003448235.1| PREDICTED: homeobox protein Hox-C6a-like [Oreochromis niloticus]
Length = 234
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 121 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 176
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 177 LCLTERQIKIWFQNRRMKWKKE 198
>gi|4760772|dbj|BAA77405.1| PLOX5-Dj [Dugesia japonica]
Length = 288
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
Y WM N ++ NKR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 169 FYSWM--NPKSNTDNPNNSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLIL 226
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 227 TERQIKIWFQNRRMKWKKE 245
>gi|2708303|gb|AAB92412.1| ultrabithorax [Acanthokara kaputensis]
Length = 214
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Query: 247 QDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
Q + + YPWM + + G KR RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 111 QVNPSSETTPFYPWM------NVAGANGLQRKRGRQTYTRYQTLELEKEFHTNHYLTRRR 164
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RIE+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 165 RIEMAHALCLTERQIKIWFQNRRMKLKKE 193
>gi|24647525|ref|NP_732173.1| ultrabithorax, isoform C [Drosophila melanogaster]
gi|23171495|gb|AAN13719.1| ultrabithorax, isoform C [Drosophila melanogaster]
Length = 372
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 10/82 (12%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 265 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 314
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMKLKKE
Sbjct: 315 LCLTERQIKIWFQNRRMKLKKE 336
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQT 289
+P + S S+ +YPWM+ S+ + SY+ GG KRSR Y+R Q
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHVNPSYN---GGEPKRSRTAYTRQQV 209
Query: 290 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 210 LELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 255
>gi|395826614|ref|XP_003786512.1| PREDICTED: homeobox protein Hox-B4 [Otolemur garnettii]
Length = 251
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|45382501|ref|NP_990242.1| homeobox B8 [Gallus gallus]
gi|4099016|gb|AAD09228.1| Hoxb-8 [Gallus gallus]
Length = 241
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 184 TERQVKIWFQNRRMKWKKE 202
>gi|47216999|emb|CAG01627.1| unnamed protein product [Tetraodon nigroviridis]
Length = 317
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 224 IFPWMR-KLHISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 281
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 282 TERQIKIWFQNRRMKWKKD 300
>gi|119615129|gb|EAW94723.1| homeobox B8, isoform CRA_a [Homo sapiens]
gi|431890745|gb|ELK01624.1| Homeobox protein Hox-B8 [Pteropus alecto]
Length = 242
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 185 TERQVKIWFQNRRMKWKKE 203
>gi|969087|gb|AAA84411.1| UBXIIB [Drosophila melanogaster]
Length = 372
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 261 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 310
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 311 MAHALCLTERQIKIWFQNRRMKLKKE 336
>gi|969086|gb|AAA84412.1| UBXIB [Drosophila melanogaster]
Length = 389
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 10/82 (12%)
Query: 254 GATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 282 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 331
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMKLKKE
Sbjct: 332 LCLTERQIKIWFQNRRMKLKKE 353
>gi|114612533|ref|XP_001162640.1| PREDICTED: homeobox protein Hox-A4 [Pan troglodytes]
Length = 320
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 193 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 249
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 250 HTLCLSERQVKIWFQNRRMKWKKD 273
>gi|74188415|dbj|BAE25847.1| unnamed protein product [Mus musculus]
Length = 262
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 168 IYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 226
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 227 SERQIKIWFQNRRMKWKKD 245
>gi|400180339|gb|AFP73306.1| Hoxa5beta [Polyodon spathula]
Length = 270
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQ+LELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 178 IYPWMR-KLHTSHDFMAGPEGKRARTAYTRYQSLELEKEFHFNRYLTRRRRIEIAHALCL 236
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 237 SERQIKIWFQNRRMKWKKD 255
>gi|354479686|ref|XP_003502040.1| PREDICTED: homeobox protein Hox-A5-like [Cricetulus griseus]
Length = 169
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ G KR+R Y+RYQTLELE
Sbjct: 52 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELE 110
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 111 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 152
>gi|296209385|ref|XP_002751516.1| PREDICTED: uncharacterized protein LOC100410715 [Callithrix
jacchus]
Length = 716
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 589 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 645
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 646 HTLCLSERQVKIWFQNRRMKWKKD 669
>gi|195344069|ref|XP_002038613.1| GM10914 [Drosophila sechellia]
gi|194133634|gb|EDW55150.1| GM10914 [Drosophila sechellia]
Length = 582
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|449277035|gb|EMC85342.1| Homeobox protein Hox-B8 [Columba livia]
Length = 241
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 184 TERQVKIWFQNRRMKWKKE 202
>gi|14916601|sp|Q9PWD3.1|HXA5_MORSA RecName: Full=Homeobox protein Hox-A5
gi|5669604|gb|AAD46398.1|AF089743_4 homeodomain protein Hox-A5 [Morone saxatilis]
Length = 281
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ N D + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHINHDLA-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|195446494|ref|XP_002070806.1| GK12253 [Drosophila willistoni]
gi|194166891|gb|EDW81792.1| GK12253 [Drosophila willistoni]
Length = 599
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 344 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 403
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 404 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 433
>gi|195038421|ref|XP_001990656.1| GH19479 [Drosophila grimshawi]
gi|193894852|gb|EDV93718.1| GH19479 [Drosophila grimshawi]
Length = 599
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 331 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 390
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 391 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 420
>gi|194899141|ref|XP_001979121.1| GG13676 [Drosophila erecta]
gi|190650824|gb|EDV48079.1| GG13676 [Drosophila erecta]
Length = 579
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|184289|gb|AAA58664.1| Hox 1.4 [Homo sapiens]
Length = 320
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 193 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 249
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 250 HTLCLSERQVKIWFQNRRMKWKKD 273
>gi|410901647|ref|XP_003964307.1| PREDICTED: homeobox protein Hox-B5a-like [Takifugu rubripes]
gi|119370785|sp|Q1KKX9.1|HXB5A_FUGRU RecName: Full=Homeobox protein Hox-B5a
gi|94482797|gb|ABF22415.1| homeobox protein HoxB5a [Takifugu rubripes]
Length = 319
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 226 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 280
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 281 LCLTERQIKIWFQNRRMKWKKD 302
>gi|7837|emb|CAA28782.1| unnamed protein product [Drosophila melanogaster]
Length = 590
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|208966492|dbj|BAG73260.1| homeobox A4 [synthetic construct]
Length = 320
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 193 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 249
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 250 HTLCLSERQVKIWFQNRRMKWKKD 273
>gi|405109810|emb|CCH51007.1| ultrabithorax, partial [Phalangium opilio]
Length = 219
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
YPWM + + G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 92 AFYPWMA----IAGLFRANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 147
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 148 LTERQIKIWFQNRRMKLKKE 167
>gi|115499494|gb|ABI98820.1| HOX-A5 [Dicentrarchus labrax]
Length = 281
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ N D + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHINHDLA-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|268575336|ref|XP_002642647.1| C. briggsae CBR-MAB-5 protein [Caenorhabditis briggsae]
gi|9837166|gb|AAG00457.1|AF277989_1 MAB-5 [Caenorhabditis briggsae]
Length = 202
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 20/123 (16%)
Query: 216 MDRNGNPVG---LRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK 272
MD + NP L+A S G + + S + SQ ++PWMK
Sbjct: 72 MDNSTNPFAYNPLQATSANFG--ETRTSMATISQ---------PVFPWMK------MGGT 114
Query: 273 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 332
GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L LTERQ+KIWFQNRRMK
Sbjct: 115 KGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKH 174
Query: 333 KKE 335
KKE
Sbjct: 175 KKE 177
>gi|17137270|ref|NP_477201.1| deformed [Drosophila melanogaster]
gi|68067431|sp|P07548.2|DFD_DROME RecName: Full=Homeotic protein deformed
gi|4389426|gb|AAD19796.1| homeodomain protein [Drosophila melanogaster]
gi|23170614|gb|AAF54083.2| deformed [Drosophila melanogaster]
Length = 586
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|14916585|sp|Q9IA12.1|HXD8_HETFR RecName: Full=Homeobox protein Hox-D8
gi|7271820|gb|AAF44632.1|AF224263_2 HoxD8 [Heterodontus francisci]
Length = 240
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 11/111 (9%)
Query: 228 DSNGVGSPDVQDSCS-VSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTY 284
+++ V PD + S S + + +H ++ + ++PWM+ + G +R RQTY
Sbjct: 103 EADLVQYPDCKSSSSNIGEEPEHLNQNSSPTQMFPWMRP--------QAAPGRRRGRQTY 154
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 155 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 205
>gi|195451417|ref|XP_002072909.1| GK13855 [Drosophila willistoni]
gi|194168994|gb|EDW83895.1| GK13855 [Drosophila willistoni]
Length = 384
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 272 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 321
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 322 MAHALCLTERQIKIWFQNRRMKLKKE 347
>gi|449277038|gb|EMC85345.1| Homeobox protein Hox-B5a [Columba livia]
Length = 265
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 9/104 (8%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLE 291
P Q +S EG+ ++PWM+ + D TG KR+R Y+RYQTLE
Sbjct: 151 PRAQAEPIATSTAAPEGQ-APQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLE 204
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 248
>gi|348585693|ref|XP_003478605.1| PREDICTED: homeobox protein Hox-D4-like [Cavia porcellus]
Length = 254
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 130 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 189
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 190 LCLSERQIKIWFQNRRMKWKKD 211
>gi|440899270|gb|ELR50599.1| Homeobox protein Hox-A4, partial [Bos grunniens mutus]
Length = 170
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 10/114 (8%)
Query: 229 SNGVGSPDVQDSCSVS-SQQDHEGEDG--ATLYPWMK----SNQDASYSCKTGGGNKRSR 281
+ GV S +C + + + G G +YPWMK S + SY+ GG KRSR
Sbjct: 13 TPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMKKIHVSAVNPSYN---GGEPKRSR 69
Query: 282 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 70 TAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 123
>gi|426228408|ref|XP_004008301.1| PREDICTED: homeobox protein Hox-A4 [Ovis aries]
Length = 218
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 76/115 (66%), Gaps = 12/115 (10%)
Query: 229 SNGVGSPDVQDSCSV----SSQQDHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRS 280
+ GV S +C + S +G++ +YPWMK S + SY+ GG KRS
Sbjct: 61 TPGVPSGGSAPACPLLLADKSPPGLKGKE-PVVYPWMKKIHVSAVNPSYN---GGEPKRS 116
Query: 281 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 117 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 171
>gi|195498922|ref|XP_002096730.1| GE24883 [Drosophila yakuba]
gi|194182831|gb|EDW96442.1| GE24883 [Drosophila yakuba]
Length = 588
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 340 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 399
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 400 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 429
>gi|167427227|gb|ABZ80208.1| homeobox A4 (predicted) [Callithrix jacchus]
Length = 322
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 195 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 251
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 252 HTLCLSERQVKIWFQNRRMKWKKD 275
>gi|155371905|ref|NP_001094557.1| homeobox protein Hox-D4 [Bos taurus]
gi|154425967|gb|AAI51500.1| HOXD4 protein [Bos taurus]
gi|296490701|tpg|DAA32814.1| TPA: homeobox D4 [Bos taurus]
Length = 258
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 134 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 193
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 194 LCLSERQIKIWFQNRRMKWKKD 215
>gi|213514446|ref|NP_001133033.1| homeobox protein HoxA7aa [Salmo salar]
gi|157816041|gb|ABV82039.1| homeobox protein HoxA7aa [Salmo salar]
gi|158702220|gb|ABW77441.1| homeobox protein HoxA7aa [Salmo salar]
Length = 247
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWMK++ KR RQTYSRYQTLE+EKEFH+N+YL+R+RR+EIA L L
Sbjct: 113 MYPWMKTSDP---------NRKRGRQTYSRYQTLEMEKEFHFNRYLTRRRRVEIAQVLCL 163
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 164 TERQIKIWFQNRRMKWKKD 182
>gi|268575256|ref|XP_002642607.1| C. briggsae CBR-LIN-39 protein [Caenorhabditis briggsae]
gi|9837164|gb|AAG00456.1|AF277988_1 LIN-39 [Caenorhabditis briggsae]
Length = 253
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYN 299
+S D + G +YPWM TGG G KR R Y+R Q LELEKEFH +
Sbjct: 133 GISGDDDDMEKGGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTH 187
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KYL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 188 KYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223
>gi|255742464|gb|ACU32577.1| homeobox protein HoxC6 [Callorhinchus milii]
Length = 219
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRVNSHS-GVGYGPDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 181 TERQIKIWFQNRRMKWKKE 199
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 352 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 407
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 408 LCLTERQIKIWFQNRRMKWKKE 429
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 276 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 185 GRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKE 244
>gi|148613882|ref|NP_002132.3| homeobox protein Hox-A4 [Homo sapiens]
gi|116242514|sp|Q00056.3|HXA4_HUMAN RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein Hox-1D
gi|51094980|gb|EAL24224.1| homeo box A4 [Homo sapiens]
gi|119614278|gb|EAW93872.1| homeobox A4 [Homo sapiens]
gi|182887795|gb|AAI60036.1| Homeobox A4 [synthetic construct]
Length = 320
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 193 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 249
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 250 HTLCLSERQVKIWFQNRRMKWKKD 273
>gi|194742024|ref|XP_001953507.1| GF17792 [Drosophila ananassae]
gi|190626544|gb|EDV42068.1| GF17792 [Drosophila ananassae]
Length = 582
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 336 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 395
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 396 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 425
>gi|195568821|ref|XP_002102412.1| GD19895 [Drosophila simulans]
gi|194198339|gb|EDX11915.1| GD19895 [Drosophila simulans]
Length = 582
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|390463618|ref|XP_002748584.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4 [Callithrix
jacchus]
Length = 253
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|341900549|gb|EGT56484.1| CBN-LIN-39 protein [Caenorhabditis brenneri]
Length = 252
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYN 299
+S D + G +YPWM TGG G KR R Y+R Q LELEKEFH +
Sbjct: 132 GISGDDDDMDKSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTH 186
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KYL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 187 KYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 222
>gi|225507|prf||1305251A Deformed gene
Length = 590
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
>gi|359321212|ref|XP_539486.3| PREDICTED: homeobox protein Hox-A4 [Canis lupus familiaris]
Length = 317
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 190 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 246
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 247 HTLCLSERQVKIWFQNRRMKWKKD 270
>gi|195110421|ref|XP_001999778.1| GI24717 [Drosophila mojavensis]
gi|193916372|gb|EDW15239.1| GI24717 [Drosophila mojavensis]
Length = 592
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 250 EGEDGA-TLYPWMKSNQDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
E DG +YPWMK A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 326 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 385
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 386 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 415
>gi|213510894|ref|NP_001135139.1| homeobox protein HoxC6ba [Salmo salar]
gi|157815980|gb|ABV82009.1| homeobox protein HoxC6ba [Salmo salar]
gi|158702348|gb|ABW77537.1| homeobox protein HoxC6ba [Salmo salar]
Length = 232
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 122 IFPWMQRMNSHSGVGY----GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 177
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 178 LCLTERQIKIWFQNRRMKWKKE 199
>gi|154183818|gb|ABS70759.1| Hoxc6a [Haplochromis burtoni]
Length = 234
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQ-RMNSHGGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 180 TERQIKIWFQNRRMKWKKE 198
>gi|34398401|gb|AAQ67269.1| ultrabithorax [Drosophila virilis]
Length = 387
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 275 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 324
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 325 MAHALCLTERQIKIWFQNRRMKLKKE 350
>gi|220898205|gb|ACL81459.1| HoxC4 [Latimeria menadoensis]
Length = 260
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 113/219 (51%), Gaps = 26/219 (11%)
Query: 134 SFDKDAKYFDK--DPAKYY--DNFLNHNAMNY---NQMNAFNQFHMKLNPNHTDYLRTNS 186
S+ D+ Y D P + Y +N++ ++ Y + + F H +L P R N
Sbjct: 3 SYLMDSNYIDPKFPPCEEYSQNNYIPEHSPEYYSRTRDSGFQHHHQELYPP-----RPNY 57
Query: 187 DKETLNATNFV-PKDEAISEMVDGKP------PGFNMDRNGNPVGLRADSNGVGSPDVQD 239
+ N T+ P ++ + G+P P + P+ +++ P
Sbjct: 58 PERQFNCTSIQGPGNQVAHQRGHGQPQAGHHLPEKPLLIEQPPISTPSNTTSPAPP---- 113
Query: 240 SCSV--SSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEF 296
SC+ + Q ++ +YPWMK ++ + GG KRSR Y+R Q LELEKEF
Sbjct: 114 SCNQPNTEQPNNTTSKQPVVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEF 173
Query: 297 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
HYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 174 HYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 212
>gi|158702240|gb|ABW77451.1| homeobox protein HoxA7ab [Salmo salar]
Length = 253
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+++ KR RQTY RYQTLELEKEFH+N+YL+R+RR+EIAH L L
Sbjct: 116 MYPWMRTSDP---------NRKRGRQTYPRYQTLELEKEFHFNRYLNRRRRVEIAHVLCL 166
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KK+
Sbjct: 167 TERQIKIWFQNRRMKWKKD 185
>gi|74267509|dbj|BAE44253.1| hoxA5a [Oryzias latipes]
gi|83016929|dbj|BAE53461.1| hoxA5a [Oryzias latipes]
Length = 279
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ + D S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 185 IYPWMRKLHISHDIS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 239
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 240 LCLSERQIKIWFQNRRMKWKKD 261
>gi|255742475|gb|ACU32587.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 239
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 11/111 (9%)
Query: 228 DSNGVGSPDVQDSCS-VSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTY 284
+++ V PD + S S + + +H ++ + ++PWM+ + G +R RQTY
Sbjct: 103 EADLVQYPDCKSSSSNIGEEPEHLNQNSSPTQMFPWMRP--------QAAPGRRRGRQTY 154
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 155 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 205
>gi|449491432|ref|XP_002187352.2| PREDICTED: homeobox protein Hox-B8 [Taeniopygia guttata]
Length = 241
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 184 TERQVKIWFQNRRMKWKKE 202
>gi|426238968|ref|XP_004013408.1| PREDICTED: homeobox protein Hox-B8 [Ovis aries]
Length = 142
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 33 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 84
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 85 TERQVKIWFQNRRMKWKKE 103
>gi|222530736|emb|CAU83356.1| deformed [Parasteatoda tepidariorum]
Length = 289
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 248 DHEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
D G D +YPWM+ +N G KR R Y+R+Q LELEKEFH+N+YL+R
Sbjct: 124 DCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFNRYLTR 183
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 184 RRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
>gi|344268347|ref|XP_003406022.1| PREDICTED: homeobox protein Hox-D8-like [Loxodonta africana]
Length = 427
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ G +R RQTYSR+QTLE
Sbjct: 297 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQATP--------GRRRGRQTYSRFQTLE 348
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 349 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 392
>gi|284005063|ref|NP_001164871.1| homeobox protein Hox-A4 [Oryctolagus cuniculus]
gi|217418307|gb|ACK44309.1| homeobox A4 (predicted) [Oryctolagus cuniculus]
Length = 319
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 194 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 250
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 251 HALCLSERQVKIWFQNRRMKWKKD 274
>gi|332692490|gb|AEE90170.1| Homeobox B4a [Anguilla anguilla]
Length = 243
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Query: 256 TLYPWMKSNQ----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK + +Y TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIA
Sbjct: 125 VVYPWMKKVHVNIVNPNY---TGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIA 181
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KK+
Sbjct: 182 HTLCLSERQIKIWFQNRRMKWKKD 205
>gi|158702265|gb|ABW77464.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQS---------AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 185 TERQVKIWFQNRRMKWKKE 203
>gi|64742|emb|CAA31020.1| unnamed protein product [Xenopus laevis]
Length = 152
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 257 LYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ S+ Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+
Sbjct: 40 IYPWMQRMNSHSGVGY----GTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANA 95
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KKE
Sbjct: 96 LCLTERQIKIWFQNRRMKWKKE 117
>gi|444517709|gb|ELV11727.1| Homeobox protein Hox-B4 [Tupaia chinensis]
Length = 207
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
H +YPWM+ ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 88 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 147
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 148 RVEIAHALCLSERQIKIWFQNRRMKWKKD 176
>gi|195389682|ref|XP_002053505.1| ultrabithorax [Drosophila virilis]
gi|194151591|gb|EDW67025.1| ultrabithorax [Drosophila virilis]
Length = 378
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 266 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 315
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 316 MAHALCLTERQIKIWFQNRRMKLKKE 341
>gi|4322060|gb|AAD15939.1| homeobox protein [Danio rerio]
Length = 244
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 72/118 (61%), Gaps = 9/118 (7%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQ--DHEGEDGATLYPWMKS----NQDASYSCKTGGGN 277
G R + D CS+ S + +YPWMK ASYS GG
Sbjct: 91 GPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYS---GGVP 147
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 205
>gi|390351577|ref|XP_793141.2| PREDICTED: homeobox protein Hox-A7-like [Strongylocentrotus
purpuratus]
Length = 308
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 11/97 (11%)
Query: 248 DHEGEDG-------ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 300
D +G+DG +Y WMK + G KR RQTY+R QTLELEKEFHYN+
Sbjct: 174 DSKGDDGDSEPVYKGPVYNWMK----IPGTHIIGTDRKRGRQTYTRAQTLELEKEFHYNR 229
Query: 301 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKI 337
YL+RKRRIEIA + L+ERQIKIWFQNRRMK KKE++
Sbjct: 230 YLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKERV 266
>gi|291461548|dbj|BAI83408.1| deformed [Parasteatoda tepidariorum]
Length = 291
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 248 DHEGEDGATLYPWMK---SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 304
D G D +YPWM+ +N G KR R Y+R+Q LELEKEFH+N+YL+R
Sbjct: 126 DCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFNRYLTR 185
Query: 305 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 186 RRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 216
>gi|254212178|gb|ACT65753.1| Hoxa4 [Leucoraja erinacea]
Length = 245
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK +N + +Y TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 125 IVYPWMKKIHVTNVNPNY---TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 181
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 182 HTLCLSERQVKIWFQNRRMKWKKD 205
>gi|209489261|gb|ACI49040.1| hypothetical protein Cbre_JD07.007 [Caenorhabditis brenneri]
Length = 252
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 242 SVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYN 299
+S D + G +YPWM TGG G KR R Y+R Q LELEKEFH +
Sbjct: 132 GISGDDDDMDKSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTH 186
Query: 300 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KYL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 187 KYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 222
>gi|195038397|ref|XP_001990646.1| GH19471 [Drosophila grimshawi]
gi|193894842|gb|EDV93708.1| GH19471 [Drosophila grimshawi]
Length = 382
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 270 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 319
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 320 MAHALCLTERQIKIWFQNRRMKLKKE 345
>gi|390351575|ref|XP_003727686.1| PREDICTED: uncharacterized protein LOC574804 [Strongylocentrotus
purpuratus]
Length = 270
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 8/100 (8%)
Query: 236 DVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKE 295
+++D +V ++ +GE A YPWMKS S KR RQTY+R QTLELEKE
Sbjct: 156 EIRDLSAVRCNKEQDGEKMA-FYPWMKSISPTS-------DGKRGRQTYTRQQTLELEKE 207
Query: 296 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
FH+++Y++R+RR EIA L L+ERQIKIWFQNRRMK K+E
Sbjct: 208 FHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKRE 247
>gi|431890742|gb|ELK01621.1| Homeobox protein Hox-B5 [Pteropus alecto]
Length = 269
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|397911062|gb|AFO68807.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 262
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + S G + KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 143 VYPWMKKVHSNTGSTSYNGQDPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 202
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 203 LTERQIKIWFQNRRMKWKKD 222
>gi|351704295|gb|EHB07214.1| Homeobox protein Hox-A5 [Heterocephalus glaber]
Length = 215
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 121 IYPWMR-KLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 179
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 180 SERQIKIWFQNRRMKWKKD 198
>gi|18858847|ref|NP_571197.1| homeobox protein Hox-C4a [Danio rerio]
gi|60392444|sp|Q9PWM3.1|HXC4A_DANRE RecName: Full=Homeobox protein Hox-C4a; Short=Hox-C4
gi|4322096|gb|AAD15957.1| homeobox protein [Danio rerio]
gi|62531038|gb|AAH92923.1| Homeo box C4a [Danio rerio]
gi|182890522|gb|AAI64612.1| Hoxc4a protein [Danio rerio]
Length = 268
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S ++SY+ G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIA
Sbjct: 132 VVYPWMKKIHVSTVNSSYN---GAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIA 188
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 HSLVLSERQIKIWFQNRRMKWKKD 212
>gi|301128900|emb|CBL59362.1| HoxD8 [Scyliorhinus canicula]
Length = 239
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 12/111 (10%)
Query: 228 DSNGVGSPDVQDSCS-VSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTY 284
+++ V PD + S S + + +H ++ + ++PWM+ G +R RQTY
Sbjct: 103 EADLVQYPDCKSSSSNIGEEPEHLNQNSSPTQMFPWMRPQ---------APGRRRGRQTY 153
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 154 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 204
>gi|217035826|gb|ACJ74383.1| Hox4 [Branchiostoma lanceolatum]
Length = 278
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + S G KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 153 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 212
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 213 LTERQIKIWFQNRRMKWKKD 232
>gi|113205492|ref|NP_571610.1| homeobox protein Hox-A4a [Danio rerio]
gi|110282968|sp|Q9PWL5.2|HXA4A_DANRE RecName: Full=Homeobox protein Hox-A4a; AltName: Full=Homeobox
protein Zf-26; AltName: Full=Hoxx4
gi|112419000|gb|AAI22458.1| Homeo box A4a [Danio rerio]
Length = 245
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 72/118 (61%), Gaps = 9/118 (7%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQQ--DHEGEDGATLYPWMKS----NQDASYSCKTGGGN 277
G R + D CS+ S + +YPWMK ASYS GG
Sbjct: 91 GPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYS---GGVP 147
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 205
>gi|432881691|ref|XP_004073904.1| PREDICTED: homeobox protein Hox-A5-like [Oryzias latipes]
Length = 302
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ + D S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 208 IYPWMRKLHISHDIS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 262
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 263 LCLSERQIKIWFQNRRMKWKKD 284
>gi|194742544|ref|XP_001953761.1| GF17924 [Drosophila ananassae]
gi|190626798|gb|EDV42322.1| GF17924 [Drosophila ananassae]
Length = 391
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 279 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 328
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 329 MAHALCLTERQIKIWFQNRRMKLKKE 354
>gi|410255860|gb|JAA15897.1| homeobox C4 [Pan troglodytes]
gi|410348020|gb|JAA40759.1| homeobox C4 [Pan troglodytes]
gi|410348022|gb|JAA40760.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIA
Sbjct: 134 VVYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIA 190
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 HSLCLSERQIKIWFQNRRMKWKKD 214
>gi|123298|sp|P17278.1|HXD4_CHICK RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-A; Short=Chox-A
Length = 235
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + +GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 121 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 180
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 181 LCLSERQIKIWFQNRRMKWKKD 202
>gi|358336509|dbj|GAA54999.1| homeobox protein abdominal-A [Clonorchis sinensis]
Length = 341
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 71/110 (64%), Gaps = 20/110 (18%)
Query: 243 VSSQQDHEGEDGATLYP------WMKSNQDASYSCK------TGGGN----KRSRQTYSR 286
+ Q +HE +D A + P MKS C+ G N +R RQTYSR
Sbjct: 69 IKVQVEHEVDDNAEIAPTALAPRLMKS----VVGCRRVFRNLMSGPNSVQRRRGRQTYSR 124
Query: 287 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEK 336
YQTLELEKEF Y+ YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 125 YQTLELEKEFQYSHYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKLKKER 174
>gi|17136422|ref|NP_476693.1| abdominal A, isoform A [Drosophila melanogaster]
gi|281361946|ref|NP_001163632.1| abdominal A, isoform C [Drosophila melanogaster]
gi|386765930|ref|NP_001247145.1| abdominal A, isoform D [Drosophila melanogaster]
gi|7523|emb|CAA38321.1| homeobox protein [Drosophila melanogaster]
gi|969084|gb|AAA84406.1| ABD-AI [Drosophila melanogaster]
gi|7300194|gb|AAF55359.1| abdominal A, isoform A [Drosophila melanogaster]
gi|54650674|gb|AAV36916.1| RE04174p [Drosophila melanogaster]
gi|220953476|gb|ACL89281.1| abd-A-PA [synthetic construct]
gi|272477023|gb|ACZ94928.1| abdominal A, isoform C [Drosophila melanogaster]
gi|383292756|gb|AFH06463.1| abdominal A, isoform D [Drosophila melanogaster]
Length = 330
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 113 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 172
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 173 HALCLTERQIKIWFQNRRMKLKKE 196
>gi|154800435|ref|NP_038581.2| homeobox protein Hox-C4 [Mus musculus]
gi|585281|sp|Q08624.1|HXC4_MOUSE RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein Hox-3.5
gi|385750|gb|AAB27153.1| homeobox [Mus sp.]
gi|416420|dbj|BAA01947.1| Hox 3.5 [Mus musculus]
gi|448269|prf||1916397A Hox3.5 gene
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|410969016|ref|XP_003990994.1| PREDICTED: homeobox protein Hox-D8 [Felis catus]
Length = 269
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ + G +R RQTYSR+QTLE
Sbjct: 139 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLE 190
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 191 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 234
>gi|195038413|ref|XP_001990654.1| GH19476 [Drosophila grimshawi]
gi|193894850|gb|EDV93716.1| GH19476 [Drosophila grimshawi]
Length = 486
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 3/79 (3%)
Query: 260 WMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTER 319
W + + CK +KR+RQTYSRYQTLELEKEFH+N+Y++R+RRI+IAH L L+ER
Sbjct: 293 WSHIEETLASDCK---DSKRTRQTYSRYQTLELEKEFHFNRYITRRRRIDIAHALSLSER 349
Query: 320 QIKIWFQNRRMKLKKEKIV 338
QIKIWFQNRRMK KK++ +
Sbjct: 350 QIKIWFQNRRMKSKKDRTL 368
>gi|17554302|ref|NP_498695.1| Protein MAB-5 [Caenorhabditis elegans]
gi|21264452|sp|P10038.3|MAB5_CAEEL RecName: Full=Homeobox protein mab-5; AltName: Full=Protein male
abnormal 5
gi|9837168|gb|AAG00458.1|AF277990_1 MAB-5 [Caenorhabditis elegans]
gi|373253909|emb|CCD63641.1| Protein MAB-5 [Caenorhabditis elegans]
Length = 200
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 76/123 (61%), Gaps = 20/123 (16%)
Query: 216 MDRNGNPVG---LRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK 272
MD + NP L+A S G + + S SQ ++PWMK
Sbjct: 70 MDNSSNPFAYNPLQATSANFG--ETRTSMPAISQ---------PVFPWMK------MGGA 112
Query: 273 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 332
GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L LTERQ+KIWFQNRRMK
Sbjct: 113 KGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKH 172
Query: 333 KKE 335
KKE
Sbjct: 173 KKE 175
>gi|195110393|ref|XP_001999766.1| GI24708 [Drosophila mojavensis]
gi|193916360|gb|EDW15227.1| GI24708 [Drosophila mojavensis]
Length = 379
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 267 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 316
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 317 MAHALCLTERQIKIWFQNRRMKLKKE 342
>gi|112807184|ref|NP_032302.2| homeobox protein Hox-D8 [Mus musculus]
gi|408360342|sp|P23463.4|HXD8_MOUSE RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-4.3; AltName: Full=Homeobox protein Hox-5.4
gi|162319132|gb|AAI56342.1| Homeo box D8 [synthetic construct]
gi|225000984|gb|AAI72665.1| Homeo box D8 [synthetic construct]
Length = 289
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ + G +R RQTYSR+QTLE
Sbjct: 158 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLE 209
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 210 LEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKKE 253
>gi|59939334|gb|AAX12426.1| Dbuz\abd-A-PA [Drosophila buzzatii]
Length = 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 256 TLYPWMKSNQD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 111 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 170
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L LTERQIKIWFQNRRMKLKKE
Sbjct: 171 HALCLTERQIKIWFQNRRMKLKKE 194
>gi|355786156|gb|EHH66339.1| Homeobox protein Hox-3E [Macaca fascicularis]
Length = 206
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 77 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 136
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 137 LSERQIKIWFQNRRMKWKKD 156
>gi|311272689|ref|XP_003133544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D8-like [Sus
scrofa]
Length = 292
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 232 VGSPDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
V PD + S + DH + + ++PWM+ + G +R RQTYSR+Q
Sbjct: 159 VQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQ 210
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 211 TLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 257
>gi|76825416|gb|AAI07173.1| Hoxa4 protein [Mus musculus]
Length = 187
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK + A S GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 60 VVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 119
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQ+KIWFQNRRMK KK+
Sbjct: 120 CLSERQVKIWFQNRRMKWKKD 140
>gi|148671994|gb|EDL03941.1| homeobox C4 [Mus musculus]
Length = 262
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 133 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 189
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 190 SLCLSERQIKIWFQNRRMKWKKD 212
>gi|213513916|ref|NP_001135094.1| homeobox protein HoxC6bb [Salmo salar]
gi|157815997|gb|ABV82017.1| homeobox protein HoxC6bb [Salmo salar]
gi|158702358|gb|ABW77546.1| homeobox protein HoxC6bb [Salmo salar]
Length = 232
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQ-RMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KKE
Sbjct: 181 SERQIKIWFQNRRMKWKKE 199
>gi|157137587|ref|XP_001664020.1| hypothetical protein AaeL_AAEL013832 [Aedes aegypti]
Length = 248
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 58/69 (84%)
Query: 267 ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQ 326
+ + C G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQ
Sbjct: 20 SEFYCPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 79
Query: 327 NRRMKLKKE 335
NRRMKLKKE
Sbjct: 80 NRRMKLKKE 88
>gi|198278433|ref|NP_001094257.1| homeo box B4 [Rattus norvegicus]
gi|149053985|gb|EDM05802.1| similar to homeotic protein Hox B4 - mouse (predicted) [Rattus
norvegicus]
gi|171847054|gb|AAI61863.1| Hoxb4 protein [Rattus norvegicus]
Length = 250
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 131 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 187
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 188 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 219
>gi|354474768|ref|XP_003499602.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4-like
[Cricetulus griseus]
Length = 192
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +YS GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 73 SHSACKEPVVYPWMRKVHVSTVNPNYS---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 129
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 130 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 161
>gi|220898192|gb|ACL81447.1| HoxB4 [Latimeria menadoensis]
Length = 247
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + + TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 129 VYPWMKKVHVNTVNPNFTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLC 188
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 189 LSERQIKIWFQNRRMKWKKD 208
>gi|154183831|gb|ABS70771.1| Hoxa7a [Haplochromis burtoni]
Length = 224
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + KR RQTYSR+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 115 MYPWMRVSDP---------NRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCL 165
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 166 SERQIKIWFQNRRMKWKKD 184
>gi|332692472|gb|AEE90154.1| Homeobox A4a [Anguilla anguilla]
Length = 241
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 22/168 (13%)
Query: 189 ETLNATNFVPKDEAISEMVDGKPPGF---NMDRNG----------NPVG----LRADSNG 231
E A F +DEA + D PG+ N NG PV +R SN
Sbjct: 37 EPPKAPGFAHQDEAPFQRTDYPEPGYEYNNAHSNGLEDFPGHIHTQPVPQNHDIRMISNA 96
Query: 232 VGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNQDASYSCKT--GGGNKRSRQTYSRY 287
CS+S++ + +YPWMK + C GG KRSR Y+R
Sbjct: 97 DEGTVAPKDCSLSNETLPPAQKTKEPVVYPWMKKVHVYTV-CPNYNGGPPKRSRTAYTRQ 155
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 156 QALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 203
>gi|395835051|ref|XP_003790498.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Otolemur garnettii]
gi|395835053|ref|XP_003790499.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Otolemur garnettii]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|118151296|ref|NP_001071582.1| homeobox protein Hox-B4 [Bos taurus]
gi|122132251|sp|Q08DG5.1|HXB4_BOVIN RecName: Full=Homeobox protein Hox-B4
gi|115305206|gb|AAI23762.1| Homeobox B4 [Bos taurus]
Length = 251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|110625619|ref|NP_034589.3| homeobox protein Hox-B4 [Mus musculus]
gi|123266|sp|P10284.1|HXB4_MOUSE RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6
gi|193944|gb|AAA37848.1| homeo box 2.6 (Hox-2.6) gene product [Mus musculus]
gi|74228946|dbj|BAE21943.1| unnamed protein product [Mus musculus]
gi|148684081|gb|EDL16028.1| homeobox B4 [Mus musculus]
Length = 250
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 131 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 187
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 188 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 219
>gi|156362|gb|AAA28106.1| DNA-binding protein mab5, partial [Caenorhabditis elegans]
Length = 211
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 76/123 (61%), Gaps = 20/123 (16%)
Query: 216 MDRNGNPVG---LRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCK 272
MD + NP L+A S G + + S SQ ++PWMK
Sbjct: 81 MDNSSNPFAYNPLQATSANFG--ETRTSMPAISQ---------PVFPWMK------MGGA 123
Query: 273 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 332
GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L LTERQ+KIWFQNRRMK
Sbjct: 124 KGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKH 183
Query: 333 KKE 335
KKE
Sbjct: 184 KKE 186
>gi|57106663|ref|XP_543624.1| PREDICTED: homeobox protein Hox-C4 isoform 4 [Canis lupus
familiaris]
gi|73996160|ref|XP_856443.1| PREDICTED: homeobox protein Hox-C4 isoform 8 [Canis lupus
familiaris]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|403183386|gb|EAT33900.2| AAEL013832-PA [Aedes aegypti]
Length = 418
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 274 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 333
G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLK
Sbjct: 197 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 256
Query: 334 KE 335
KE
Sbjct: 257 KE 258
>gi|220898216|gb|ACL81469.1| HoxD4 [Latimeria menadoensis]
Length = 233
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 82/140 (58%), Gaps = 17/140 (12%)
Query: 213 GFNMDRNGNPVGLRADSNGVGS--PDVQDSCS--------VSSQQDHEGEDG------AT 256
G D P G + +G S P Q+ CS +QQ ++ + G A
Sbjct: 62 GNVQDSTEQPRGHVQEQSGPQSHFPVQQEHCSPLPIPTSRSCNQQQNKNQSGTVSKQPAI 121
Query: 257 LYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 122 VYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 181
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 182 LSERQIKIWFQNRRMKWKKD 201
>gi|158081778|ref|NP_001103354.1| homeobox protein Hox-C4 [Rattus norvegicus]
gi|149031888|gb|EDL86800.1| homeo box C4 (mapped) [Rattus norvegicus]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|224040|prf||1008211A fushi tarazu gene
Length = 345
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +VS + DH +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 236 SPGEKSSSAVSQEIDHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 292
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 333
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK K
Sbjct: 293 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSK 335
>gi|187956227|gb|AAI50665.1| Homeo box C4 [Mus musculus]
gi|219841914|gb|AAI44779.1| Hoxc4 protein [Mus musculus]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIYVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|348562275|ref|XP_003466936.1| PREDICTED: homeobox protein Hox-B6-like [Cavia porcellus]
Length = 224
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ ++ S G +RSRQTY+R QTLELEKEFHYN+YL+R+R +EIAH L L
Sbjct: 127 VYPWMQ-RMNSCNSSSFGPSGRRSRQTYTRLQTLELEKEFHYNRYLTRRRLLEIAHALCL 185
Query: 317 TERQIKIWFQNRRMKLKKEKIVM 339
E QIKIWFQNRRMK KKE ++
Sbjct: 186 IEPQIKIWFQNRRMKWKKESKLL 208
>gi|198453089|ref|XP_001359066.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|218512108|sp|P20822.3|UBX_DROPS RecName: Full=Homeotic protein ultrabithorax
gi|198132207|gb|EAL28209.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 385
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 273 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 322
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 323 MAHALCLTERQIKIWFQNRRMKLKKE 348
>gi|195146376|ref|XP_002014162.1| GL23004 [Drosophila persimilis]
gi|194103105|gb|EDW25148.1| GL23004 [Drosophila persimilis]
Length = 387
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Query: 250 EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 309
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 275 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 324
Query: 310 IAHELQLTERQIKIWFQNRRMKLKKE 335
+AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 325 MAHALCLTERQIKIWFQNRRMKLKKE 350
>gi|396184|emb|CAA48784.1| Hox-3.5 [Mus musculus]
Length = 264
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|444517710|gb|ELV11728.1| Homeobox protein Hox-B5 [Tupaia chinensis]
Length = 230
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 137 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 191
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|32386|emb|CAA30376.1| unnamed protein product [Homo sapiens]
gi|11993919|gb|AAG42145.1| HOXC4 [Homo sapiens]
Length = 264
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRAAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|332692499|gb|AEE90178.1| Homeobox B5b [Anguilla anguilla]
gi|385654492|gb|AFI61991.1| Hox-B5b [Anguilla japonica]
Length = 275
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ N D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 182 IFPWMRKLHINHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 236
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 237 LCLSERQIKIWFQNRRMKWKKD 258
>gi|296202585|ref|XP_002748519.1| PREDICTED: homeobox protein Hox-B5 [Callithrix jacchus]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|332207732|ref|XP_003252950.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Nomascus leucogenys]
gi|332207734|ref|XP_003252951.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Nomascus leucogenys]
Length = 264
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|307213521|gb|EFN88930.1| Homeotic protein antennapedia [Harpegnathos saltator]
Length = 236
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 155 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 212
>gi|12848710|dbj|BAB28059.1| unnamed protein product [Mus musculus]
Length = 230
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 137 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 191
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|4504469|ref|NP_002138.1| homeobox protein Hox-B5 [Homo sapiens]
gi|114666352|ref|XP_001173004.1| PREDICTED: homeobox protein Hox-B5 [Pan troglodytes]
gi|297715933|ref|XP_002834298.1| PREDICTED: homeobox protein Hox-B5 [Pongo abelii]
gi|397514564|ref|XP_003827551.1| PREDICTED: homeobox protein Hox-B5 [Pan paniscus]
gi|403279481|ref|XP_003931278.1| PREDICTED: homeobox protein Hox-B5 [Saimiri boliviensis
boliviensis]
gi|400000|sp|P09067.3|HXB5_HUMAN RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein HHO.C10; AltName: Full=Homeobox protein Hox-2A;
AltName: Full=Homeobox protein Hu-1
gi|11138933|gb|AAG31553.1|AF287967_3 homeobox B5 [Homo sapiens]
gi|184293|gb|AAA52682.1| homeobox protein [Homo sapiens]
gi|109659004|gb|AAI17248.1| Homeobox B5 [Homo sapiens]
gi|119615143|gb|EAW94737.1| homeobox B5 [Homo sapiens]
gi|189054616|dbj|BAG37466.1| unnamed protein product [Homo sapiens]
gi|208968499|dbj|BAG74088.1| homeobox B5 [synthetic construct]
gi|410212186|gb|JAA03312.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|325260881|gb|ADZ04670.1| homeobox D8 [Notophthalmus viridescens]
Length = 246
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 19/104 (18%)
Query: 241 CSVSSQQDHEGEDG---------ATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
C SS H GED + ++PWM+ + G +R RQTYSR+QTLE
Sbjct: 118 CKSSS--GHVGEDPEHLNQNSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLE 167
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 168 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 211
>gi|28629647|gb|AAO43029.1| HoxB4 [Latimeria menadoensis]
Length = 244
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 4/80 (5%)
Query: 257 LYPWMKS-NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + + ++ TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 129 VYPWMKKVHVNPNF---TGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLC 185
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 186 LSERQIKIWFQNRRMKWKKD 205
>gi|1334709|emb|CAA36898.1| unnamed protein product [Gallus gallus]
Length = 225
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 255 ATLYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
A +YPWMK S + +GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 111 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 170
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 171 LCLSERQIKIWFQNRRMKWKKD 192
>gi|355568481|gb|EHH24762.1| hypothetical protein EGK_08477 [Macaca mulatta]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|332259417|ref|XP_003278786.1| PREDICTED: homeobox protein Hox-B5-like [Nomascus leucogenys]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|308481900|ref|XP_003103154.1| CRE-MAB-5 protein [Caenorhabditis remanei]
gi|308260259|gb|EFP04212.1| CRE-MAB-5 protein [Caenorhabditis remanei]
Length = 199
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L L
Sbjct: 102 VFPWMK------MGGAKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHL 155
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 156 TERQVKIWFQNRRMKHKKE 174
>gi|160358780|ref|NP_032294.2| homeobox protein Hox-B5 [Mus musculus]
gi|300794055|ref|NP_001178854.1| homeo box B5 [Rattus norvegicus]
gi|114152820|sp|P09079.3|HXB5_MOUSE RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein H24.1; AltName: Full=Homeobox protein Hox-2.1;
AltName: Full=Homeobox protein Mu-1
gi|73695287|gb|AAI03608.1| Homeo box B5 [Mus musculus]
gi|73695374|gb|AAI03597.1| Homeo box B5 [Mus musculus]
gi|73695450|gb|AAI03596.1| Homeo box B5 [Mus musculus]
gi|73695452|gb|AAI03605.1| Homeo box B5 [Mus musculus]
gi|74225740|dbj|BAE21695.1| unnamed protein product [Mus musculus]
gi|148684080|gb|EDL16027.1| homeobox B5 [Mus musculus]
gi|149053984|gb|EDM05801.1| similar to homeotic protein Hox B5 - mouse (predicted) [Rattus
norvegicus]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|24497538|ref|NP_055435.2| homeobox protein Hox-C4 [Homo sapiens]
gi|24497540|ref|NP_705897.1| homeobox protein Hox-C4 [Homo sapiens]
gi|302565652|ref|NP_001181685.1| homeobox protein Hox-C4 [Macaca mulatta]
gi|296211864|ref|XP_002752589.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Callithrix jacchus]
gi|296211866|ref|XP_002752590.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Callithrix jacchus]
gi|332839196|ref|XP_003313692.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan troglodytes]
gi|332839198|ref|XP_003313693.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan troglodytes]
gi|397521945|ref|XP_003831043.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan paniscus]
gi|397521947|ref|XP_003831044.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan paniscus]
gi|402886203|ref|XP_003906527.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Papio anubis]
gi|402886205|ref|XP_003906528.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Papio anubis]
gi|403296837|ref|XP_003939301.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403296839|ref|XP_003939302.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Saimiri boliviensis
boliviensis]
gi|426372806|ref|XP_004053307.1| PREDICTED: homeobox protein Hox-C4 [Gorilla gorilla gorilla]
gi|281185468|sp|P09017.2|HXC4_HUMAN RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein CP19; AltName: Full=Homeobox protein Hox-3E
gi|119617150|gb|EAW96744.1| hCG2044075 [Homo sapiens]
gi|119617155|gb|EAW96749.1| hCG2043420 [Homo sapiens]
gi|208968509|dbj|BAG74093.1| homeobox C4 [synthetic construct]
gi|355564298|gb|EHH20798.1| Homeobox protein Hox-3E [Macaca mulatta]
gi|410226588|gb|JAA10513.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|63259070|gb|AAD46174.2|AF151671_1 Lox5 homeobox protein [Alitta virens]
Length = 132
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR+RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 6 KRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE 63
>gi|86604731|ref|NP_001034510.1| transcription factor deformed [Tribolium castaneum]
gi|13241682|gb|AAK16423.1|AF321227_3 Dfd [Tribolium castaneum]
gi|1754686|gb|AAB39355.1| transcription factor Deformed [Tribolium castaneum]
gi|270002806|gb|EEZ99253.1| deformed [Tribolium castaneum]
Length = 412
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Query: 257 LYPWMKSNQDASYSCKT---GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
+YPWM+ A S T G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 210 IYPWMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 269
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 270 LVLSERQIKIWFQNRRMKWKKD 291
>gi|354474766|ref|XP_003499601.1| PREDICTED: homeobox protein Hox-B5-like [Cricetulus griseus]
gi|344249142|gb|EGW05246.1| Homeobox protein Hox-B5 [Cricetulus griseus]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|387862366|gb|AFK08969.1| ultrabithorax variant b, partial [Bicyclus anynana]
Length = 138
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
Query: 256 TLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 48 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 100
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMKLKKE
Sbjct: 101 LTERQIKIWFQNRRMKLKKE 120
>gi|156139065|ref|NP_001095843.1| homeobox protein Hox-C4 [Bos taurus]
gi|301776118|ref|XP_002923477.1| PREDICTED: homeobox protein Hox-C4-like [Ailuropoda melanoleuca]
gi|311255481|ref|XP_001925163.2| PREDICTED: homeobox protein Hox-C4-like [Sus scrofa]
gi|133777439|gb|AAI14691.1| HOXC4 protein [Bos taurus]
gi|281342179|gb|EFB17763.1| hypothetical protein PANDA_012616 [Ailuropoda melanoleuca]
gi|296487922|tpg|DAA30035.1| TPA: homeobox C4 [Bos taurus]
gi|431921603|gb|ELK18955.1| Homeobox protein Hox-C4 [Pteropus alecto]
gi|440900711|gb|ELR51789.1| Homeobox protein Hox-C4 [Bos grunniens mutus]
Length = 264
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|110282969|sp|Q9YGT6.2|HXA5A_DANRE RecName: Full=Homeobox protein Hox-A5a
Length = 265
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMR-KLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 229
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 230 SERQIKIWFQNRRMKWKKD 248
>gi|432112556|gb|ELK35272.1| Homeobox protein Hox-C4 [Myotis davidii]
Length = 264
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|390351591|ref|XP_783280.3| PREDICTED: uncharacterized protein LOC577994 [Strongylocentrotus
purpuratus]
Length = 394
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 54/60 (90%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKI 337
KR RQTY+R QTLELEKEFHYN+YL+RKRRIEIA + L+ERQIKIWFQNRRMK KKE++
Sbjct: 293 KRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKERV 352
>gi|522335|gb|AAA37842.1| homeobox protein [Mus musculus]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|260835439|ref|XP_002612716.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
gi|229298095|gb|EEN68725.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
Length = 275
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + S G KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 150 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 209
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 210 LTERQIKIWFQNRRMKWKKD 229
>gi|34484445|gb|AAQ72845.1| Hoxb5b [Sphoeroides nephelus]
Length = 280
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|109114181|ref|XP_001088160.1| PREDICTED: homeobox protein Hox-B5 [Macaca mulatta]
gi|311267500|ref|XP_003131598.1| PREDICTED: homeobox protein Hox-B5-like [Sus scrofa]
gi|345805494|ref|XP_003435305.1| PREDICTED: homeobox protein Hox-B5 [Canis lupus familiaris]
gi|402899489|ref|XP_003912728.1| PREDICTED: homeobox protein Hox-B5 [Papio anubis]
gi|426237817|ref|XP_004012854.1| PREDICTED: homeobox protein Hox-B5 [Ovis aries]
gi|84579185|dbj|BAE73026.1| hypothetical protein [Macaca fascicularis]
gi|355753956|gb|EHH57921.1| hypothetical protein EGM_07666 [Macaca fascicularis]
gi|440910524|gb|ELR60318.1| Homeobox protein Hox-B5 [Bos grunniens mutus]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|348581047|ref|XP_003476289.1| PREDICTED: homeobox protein Hox-C4-like [Cavia porcellus]
gi|351706132|gb|EHB09051.1| Homeobox protein Hox-C4 [Heterocephalus glaber]
Length = 264
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 7/83 (8%)
Query: 257 LYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 312
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 135 VYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAH 191
Query: 313 ELQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 SLCLSERQIKIWFQNRRMKWKKD 214
>gi|317419675|emb|CBN81712.1| Homeobox protein Hox-B5b [Dicentrarchus labrax]
Length = 287
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWM+ + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 251
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 252 SERQIKIWFQNRRMKWKKD 270
>gi|395826616|ref|XP_003786513.1| PREDICTED: homeobox protein Hox-B5 [Otolemur garnettii]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|426347612|ref|XP_004041443.1| PREDICTED: homeobox protein Hox-B5 [Gorilla gorilla gorilla]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|387915092|gb|AFK11155.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 238
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 12/111 (10%)
Query: 228 DSNGVGSPDVQDSCS-VSSQQDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKRSRQTY 284
+++ V PD + S S + + +H ++ + ++PWM+ G +R RQTY
Sbjct: 103 EADLVQYPDCKSSSSNIGEEPEHLNQNSSPTQMFPWMRPQ---------APGRRRGRQTY 153
Query: 285 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 154 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 204
>gi|341900677|gb|EGT56612.1| hypothetical protein CAEBREN_04649 [Caenorhabditis brenneri]
Length = 198
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 6/79 (7%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L L
Sbjct: 101 VFPWMK------MGGAKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHL 154
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK KKE
Sbjct: 155 TERQVKIWFQNRRMKHKKE 173
>gi|158702222|gb|ABW77442.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Query: 253 DGAT--LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 307
DGA + PWM+ N D+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 180 DGAQPHISPWMRKLHINHDS----LTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRR 235
Query: 308 IEIAHELQLTERQIKIWFQNRRMKLKKE 335
IEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 236 IEIAHALCLSERQIKIWFQNRRMKWKKD 263
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 234 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELE 293
+P + S S+ +YPWM+ S+ GG KRSR Y+R Q LELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMR-KLHISHDNYNGGEPKRSRTAYTRQQVLELE 211
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 253
>gi|296204456|ref|XP_002749335.1| PREDICTED: homeobox protein Hox-D8 [Callithrix jacchus]
Length = 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 232 VGSPDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
V PD + S + DH + + ++PWM+ + G +R RQTYSR+Q
Sbjct: 155 VQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQ 206
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 207 TLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 253
>gi|149723918|ref|XP_001502124.1| PREDICTED: homeobox protein Hox-B5-like [Equus caballus]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHFSHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|402899487|ref|XP_003912727.1| PREDICTED: homeobox protein Hox-B4 [Papio anubis]
Length = 251
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|344285929|ref|XP_003414712.1| PREDICTED: homeobox protein Hox-B5-like [Loxodonta africana]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|158702311|gb|ABW77507.1| homeobox protein HoxB5bb [Salmo salar]
Length = 279
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ N + + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 186 IFPWMRKLHINHEMA-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHT 240
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 241 LCLTERQIKIWFQNRRMKWKKD 262
>gi|12854614|dbj|BAB30086.1| unnamed protein product [Mus musculus]
Length = 218
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ + G +R RQTYSR+QTLE
Sbjct: 87 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLE 138
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 139 LEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKKE 182
>gi|311267494|ref|XP_003131596.1| PREDICTED: homeobox protein Hox-B4-like [Sus scrofa]
Length = 251
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|47229432|emb|CAF99420.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ + +G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 142 IYPWMRKIHISHE--LSGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 199
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 200 SERQIKIWFQNRRMKWKKD 218
>gi|166429524|ref|NP_001107631.1| abdominal A isoform S [Bombyx mori]
gi|164682498|gb|ABY66346.1| homeobox protein [Bombyx mori]
gi|225637156|dbj|BAH30153.1| abdominal-A [Bombyx mori]
Length = 347
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 61/87 (70%), Gaps = 9/87 (10%)
Query: 258 YPWMKSNQ---------DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 308
YPWM ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRI
Sbjct: 194 YPWMSITDWMNPFDRVVCGEFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRI 253
Query: 309 EIAHELQLTERQIKIWFQNRRMKLKKE 335
EIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 254 EIAHALCLTERQIKIWFQNRRMKLKKE 280
>gi|410895281|ref|XP_003961128.1| PREDICTED: homeobox protein Hox-B5b-like [Takifugu rubripes]
gi|119370786|sp|Q1KKX0.1|HXB5B_FUGRU RecName: Full=Homeobox protein Hox-B5b
gi|94482807|gb|ABF22424.1| homeobox protein HoxB5b [Takifugu rubripes]
Length = 280
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|195389694|ref|XP_002053511.1| GJ23928 [Drosophila virilis]
gi|194151597|gb|EDW67031.1| GJ23928 [Drosophila virilis]
Length = 464
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 7/115 (6%)
Query: 227 ADSNGVGSPDVQDSCSVSSQQDHEGEDGAT---LYPWMKSNQDASYSCKTGGGNKRSRQT 283
D G+ +P Q S + +H AT + W + + CK +KR+RQT
Sbjct: 238 VDGIGISTPP-QSPAEKSHEINHRIVTAATGNNEFNWSHIEETLASDCK---DSKRTRQT 293
Query: 284 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
YSRYQTLELEKEFH+N+Y++R+RR++IAH L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 294 YSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRRMKSKKDRTL 348
>gi|5002502|dbj|BAA78622.1| AmphiHox4 [Branchiostoma floridae]
Length = 275
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + S G KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 150 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 209
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 210 LTERQIKIWFQNRRMKWKKD 229
>gi|194899153|ref|XP_001979125.1| ftz [Drosophila erecta]
gi|190650828|gb|EDV48083.1| ftz [Drosophila erecta]
Length = 420
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + +VS + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 217 SPGEKSLSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 273
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 274 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 321
>gi|403280029|ref|XP_003931541.1| PREDICTED: homeobox protein Hox-B4 [Saimiri boliviensis
boliviensis]
Length = 203
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 90 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 146
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 147 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 178
>gi|348562609|ref|XP_003467102.1| PREDICTED: homeobox protein Hox-B7-like [Cavia porcellus]
Length = 127
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 274 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 333
G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK K
Sbjct: 44 GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 103
Query: 334 KE 335
KE
Sbjct: 104 KE 105
>gi|301762930|ref|XP_002916893.1| PREDICTED: homeobox protein Hox-B4-like [Ailuropoda melanoleuca]
Length = 183
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
H +YPWM+ ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 71 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 130
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 131 RVEIAHALCLSERQIKIWFQNRRMKWKKD 159
>gi|444513901|gb|ELV10486.1| Homeobox protein Hox-C4 [Tupaia chinensis]
Length = 270
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 141 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 200
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 201 LSERQIKIWFQNRRMKWKKD 220
>gi|195498911|ref|XP_002096728.1| GE24884 [Drosophila yakuba]
gi|194182829|gb|EDW96440.1| GE24884 [Drosophila yakuba]
Length = 421
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 234 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTL 290
SP + S +V + +H +GA + W + + CK +KR+RQTY+RYQTL
Sbjct: 218 SPGEKSSPAVGQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 274
Query: 291 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKIV 338
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK++ +
Sbjct: 275 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL 322
>gi|426355746|ref|XP_004045269.1| PREDICTED: homeobox protein Hox-A4 [Gorilla gorilla gorilla]
Length = 187
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 60 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 116
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 117 HTLCLSERQVKIWFQNRRMKWKKD 140
>gi|301128876|emb|CBL59340.1| HoxA4 [Scyliorhinus canicula]
Length = 247
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 128 VYPWMKKIHVTTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 187
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQ+KIWFQNRRMK KK+
Sbjct: 188 LSERQVKIWFQNRRMKWKKD 207
>gi|449266120|gb|EMC77230.1| Homeobox protein Hox-C4, partial [Columba livia]
Length = 224
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 8/102 (7%)
Query: 235 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELE 293
P+ + S +S+Q +YPWMK ++ + GG KRSR Y+R Q LELE
Sbjct: 123 PNPEHPTSTASKQ-------PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELE 175
Query: 294 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 176 KEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 217
>gi|147905770|ref|NP_001083728.1| homeobox protein pXhoxc8 [Xenopus laevis]
gi|2459821|gb|AAB71818.1| homeobox protein pXhoxc8 [Xenopus laevis]
Length = 256
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDS--CSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + S Q H ++ + ++PWM+ + G +
Sbjct: 115 GAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWMRPHAP---------GRRS 165
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 166 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQLKIWFQNRRMKWKKE 221
>gi|24119205|ref|NP_571615.1| homeobox protein Hox-A5a [Danio rerio]
gi|4322062|gb|AAD15940.1| homeobox protein [Danio rerio]
gi|190337204|gb|AAI62990.1| Homeo box A5a [Danio rerio]
gi|190338205|gb|AAI62975.1| Homeo box A5a [Danio rerio]
Length = 227
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 IYPWMR-KLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 191
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 192 SERQIKIWFQNRRMKWKKD 210
>gi|340727696|ref|XP_003402174.1| PREDICTED: hypothetical protein LOC100650225 [Bombus terrestris]
Length = 355
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
Y WMKS + + G+KR+RQTY+R QTLELEKEFHYN+YL+RKRR+EIA L L+
Sbjct: 193 YAWMKSYSNGE---RNNVGHKRTRQTYTRSQTLELEKEFHYNRYLTRKRRVEIARILSLS 249
Query: 318 ERQIKIWFQNRRMKLKK 334
ERQIKIWFQNRRMK KK
Sbjct: 250 ERQIKIWFQNRRMKAKK 266
>gi|209867704|gb|ACI90390.1| Hox-6c [Philodina roseola]
Length = 108
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 55/58 (94%)
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
KR+RQTYSR+QTLELEKEFHY KYL+R+RRIEIAH LQLTERQIKIWFQNRRMK KKE
Sbjct: 28 KRTRQTYSRHQTLELEKEFHYTKYLTRRRRIEIAHNLQLTERQIKIWFQNRRMKWKKE 85
>gi|126308245|ref|XP_001367145.1| PREDICTED: homeobox protein Hox-B5 [Monodelphis domestica]
Length = 267
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 174 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 228
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 229 LCLSERQIKIWFQNRRMKWKKD 250
>gi|308474472|ref|XP_003099457.1| CRE-LIN-39 protein [Caenorhabditis remanei]
gi|308266646|gb|EFP10599.1| CRE-LIN-39 protein [Caenorhabditis remanei]
Length = 256
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Query: 253 DGATLYPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 310
G +YPWM TGG G KR R Y+R Q LELEKEFH +KYL+RKRRIE+
Sbjct: 147 SGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEV 201
Query: 311 AHELQLTERQIKIWFQNRRMKLKKE 335
AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 202 AHSLMLTERQVKIWFQNRRMKHKKE 226
>gi|158702280|gb|ABW77478.1| homeobox protien HoxB5ab [Salmo salar]
Length = 276
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 183 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 237
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 238 LCLSERQIKIWFQNRRMKWKKD 259
>gi|359320350|ref|XP_003639319.1| PREDICTED: homeobox protein Hox-B4 [Canis lupus familiaris]
Length = 280
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|14916594|sp|Q9IA22.1|HXA4_HETFR RecName: Full=Homeobox protein Hox-A4
gi|7271831|gb|AAF44642.1|AF224262_4 HoxA4 [Heterodontus francisci]
Length = 247
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 257 LYPWMKSNQDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPWMK + + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 128 VYPWMKKIHVTTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 187
Query: 316 LTERQIKIWFQNRRMKLKKE 335
L+ERQ+KIWFQNRRMK KK+
Sbjct: 188 LSERQVKIWFQNRRMKWKKD 207
>gi|195446503|ref|XP_002070808.1| GK10825 [Drosophila willistoni]
gi|194166893|gb|EDW81794.1| GK10825 [Drosophila willistoni]
Length = 430
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 58/62 (93%)
Query: 277 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEK 336
+KR+RQTY+RYQTLELEKEFH+N+Y++R+RRI+IAH L LTERQIKIWFQNRRMK KK++
Sbjct: 273 SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIAHALSLTERQIKIWFQNRRMKSKKDR 332
Query: 337 IV 338
+
Sbjct: 333 TL 334
>gi|66364492|gb|AAH95947.1| Homeo box B4 [Mus musculus]
Length = 250
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 306
H +YPWM+ ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 131 SHSAFKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 190
Query: 307 RIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 RVEIAHALCLSERQIKIWFQNRRMKWKKD 219
>gi|54261740|ref|NP_571176.2| homeobox protein Hox-B5a [Danio rerio]
gi|60392406|sp|P09014.2|HXB5A_DANRE RecName: Full=Homeobox protein Hox-B5a; Short=Hox-B5; AltName:
Full=Homeobox protein Zf-21
gi|26984637|emb|CAD59114.1| SI:dZ254O17.4 (homeo box protein B5a) [Danio rerio]
gi|47938028|gb|AAH71493.1| Homeo box B5a [Danio rerio]
Length = 275
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 182 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 236
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 237 LCLSERQIKIWFQNRRMKWKKD 258
>gi|403288103|ref|XP_003935254.1| PREDICTED: homeobox protein Hox-A4, partial [Saimiri boliviensis
boliviensis]
Length = 163
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + SY+ GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 34 VVYPWMKKIHVSAVNPSYN---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 90
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 91 HTLCLSERQVKIWFQNRRMKWKKD 114
>gi|281344381|gb|EFB19965.1| hypothetical protein PANDA_005012 [Ailuropoda melanoleuca]
Length = 256
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 163 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 217
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 218 LCLSERQIKIWFQNRRMKWKKD 239
>gi|158702291|gb|ABW77488.1| homeobox protein HoxB5ba [Salmo salar]
Length = 279
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ N + + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 186 IFPWMRKLHINHEMA-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHT 240
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L LTERQIKIWFQNRRMK KK+
Sbjct: 241 LCLTERQIKIWFQNRRMKWKKD 262
>gi|432925214|ref|XP_004080700.1| PREDICTED: homeobox protein Hox-B5b-like [Oryzias latipes]
gi|74267553|dbj|BAE44275.1| hoxB5b [Oryzias latipes]
gi|83016957|dbj|BAE53482.1| hoxB5b [Oryzias latipes]
Length = 281
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 188 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 242
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 243 LCLSERQIKIWFQNRRMKWKKD 264
>gi|359754098|gb|AEV59520.1| HOXB5 [Macropus eugenii]
Length = 267
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 174 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 228
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 229 LCLSERQIKIWFQNRRMKWKKD 250
>gi|123204408|gb|ABM73547.1| homeodomain protein [Megalobrama amblycephala]
Length = 214
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM+ S+ G KR R Y+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 125 IYPWMR-KLHISHGNLAGPEGKRPRTAYTRFQTLELEKEFHFNRYLTRRRRIEIAHTLCL 183
Query: 317 TERQIKIWFQNRRMKLKKE 335
+ERQIKIWFQNRRMK KK+
Sbjct: 184 SERQIKIWFQNRRMKWKKD 202
>gi|390178647|ref|XP_001359214.3| ftz [Drosophila pseudoobscura pseudoobscura]
gi|388859530|gb|EAL28359.3| ftz [Drosophila pseudoobscura pseudoobscura]
Length = 467
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 205 EMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCS--VSSQQDHEGEDGA-----TL 257
E V G PP + S SP V+ + + VS + +H A
Sbjct: 210 EYVAGTPPPLASTPATPTSIVEGISTPPQSPGVKSATASNVSHEINHRIVTAANSGVAAE 269
Query: 258 YPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 317
+ W + + CK +KR+RQTY+RYQTLELEKEFH+N+Y++R+RR++IA+ L L+
Sbjct: 270 FNWSHIEESLASDCK---DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLS 326
Query: 318 ERQIKIWFQNRRMKLKKEKIV 338
ERQIKIWFQNRRMK KK++ +
Sbjct: 327 ERQIKIWFQNRRMKSKKDRTL 347
>gi|297715929|ref|XP_002834296.1| PREDICTED: homeobox protein Hox-B4 [Pongo abelii]
Length = 251
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|158702268|gb|ABW77467.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 183 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 237
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 238 LCLSERQIKIWFQNRRMKWKKD 259
>gi|213511991|ref|NP_001133046.1| homeobox protein HoxB8aa [Salmo salar]
gi|157816083|gb|ABV82060.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQS---------AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQ+KIWFQNRRMK K+E
Sbjct: 185 TERQVKIWFQNRRMKWKRE 203
>gi|213513586|ref|NP_001133002.1| homeobox protein HoxC4aa [Salmo salar]
gi|157815946|gb|ABV81992.1| homeobox protein HoxC4aa [Salmo salar]
gi|158702316|gb|ABW77509.1| homeobox protein HoxC4aa [Salmo salar]
Length = 269
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +Y+ G +KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIA
Sbjct: 135 VVYPWMKKIHISTANPNYN---GADSKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIA 191
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 HTLVLSERQIKIWFQNRRMKWKKD 215
>gi|71981493|ref|NP_001021164.1| Protein LIN-39 [Caenorhabditis elegans]
gi|462537|sp|P34684.1|LIN39_CAEEL RecName: Full=Homeobox protein lin-39; AltName: Full=Abnormal cell
lineage protein 39
gi|304328|gb|AAB04137.1| homeobox protein [Caenorhabditis elegans]
gi|304332|gb|AAC37168.1| homeobox protein [Caenorhabditis elegans]
gi|351021329|emb|CCD63594.1| Protein LIN-39 [Caenorhabditis elegans]
Length = 253
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 61/90 (67%), Gaps = 7/90 (7%)
Query: 248 DHEGEDGATLYPWMKSNQDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRK 305
D + G +YPWM TGG G KR R Y+R Q LELEKEFH +KYL+RK
Sbjct: 139 DMDKNSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRK 193
Query: 306 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 194 RRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223
>gi|297465048|ref|XP_002703634.1| PREDICTED: homeobox protein Hox-D8 [Bos taurus]
gi|297471596|ref|XP_002685357.1| PREDICTED: homeobox protein Hox-D8 [Bos taurus]
gi|296490678|tpg|DAA32791.1| TPA: homeobox D8-like [Bos taurus]
Length = 277
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 11/104 (10%)
Query: 235 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLE 291
PD + S + DH + + ++PWM+ + G +R RQTYSR+QTLE
Sbjct: 147 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLE 198
Query: 292 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 199 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 242
>gi|13273315|ref|NP_076920.1| homeobox protein Hox-B4 [Homo sapiens]
gi|547692|sp|P17483.2|HXB4_HUMAN RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6; AltName: Full=Homeobox protein Hox-2F
gi|11138934|gb|AAG31554.1|AF287967_4 homeobox B4 [Homo sapiens]
gi|12007115|gb|AAG45052.1| HOXB4 [Homo sapiens]
gi|29351568|gb|AAH49204.1| Homeobox B4 [Homo sapiens]
gi|119615148|gb|EAW94742.1| homeobox B4 [Homo sapiens]
Length = 251
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|299473903|gb|ADJ18234.1| Hox5 protein [Gibbula varia]
Length = 267
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 257 LYPWMKSNQDASYSCKTGGG-NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 315
+YPW Q YS +KRSR +Y+R+QTLELEKEFHYNKYL+R+RRIEIAH L
Sbjct: 163 IYPWKTKTQ---YSADGNDADSKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALN 219
Query: 316 LTERQIKIWFQNRRMKLKKE 335
LTERQIKIWFQNRRMK KK+
Sbjct: 220 LTERQIKIWFQNRRMKWKKD 239
>gi|114666360|ref|XP_001173043.1| PREDICTED: homeobox protein Hox-B4 [Pan troglodytes]
gi|397514562|ref|XP_003827550.1| PREDICTED: homeobox protein Hox-B4 [Pan paniscus]
Length = 251
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 248 DHEGEDGATLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 303
H +YPWM+ S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYA---GGEPKRSRTAYTRQQVLELEKEFHYNRYLT 188
Query: 304 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
R+RR+EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 189 RRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 220
>gi|21389051|gb|AAM50460.1|AF393444_1 Diva [Sacculina carcini]
Length = 393
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
++PWMK Y+ KR+RQ+Y+RYQTLELEKEF N+YL+R+RRIEIA + L
Sbjct: 207 IFPWMK----VPYAVDPCVTAKRTRQSYTRYQTLELEKEFRTNRYLTRRRRIEIARTVAL 262
Query: 317 TERQIKIWFQNRRMKLKKE 335
TERQIKIWFQNRRMK KKE
Sbjct: 263 TERQIKIWFQNRRMKAKKE 281
>gi|444513898|gb|ELV10483.1| Homeobox protein Hox-C8 [Tupaia chinensis]
Length = 242
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQ--QDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + +S Q H ++ + ++PWM+ + G +
Sbjct: 101 GAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAP---------GRRS 151
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 152 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 207
>gi|426226610|ref|XP_004007433.1| PREDICTED: homeobox protein Hox-C4 [Ovis aries]
Length = 214
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 256 TLYPWMKSNQDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 314
+YPWMK ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 84 IVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 143
Query: 315 QLTERQIKIWFQNRRMKLKKE 335
L+ERQIKIWFQNRRMK KK+
Sbjct: 144 CLSERQIKIWFQNRRMKWKKD 164
>gi|189217644|ref|NP_001121270.1| homeobox C8 [Xenopus laevis]
gi|115528658|gb|AAI24878.1| LOC100158353 protein [Xenopus laevis]
Length = 244
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDS--CSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + S Q H ++ + ++PWM+ + G +
Sbjct: 101 GAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWMRPHAP---------GRRS 151
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 152 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 207
>gi|12056969|ref|NP_073149.1| homeobox protein Hox-C8 [Homo sapiens]
gi|13124745|sp|P31273.2|HXC8_HUMAN RecName: Full=Homeobox protein Hox-C8; AltName: Full=Homeobox
protein Hox-3A
gi|11993923|gb|AAG42146.1| HOXC8 [Homo sapiens]
gi|31753106|gb|AAH53898.1| Homeobox C8 [Homo sapiens]
gi|119617149|gb|EAW96743.1| homeobox C8 [Homo sapiens]
gi|158255354|dbj|BAF83648.1| unnamed protein product [Homo sapiens]
gi|208968511|dbj|BAG74094.1| homeobox C8 [synthetic construct]
Length = 242
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQ--QDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + +S Q H ++ + ++PWM+ + G +
Sbjct: 101 GAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAP---------GRRS 151
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 152 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 207
>gi|359323087|ref|XP_849475.2| PREDICTED: uncharacterized protein LOC607625 [Canis lupus
familiaris]
Length = 1280
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDSCSVSSQ--QDHEGEDGAT--LYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + +S Q H ++ + ++PWM+ + G +
Sbjct: 491 GAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPH---------APGRRS 541
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 542 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 597
Score = 104 bits (260), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 5/79 (6%)
Query: 257 LYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 316
+YPWM S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 1198 IYPWMTK---LHMSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 1252
Query: 317 TERQIKIWFQNRRMKLKKE 335
ERQIKIWFQNRRMK KK+
Sbjct: 1253 NERQIKIWFQNRRMKWKKD 1271
>gi|348521444|ref|XP_003448236.1| PREDICTED: homeobox protein Hox-C5a [Oreochromis niloticus]
Length = 227
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 80/121 (66%), Gaps = 7/121 (5%)
Query: 218 RNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGN 277
++G + +D N + V+ + +V+ QD E +YPWM S ++ G
Sbjct: 110 KSGGNMSQESDRNADNTQSVKRNTNVNQPQD--SEQRPQIYPWMT---KLHMSHESEG-- 162
Query: 278 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEKI 337
KRSR +Y+RYQTLELEKEFH+N+YLSR+RRIEIAH L L ERQIKIWFQNRRMK KK+
Sbjct: 163 KRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSK 222
Query: 338 V 338
+
Sbjct: 223 I 223
>gi|258678267|gb|ACV87740.1| central class Hox protein [Convolutriloba longifissura]
Length = 239
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 228 DSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRY 287
D GVG + S H +G+ ++ WM ++ CK R+R Y+R+
Sbjct: 125 DLEGVGGESLTTCHDQISPASHVTTNGSKMFAWM--SKRPPTDCK------RTRTAYTRF 176
Query: 288 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
QTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KK+
Sbjct: 177 QTLELEKEFHFNRYLTRRRRIEIANLLALTERQIKIWFQNRRMKWKKD 224
>gi|213512000|ref|NP_001135145.1| homeobox protein HoxB5aa [Salmo salar]
gi|157816089|gb|ABV82063.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 183 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 237
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 238 LCLSERQIKIWFQNRRMKWKKD 259
>gi|348522365|ref|XP_003448695.1| PREDICTED: homeobox protein Hox-B5b-like [Oreochromis niloticus]
Length = 293
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 200 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 254
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 255 LCLSERQIKIWFQNRRMKWKKD 276
>gi|291389288|ref|XP_002711078.1| PREDICTED: homeobox C4 [Oryctolagus cuniculus]
Length = 264
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +Y+ GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIA
Sbjct: 134 IVYPWMKKIHVSTVNPNYN---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIA 190
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 HSLCLSERQIKIWFQNRRMKWKKD 214
>gi|301762932|ref|XP_002916868.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ailuropoda melanoleuca]
Length = 268
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 175 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 229
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 230 LCLSERQIKIWFQNRRMKWKKD 251
>gi|3335322|gb|AAC27130.1| putative homeobox 2.2 protein [Mus musculus]
Length = 97
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 274 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 333
G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK K
Sbjct: 16 GPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 75
Query: 334 KE 335
KE
Sbjct: 76 KE 77
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 256 TLYPWMK----SNQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 311
+YPWMK S + +YS GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIA
Sbjct: 187 VVYPWMKKIHVSTVNPNYS---GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 243
Query: 312 HELQLTERQIKIWFQNRRMKLKKE 335
H L L+ERQ+KIWFQNRRMK KK+
Sbjct: 244 HTLCLSERQVKIWFQNRRMKWKKD 267
>gi|395532649|ref|XP_003768382.1| PREDICTED: homeobox protein Hox-B5 [Sarcophilus harrisii]
Length = 267
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 8/82 (9%)
Query: 257 LYPWMKS---NQDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 313
++PWM+ + D TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 174 IFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 228
Query: 314 LQLTERQIKIWFQNRRMKLKKE 335
L L+ERQIKIWFQNRRMK KK+
Sbjct: 229 LCLSERQIKIWFQNRRMKWKKD 250
>gi|359754119|gb|AEV59539.1| HOXD8 [Macropus eugenii]
Length = 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 232 VGSPDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNQDASYSCKTGGGNKRSRQTYSRYQ 288
V PD + S + DH + + ++PWM+ + G +R RQTYSR+Q
Sbjct: 175 VQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQ 226
Query: 289 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 227 TLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 273
>gi|55742132|ref|NP_001006787.1| homeobox C8 [Xenopus (Silurana) tropicalis]
gi|49523091|gb|AAH75597.1| homeobox C8 [Xenopus (Silurana) tropicalis]
gi|89267398|emb|CAJ82460.1| homeo box C8 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
Query: 224 GLRADSNGVGSPDVQDS--CSVSSQQDHEGEDGA--TLYPWMKSNQDASYSCKTGGGNKR 279
G + +++ V PD + S + S Q H ++ + ++PWM+ + G +
Sbjct: 101 GAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWMRPHAP---------GRRS 151
Query: 280 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 335
RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 152 GRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 207
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,031,838,564
Number of Sequences: 23463169
Number of extensions: 283925962
Number of successful extensions: 597206
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17231
Number of HSP's successfully gapped in prelim test: 1715
Number of HSP's that attempted gapping in prelim test: 570168
Number of HSP's gapped (non-prelim): 25730
length of query: 339
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 196
effective length of database: 9,003,962,200
effective search space: 1764776591200
effective search space used: 1764776591200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)