BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13592
(321 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312125843|gb|ADQ27865.1| fushi tarazu [Thermobia domestica]
Length = 369
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 94/151 (62%), Gaps = 17/151 (11%)
Query: 147 GFNMDRNGNPVGLRADSNGVGSPD-----VQDSCSVSS-----QQDHEGEDGATLYPWMK 196
G ++ NG V N +G PD VQ V+ QQ G+ A +PWMK
Sbjct: 167 GRDLIANGCKVSSFCAPNNIGVPDSSSLMVQQGFDVTRPLDCLQQPFVGKGPANYFPWMK 226
Query: 197 SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
S D TG G KR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH L L+ERQIK
Sbjct: 227 SYTD------TGHGPKRTRQTYTRFQTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIK 280
Query: 257 IWFQNRRMKLKKEV-LRPNISSTTMLDEKLE 286
IWFQNRRMK KKE+ ++P S D+ LE
Sbjct: 281 IWFQNRRMKAKKEIKMQPQPVSNGTEDDILE 311
>gi|15450325|gb|AAK96032.1| homeodomain transcription factor Fushi tarazu [Tribolium castaneum]
gi|270002804|gb|EEZ99251.1| fushi tarazu [Tribolium castaneum]
Length = 290
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 5/110 (4%)
Query: 173 DSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
D+ + S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+
Sbjct: 150 DNNNFSAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHF 204
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLD 282
NKYL+R+RRIEIA L+LTERQIKIWFQNRRMK KK+ S T+ D
Sbjct: 205 NKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFD 254
>gi|86515424|ref|NP_001034539.1| fushi tarazu [Tribolium castaneum]
gi|13241680|gb|AAK16421.1|AF321227_1 Ftz [Tribolium castaneum]
Length = 290
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 5/110 (4%)
Query: 173 DSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
D+ + S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+
Sbjct: 150 DNNNFSAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHF 204
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLD 282
NKYL+R+RRIEIA L+LTERQIKIWFQNRRMK KK+ S T+ D
Sbjct: 205 NKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFD 254
>gi|541626|gb|AAC46491.1| fushi-tarazu [Tribolium castaneum]
gi|1093401|prf||2103337A fushi tarazu gene
Length = 322
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 5/110 (4%)
Query: 173 DSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
D+ + S++++ E A YPWMK++ D+S GNKR+RQTY+RYQTLELEKEFH+
Sbjct: 150 DNNNFSAEENSVSEPPANFYPWMKAHGDSS-----ATGNKRTRQTYTRYQTLELEKEFHF 204
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLD 282
NKYL+R+RRIEIA L+LTERQIKIWFQNRRMK KK+ S T+ D
Sbjct: 205 NKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFD 254
>gi|225717090|gb|ACO14391.1| Homeobox protein Hox-B7a [Esox lucius]
Length = 215
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
G P SC + Q+ HE D +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 101 GEPSKLTSCGKAEQRQHE--DSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 149
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 150 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 192
>gi|70569917|dbj|BAE06502.1| transcription factor protein [Ciona intestinalis]
Length = 220
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 141 VDGKPPGFNMDR--NGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGED-GATLYPWMKS 197
++ + PG M +GN V +R V SP ++D S + +G D A +YPWMK
Sbjct: 74 INSQHPGHVMQHPFHGNDV-IRDHHGFVTSPSIRDVTERKSDESSDGSDRDAIIYPWMKR 132
Query: 198 NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H +T +KR+R Y+RYQTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKI
Sbjct: 133 IHGG----ETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKI 188
Query: 258 WFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
WFQNRRMK KKE +++S T + L
Sbjct: 189 WFQNRRMKWKKENKLSSLNSVTHVSGPLSG 218
>gi|74096097|ref|NP_001027665.1| Hox 5 [Ciona intestinalis]
gi|2564231|emb|CAA05151.1| Hox 5 [Ciona intestinalis]
Length = 220
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 141 VDGKPPGFNMDR--NGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGED-GATLYPWMKS 197
++ + PG M +GN V +R V SP ++D S + +G D A +YPWMK
Sbjct: 74 INSQHPGHVMQHPFHGNDV-IRDHHGFVTSPSIRDVTERKSDESSDGSDRDAIIYPWMKR 132
Query: 198 NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H +T +KR+R Y+RYQTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKI
Sbjct: 133 IHGG----ETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKI 188
Query: 258 WFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
WFQNRRMK KKE +++S T + L
Sbjct: 189 WFQNRRMKWKKENKLSSLNSVTHVSGPLSG 218
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 40/250 (16%)
Query: 29 TFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKDAKYFAKD-ANSFDKDPAKYYDNF 87
+F P + + PY+ + P + P F + + + ++F + P+K+ N
Sbjct: 327 SFQPQEKFSPYDASFPNQHGAYPITPS------FAFNPHFVQRTHCSTFAQSPSKFGSNL 380
Query: 88 LD-----HNTMNYNHMNAFNQFHMKSNPNHTDYLRTNSDKETLNATNFVPKDEAI-SEMV 141
H +N N + F + + + YL SD +T+ +AI S +
Sbjct: 381 SLRDPNYHALLNTNPACSVAAFRPLLHSDGSTYLSVPSDAVPQISTSLGASLDAIQSGQL 440
Query: 142 DGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNH 199
D P RNG NG G C+ + + G E G +YPWM
Sbjct: 441 DHLSP-----RNG--------MNGGG-------CTTPTGRTASGTTESGVVVYPWMNPK- 479
Query: 200 DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWF 259
G KR+RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L LTERQIKIWF
Sbjct: 480 ----GTDVGADQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWF 535
Query: 260 QNRRMKLKKE 269
QNRRMK KK+
Sbjct: 536 QNRRMKWKKD 545
>gi|312125839|gb|ADQ27863.1| fushi tarazu [Callosobruchus maculatus]
Length = 368
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 80/129 (62%), Gaps = 21/129 (16%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM+S++D T GNKR+RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 207 FYPWMRSSND-----HTAKGNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLCL 261
Query: 251 TERQIKIWFQNRRMKLKK---------EVLRPNISSTTMLDEKLEAPPVFMPAYSAALPK 301
TERQIKIWFQNRRMK KK +V P I M PA S A P
Sbjct: 262 TERQIKIWFQNRRMKAKKGDKLAVPAQQVDFPTIQDVNMNQH-------LYPAMSPATPA 314
Query: 302 ANYDWNGSQ 310
+ Y S+
Sbjct: 315 SYYSCGSSE 323
>gi|224086908|ref|XP_002187141.1| PREDICTED: homeobox protein Hox-B7 isoform 1 [Taeniopygia guttata]
gi|449491428|ref|XP_004174234.1| PREDICTED: homeobox protein Hox-B7 isoform 2 [Taeniopygia guttata]
Length = 217
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 76/104 (73%), Gaps = 12/104 (11%)
Query: 169 PDV-QDSCSVSSQQDH--EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
PD + +CS S Q+D +G+ +YPWM+S TG KR RQTY+RYQTLE
Sbjct: 101 PDASKQNCSKSDQRDADLQGDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLE 151
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 LEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|238822187|gb|ACR58763.1| sex combs reduced [Onthophagus sagittarius]
Length = 298
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + GG KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 207 IYPWMKRVHLGQSTVNANGGTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 266
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 267 TERQIKIWFQNRRMKWKKE 285
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 74/99 (74%), Gaps = 9/99 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+PWMKS D+ G G KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 182 FFPWMKSYTDS------GQGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGL 235
Query: 251 TERQIKIWFQNRRMKLKKE---VLRPNISSTTMLDEKLE 286
TERQIKIWFQNRRMK KKE + PN + ML+E E
Sbjct: 236 TERQIKIWFQNRRMKAKKENKIKVDPNSAEGKMLEEADE 274
>gi|332692497|gb|AEE90176.1| Homeobox B7b [Anguilla anguilla]
Length = 221
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
Query: 166 VGSPDVQDSCSVSSQQD--HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
G P Q SC + Q+D + E +YPWM+S TG KR RQTY+RYQT
Sbjct: 101 TGDPTKQSSCGKAEQRDCVQQDEGNFRIYPWMRS---------TGVDRKRGRQTYTRYQT 151
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 152 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 197
>gi|213512172|ref|NP_001135146.1| homeobox protein HoxB7ab [Salmo salar]
gi|157816105|gb|ABV82071.1| homeobox protein HoxB7ab [Salmo salar]
gi|158702278|gb|ABW77476.1| homeobox protien HoxB7ab [Salmo salar]
Length = 223
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 11/111 (9%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
G P +C + Q+ + ED +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 108 GDPSKVSNCGKAEQR--QNEDSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE P SS
Sbjct: 157 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTPGRSS 207
>gi|213512800|ref|NP_001134382.1| Homeobox protein Hox-B7a [Salmo salar]
gi|157816085|gb|ABV82061.1| homeobox protein HoxB7aa [Salmo salar]
gi|158702266|gb|ABW77465.1| homeobox protein HoxB7aa [Salmo salar]
gi|209732842|gb|ACI67290.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223646772|gb|ACN10144.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223672627|gb|ACN12495.1| Homeobox protein Hox-B7a [Salmo salar]
Length = 223
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
G P SC + Q+ + ED +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 108 GDPSKVSSCGKAEQR--QNEDSLRIYPWMRS---------SGADRKRGRQTYTRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 199
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
SP + + + E + YPWMKS D SC+ G KR+RQTY+R QTLELE
Sbjct: 180 SPPAKSPSNTAQSPSLETQKTTNFYPWMKSYTD---SCQ---GQKRTRQTYTRIQTLELE 233
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV-LRPN 274
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE L+P
Sbjct: 234 KEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKKETNLQPT 281
>gi|220898195|gb|ACL81450.1| HoxB7 [Latimeria menadoensis]
Length = 216
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Query: 175 CSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
CS + Q+D E E +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 108 CSKTEQRDSEQQNESNFRIYPWMRS---------TGPDRKRGRQTYTRYQTLELEKEFHY 158
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 85/132 (64%), Gaps = 14/132 (10%)
Query: 150 MDRNGNPVGLRA-DSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTG 208
++ P RA +S+ + SP V + + LYPWMKS+ D T
Sbjct: 3 LNSRATPESTRAVESSVLSSPPV-------TAHTQNPQISKPLYPWMKSHGD------TT 49
Query: 209 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
G KRSRQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 50 PGPKRSRQTYTRYQTLELEKEFHFNQYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKAKK 109
Query: 269 EVLRPNISSTTM 280
E P SS ++
Sbjct: 110 ENKFPISSSNSL 121
>gi|385654490|gb|AFI61989.1| Hox-B7b [Anguilla japonica]
Length = 221
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
G P Q SC + ++D +D +YPWM+S TG KR RQTY+RYQT
Sbjct: 101 TGDPTKQSSCGKAERRDCAQQDEGNFRIYPWMRS---------TGVDRKRGRQTYTRYQT 151
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 152 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 197
>gi|156551123|ref|XP_001603670.1| PREDICTED: hypothetical protein LOC100110062 [Nasonia vitripennis]
Length = 448
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 69/88 (78%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
++E E T +PWMKSN+ + G KR+RQTY+RYQTLELEKEFH+ +YLSRKRR
Sbjct: 243 EYEDEPMPTDFPWMKSNYGSCALDVKRSGQKRTRQTYTRYQTLELEKEFHFCRYLSRKRR 302
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
+EIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 303 VEIAHSLGLTERQIKIWFQNRRMKAKKD 330
>gi|312125841|gb|ADQ27864.1| fushi tarazu [Dermestes maculatus]
Length = 377
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 9/106 (8%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
+P V ++S ++ + T +YPWMK+N +A T G KR+RQTY+RYQT
Sbjct: 206 TPAVIPQDEINSSENISNTNSVTPTNNIYPWMKANAEA-----TNHGGKRTRQTYTRYQT 260
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 261 LELEKEFHFNKYLTRRRRIEIAHALCLSERQIKIWFQNRRMKAKKD 306
>gi|213514274|ref|NP_001135096.1| homeobox protein HoxA4aa [Salmo salar]
gi|157816045|gb|ABV82041.1| homeobox protein HoxA4aa [Salmo salar]
gi|158702224|gb|ABW77443.1| homeobox protein HoxA4aa [Salmo salar]
Length = 253
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 82/123 (66%), Gaps = 8/123 (6%)
Query: 155 NPVGLRADSNGVGSPDVQDSCSVSSQQ---DHEGEDGATLYPWMKSNHDASYSCKTGGGN 211
NPV DS V DV CS++++ +G++ +YPWMK H + + GG
Sbjct: 95 NPV---PDSGAVA--DVSKDCSLATESYSSAQKGKEVPVVYPWMKKVHVVNATYNGGGVP 149
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVL 271
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + LTERQ+KIWFQNRRMK KK+
Sbjct: 150 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKDHK 209
Query: 272 RPN 274
PN
Sbjct: 210 LPN 212
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 6/79 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWMKS D S G KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 FYPWMKSYTDNS------SGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGL 247
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 248 SERQIKIWFQNRRMKAKKE 266
>gi|383849607|ref|XP_003700436.1| PREDICTED: homeobox protein Hox-A5a-like [Megachile rotundata]
Length = 373
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 64/85 (75%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + +YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 255 GSNPPQIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 314
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 315 AHALCLTERQIKIWFQNRRMKWKKE 339
>gi|18307792|gb|AAL67685.1|AF435786_1 antennapedia [Artemia franciscana]
gi|109944938|dbj|BAE96997.1| Antennapedia [Artemia franciscana]
gi|109944944|dbj|BAE97001.1| Antennapedia [Artemia franciscana]
Length = 348
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 156 PVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSR 215
P+ +G G+ D D S +++ G + LYPWMKS + KR R
Sbjct: 224 PISQSQIGSGSGNEDSHDVSSDENEEQGGGSGDSNLYPWMKSQFE----------RKRGR 273
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 274 QTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 327
>gi|109944936|dbj|BAE96996.1| Antennapedia [Artemia franciscana]
gi|109944941|dbj|BAE96999.1| Antennapedia [Artemia franciscana]
Length = 357
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 156 PVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSR 215
P+ +G G+ D D S +++ G + LYPWMKS + KR R
Sbjct: 224 PISQSQIGSGSGNEDSHDVSSDENEEQGGGSGDSNLYPWMKSQFE----------RKRGR 273
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 274 QTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 327
>gi|402899491|ref|XP_003912729.1| PREDICTED: homeobox protein Hox-B7 [Papio anubis]
Length = 217
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 83/131 (63%), Gaps = 21/131 (16%)
Query: 144 KPPGFNM-----DRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSN 198
+P FNM ++N + V + VG+ + +DS D E +YPWM+S
Sbjct: 81 EPSSFNMHCAPFEQNLSGVCPGDSAKAVGAKEQRDS-------DLAAESNFRIYPWMRS- 132
Query: 199 HDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 258
+G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIW
Sbjct: 133 --------SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIW 184
Query: 259 FQNRRMKLKKE 269
FQNRRMK KKE
Sbjct: 185 FQNRRMKWKKE 195
>gi|332692487|gb|AEE90167.1| Homeobox B7a [Anguilla anguilla]
Length = 220
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 166 VGSPDVQDSCSVSSQQD-HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
G P +C + Q D H+ + +YPWM+S TG KR RQTY+RYQTL
Sbjct: 101 AGDPAKHPNCWRADQGDYHQESESFRIYPWMRS---------TGSERKRGRQTYTRYQTL 151
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 ELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKE 196
>gi|291405867|ref|XP_002719358.1| PREDICTED: homeobox B7 [Oryctolagus cuniculus]
Length = 217
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 80/128 (62%), Gaps = 15/128 (11%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDA 201
+P FNM + + +GV D + Q+D + E +YPWM+S
Sbjct: 81 EPSSFNM----HCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---- 132
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 133 -----SGADRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 187
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 188 RRMKWKKE 195
>gi|385654478|gb|AFI61979.1| Hox-B7a [Anguilla japonica]
Length = 220
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 166 VGSPDVQDSCSVSSQQD-HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
G P +C + Q D H+ + +YPWM+S TG KR RQTY+RYQTL
Sbjct: 101 AGDPAKHPNCWRADQGDYHQESESFRIYPWMRS---------TGSERKRGRQTYTRYQTL 151
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 152 ELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKE 196
>gi|169259788|ref|NP_001108563.1| homeobox protein Hox-B7a [Danio rerio]
gi|60392411|sp|Q8AWY9.1|HXB7A_DANRE RecName: Full=Homeobox protein Hox-B7a; Short=Hox-B7
gi|26984635|emb|CAD59112.1| SI:dZ254O17.2 (homeo box protein B7a) [Danio rerio]
gi|190338728|gb|AAI63357.1| Homeo box B7a [Danio rerio]
gi|190339800|gb|AAI63361.1| Homeo box B7a [Danio rerio]
Length = 227
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 9/84 (10%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E+ +YPWM+S TG KR RQTYSRYQTLELEKEFH+N+YLSR+RRIEIA
Sbjct: 129 ENNLRIYPWMRS---------TGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIA 179
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 180 HALCLTERQIKIWFQNRRMKWKKE 203
>gi|301612429|ref|XP_002935718.1| PREDICTED: homeobox protein Hox-D4a-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301612431|ref|XP_002935719.1| PREDICTED: homeobox protein Hox-D4a-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 198
+P G + +G P A +P S SQQ H G+ A +YPWMK
Sbjct: 74 QPRGQTQEPSGPPEPFPAAEEHCPAPANLSSSRACSQQQHPKNGSLGKPPAIVYPWMKKV 133
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 134 HCNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKI 193
Query: 258 WFQNRRMKLKKEVLRPN 274
WFQNRRMK KK+ PN
Sbjct: 194 WFQNRRMKWKKDHKLPN 210
>gi|201023305|ref|NP_001128396.1| sex combs reduced [Nasonia vitripennis]
Length = 390
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 64/85 (75%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + +YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 272 GGNPPQIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 331
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 332 AHALCLTERQIKIWFQNRRMKWKKE 356
>gi|31205335|ref|XP_311616.1| AGAP004659-PA [Anopheles gambiae str. PEST]
gi|3420834|gb|AAC31944.1| Sex combs reduced homeotic protein [Anopheles gambiae]
gi|30177656|gb|EAA07257.2| AGAP004659-PA [Anopheles gambiae str. PEST]
Length = 372
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 260 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 319
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 320 TERQIKIWFQNRRMKWKKE 338
>gi|449277036|gb|EMC85343.1| Homeobox protein Hox-B7 [Columba livia]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 11/97 (11%)
Query: 175 CSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
CS + Q+D + + + +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 108 CSKTDQRDSDLQSDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHY 158
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|426237815|ref|XP_004012853.1| PREDICTED: homeobox protein Hox-B7 [Ovis aries]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|296476456|tpg|DAA18571.1| TPA: homeobox protein Hox-B7 [Bos taurus]
gi|440910522|gb|ELR60316.1| Homeobox protein Hox-B7 [Bos grunniens mutus]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|148232956|ref|NP_001084118.1| homeobox protein Hox-B7-B [Xenopus laevis]
gi|67678245|gb|AAH97639.1| Hoxb7 protein [Xenopus laevis]
Length = 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 171 VQDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
+ +C+ + Q+D E + A L YPWM+S G KR RQTY+RYQTLELEK
Sbjct: 105 TKQNCTKAEQRDSELHNEANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEK 155
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 156 EFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>gi|123274|sp|P04476.1|HXB7B_XENLA RecName: Full=Homeobox protein Hox-B7-B; AltName: Full=P52;
AltName: Full=XlHbox-2 B
gi|64748|emb|CAA29814.1| unnamed protein product [Xenopus laevis]
Length = 220
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 171 VQDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
+ +C+ + Q+D E + A L YPWM+S G KR RQTY+RYQTLELEK
Sbjct: 105 TKQNCTKAEQRDSELHNEANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEK 155
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 156 EFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>gi|410980865|ref|XP_003996794.1| PREDICTED: homeobox protein Hox-B7 [Felis catus]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|357623860|gb|EHJ74850.1| sex combs reduced-like protein [Danaus plexippus]
Length = 336
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 224 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 284 TERQIKIWFQNRRMKWKKE 302
>gi|301762934|ref|XP_002916869.1| PREDICTED: homeobox protein Hox-B7-like [Ailuropoda melanoleuca]
gi|281344383|gb|EFB19967.1| hypothetical protein PANDA_005014 [Ailuropoda melanoleuca]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|194899151|ref|XP_001979124.1| GG10180 [Drosophila erecta]
gi|190650827|gb|EDV48082.1| GG10180 [Drosophila erecta]
Length = 467
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 354 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 413
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 414 TERQIKIWFQNRRMKWKKE 432
>gi|395826620|ref|XP_003786515.1| PREDICTED: homeobox protein Hox-B7 [Otolemur garnettii]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|73966250|ref|XP_851221.1| PREDICTED: homeobox protein Hox-B7 [Canis lupus familiaris]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|297715941|ref|XP_002834301.1| PREDICTED: homeobox protein Hox-B7 [Pongo abelii]
Length = 217
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|165873665|gb|ABY67957.1| lox5 hox protein [Capitella teleta]
gi|443689508|gb|ELT91882.1| hypothetical protein CAPTEDRAFT_168125 [Capitella teleta]
Length = 284
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ A + G KR+RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH LQL
Sbjct: 164 IYPWMRPLSGADF----GYEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALQL 219
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 220 TERQIKIWFQNRRMKYKKE 238
>gi|195568828|ref|XP_002102414.1| GD19518 [Drosophila simulans]
gi|194198341|gb|EDX11917.1| GD19518 [Drosophila simulans]
Length = 463
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 350 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 409
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 410 TERQIKIWFQNRRMKWKKE 428
>gi|798833|emb|CAA54348.1| unnamed protein product [Drosophila melanogaster]
Length = 417
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>gi|431890744|gb|ELK01623.1| Homeobox protein Hox-B7 [Pteropus alecto]
Length = 217
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 74/108 (68%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV + D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCAGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|311267496|ref|XP_003131597.1| PREDICTED: homeobox protein Hox-B7-like [Sus scrofa]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|195498914|ref|XP_002096729.1| GE25827 [Drosophila yakuba]
gi|194182830|gb|EDW96441.1| GE25827 [Drosophila yakuba]
Length = 419
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 306 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 365
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 366 TERQIKIWFQNRRMKWKKE 384
>gi|426347608|ref|XP_004041441.1| PREDICTED: homeobox protein Hox-B7 [Gorilla gorilla gorilla]
gi|146324926|sp|A1YFA5.1|HXB7_GORGO RecName: Full=Homeobox protein Hox-B7
gi|120975055|gb|ABM46823.1| HOXB7 [Gorilla gorilla]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|334323085|ref|XP_003340341.1| PREDICTED: homeobox protein Hox-B7-like [Monodelphis domestica]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query: 173 DSCSVSSQQDHEGEDGAT-----LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
DS S +D D A +YPWM+S TG KR RQTY+RYQTLELE
Sbjct: 103 DSAKAGSGKDQRESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELE 153
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 154 KEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|338227733|gb|AEI91062.1| sex combs reduced [Onthophagus binodis]
Length = 300
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 218 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 278 TERQIKIWFQNRRMKWKKE 296
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
D G+ +YPWM+SN+ C G +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 127 DDGGKSSTVIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 181 IEIAHALGLTERQIKIWFQNRRMKWKKE 208
>gi|109114195|ref|XP_001088822.1| PREDICTED: homeobox protein Hox-B7 [Macaca mulatta]
gi|355568484|gb|EHH24765.1| hypothetical protein EGK_08480 [Macaca mulatta]
gi|355753959|gb|EHH57924.1| hypothetical protein EGM_07669 [Macaca fascicularis]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|27805921|ref|NP_776767.1| homeobox protein Hox-B7 [Bos taurus]
gi|18203484|sp|Q9TT89.1|HXB7_BOVIN RecName: Full=Homeobox protein Hox-B7
gi|6573100|gb|AAF17552.1|AF200721_1 homeodomain-containing transcription factor [Bos taurus]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|332847298|ref|XP_511938.3| PREDICTED: homeobox protein Hox-B7 [Pan troglodytes]
gi|397514568|ref|XP_003827553.1| PREDICTED: homeobox protein Hox-B7 [Pan paniscus]
gi|410210976|gb|JAA02707.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210978|gb|JAA02708.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210980|gb|JAA02709.1| homeobox B7 [Pan troglodytes]
gi|410247334|gb|JAA11634.1| homeobox B7 [Pan troglodytes]
gi|410247336|gb|JAA11635.1| homeobox B7 [Pan troglodytes]
gi|410334655|gb|JAA36274.1| homeobox B7 [Pan troglodytes]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|296202579|ref|XP_002748518.1| PREDICTED: homeobox protein Hox-B7 [Callithrix jacchus]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAEGNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|86515396|ref|NP_001034523.1| cephalothorax [Tribolium castaneum]
gi|13241681|gb|AAK16422.1|AF321227_2 Scr [Tribolium castaneum]
gi|270002805|gb|EEZ99252.1| sex combs reduced [Tribolium castaneum]
Length = 312
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|7229537|gb|AAF42868.1|AF227628_1 sex combs reduced Scr [Tribolium castaneum]
gi|54607266|gb|AAL26542.2| cephalothorax [Tribolium castaneum]
gi|54607268|gb|AAL27023.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|403279485|ref|XP_003931280.1| PREDICTED: homeobox protein Hox-B7 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAEGNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|260835435|ref|XP_002612714.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
gi|160421813|gb|ABX39490.1| AmphiHox6 [Branchiostoma floridae]
gi|229298093|gb|EEN68723.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
Length = 227
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 3/90 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
TERQIKIWFQNRRMK KKE P++++TT+
Sbjct: 174 TERQIKIWFQNRRMKWKKENKIPSLNATTI 203
>gi|157124731|ref|XP_001660497.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873901|gb|EAT38126.1| AAEL009949-PA [Aedes aegypti]
Length = 370
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 258 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 317
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 318 TERQIKIWFQNRRMKWKKE 336
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
D G+ +YPWM+SN+ C G +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 129 DDGGKTSTVIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 182
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 183 IEIAHALGLTERQIKIWFQNRRMKWKKE 210
>gi|217035828|gb|ACJ74384.1| Hox6 [Branchiostoma lanceolatum]
Length = 227
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 3/90 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
TERQIKIWFQNRRMK KKE P++++TT+
Sbjct: 174 TERQIKIWFQNRRMKWKKENKIPSLNATTI 203
>gi|24644694|ref|NP_524248.2| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45553277|ref|NP_996165.1| Sex combs reduced, isoform B [Drosophila melanogaster]
gi|68067436|sp|P09077.5|SCR_DROME RecName: Full=Homeotic protein Sex combs reduced
gi|4389425|gb|AAD19795.1| homeodomain protein [Drosophila melanogaster]
gi|7298875|gb|AAF54082.1| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45446383|gb|AAS65103.1| Sex combs reduced, isoform B [Drosophila melanogaster]
Length = 417
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>gi|194217070|ref|XP_001918206.1| PREDICTED: homeobox protein Hox-B7-like [Equus caballus]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAETNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|359754100|gb|AEV59522.1| HOXB7 [Macropus eugenii]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Query: 180 QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
+ D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+
Sbjct: 115 ESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRR 165
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 166 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|15929847|gb|AAH15345.1| Homeobox B7 [Homo sapiens]
gi|60816679|gb|AAX36392.1| homeobox B7 [synthetic construct]
gi|61358381|gb|AAX41558.1| homeobox B7 [synthetic construct]
gi|61359764|gb|AAX41764.1| homeobox B7 [synthetic construct]
gi|119615131|gb|EAW94725.1| homeobox B7, isoform CRA_a [Homo sapiens]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|344285925|ref|XP_003414710.1| PREDICTED: homeobox protein Hox-B7-like [Loxodonta africana]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|54607270|gb|AAL23667.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 260 TERQIKIWFQNRRMKWKKE 278
>gi|291290871|ref|NP_001167466.1| homeobox D4 [Xenopus laevis]
gi|83405607|gb|AAI10766.1| Unknown (protein for MGC:131092) [Xenopus laevis]
Length = 237
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 8/151 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 198
+P G + +G A + +P S SQQ H G+ A +YPWMK
Sbjct: 74 QPRGHAQEPSGPQEPFAAADDHCPAPATLSSSRGCSQQQHPKNGTLGKPPAIVYPWMKKV 133
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 134 HVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKI 193
Query: 258 WFQNRRMKLKKEVLRPNIS--STTMLDEKLE 286
WFQNRRMK KK+ PN ST+ L + ++
Sbjct: 194 WFQNRRMKWKKDHKLPNTKGRSTSSLSQHIQ 224
>gi|85068580|ref|NP_004493.3| homeobox protein Hox-B7 [Homo sapiens]
gi|311033482|sp|P09629.4|HXB7_HUMAN RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein HHO.C1; AltName: Full=Homeobox protein Hox-2C
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|60828272|gb|AAX36836.1| homeobox B7 [synthetic construct]
gi|61368483|gb|AAX43187.1| homeobox B7 [synthetic construct]
gi|61369779|gb|AAX43390.1| homeobox B7 [synthetic construct]
Length = 218
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|390351573|ref|XP_003727685.1| PREDICTED: homeobox protein Hox-A6-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 77/116 (66%), Gaps = 7/116 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGG-GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
+G+ +YPWM+ H + + + G +KRSR Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 164 KGQTNEQIYPWMRRIHSTTAAAQNGTEPSKRSRTAYTRYQTLELEKEFHFNRYLTRRRRI 223
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNIS------STTMLDEKLEAPPVFM 292
EIAH L LTERQIKIWFQNRRMK KKE +IS + L APP M
Sbjct: 224 EIAHALGLTERQIKIWFQNRRMKWKKEHNVKSISQLISQEAAANLAGATVAPPSVM 279
>gi|395532653|ref|XP_003768384.1| PREDICTED: homeobox protein Hox-B7 [Sarcophilus harrisii]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Query: 180 QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
+ D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+
Sbjct: 115 ESDLAAESNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRR 165
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 166 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|15825440|gb|AAL09697.1| cephalothorax [Tribolium castaneum]
Length = 268
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 156 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 216 TERQIKIWFQNRRMKWKKE 234
>gi|194742008|ref|XP_001953501.1| GF17789 [Drosophila ananassae]
gi|190626538|gb|EDV42062.1| GF17789 [Drosophila ananassae]
Length = 378
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 245 GAPPQGMMHQGQGPSQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 296
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 297 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|158254738|dbj|BAF83342.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|327275818|ref|XP_003222669.1| PREDICTED: homeobox protein Hox-B7-like [Anolis carolinensis]
Length = 219
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
D E +YPWM+S TG KR RQTY+RYQTLELEKEFHYN+YL+R+RR
Sbjct: 119 DQRDESNLRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRR 169
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 170 IEIAHALCLTERQIKIWFQNRRMKWKKE 197
>gi|390178649|ref|XP_001359213.3| Scr [Drosophila pseudoobscura pseudoobscura]
gi|388859531|gb|EAL28358.3| Scr [Drosophila pseudoobscura pseudoobscura]
Length = 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 313 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 372
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 373 TERQIKIWFQNRRMKWKKE 391
>gi|45553285|ref|NP_996169.1| antennapedia, isoform F [Drosophila melanogaster]
gi|45553291|ref|NP_996172.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446387|gb|AAS65107.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446388|gb|AAS65108.1| antennapedia, isoform F [Drosophila melanogaster]
Length = 365
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 228 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 279
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 280 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 335
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 336 RMKWKKE 342
>gi|195038415|ref|XP_001990655.1| GH19477 [Drosophila grimshawi]
gi|193894851|gb|EDV93717.1| GH19477 [Drosophila grimshawi]
Length = 576
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 313 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 372
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 373 TERQIKIWFQNRRMKWKKE 391
>gi|287635|emb|CAA32637.1| unnamed protein product [Drosophila melanogaster]
Length = 415
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 302 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 361
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 362 TERQIKIWFQNRRMKWKKE 380
>gi|520616|emb|CAA84518.1| Hox-6 homeodomain protein [Branchiostoma floridae]
gi|745778|prf||2016458E Hox-6 gene
Length = 227
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 3/90 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 117 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 173
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
TERQIKIWFQNRRMK KKE P++++TT+
Sbjct: 174 TERQIKIWFQNRRMKWKKENKIPSLNATTI 203
>gi|297591838|gb|ADI46796.1| RE64079p [Drosophila melanogaster]
Length = 378
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 292
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|45553281|ref|NP_996167.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45553283|ref|NP_996168.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45553287|ref|NP_996170.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45553297|ref|NP_996175.1| antennapedia, isoform M [Drosophila melanogaster]
gi|123317|sp|P02833.1|ANTP_DROME RecName: Full=Homeotic protein antennapedia
gi|156947|gb|AAA28376.1| Antennapedia differentiation protein [Drosophila melanogaster]
gi|156949|gb|AAA70214.1| antennapedia protein [Drosophila melanogaster]
gi|156951|gb|AAA70216.1| antennapedia protein [Drosophila melanogaster]
gi|1805742|emb|CAA27417.1| antennapedia protein [Drosophila melanogaster]
gi|4389423|gb|AAD19793.1| homeodomain protein [Drosophila melanogaster]
gi|45446391|gb|AAS65111.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45446392|gb|AAS65112.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45446393|gb|AAS65113.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45446394|gb|AAS65114.1| antennapedia, isoform M [Drosophila melanogaster]
gi|224976|prf||1205216A gene Antp
Length = 378
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 292
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 349 RMKWKKE 355
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 243 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 302
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 303 TERQIKIWFQNRRMKWKKE 321
>gi|51390|emb|CAA29934.1| unnamed protein product [Mus musculus]
gi|861031|emb|CAA68494.1| 2.3 gene product [Mus musculus]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDAAKAGGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|225581119|gb|ACN94690.1| GA10228 [Drosophila miranda]
Length = 345
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 232 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 291
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 292 TERQIKIWFQNRRMKWKKE 310
>gi|195344079|ref|XP_002038616.1| GM10524 [Drosophila sechellia]
gi|194133637|gb|EDW55153.1| GM10524 [Drosophila sechellia]
Length = 525
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 353 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 412
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 413 TERQIKIWFQNRRMKWKKE 431
>gi|354474762|ref|XP_003499599.1| PREDICTED: homeobox protein Hox-B7-like [Cricetulus griseus]
Length = 217
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|45553279|ref|NP_996166.1| antennapedia, isoform K [Drosophila melanogaster]
gi|45553293|ref|NP_996173.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446385|gb|AAS65105.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446386|gb|AAS65106.1| antennapedia, isoform K [Drosophila melanogaster]
Length = 361
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 228 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 279
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 280 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 331
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 332 RMKWKKE 338
>gi|213511004|ref|NP_001133041.1| homeobox protein HoxA4an [Salmo salar]
gi|157816065|gb|ABV82051.1| homeobox protein HoxA4an [Salmo salar]
gi|158702244|gb|ABW77453.1| homeobox protein HoxA4ab [Salmo salar]
Length = 246
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 80/110 (72%), Gaps = 8/110 (7%)
Query: 170 DVQDSCSVSSQQ---DHEGEDGATLYPWMKSNH--DASYSCKTGGGNKRSRQTYSRYQTL 224
DV +CS++++ +G++ +YPWMK H +ASYS GG KRSR Y+R Q L
Sbjct: 105 DVSKACSLATESYPGAQKGKEPPVVYPWMKKVHVVNASYS---GGVPKRSRTAYTRQQAL 161
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
ELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 162 ELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPN 211
>gi|195110413|ref|XP_001999776.1| GI24715 [Drosophila mojavensis]
gi|193916370|gb|EDW15237.1| GI24715 [Drosophila mojavensis]
Length = 418
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 305 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 364
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 365 TERQIKIWFQNRRMKWKKE 383
>gi|170029593|ref|XP_001842676.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863995|gb|EDS27378.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 375
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 263 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 322
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 323 TERQIKIWFQNRRMKWKKE 341
>gi|45553289|ref|NP_996171.1| antennapedia, isoform N [Drosophila melanogaster]
gi|45553295|ref|NP_996174.1| antennapedia, isoform D [Drosophila melanogaster]
gi|195344085|ref|XP_002038619.1| GM10522 [Drosophila sechellia]
gi|195568836|ref|XP_002102418.1| GD19515 [Drosophila simulans]
gi|45446389|gb|AAS65109.1| antennapedia, isoform D [Drosophila melanogaster]
gi|45446390|gb|AAS65110.1| antennapedia, isoform N [Drosophila melanogaster]
gi|194133640|gb|EDW55156.1| GM10522 [Drosophila sechellia]
gi|194198345|gb|EDX11921.1| GD19515 [Drosophila simulans]
Length = 374
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 292
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 344
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 345 RMKWKKE 351
>gi|195498909|ref|XP_002096727.1| GE25826 [Drosophila yakuba]
gi|194182828|gb|EDW96439.1| GE25826 [Drosophila yakuba]
Length = 375
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 242 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 293
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 294 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 345
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 346 RMKWKKE 352
>gi|194899155|ref|XP_001979126.1| antp [Drosophila erecta]
gi|190650829|gb|EDV48084.1| antp [Drosophila erecta]
Length = 374
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 16/127 (12%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S +
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE-- 292
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 --------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 344
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 345 RMKWKKE 351
>gi|66476106|gb|AAX63753.2| HoxA4aii [Oncorhynchus mykiss]
Length = 250
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 13/125 (10%)
Query: 155 NPVGLRADSNGVGSPDVQDSCSVSSQQ---DHEGEDGATLYPWMKSNH--DASYSCKTGG 209
NPV DS V DV CS++++ +G++ +YPWMK H +A+Y+ GG
Sbjct: 95 NPV---PDSGAVA--DVSKDCSLATESYSSAQKGKEVPVVYPWMKKVHVVNATYN---GG 146
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + LTERQ+KIWFQNRRMK KK+
Sbjct: 147 VPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKD 206
Query: 270 VLRPN 274
PN
Sbjct: 207 HKLPN 211
>gi|255742447|gb|ACU32561.1| homeobox protein HoxB7 [Callorhinchus milii]
Length = 211
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 86/133 (64%), Gaps = 14/133 (10%)
Query: 148 FNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGE-DGATLYPWMKSNHDASYSCK 206
FNM + + + G G + SCS S +D + + + +YPWMKS
Sbjct: 83 FNMHCSSFDQNISSLMCGAGD-SYKQSCSKSELRDTDSQSENFRIYPWMKS--------- 132
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 133 SASDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 192
Query: 267 KKE---VLRPNIS 276
KKE +++P+ S
Sbjct: 193 KKESKAMVQPDAS 205
>gi|148684077|gb|EDL16024.1| homeobox B7 [Mus musculus]
Length = 217
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|62945316|ref|NP_001017480.1| homeobox protein Hox-B7 [Rattus norvegicus]
gi|83303676|sp|P18864.2|HXB7_RAT RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein R1B
gi|51259417|gb|AAH79340.1| Homeo box B7 [Rattus norvegicus]
gi|149053981|gb|EDM05798.1| homeobox protein [Rattus norvegicus]
Length = 219
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTERKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|195152067|ref|XP_002016960.1| GL22040 [Drosophila persimilis]
gi|194112017|gb|EDW34060.1| GL22040 [Drosophila persimilis]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 315 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 374
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 375 TERQIKIWFQNRRMKWKKE 393
>gi|88014652|ref|NP_034590.2| homeobox protein Hox-B7 [Mus musculus]
gi|114152821|sp|P09024.2|HXB7_MOUSE RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein Hox-2.3; AltName: Full=Homeobox protein MH-22B;
AltName: Full=Homeobox protein MuB1
gi|147897801|gb|AAI40345.1| Homeo box B7 [synthetic construct]
Length = 217
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|195446501|ref|XP_002070807.1| GK10826 [Drosophila willistoni]
gi|194166892|gb|EDW81793.1| GK10826 [Drosophila willistoni]
Length = 428
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 300 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 359
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 360 TERQIKIWFQNRRMKWKKE 378
>gi|112983646|ref|NP_001037339.1| sex combs reduced homolog [Bombyx mori]
gi|4589701|dbj|BAA76868.1| Scr [Bombyx mori]
Length = 356
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 244 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 303
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 304 TERQIKIWFQNRRMKWKKE 322
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 230 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 289
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 290 TERQIKIWFQNRRMKWKKE 308
>gi|444517712|gb|ELV11730.1| Homeobox protein Hox-B7 [Tupaia chinensis]
Length = 163
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 80/128 (62%), Gaps = 15/128 (11%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDA 201
+P FNM + + +GV D + Q+D + E +YPWM+S
Sbjct: 27 EPSSFNM----HCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---- 78
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 79 -----SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 133
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 134 RRMKWKKE 141
>gi|194742014|ref|XP_001953504.1| GF17790 [Drosophila ananassae]
gi|190626541|gb|EDV42065.1| GF17790 [Drosophila ananassae]
Length = 447
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 303 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 362
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 363 TERQIKIWFQNRRMKWKKE 381
>gi|363743430|ref|XP_003642838.1| PREDICTED: homeobox protein Hox-B7 [Gallus gallus]
Length = 217
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 72/97 (74%), Gaps = 11/97 (11%)
Query: 175 CSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
C+ + Q+D + + + +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 108 CNKTDQRDSDLQSDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHY 158
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|213513838|ref|NP_001133031.1| homeobox protein HoxD4ab [Salmo salar]
gi|157816029|gb|ABV82033.1| homeobox protein HoxD4ab [Salmo salar]
gi|158702378|gb|ABW77564.1| homeobox protein HoxD4ab [Salmo salar]
Length = 236
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G R+ NP A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHVQGRDSNPSTFTAQTEPCAPVQVTGPRTCGQQQNTKNQNGIQAKQPAVVYPWMKK 131
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
+H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 192 IWFQNRRMKWKKDHKLPN 209
>gi|295393193|gb|ADG03457.1| LD21370p [Drosophila melanogaster]
Length = 276
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 163 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 222
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 223 TERQIKIWFQNRRMKWKKE 241
>gi|397911066|gb|AFO68809.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 215
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 68/88 (77%), Gaps = 3/88 (3%)
Query: 193 PWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L LTE
Sbjct: 112 PWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 168
Query: 253 RQIKIWFQNRRMKLKKEVLRPNISSTTM 280
RQIKIWFQNRRMK KKE P++++TT+
Sbjct: 169 RQIKIWFQNRRMKWKKENKIPSLNATTI 196
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G+ +YPWM+SN+ C G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 128 GKTPTIIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 181
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 182 AHTLGLTERQIKIWFQNRRMKWKKE 206
>gi|328480244|gb|AEB15973.1| ultrabithorax isoform IV [Oncopeltus fasciatus]
Length = 295
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 150 MDRNGNPVGLRADSNGVGSPDVQDSCSVSSQ------QDHEGEDGATLYPWMKSNHDASY 203
+ +G+P + S+ +P + CS+++ Q H+ T YPWM
Sbjct: 145 LGGDGSPGAVSRTSSASLAPASWNQCSLNTTATQPAGQLHQQPANHTFYPWMAI------ 198
Query: 204 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 263
G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 199 -AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 257
Query: 264 MKLKKEV 270
MKLKKE+
Sbjct: 258 MKLKKEI 264
>gi|170649680|gb|ACB21265.1| homeobox A7 (predicted) [Callicebus moloch]
Length = 229
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|301128885|emb|CBL59348.1| HoxB7 [Scyliorhinus canicula]
Length = 211
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 11/123 (8%)
Query: 148 FNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGE-DGATLYPWMKSNHDASYSCK 206
FNM + + + G G + +CS S Q++ + + + +YPWMKS
Sbjct: 83 FNMHCSSFDHNISSLMCGAGD-SCKQTCSKSEQREADPQSENFRIYPWMKS--------- 132
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 133 SASDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 192
Query: 267 KKE 269
KKE
Sbjct: 193 KKE 195
>gi|4322040|gb|AAD15930.1| homeobox protein [Petromyzon marinus]
gi|429510506|gb|AFZ94991.1| transcription factor Hox6 [Petromyzon marinus]
Length = 248
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 171 VQDSCSVSSQQDHEGEDGATLYPWMK--SNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
V + S+SS +E + +YPWM+ ++H+ G +R RQTYSRYQTLELEK
Sbjct: 123 VGGAHSLSSPSPYEHKQTVPIYPWMQRMNSHNG---LGLGTDRRRGRQTYSRYQTLELEK 179
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNIS 276
EFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE P++S
Sbjct: 180 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHNIPSLS 227
>gi|344249137|gb|EGW05241.1| Homeobox protein Hox-B7 [Cricetulus griseus]
Length = 153
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 80/128 (62%), Gaps = 15/128 (11%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDA 201
+P FNM + + +GV D + Q+D + E +YPWM+S
Sbjct: 17 EPSSFNM----HCAPFEQNLSGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---- 68
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 69 -----SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 123
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 124 RRMKWKKE 131
>gi|270065291|gb|ACZ60640.1| sex combs reduced [Oncopeltus fasciatus]
Length = 302
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 253
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 254 TERQIKIWFQNRRMKWKKE 272
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGSAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGSAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|262263017|gb|ACY39977.1| HoxD4 [Heterodontus francisci]
Length = 238
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 115 YLRTNSDKETLNATNFVPKDEAISEMVDGKP-PGFNMDRNGNPVGLRADSNGVGSPDVQD 173
Y R+N ++ N +N V +P P ++ G PV S +G P Q
Sbjct: 49 YPRSNYSGQSYNCSNARGSPVQQRGHVQAQPAPQNHLTGQGEPVAPLQVS--IGRPCSQQ 106
Query: 174 SCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHY 232
+ +Q + A +YPWMK H + + TGG KRSR Y+R Q LELEKEFH+
Sbjct: 107 QHNPKNQNGTATKQPAVVYPWMKKIHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHF 166
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN +
Sbjct: 167 NRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKT 211
>gi|147900428|ref|NP_001079110.1| homeobox protein Hox-B7-A [Xenopus laevis]
gi|3023938|sp|Q91771.1|HXB7A_XENLA RecName: Full=Homeobox protein Hox-B7-A; AltName: Full=MM3;
AltName: Full=XlHbox-2 A
gi|530987|gb|AAA49754.1| homeobox protein [Xenopus laevis]
gi|50415073|gb|AAH77970.1| Hbox2-A protein [Xenopus laevis]
Length = 220
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 75/106 (70%), Gaps = 12/106 (11%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
G P Q+S + + Q++ E + A L YPWM+S G KR RQTY+RYQT
Sbjct: 103 AGDPTKQNS-AKAEQRESELHNEANLRIYPWMRS---------AGADRKRGRQTYTRYQT 152
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 LELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWKKE 198
>gi|207452734|ref|NP_001129067.1| homeobox protein Hox-A7 [Pan troglodytes]
gi|146324919|sp|A2T7F3.1|HXA7_PANTR RecName: Full=Homeobox protein Hox-A7
gi|124111397|gb|ABM92108.1| HOXA7 [Pan troglodytes]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|294610346|dbj|BAJ05331.1| homeotic protein Sex combs reduced [Daphnia magna]
Length = 444
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 330 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 389
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 390 SERQIKIWFQNRRMKWKKE 408
>gi|397472859|ref|XP_003807951.1| PREDICTED: homeobox protein Hox-A7 [Pan paniscus]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|410215418|gb|JAA04928.1| homeobox A7 [Pan troglodytes]
gi|410339189|gb|JAA38541.1| homeobox A7 [Pan troglodytes]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|88604714|gb|ABD46728.1| homeobox protein sex comb reduced [Endeis spinosa]
Length = 265
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
D P+ QDS S+S ++ +YPWM+ H G KR R +Y+RY
Sbjct: 138 DPRSTSPPNSQDSKSIS-------QNTPQIYPWMRKVHIGQNGISNGMETKRQRTSYTRY 190
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE
Sbjct: 191 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKE 238
>gi|297680780|ref|XP_002818146.1| PREDICTED: homeobox protein Hox-A7 [Pongo abelii]
Length = 230
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|24497556|ref|NP_008827.2| homeobox protein Hox-A7 [Homo sapiens]
gi|311033439|sp|P31268.3|HXA7_HUMAN RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox 1.1; AltName: Full=Homeobox protein Hox-1A
gi|51094977|gb|EAL24221.1| homeo box A7 [Homo sapiens]
gi|119614283|gb|EAW93877.1| homeobox A7 [Homo sapiens]
gi|147897929|gb|AAI40402.1| Homeobox A7 [synthetic construct]
gi|151555121|gb|AAI48693.1| Homeobox A7 [synthetic construct]
Length = 230
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|345780283|ref|XP_864678.2| PREDICTED: homeobox protein Hox-A7 isoform 5 [Canis lupus
familiaris]
Length = 239
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|403287989|ref|XP_003935200.1| PREDICTED: homeobox protein Hox-A7 [Saimiri boliviensis
boliviensis]
Length = 229
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNISGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|149705657|ref|XP_001499535.1| PREDICTED: homeobox protein Hox-A7-like [Equus caballus]
Length = 234
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|184185536|gb|ACC68937.1| homeobox protein Hox-A7 (predicted) [Rhinolophus ferrumequinum]
Length = 232
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|62526075|dbj|BAD95554.1| Hoxb-7 [Gallus gallus]
Length = 145
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 72/97 (74%), Gaps = 11/97 (11%)
Query: 175 CSVSSQQDHEGEDGA--TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
C+ + Q+D + + + +YPWM+S TG KR RQTY+RYQTLELEKEFHY
Sbjct: 36 CNKTDQRDSDLQSDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQTLELEKEFHY 86
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 87 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 123
>gi|321475844|gb|EFX86806.1| LOW QUALITY PROTEIN: putative homeotic Sex combs reduced protein
[Daphnia pulex]
Length = 440
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 326 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 385
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 386 SERQIKIWFQNRRMKWKKE 404
>gi|296209379|ref|XP_002751497.1| PREDICTED: homeobox protein Hox-A7 [Callithrix jacchus]
gi|167427229|gb|ABZ80210.1| homeobox A7 (predicted) [Callithrix jacchus]
Length = 230
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCTSYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|397911068|gb|AFO68810.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 144
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ S G KR RQTY+RYQTLELEKEFH+NKYL+RKRRIEIAH L L
Sbjct: 34 VFPWMR---KGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGL 90
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
TERQIKIWFQNRRMK KKE P++++T +
Sbjct: 91 TERQIKIWFQNRRMKWKKENKIPSLNATAI 120
>gi|327275816|ref|XP_003222668.1| PREDICTED: homeobox protein Hox-B6-like [Anolis carolinensis]
Length = 231
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 84/133 (63%), Gaps = 7/133 (5%)
Query: 143 GKPPGFNMDRNGNPVGLRA--DSNGVGSPDVQDS-CSVSSQQDHEGED---GATLYPWMK 196
G PPGF ++ + L + D G + S CS S + +D +YPWM+
Sbjct: 80 GTPPGFYREKETSACSLSSLDDPAQFGQESGRKSDCSQSKHVFGDSDDQKCSTPVYPWMQ 139
Query: 197 SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
+ + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIK
Sbjct: 140 RMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 198
Query: 257 IWFQNRRMKLKKE 269
IWFQNRRMK KKE
Sbjct: 199 IWFQNRRMKWKKE 211
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 6/81 (7%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+SN+ C G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 135 TVIYPWMRSNN----YC--GSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 188
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 189 GLTERQIKIWFQNRRMKWKKE 209
>gi|62898059|dbj|BAD96969.1| homeo box B7 variant [Homo sapiens]
Length = 217
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLEL KEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELGKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQ+KIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|505633|gb|AAA19240.1| sex combs reduced homeodomain protein [Drosophila melanogaster]
Length = 415
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 302 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 361
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQ+RRMK KKE
Sbjct: 362 TERQIKIWFQDRRMKWKKE 380
>gi|195446505|ref|XP_002070809.1| GK10824 [Drosophila willistoni]
gi|194166894|gb|EDW81795.1| GK10824 [Drosophila willistoni]
Length = 374
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 29/124 (23%)
Query: 165 GVGSPDVQD--SCSVSSQQDHEGEDG-----------------ATLYPWMKSNHDASYSC 205
GVG+P Q Q H+G G + LYPWM+S +
Sbjct: 238 GVGAPGPQGMMHAGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFE----- 292
Query: 206 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 265
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 293 -----RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 347
Query: 266 LKKE 269
KKE
Sbjct: 348 WKKE 351
>gi|254212175|gb|ACT65750.1| Hoxa7 [Leucoraja erinacea]
Length = 208
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
IAH L LTERQIKIWFQNRRMK KKE + S+TT +EK E
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKETKAGSSSTTT--EEKQE 208
>gi|328778440|ref|XP_623903.2| PREDICTED: homeotic protein Sex combs reduced [Apis mellifera]
Length = 380
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + +Y WMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 262 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 321
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 322 AHALCLTERQIKIWFQNRRMKWKKE 346
>gi|309313|gb|AAA37833.1| hox-1.1 peptide [Mus musculus]
Length = 229
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|410896924|ref|XP_003961949.1| PREDICTED: homeobox protein Hox-D4a-like [Takifugu rubripes]
Length = 274
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSN 198
P G D++G P A + V + QQ+ + ++G A +YPWMK
Sbjct: 113 PRGHVHDKSGQPSPFNAQTESGAPVLVAGPRTCGQQQNTKSQNGTQAKQPAVVYPWMKKV 172
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 173 HVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 232
Query: 258 WFQNRRMKLKKEVLRPN 274
WFQNRRMK KK+ PN
Sbjct: 233 WFQNRRMKWKKDHKLPN 249
>gi|198453463|ref|XP_002137673.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132367|gb|EDY68231.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 80/128 (62%), Gaps = 17/128 (13%)
Query: 143 GKPPGFNMDRN-GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDA 201
G PP M + G P + +G +P Q+ S SS + LYPWM+S +
Sbjct: 258 GAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE- 310
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 311 ---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 361
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 362 RRMKWKKE 369
>gi|195152057|ref|XP_002016955.1| GL22036 [Drosophila persimilis]
gi|194112012|gb|EDW34055.1| GL22036 [Drosophila persimilis]
Length = 395
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 80/128 (62%), Gaps = 17/128 (13%)
Query: 143 GKPPGFNMDRN-GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDA 201
G PP M + G P + +G +P Q+ S SS + LYPWM+S +
Sbjct: 261 GAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFE- 313
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 314 ---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 364
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 365 RRMKWKKE 372
>gi|311275740|ref|XP_003134888.1| PREDICTED: homeobox protein Hox-A7-like [Sus scrofa]
Length = 234
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADDGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|350405517|ref|XP_003487459.1| PREDICTED: hypothetical protein LOC100747162 [Bombus impatiens]
Length = 372
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + +Y WMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 254 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 313
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 314 AHALCLTERQIKIWFQNRRMKWKKE 338
>gi|340727747|ref|XP_003402198.1| PREDICTED: hypothetical protein LOC100643224 [Bombus terrestris]
Length = 372
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + +Y WMK H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 254 GNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 313
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 314 AHALCLTERQIKIWFQNRRMKWKKE 338
>gi|359754088|gb|AEV59511.1| HOXA7 [Macropus eugenii]
Length = 227
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 13/103 (12%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
GS + ++ ++ SQ E +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 98 GSCEKAEASALHSQ----AETNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLEL 144
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 145 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|301128873|emb|CBL59337.1| HoxA7 [Scyliorhinus canicula]
Length = 208
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 11/103 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
IAH L LTERQIKIWFQNRRMK KKE + S+TT +EK E
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKETKAGSSSTTT--EEKQE 208
>gi|327280468|ref|XP_003224974.1| PREDICTED: homeobox protein Hox-A7-like [Anolis carolinensis]
Length = 254
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 130 QAESNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 180
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 181 IAHALCLTERQIKIWFQNRRMKWKKE 206
>gi|6754234|ref|NP_034585.1| homeobox protein Hox-A7 [Mus musculus]
gi|1346331|sp|P02830.2|HXA7_MOUSE RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox-1.1; AltName: Full=Homeobox protein M6-12;
Short=M6
gi|664758|gb|AAC52160.1| Hoxa7 [Mus musculus]
gi|26329169|dbj|BAC28323.1| unnamed protein product [Mus musculus]
gi|124297803|gb|AAI31979.1| Homeo box A7 [Mus musculus]
gi|124376130|gb|AAI32644.1| Homeo box A7 [Mus musculus]
gi|148666246|gb|EDK98662.1| homeobox A7, isoform CRA_c [Mus musculus]
Length = 229
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|158711670|ref|NP_001102703.2| homeobox protein Hox-A7 [Rattus norvegicus]
gi|392347330|ref|XP_003749804.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
gi|392356117|ref|XP_003752229.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
Length = 229
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ S + G KR+RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 177 IYPWMRP---MSGVAEFGFEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 234 TERQIKIWFQNRRMKWKKE 252
>gi|391337014|ref|XP_003742869.1| PREDICTED: uncharacterized protein LOC100904659 [Metaseiulus
occidentalis]
Length = 330
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 192 YPWMKS----NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
YPWMK D C T KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 204 YPWMKGYAPNTADGQGGCPTSA-PKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 262
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KKE
Sbjct: 263 LCLSERQIKIWFQNRRMKAKKE 284
>gi|18858835|ref|NP_571193.1| homeobox protein Hox-B4a [Danio rerio]
gi|60392407|sp|P22574.3|HXB4A_DANRE RecName: Full=Homeobox protein Hox-B4a; Short=Hox-B4; AltName:
Full=Homeobox protein Zf-13
gi|4322072|gb|AAD15945.1| homeobox protein [Danio rerio]
gi|190337053|gb|AAI62840.1| Homeo box B4a [Danio rerio]
gi|190337059|gb|AAI62844.1| Homeo box B4a [Danio rerio]
Length = 246
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLEL 226
+P Q++ +VSS++D +YPWMK H S +GG KRSR Y+R Q LEL
Sbjct: 113 TPTSQNTSTVSSRKD------PVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLEL 166
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
EKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 167 EKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 214
>gi|34395628|sp|Q24645.1|ANTP_DROSU RecName: Full=Homeotic protein antennapedia
gi|829192|emb|CAA43307.1| Antp [Drosophila subobscura]
Length = 394
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 297 SPLYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 350
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 351 CLTERQIKIWFQNRRMKWKKE 371
>gi|345312910|ref|XP_001511383.2| PREDICTED: homeobox protein Hox-B7-like [Ornithorhynchus anatinus]
Length = 222
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 73/111 (65%), Gaps = 15/111 (13%)
Query: 165 GVGSPDVQDSCSVSS--QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G G + CS + + D G+ +YPWM+S TG KR RQTY+RYQ
Sbjct: 99 GPGGDSAKPDCSKAGPRESDLAGDSNFRIYPWMRS---------TGTDRKRGRQTYTRYQ 149
Query: 223 TLEL----EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLEL EKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 150 TLELGEGLEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 200
>gi|149633997|ref|XP_001509365.1| PREDICTED: homeobox protein Hox-A7-like [Ornithorhynchus anatinus]
Length = 224
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|26984638|emb|CAD59115.1| SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio]
Length = 244
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 13/111 (11%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNH----DASYSCKTGGGNKRSRQTYSRYQT 223
+P Q++ +VSS++D +YPWMK H +YS GG KRSR Y+R Q
Sbjct: 111 TPTSQNTSTVSSRKD------PVVYPWMKKVHVNIVSPNYS---GGEPKRSRTAYTRQQV 161
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 162 LELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 212
>gi|255742444|gb|ACU32558.1| homeobox protein HoxB4 [Callorhinchus milii]
Length = 243
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 6/117 (5%)
Query: 168 SPDVQDSCS-VSSQQDHEGEDGATLYPWMKSNHD--ASYSCKTGGGNKRSRQTYSRYQTL 224
+P SCS V+S Q+ +YPWMK H + +CK GG KRSR Y+R Q L
Sbjct: 101 TPSPPPSCSQVTSNQNTSCSKEPVVYPWMKKVHINIVNPNCK-GGEMKRSRTAYTRQQVL 159
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN--ISSTT 279
ELEKEFH+N+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN I STT
Sbjct: 160 ELEKEFHFNRYLTRRRRVEIAHNLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSTT 216
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 12/121 (9%)
Query: 164 NGV-GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
NG+ G+ S +V+SQ D + +YPWM+ H +S G KRSR Y+RYQ
Sbjct: 113 NGMNGTEKNTSSNAVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQ 164
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLD 282
TLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE N+ S + L
Sbjct: 165 TLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE---HNVKSISQLM 221
Query: 283 E 283
E
Sbjct: 222 E 222
>gi|21389049|gb|AAM50459.1|AF393443_1 antennapedia [Sacculina carcini]
Length = 369
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 12/95 (12%)
Query: 177 VSSQQDHEGEDGA--TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 234
+++QQ + G+ L+PWM++ D KR RQTY+RYQTLELEKEFH+N+
Sbjct: 262 LNAQQQPPSQAGSPNVLFPWMRTQFD----------RKRGRQTYTRYQTLELEKEFHFNR 311
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 312 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 346
>gi|167013293|pdb|2R5Y|A Chain A, Structure Of ScrEXD COMPLEX BOUND TO A CONSENSUS HOX-Exd
Site
gi|167013297|pdb|2R5Z|A Chain A, Structure Of ScrEXD COMPLEX BOUND TO A DNA SEQUENCE
Derived From The Fkh Gene
Length = 88
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 8 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSL 67
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 68 TERQIKIWFQNRRMKWKKE 86
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 148 FNMDRNGNPVGLRADSNGVG--SPDVQD-SCSVSSQQDHEGEDGATLYPWMKSNHDASYS 204
F D++G R S G+ SP Q+ S + E + +YPWM+ + S
Sbjct: 77 FLQDKDGGLASCRQTSRGLNAQSPSAQEYSLDHARGGSQEQKANVQIYPWMQRMNSHS-G 135
Query: 205 CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRM 264
G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRM
Sbjct: 136 VGFGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRM 195
Query: 265 KLKKEVLRPNISSTTMLDEKLEA 287
K KKE + ++ST E A
Sbjct: 196 KWKKESI---LTSTVTGSESTGA 215
>gi|334349107|ref|XP_003342150.1| PREDICTED: homeobox protein Hox-A7-like [Monodelphis domestica]
Length = 226
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 13/103 (12%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
GS + ++ ++ SQ E +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 98 GSCEKAEASALHSQ----AETNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLEL 144
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 145 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|14916597|sp|Q9IA25.1|HXA7_HETFR RecName: Full=Homeobox protein Hox-A7
gi|7271834|gb|AAF44645.1|AF224262_7 HoxA7 [Heterodontus francisci]
Length = 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 11/103 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
IAH L LTERQIKIWFQNRRMK KKE SS+T +EK E
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKET--KAGSSSTTSEEKQE 208
>gi|395540360|ref|XP_003772123.1| PREDICTED: homeobox protein Hox-A7 [Sarcophilus harrisii]
Length = 226
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 13/103 (12%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
GS + ++ ++ SQ D +YPWM+S +G KR RQTY+RYQTLEL
Sbjct: 98 GSCEKAEASALHSQAD----TNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLEL 144
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 145 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|344285927|ref|XP_003414711.1| PREDICTED: homeobox protein Hox-B6-like [Loxodonta africana]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
+ E + A +YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 117 ETEEQKCSAPVYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 175
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 176 RIEIAHALCLTERQIKIWFQNRRMKWKKE 204
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Query: 174 SCSVSSQQDHEGEDGAT------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+ S+S QQ + A+ LYPWM+S + KR RQTY+RYQTLELE
Sbjct: 238 ASSLSQQQQGAPQSAASSNLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELE 287
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 288 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 329
>gi|380014422|ref|XP_003691231.1| PREDICTED: homeotic protein antennapedia-like [Apis florea]
Length = 350
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 256 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 305
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 306 CLTERQIKIWFQNRRMKWKKE 326
>gi|49169787|ref|NP_989926.1| homeobox protein Hox-A7 [Gallus gallus]
gi|363730028|ref|XP_003640750.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|363730175|ref|XP_003640779.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|60392400|sp|Q90VZ9.1|HXA7_CHICK RecName: Full=Homeobox protein Hox-A7
gi|15553502|gb|AAL01899.1|AF408695_1 homeodomain transcription factor HoxA-7 [Gallus gallus]
gi|13872753|emb|CAC37629.1| Hoxa-7 protein [Gallus gallus]
Length = 219
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 11/108 (10%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
SV+SQ D + +YPWM+ H +S G KRSR Y+RYQTLELEKEFH+N+Y
Sbjct: 124 SVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQTLELEKEFHFNRY 175
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDE 283
L+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE N+ S + L E
Sbjct: 176 LTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE---HNVKSISQLME 220
>gi|217035832|gb|ACJ74387.1| Hox8 [Branchiostoma lanceolatum]
Length = 213
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 62/80 (77%), Gaps = 9/80 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM++ G +R RQTYSRYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 118 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGL 168
Query: 251 TERQIKIWFQNRRMKLKKEV 270
TERQIKIWFQNRRMKLKKE
Sbjct: 169 TERQIKIWFQNRRMKLKKEA 188
>gi|217035829|gb|ACJ74385.1| Hox5 [Branchiostoma lanceolatum]
Length = 287
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 76/118 (64%), Gaps = 11/118 (9%)
Query: 161 ADSNGVGSPDVQDSCSVSSQ---------QDHEGEDGATLYPWMKSNHDASYSCKTGGGN 211
D VGSP+ + + S Q +YPWM+ H ++S TG N
Sbjct: 153 VDLESVGSPNATATAAGSVQPSNNNTANNTASTSPSNIPMYPWMRKIH-LNHSAGTGD-N 210
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 211 KRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 268
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ + +C + + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCGDLAKGACDKADEGTLHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|14916600|sp|Q9PWD2.1|HXA4_MORSA RecName: Full=Homeobox protein Hox-A4
gi|5669605|gb|AAD46399.1|AF089743_5 homeodomain protein Hox-A4 [Morone saxatilis]
Length = 248
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCK-TGGGNKRSR 215
L A +G + CS++S+ G +YPWMK H ++ + TGG KRSR
Sbjct: 94 LTAAPDGGAGANASKDCSLASEVYPGVAKGKEPVVYPWMKKVHVSTVNASYTGGVPKRSR 153
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 154 TAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 212
>gi|217035833|gb|ACJ74388.1| Hox7 [Branchiostoma lanceolatum]
Length = 236
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 147 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 197
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 198 TERQIKIWFQNRRMKWKKE 216
>gi|160421815|gb|ABX39492.1| AmphiHox8 [Branchiostoma floridae]
Length = 212
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 68/102 (66%), Gaps = 9/102 (8%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
P Q ++ + + YPWM++ G +R RQTYSRYQTLELEK
Sbjct: 94 PSCQQEEKTATMGMAQSQLAIPFYPWMRT---------AGPERRRGRQTYSRYQTLELEK 144
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
EFH+NKYL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE
Sbjct: 145 EFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEA 186
>gi|224813652|gb|ACN65055.1| homeo box B4a [Megalobrama amblycephala]
Length = 246
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLEL 226
+P Q++ +V+S++D +YPWMK H S +GG KRSR Y+R Q LEL
Sbjct: 113 TPTSQNTSTVTSRKD------PVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLEL 166
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
EKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 167 EKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 214
>gi|254212177|gb|ACT65752.1| Hoxa5 [Leucoraja erinacea]
Length = 275
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 164 NGVG-SPDVQDSCSVSS----QQDHEG--EDGATLYPWMKSNHDASYSCKTGGGNKRSRQ 216
+GVG SP +D SS Q+ +G + +YPWM+ H S+ G KR+R
Sbjct: 147 DGVGTSPGTEDDTPASSDPPSSQNGQGTAQQQPQIYPWMRKLH-ISHDSMGGPEGKRART 205
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 258
>gi|34398398|gb|AAQ67266.1| antennapedia [Drosophila virilis]
Length = 380
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 283 SPLYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 336
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 337 CLTERQIKIWFQNRRMKWKKE 357
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE-----GEDGATLYPWMKSN 198
+P G + +G A + +P S SQQ H G+ A +YPWMK
Sbjct: 55 QPRGHAQEPSGPQEPFAAADDHCPAPATLSSSRGCSQQQHPKNGTLGKPPAIVYPWMKKV 114
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+E QIKI
Sbjct: 115 HVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSECQIKI 174
Query: 258 WFQNRRMKLKKEVLRPNIS--STTMLDEKLE 286
WFQNRRMK KK+ PN ST+ L + ++
Sbjct: 175 WFQNRRMKWKKDHKLPNTKGRSTSSLSQHIQ 205
>gi|405109808|emb|CCH51006.1| antennapedia, partial [Phalangium opilio]
Length = 206
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 10/91 (10%)
Query: 179 SQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
+Q + G + LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R
Sbjct: 103 AQTPNSGSLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTR 152
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 RRRIEIAHALCLTERQIKIWFQNRRMKWKKE 183
>gi|66476105|gb|AAX63752.2| HoxA4ai [Oncorhynchus mykiss]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 77/105 (73%), Gaps = 8/105 (7%)
Query: 170 DVQDSCSVSSQ---QDHEGEDGATLYPWMKSNH--DASYSCKTGGGNKRSRQTYSRYQTL 224
DV CS++++ +G++ +YPWMK H +ASYS GG KRSR Y+R Q L
Sbjct: 105 DVSKDCSLATECYPGAQKGKEPPVVYPWMKKVHVVNASYS---GGVPKRSRTAYTRQQAL 161
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 162 ELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 206
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
H+ + +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 103 HQPDSHFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 153
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 154 EIAHALCLTERQIKIWFQNRRMKWKKE 180
>gi|58585092|ref|NP_001011571.1| homeobox protein H90 [Apis mellifera]
gi|9967824|emb|CAC06383.1| Antennapedia protein [Apis mellifera]
Length = 352
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 307
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|148666245|gb|EDK98661.1| homeobox A7, isoform CRA_b [Mus musculus]
Length = 223
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 84 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 134
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 135 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 181
>gi|351704297|gb|EHB07216.1| Homeobox protein Hox-A7 [Heterocephalus glaber]
Length = 232
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G S + +C + + G E +YPWM+S
Sbjct: 71 GLGPDAYGNLPCASYDQNIPGFCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|449268334|gb|EMC79203.1| Homeobox protein Hox-A7 [Columba livia]
Length = 219
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEPNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|18079282|ref|NP_536748.1| ultrabithorax, isoform B [Drosophila melanogaster]
gi|7300190|gb|AAF55356.1| ultrabithorax, isoform B [Drosophila melanogaster]
Length = 346
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 17/127 (13%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 245
Query: 204 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 263
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 246 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 304
Query: 264 MKLKKEV 270
MKLKKE+
Sbjct: 305 MKLKKEI 311
>gi|74203747|dbj|BAE23104.1| unnamed protein product [Mus musculus]
Length = 217
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQT +RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTSTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>gi|220898183|gb|ACL81439.1| HoxA7 [Latimeria menadoensis]
Length = 212
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 9/92 (9%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E+ +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 115 ENNFRIYPWMRS---------SGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 165
Query: 246 HELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
H L LTERQIKIWFQNRRMK KKE N +S
Sbjct: 166 HALCLTERQIKIWFQNRRMKWKKEHKEDNFTS 197
>gi|969088|gb|AAA84410.1| UBXIVA [Drosophila melanogaster]
Length = 346
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 17/127 (13%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 245
Query: 204 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 263
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 246 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 304
Query: 264 MKLKKEV 270
MKLKKE+
Sbjct: 305 MKLKKEI 311
>gi|119370799|sp|Q1KKS8.1|HXD4A_FUGRU RecName: Full=Homeobox protein Hox-D4a
gi|94482851|gb|ABF22466.1| homeobox protein HoxD4a [Takifugu rubripes]
Length = 233
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSN 198
P G D++G P A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 PRGHVHDKSGQPSPFNAQTESGAPVLVAGPRTCGQQQNTKSQNGTQAKQPAVVYPWMKKV 131
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 132 HVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 191
Query: 258 WFQNRRMKLKKEVLRPN 274
WFQNRRMK K+ PN
Sbjct: 192 WFQNRRMKWTKDHKLPN 208
>gi|86515340|ref|NP_001034497.1| ultrabithorax [Tribolium castaneum]
gi|18535622|gb|AAL71874.1| ultrabithorax [Tribolium castaneum]
gi|270002802|gb|EEZ99249.1| ultrabithorax [Tribolium castaneum]
Length = 314
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 140 MVDGKP---PGFNMDRNGNPVGLR--ADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPW 194
+V G P PG R GN + N S V + Q +H T YPW
Sbjct: 157 LVGGDPASSPGAAAGRTGNSLSWNNPCSINSTSSQPV--GTQIHQQTNH------TFYPW 208
Query: 195 MKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 254
M ++ G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQ
Sbjct: 209 MAIADSMTFGAN--GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 266
Query: 255 IKIWFQNRRMKLKKEV 270
IKIWFQNRRMKLKKE+
Sbjct: 267 IKIWFQNRRMKLKKEI 282
>gi|160421814|gb|ABX39491.1| AmphiHox7 [Branchiostoma floridae]
Length = 236
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 147 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 197
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 198 TERQIKIWFQNRRMKWKKE 216
>gi|410934527|gb|AFV93980.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 272
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ NH A G NKR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 184 MYPWMRKIRLNHSAGT-----GDNKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 238
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L LTERQIKIWFQNRRMK KKE
Sbjct: 239 LCLTERQIKIWFQNRRMKWKKE 260
>gi|109944934|dbj|BAE96995.1| Antennapedia [Moina macrocopa]
Length = 528
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 9/85 (10%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G+ + LYPWM+S KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEI
Sbjct: 430 GDQDSPLYPWMRSQFAE---------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEI 480
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 481 AHALCLTERQIKIWFQNRRMKWKKE 505
>gi|224045306|ref|XP_002194801.1| PREDICTED: homeobox protein Hox-A7 [Taeniopygia guttata]
Length = 219
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEPNFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|195570298|ref|XP_002103144.1| ultrabithorax [Drosophila simulans]
gi|194199071|gb|EDX12647.1| ultrabithorax [Drosophila simulans]
Length = 338
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 17/127 (13%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM
Sbjct: 185 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAI------ 237
Query: 204 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 263
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRR
Sbjct: 238 -AGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 296
Query: 264 MKLKKEV 270
MKLKKE+
Sbjct: 297 MKLKKEI 303
>gi|74267555|dbj|BAE44276.1| hoxB6b [Oryzias latipes]
gi|83016956|dbj|BAE53481.1| hoxB6b [Oryzias latipes]
Length = 231
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 33/154 (21%)
Query: 161 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 192
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 80 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQTVSMSSSIDDKSSTLIY 139
Query: 193 PWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
PWM+ + +C G G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 140 PWMQRMN----ACSAGDG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 194
Query: 253 RQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
RQIKIWFQNRRMK KKE N S T +E+ E
Sbjct: 195 RQIKIWFQNRRMKWKKENKLLNPSKTPEEEEQAE 228
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 10/80 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 270 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 319
Query: 251 TERQIKIWFQNRRMKLKKEV 270
TERQIKIWFQNRRMK KKE
Sbjct: 320 TERQIKIWFQNRRMKWKKET 339
>gi|284005071|ref|NP_001164873.1| homeobox protein Hox-A7 [Oryctolagus cuniculus]
gi|217418309|gb|ACK44311.1| homeobox A7 (predicted) [Oryctolagus cuniculus]
Length = 235
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ + +C + + G E +YPWM+S
Sbjct: 71 GLGTDAYGNLPCASYDQNIPGLCGDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|193620095|ref|XP_001947187.1| PREDICTED: homeotic protein antennapedia-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 10/102 (9%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P +Q + + Q + + LYPWM+S + KR RQTY+RYQTLELE
Sbjct: 275 TPPLQTPTAQNQQAVNNNSLPSPLYPWMRSQFE----------RKRGRQTYTRYQTLELE 324
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 325 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 366
>gi|58382029|ref|XP_311618.2| AGAP004660-PA [Anopheles gambiae str. PEST]
gi|3420836|gb|AAC31945.1| Antennapedia homeotic protein [Anopheles gambiae]
gi|55242653|gb|EAA07256.2| AGAP004660-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 234 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 284 TERQIKIWFQNRRMKWKKE 302
>gi|195389692|ref|XP_002053510.1| antennapedia [Drosophila virilis]
gi|194151596|gb|EDW67030.1| antennapedia [Drosophila virilis]
Length = 376
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 283 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 332
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 333 CLTERQIKIWFQNRRMKWKKE 353
>gi|431909016|gb|ELK12607.1| Homeobox protein Hox-A7 [Pteropus alecto]
Length = 232
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 77/127 (60%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + G E +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKVDEGALHGPAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLPRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|400180325|gb|AFP73293.1| Hoxa7alpha [Polyodon spathula]
Length = 210
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 74/105 (70%), Gaps = 9/105 (8%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
+H+ E +YPWM++ +GG KR RQ Y+RYQTLELEKEFH+++YL+R+RR
Sbjct: 111 NHQSEGHFEMYPWMRT---------SGGDGKRGRQNYTRYQTLELEKEFHFSRYLTRRRR 161
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
+EIAH L LTERQIKIWFQNRRMK KKE + N + T + K E
Sbjct: 162 VEIAHALCLTERQIKIWFQNRRMKWKKEHMDKNSNPRTTTEVKDE 206
>gi|383849609|ref|XP_003700437.1| PREDICTED: uncharacterized protein LOC100877385 [Megachile
rotundata]
Length = 536
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 296 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 355
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAA 298
L L+ERQIKIWFQNRRMK KK+ PN + + +A P P+ S A
Sbjct: 356 TLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKNANGQAAPASKPSKSQA 407
>gi|397911070|gb|AFO68811.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 222
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S T KR RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 139 IYPWMRS---------TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCL 189
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 190 TERQIKIWFQNRRMKWKKE 208
>gi|449277039|gb|EMC85346.1| Homeobox protein Hox-B4, partial [Columba livia]
Length = 225
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGA---TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQ 222
G+P SCS +S +YPWMK H ++ + +GG KRSR Y+R Q
Sbjct: 102 GTPSPPPSCSQNSLNQSPASSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQ 161
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 162 VLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|6918885|emb|CAA59270.1| HOX 1.1 (A7) [Homo sapiens]
Length = 229
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|195038411|ref|XP_001990653.1| GH19475 [Drosophila grimshawi]
gi|193894849|gb|EDV93715.1| GH19475 [Drosophila grimshawi]
Length = 385
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 292 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 341
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 342 CLTERQIKIWFQNRRMKWKKE 362
>gi|58382033|ref|XP_311624.2| AGAP004661-PB [Anopheles gambiae str. PEST]
gi|3420832|gb|AAC31943.1| Ultrabithorax homeotic protein IVa [Anopheles gambiae]
gi|55242654|gb|EAA07259.2| AGAP004661-PB [Anopheles gambiae str. PEST]
Length = 310
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
Query: 142 DGKPPGFNMDRNGNPV---GLRADSNGVGSPDVQDSCSVSSQQDHEG-------EDGATL 191
D + G+ G+PV G A + GV + CS++ + + T
Sbjct: 147 DSRVGGYIDASGGSPVSRAGSAAAATGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LT
Sbjct: 207 YPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLT 259
Query: 252 ERQIKIWFQNRRMKLKKEV 270
ERQIKIWFQNRRMKLKKE+
Sbjct: 260 ERQIKIWFQNRRMKLKKEI 278
>gi|363743428|ref|XP_001236990.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B6-like
[Gallus gallus]
Length = 222
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
+ E + A +YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 115 ESEEQKCSAPVYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 173
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 174 RIEIAHSLCLTERQIKIWFQNRRMKWKKE 202
>gi|307180545|gb|EFN68507.1| Homeotic protein deformed [Camponotus floridanus]
Length = 529
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
T+YPWMK H A S G KR R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 290 TIYPWMKKIHVAGVANGSYTPGMEPKRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAH 349
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV 290
L L+ERQIKIWFQNRRMK KK+ PN + + +APP
Sbjct: 350 NLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKNANGQAPPA 393
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 12/132 (9%)
Query: 170 DVQDSCSVSSQQDH------EGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
D DS SS D EG G+ +YPWMK H + + NKR+R +Y+
Sbjct: 156 DAVDSPGGSSHSDEPQSPTDEGAAGSPNQPHIYPWMKRMHIGHDT--SNADNKRTRTSYT 213
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
R+QTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE +++ +
Sbjct: 214 RHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEHKLAHLAKSQ 273
Query: 280 MLDEKLEAPPVF 291
L P+
Sbjct: 274 AQKLDLHGAPIL 285
>gi|154183857|gb|ABS70795.1| Hoxd4a [Haplochromis burtoni]
Length = 235
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +R +P A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHGHERASHPSHFSAQTEQGTPVQVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 131
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 192 IWFQNRRMKWKKDHKLPN 209
>gi|195110409|ref|XP_001999774.1| GI24713 [Drosophila mojavensis]
gi|193916368|gb|EDW15235.1| GI24713 [Drosophila mojavensis]
Length = 378
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 287 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 336
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 337 TERQIKIWFQNRRMKWKKE 355
>gi|17922001|gb|AAK06846.2| abdominal-A protein [Myrmica rubra]
Length = 394
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 8/102 (7%)
Query: 177 VSSQQDHEGEDGAT---LYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 226 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 285
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 286 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 327
>gi|6166223|sp|O57374.2|HXD4A_DANRE RecName: Full=Homeobox protein Hox-D4a; Short=Hox-D4
gi|27362953|gb|AAN86981.1| homeodomain protein Hoxd4A [Danio rerio]
Length = 236
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 137 ISEMVDG---KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG----- 188
I V G +P G D+ P A + + + S + QQ+ + ++G
Sbjct: 62 ICSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTCGQQQNTKTQNGIPTKQ 121
Query: 189 -ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
A +YPWMK H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIE AH
Sbjct: 122 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAH 181
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 TLSLSERQIKIWFQNRRMKWKKDHKLPN 209
>gi|429510508|gb|AFZ94992.1| transcription factor Hox7 [Petromyzon marinus]
Length = 227
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 7/97 (7%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G +YPWM+S + +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 137 GLRIYPWMRSTAGSP-------DRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHA 189
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
L LTERQIKIWFQNRRMK KKE P ++ ++K
Sbjct: 190 LCLTERQIKIWFQNRRMKWKKEHQNPAAEASASEEKK 226
>gi|224055148|ref|XP_002199292.1| PREDICTED: homeobox protein Hox-D4 [Taeniopygia guttata]
Length = 237
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 15/168 (8%)
Query: 115 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDS 174
Y R+N ++ + +N ++ G+P G +++G + P + +S
Sbjct: 51 YPRSNYSEQPFSCSN--------AQGSAGQPRGHGQEQSGPASHFPGPAEHCPPPPMSNS 102
Query: 175 CSVSSQQDHEGEDG------ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELE 227
+ S Q + +G A +YPWMK H S + GG KRSR Y+R Q LELE
Sbjct: 103 RACSQQPALKPPNGSALKQPAVVYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELE 162
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNI 275
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 163 KEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNT 210
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 76/108 (70%), Gaps = 11/108 (10%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+V+SQ D + +YPWM+ H +S G KRSR Y+RYQTLELEKEFH+N+Y
Sbjct: 124 AVNSQSD------SMVYPWMRKMHMSS--GANGMEAKRSRTAYTRYQTLELEKEFHFNRY 175
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDE 283
L+R+RRIEIAH L L+ERQIKIWFQNRRMK KKE N+ S + L E
Sbjct: 176 LTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKE---HNVKSISQLME 220
>gi|26984636|emb|CAD59113.1| SI:dZ254O17.3 (homeo box protein B6a) [Danio rerio]
gi|190339534|gb|AAI62839.1| Homeo box B6a [Danio rerio]
gi|190339552|gb|AAI62846.1| Homeo box B6a [Danio rerio]
Length = 228
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 72/98 (73%), Gaps = 6/98 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
E + A +YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 125 EQKPSAPVYPWMQRMN----SCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
IEIAH L LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 181 IEIAHALCLTERQIKIWFQNRRMKWKKENKLINCSQTS 218
>gi|18858839|ref|NP_571194.1| homeobox protein Hox-B6a [Danio rerio]
gi|123250|sp|P15861.1|HXB6A_DANRE RecName: Full=Homeobox protein Hox-B6a; Short=Hox-B6; AltName:
Full=Homeobox protein Zf-22
gi|62536|emb|CAA48319.1| homeodomain protein [Danio rerio]
gi|313688|emb|CAA35171.1| Hox 2.2 [Danio rerio]
Length = 228
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 72/98 (73%), Gaps = 6/98 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
E + A +YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 125 EQKPSAPVYPWMQRMN----SCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
IEIAH L LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 181 IEIAHALCLTERQIKIWFQNRRMKWKKENKLINCSQTS 218
>gi|340727727|ref|XP_003402189.1| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Bombus
terrestris]
Length = 395
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 8/102 (7%)
Query: 177 VSSQQDHEGEDGAT---LYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 286
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 287 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 328
>gi|281182594|ref|NP_001162369.1| homeobox protein Hox-A7 [Papio anubis]
gi|160904220|gb|ABX52204.1| homeobox A7 (predicted) [Papio anubis]
gi|355747754|gb|EHH52251.1| hypothetical protein EGM_12667 [Macaca fascicularis]
Length = 230
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G E +YPWM+S +G KR RQTY+RYQ
Sbjct: 91 GLCSDLAKGACDKADEGVLHGPAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQ 141
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 142 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 188
>gi|172355404|ref|NP_001116487.1| homeobox B4 [Xenopus (Silurana) tropicalis]
gi|171846845|gb|AAI61550.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 158 GLRADSNGVGSPDVQDSCS-VSSQQDHEGEDG--ATLYPWMKSNHDA-SYSCKTGGGNKR 213
G +A +P SCS ++S H G +YPWMK H + + S + G KR
Sbjct: 86 GEKAHLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWMKKAHISRASSTYSDGEAKR 145
Query: 214 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRP 273
SR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+ P
Sbjct: 146 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLP 205
Query: 274 N 274
N
Sbjct: 206 N 206
>gi|383849605|ref|XP_003700435.1| PREDICTED: homeotic protein antennapedia-like [Megachile rotundata]
Length = 352
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 260 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 309
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 310 TERQIKIWFQNRRMKWKKE 328
>gi|148226630|ref|NP_001090379.1| homeobox B6 [Xenopus laevis]
gi|116063408|gb|AAI23271.1| Hoxb6 protein [Xenopus laevis]
Length = 223
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
Query: 177 VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYL 236
V +QD E + +YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL
Sbjct: 113 VYEEQD-EAKCATPVYPWMQRMNSCN-SSMFGPSGRRGRQTYTRYQTLELEKEFHFNRYL 170
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE--VLRPNISSTTMLDEK 284
+R+RRIEIAH L LTERQIKIWFQNRRMK KKE +L ++ S +EK
Sbjct: 171 TRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKESKLLNSSVQSAGEDEEK 220
>gi|395826618|ref|XP_003786514.1| PREDICTED: homeobox protein Hox-B6 [Otolemur garnettii]
Length = 224
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|109944940|dbj|BAE96998.1| Ultrabithorax [Artemia franciscana]
gi|109944943|dbj|BAE97000.1| Ultrabithorax [Artemia franciscana]
Length = 280
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 155 NPVGLRAD----SNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGG 210
+P L A+ SNG V QQ + A YPWM G
Sbjct: 130 SPCSLSANNSNASNGSRPQTVPQGQGTPEQQHSPSQQPAAFYPWMAI-------AGANGL 182
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 183 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEI 242
>gi|59808843|gb|AAH90114.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 233
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 158 GLRADSNGVGSPDVQDSCS-VSSQQDHEGEDG--ATLYPWMKSNHDA-SYSCKTGGGNKR 213
G +A +P SCS ++S H G +YPWMK H + + S + G KR
Sbjct: 85 GEKAHLESSITPTSPPSCSLIASDHKHPDSPGQDPVVYPWMKKAHISRASSTYSDGEAKR 144
Query: 214 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRP 273
SR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+ P
Sbjct: 145 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLP 204
Query: 274 N 274
N
Sbjct: 205 N 205
>gi|18307794|gb|AAL67686.1|AF435787_1 ultrabithorax [Artemia franciscana]
Length = 279
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 155 NPVGLRAD----SNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGG 210
+P L A+ SNG V QQ + A YPWM G
Sbjct: 129 SPCSLSANNSNASNGSRPQTVPQGQGTPEQQHSPSQQPAAFYPWMAI-------AGANGL 181
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 182 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEI 241
>gi|444517711|gb|ELV11729.1| Homeobox protein Hox-B6 [Tupaia chinensis]
Length = 224
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|400180337|gb|AFP73304.1| Hoxa7beta [Polyodon spathula]
Length = 210
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 83/129 (64%), Gaps = 16/129 (12%)
Query: 146 PGFNM-----DRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHD 200
PG+N+ +R+ N + NG P+ + + + EG +YPWM++
Sbjct: 69 PGYNLGLEAYNRHCNSLDQNILYNGPSKPNCERTDPANLNPRSEGH--FQMYPWMRT--- 123
Query: 201 ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQ 260
+GG KR RQTY+RYQTLELEKEFH+++YL+R+RR+E+AH L LTERQIKIWFQ
Sbjct: 124 ------SGGDRKRGRQTYTRYQTLELEKEFHFSRYLTRRRRVEVAHALCLTERQIKIWFQ 177
Query: 261 NRRMKLKKE 269
NRRMK KKE
Sbjct: 178 NRRMKWKKE 186
>gi|2352536|gb|AAB69194.1| LOX20 homeodomain protein [Helobdella triserialis]
Length = 321
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWMK H + + G NKR+R +Y+R+QTLELEKEFH+N+YLSR+RRIEIAH L L+
Sbjct: 1 YPWMKRMHLICENGEQGVDNKRTRTSYTRHQTLELEKEFHFNRYLSRRRRIEIAHVLNLS 60
Query: 252 ERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 61 ERQIKIWFQNRRMKWKKD 78
>gi|431890743|gb|ELK01622.1| Homeobox protein Hox-B6 [Pteropus alecto]
Length = 224
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|30314938|gb|AAP30719.1| Hox5 [Diplosoma listerianum]
Length = 164
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 12/105 (11%)
Query: 173 DSCSVSSQQDHEGEDG------ATLYPWMKSNHDASYSCKTG--GGNKRSRQTYSRYQTL 224
D ++SS Q GE+ +YPWMK H+ C+ NKR R +YSRYQTL
Sbjct: 52 DLTALSSSQQQTGEEKEDTEPLTVIYPWMKRIHN----CQGDPLDANKRRRTSYSRYQTL 107
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRM+ KKE
Sbjct: 108 ELEKEFHYNRYLTRRRRVEIAHILSLSERQIKIWFQNRRMRWKKE 152
>gi|449477637|ref|XP_002188517.2| PREDICTED: homeobox protein Hox-C6-like, partial [Taeniopygia
guttata]
Length = 212
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 4/96 (4%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
E + G +YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRI
Sbjct: 116 QEQKSGIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRI 174
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
EIA+ L LTERQIKIWFQNRRMK KKE N+SST
Sbjct: 175 EIANALCLTERQIKIWFQNRRMKWKKET---NLSST 207
>gi|440910523|gb|ELR60317.1| Homeobox protein Hox-B6 [Bos grunniens mutus]
Length = 224
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|354474764|ref|XP_003499600.1| PREDICTED: homeobox protein Hox-B6-like [Cricetulus griseus]
gi|344249141|gb|EGW05245.1| Homeobox protein Hox-B6 [Cricetulus griseus]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|296202581|ref|XP_002748516.1| PREDICTED: homeobox protein Hox-B6 [Callithrix jacchus]
gi|403279477|ref|XP_003931276.1| PREDICTED: homeobox protein Hox-B6 [Saimiri boliviensis
boliviensis]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|338710910|ref|XP_003362443.1| PREDICTED: homeobox protein Hox-B6-like [Equus caballus]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|426238970|ref|XP_004013409.1| PREDICTED: homeobox protein Hox-B6 [Ovis aries]
Length = 247
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 150 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 208
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 209 TERQIKIWFQNRRMKWKKE 227
>gi|21886813|ref|NP_032295.1| homeobox protein Hox-B6 [Mus musculus]
gi|62656892|ref|XP_573182.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|392331895|ref|XP_003752419.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|123253|sp|P09023.2|HXB6_MOUSE RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein MH-22A
gi|387203|gb|AAA37843.1| Hox2.2 protein, partial [Mus musculus]
gi|817962|emb|CAA39834.1| homeobox protein [Mus musculus]
gi|16877265|gb|AAH16893.1| Homeo box B6 [Mus musculus]
gi|148684079|gb|EDL16026.1| homeobox B6 [Mus musculus]
gi|149053983|gb|EDM05800.1| similar to homeotic protein Hox 2.2 - mouse (predicted) [Rattus
norvegicus]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|335297812|ref|XP_003358123.1| PREDICTED: homeobox protein Hox-B6-like [Sus scrofa]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|340727738|ref|XP_003402194.1| PREDICTED: homeotic protein antennapedia [Bombus terrestris]
gi|325305997|gb|ADZ11103.1| antennapedia-like protein [Bombus terrestris]
Length = 352
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|291405869|ref|XP_002719359.1| PREDICTED: homeobox B6 [Oryctolagus cuniculus]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|14916595|sp|Q9IA23.1|HXA5_HETFR RecName: Full=Homeobox protein Hox-A5
gi|7271832|gb|AAF44643.1|AF224262_5 HoxA5 [Heterodontus francisci]
Length = 275
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQ 216
+GVG SP +D SS G+ A +YPWM+ H S+ G KR+R
Sbjct: 147 DGVGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLH-ISHDSMGGPEGKRART 205
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 258
>gi|410934531|gb|AFV93982.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 199
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 9/80 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM++ G +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 111 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALGL 161
Query: 251 TERQIKIWFQNRRMKLKKEV 270
TERQIKIWFQNRRMKLKKE
Sbjct: 162 TERQIKIWFQNRRMKLKKEA 181
>gi|383849764|ref|XP_003700507.1| PREDICTED: uncharacterized protein LOC100875892 [Megachile
rotundata]
Length = 375
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWMKS++ + G G KR+RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA L LT
Sbjct: 200 YPWMKSSY--ANGDTNGAGQKRTRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAQALCLT 257
Query: 252 ERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 258 ERQIKIWFQNRRMKAKKD 275
>gi|348522363|ref|XP_003448694.1| PREDICTED: homeobox protein Hox-B6b-like [Oreochromis niloticus]
gi|154183845|gb|ABS70784.1| Hoxb6b [Haplochromis burtoni]
Length = 235
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 88/154 (57%), Gaps = 29/154 (18%)
Query: 161 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 192
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 80 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQAVSMSSSIDDKSSTLIY 139
Query: 193 PWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
PWM+ +A + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 140 PWMQ-RMNACSAGPFGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 198
Query: 253 RQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
RQIKIWFQNRRMK KKE N S T +E+ E
Sbjct: 199 RQIKIWFQNRRMKWKKENKLLNPSKTPEEEEQAE 232
>gi|350405515|ref|XP_003487458.1| PREDICTED: homeotic protein antennapedia-like [Bombus impatiens]
Length = 351
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 307
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 308 CLTERQIKIWFQNRRMKWKKE 328
>gi|328706300|ref|XP_003243055.1| PREDICTED: homeotic protein antennapedia-like isoform 2
[Acyrthosiphon pisum]
Length = 393
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P +Q + + Q + + LYPWM+S KR RQTY+RYQTLELE
Sbjct: 275 TPPLQTPTAQNQQAVNNNSLPSPLYPWMRSQFGPD------SERKRGRQTYTRYQTLELE 328
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 329 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 370
>gi|355753957|gb|EHH57922.1| hypothetical protein EGM_07667 [Macaca fascicularis]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|187608357|ref|NP_001119917.1| homeobox protein Hox-D4a [Danio rerio]
gi|190337184|gb|AAI62966.1| Homeo box D4a [Danio rerio]
gi|190338908|gb|AAI62983.1| Homeo box D4a [Danio rerio]
gi|190339776|gb|AAI63059.1| Hoxd4a protein [Danio rerio]
Length = 256
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G D+ P A + + + S + QQ+ + ++G A +YPWMK
Sbjct: 92 QPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKK 151
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 152 VHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 211
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 212 IWFQNRRMKWKKDHKLPN 229
>gi|301128875|emb|CBL59339.1| HoxA5 [Scyliorhinus canicula]
Length = 274
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQ 216
+G+G SP +D SS G+ A +YPWM+ H S+ G KR+R
Sbjct: 146 DGIGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLH-ISHDSMGGPEGKRART 204
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 205 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 257
>gi|345805496|ref|XP_003435306.1| PREDICTED: homeobox protein Hox-B6 [Canis lupus familiaris]
gi|281344382|gb|EFB19966.1| hypothetical protein PANDA_005013 [Ailuropoda melanoleuca]
Length = 224
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|322799475|gb|EFZ20783.1| hypothetical protein SINV_00833 [Solenopsis invicta]
Length = 522
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
T+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 282 TIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 341
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 342 TLVLSERQIKIWFQNRRMKWKKDHKLPN 369
>gi|357626567|gb|EHJ76618.1| antennapedia-like proteinue protein [Danaus plexippus]
Length = 303
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 210 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 259
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 260 CLTERQIKIWFQNRRMKWKKE 280
>gi|277349090|ref|NP_001162171.1| ultrabithorax [Apis mellifera]
gi|269979254|gb|ACZ56139.1| ultrabithorax [Apis mellifera]
Length = 330
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 14/105 (13%)
Query: 173 DSCSVSSQ-------QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPSNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEI 290
>gi|170070071|ref|XP_001869455.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167865904|gb|EDS29287.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 361
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 271 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 320
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 321 TERQIKIWFQNRRMKWKKE 339
>gi|301128902|emb|CBL59364.1| HoxD4 [Scyliorhinus canicula]
Length = 240
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 154 GNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNK 212
G PV S +G P Q + +Q + A +YPWMK H + + TGG K
Sbjct: 91 GEPVAPLQVS--IGRPCSQQQHNPKNQNGTATKQPAVVYPWMKKVHVNTVNPNYTGGEPK 148
Query: 213 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLR 272
RSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 149 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKL 208
Query: 273 PNISS 277
PN +
Sbjct: 209 PNTKT 213
>gi|15450324|gb|AAK96031.1| homeodomain transcription factor Prothoraxless [Tribolium
castaneum]
gi|270002803|gb|EEZ99250.1| antennapedia [Tribolium castaneum]
Length = 323
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 232 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 281
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 282 TERQIKIWFQNRRMKWKKE 300
>gi|387598536|gb|AFJ91924.1| homeodomain transcription factor 4 [Platynereis dumerilii]
Length = 273
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYN 233
S SQ + + +YPWMK H S G NKR+R Y+R+Q LELEKEFH+N
Sbjct: 128 SQCSQPNSTPTNPPVIYPWMKRIHVGSQGANGAYGADNKRTRTAYTRHQVLELEKEFHFN 187
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+YL+R+RRIEIAH L LT+RQIKIWFQNRRMK KKE PN
Sbjct: 188 RYLTRRRRIEIAHALCLTKRQIKIWFQNRRMKWKKENKLPN 228
>gi|157124729|ref|XP_001660496.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873900|gb|EAT38125.1| AAEL009947-PA [Aedes aegypti]
Length = 325
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 233 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 282
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 283 CLTERQIKIWFQNRRMKWKKE 303
>gi|170029597|ref|XP_001842678.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863997|gb|EDS27380.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 331
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 239 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 288
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 289 CLTERQIKIWFQNRRMKWKKE 309
>gi|6706217|emb|CAB65909.1| homeobox protein [Homo sapiens]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|1098678|gb|AAB03236.1| homeotic protein [Schistocerca americana]
Length = 331
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 237 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 286
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 287 TERQIKIWFQNRRMKWKKE 305
>gi|321475842|gb|EFX86804.1| putative homeotic Antennapedia protein [Daphnia pulex]
Length = 657
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 565 LYPWMRSQFAE---------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCL 615
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 616 TERQIKIWFQNRRMKWKKE 634
>gi|34484444|gb|AAQ72844.1| HoxB6b [Sphoeroides nephelus]
Length = 233
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 97/188 (51%), Gaps = 34/188 (18%)
Query: 111 NHTDYLRTNSDKETLNATNFVPKDEAISE-MVDGKPPGFNMDRNGNPVGLRADSNGVGS- 168
+TD LR S+ T A N K S G + G P + N VG+
Sbjct: 31 GYTDPLRHYSNAATYGAANMQEKVYPASYYQQTGAAAIYGRAGGGAPC----EYNPVGTF 86
Query: 169 -PDVQDSCSVSSQQDH--------------------------EGEDGATLYPWMKSNHDA 201
D + SC+ SS++D + + +YPWM+ +A
Sbjct: 87 YKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQSVSMGSSIDDKSSTLIYPWMQ-RMNA 145
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTERQIKIWFQN
Sbjct: 146 CSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQN 205
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 206 RRMKWKKE 213
>gi|355568482|gb|EHH24763.1| hypothetical protein EGK_08478 [Macaca mulatta]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|23503237|ref|NP_061825.2| homeobox protein Hox-B6 [Homo sapiens]
gi|114666344|ref|XP_001172963.1| PREDICTED: homeobox protein Hox-B6 isoform 1 [Pan troglodytes]
gi|397514558|ref|XP_003827548.1| PREDICTED: homeobox protein Hox-B6 [Pan paniscus]
gi|116242515|sp|P17509.4|HXB6_HUMAN RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein Hox-2B;
AltName: Full=Homeobox protein Hu-2
gi|11138932|gb|AAG31552.1|AF287967_2 homeobox B6 [Homo sapiens]
gi|15779175|gb|AAH14651.1| Homeobox B6 [Homo sapiens]
gi|61363527|gb|AAX42406.1| homeobox B6 [synthetic construct]
gi|119615134|gb|EAW94728.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615135|gb|EAW94729.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615136|gb|EAW94730.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615137|gb|EAW94731.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|123979658|gb|ABM81658.1| homeobox B6 [synthetic construct]
gi|158257832|dbj|BAF84889.1| unnamed protein product [Homo sapiens]
gi|208968501|dbj|BAG74089.1| homeobox B6 [synthetic construct]
gi|312150318|gb|ADQ31671.1| homeobox B6 [synthetic construct]
gi|410208932|gb|JAA01685.1| homeobox B6 [Pan troglodytes]
gi|410250610|gb|JAA13272.1| homeobox B6 [Pan troglodytes]
gi|410287208|gb|JAA22204.1| homeobox B6 [Pan troglodytes]
gi|410331361|gb|JAA34627.1| homeobox B6 [Pan troglodytes]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|297715935|ref|XP_002834297.1| PREDICTED: homeobox protein Hox-B6 [Pongo abelii]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|426347606|ref|XP_004041440.1| PREDICTED: homeobox protein Hox-B6 [Gorilla gorilla gorilla]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|402899485|ref|XP_003912726.1| PREDICTED: homeobox protein Hox-B6 [Papio anubis]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 708 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 766
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 767 TERQIKIWFQNRRMKWKKE 785
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 381 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 431
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 432 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 467
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 182 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 239
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 535 LYPWMRSQFAE---------RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCL 585
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 586 TERQIKIWFQNRRMKWKKE 604
>gi|348562279|ref|XP_003466938.1| PREDICTED: homeobox protein Hox-B5-like isoform 2 [Cavia porcellus]
Length = 271
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 163 SNGVGSPDV---QDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
S+ +GSP + Q +S EG+ ++PWM+ H S+ TG KR+R Y+
Sbjct: 147 SSQLGSPSLARAQPEPMATSTAAPEGQ-APQIFPWMRKLH-ISHDNMTGPDGKRARTAYT 204
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 254
>gi|123297|sp|P09019.1|HXB5_XENLA RecName: Full=Homeobox protein Hox-B5; AltName: Full=Xhox-1B;
AltName: Full=XlHbox-4
gi|1334652|emb|CAA30125.1| unnamed protein product [Xenopus laevis]
Length = 230
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 75/104 (72%), Gaps = 14/104 (13%)
Query: 171 VQDSCSVSSQQDHEGEDGAT--LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLE 225
+QD+CS + G DG + ++PWM+ NHD + G KR+R Y+RYQTLE
Sbjct: 119 LQDNCSPGA----AGTDGQSPQIFPWMRKLHINHDMA-----GPDGKRARTAYTRYQTLE 169
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 170 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 213
>gi|306878|gb|AAA36003.1| homeobox c1 protein [Homo sapiens]
Length = 217
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YP M+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPSMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Query: 191 LYPWMKSNHDASYSCKTG--GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + G G +KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 126 IYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTL 185
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
L+ERQIKIWFQNRRMK KKE PN + T L + + A
Sbjct: 186 CLSERQIKIWFQNRRMKWKKEHKLPN--TKTRLTDSVTA 222
>gi|45384234|ref|NP_990624.1| homeobox protein Hox-B4 [Gallus gallus]
gi|123264|sp|P14840.1|HXB4_CHICK RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-Z; Short=Chox-Z
gi|63505|emb|CAA35614.1| unnamed protein product [Gallus gallus]
Length = 245
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGA---TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQ 222
G+P SCS +S +YPWMK H ++ + +GG KRSR Y+R Q
Sbjct: 102 GTPSPPPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQ 161
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 162 VLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|332024158|gb|EGI64374.1| Homeotic protein deformed [Acromyrmex echinatior]
Length = 522
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
T+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 281 TIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 340
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 341 TLVLSERQIKIWFQNRRMKWKKDHKLPN 368
>gi|2661827|emb|CAA74883.1| Hoxd4 protein [Danio rerio]
Length = 256
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 137 ISEMVDG---KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG----- 188
I V G +P G D+ P A + + + S + QQ+ + ++G
Sbjct: 82 ICSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTCGQQQNTKTQNGIPTKQ 141
Query: 189 -ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
A +YPWMK H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIE AH
Sbjct: 142 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAH 201
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 202 TLSLSERQIKIWFQNRRMKWKKDHKLPN 229
>gi|383209610|emb|CCE45703.1| antennapedia [Parasteatoda tepidariorum]
Length = 327
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 226 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 275
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 276 CLTERQIKIWFQNRRMKWKKE 296
>gi|332692470|gb|AEE90152.1| Homeobox A7a [Anguilla anguilla]
Length = 236
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 65/82 (79%), Gaps = 7/82 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGG---NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
LYPWM+S S +T G KR RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 114 LYPWMRS----SGMLRTARGYPERKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHA 169
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L LTERQIKIWFQNRRMK KK+
Sbjct: 170 LCLTERQIKIWFQNRRMKWKKD 191
>gi|410980869|ref|XP_003996796.1| PREDICTED: homeobox protein Hox-B6 [Felis catus]
Length = 224
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|327275883|ref|XP_003222701.1| PREDICTED: homeobox protein Hox-B4-like [Anolis carolinensis]
Length = 251
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 168 SPDVQDSCSVSS-QQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLE 225
+P SCS +S Q +YPWMK H +S + +GG KRSR Y+R Q LE
Sbjct: 104 TPSPPPSCSQNSLNQSPSACKEPVVYPWMKKVHVSSVNPNYSGGEPKRSRTAYTRQQVLE 163
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 164 LEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 212
>gi|332024150|gb|EGI64366.1| Homeotic protein antennapedia [Acromyrmex echinatior]
Length = 352
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 260 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 309
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 310 TERQIKIWFQNRRMKWKKE 328
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKDHKLPN 218
>gi|334322795|ref|XP_003340303.1| PREDICTED: homeobox protein Hox-B6-like [Monodelphis domestica]
Length = 223
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 126 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 184
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 185 TERQIKIWFQNRRMKWKKE 203
>gi|60654293|gb|AAX29839.1| homeobox B6 [synthetic construct]
Length = 225
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|86515364|ref|NP_001034505.1| prothoraxless [Tribolium castaneum]
gi|7767519|gb|AAF69136.1|AF228509_1 prothoraxless [Tribolium castaneum]
Length = 325
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 10/79 (12%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 234 LYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 284 TERQIKIWFQNRRMKWKKE 302
>gi|359754099|gb|AEV59521.1| HOXB6 [Macropus eugenii]
Length = 223
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 126 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 184
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 185 TERQIKIWFQNRRMKWKKE 203
>gi|351713532|gb|EHB16451.1| Homeobox protein Hox-B6 [Heterocephalus glaber]
Length = 224
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Query: 182 DHEGEDGAT-LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
D E + +T +YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+R
Sbjct: 117 DTEEQKCSTPVYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRR 175
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 176 RIEIAHALCLTERQIKIWFQNRRMKWKKE 204
>gi|5441267|dbj|BAA82361.1| Hoxd-4 [Paralichthys olivaceus]
Length = 235
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +R+G+ A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 QPRGHVQERSGHASPFDAQTEQGAPVPVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 131
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 192 IWFQNRRMKWKKDHKLPN 209
>gi|385654491|gb|AFI61990.1| Hox-B6b [Anguilla japonica]
Length = 227
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
E + A +YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 124 EMKSSAPVYPWMQRMN----SCNGTFGNTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 179
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 180 IEIAHALCLTERQIKIWFQNRRMKWKKE 207
>gi|301617259|ref|XP_002938066.1| PREDICTED: homeobox protein Hox-B6 [Xenopus (Silurana) tropicalis]
Length = 223
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Query: 180 QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
++ E + +YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL+R+
Sbjct: 115 EEQDEAKCATPVYPWMQRMNSCNSSV-FGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRR 173
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE--VLRPNISSTTMLDEK 284
RRIEIAH L LTERQIKIWFQNRRMK KKE +L ++ S +EK
Sbjct: 174 RRIEIAHSLCLTERQIKIWFQNRRMKWKKESKLLNSSVQSAGEDEEK 220
>gi|220898193|gb|ACL81448.1| HoxB5 [Latimeria menadoensis]
Length = 264
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 86/147 (58%), Gaps = 29/147 (19%)
Query: 128 TNFVPKDE--AISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG 185
TNF DE A SE +G P RN N P Q + +S EG
Sbjct: 125 TNFTELDETSASSETEEGAP------RNSNI------------PRAQTEPTATSTTATEG 166
Query: 186 EDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
+ ++PWM+ +HD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 167 QT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 220
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 221 EIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|395532700|ref|XP_003768406.1| PREDICTED: homeobox protein Hox-B6 [Sarcophilus harrisii]
Length = 223
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 126 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 184
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 185 TERQIKIWFQNRRMKWKKE 203
>gi|312125851|gb|ADQ27869.1| fushi tarazu [Forficula auricularia]
Length = 191
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 71/99 (71%), Gaps = 9/99 (9%)
Query: 206 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 265
KT G+KRSRQTYSRYQTLELEKEFH+NKYL+R+RRIEIA+ L LTERQIKIWFQNRRMK
Sbjct: 24 KTTSGSKRSRQTYSRYQTLELEKEFHFNKYLTRRRRIEIANALHLTERQIKIWFQNRRMK 83
Query: 266 LKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAALPKANY 304
KK + +T D L A SA LPKAN
Sbjct: 84 EKK-------TRSTEADMNLSAATAL--TESAFLPKANL 113
>gi|32370|emb|CAA41335.1| HOX 2.2 [Homo sapiens]
Length = 224
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|432925212|ref|XP_004080699.1| PREDICTED: homeobox protein Hox-B6b-like [Oryzias latipes]
Length = 235
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 88/154 (57%), Gaps = 29/154 (18%)
Query: 161 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 192
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 80 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQTVSMSSSIDDKSSTLIY 139
Query: 193 PWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
PWM+ +A + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 140 PWMQ-RMNACSAGPFGTSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 198
Query: 253 RQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
RQIKIWFQNRRMK KKE N S T +E+ E
Sbjct: 199 RQIKIWFQNRRMKWKKENKLLNPSKTPEEEEQAE 232
>gi|74267579|dbj|BAE44288.1| hoxD4a [Oryzias latipes]
gi|83016979|dbj|BAE53500.1| hoxD4a [Oryzias latipes]
Length = 236
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 97/169 (57%), Gaps = 19/169 (11%)
Query: 115 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQD- 173
Y R+N ++ + T VP D A+ +P DR +P A ++ P VQ
Sbjct: 51 YPRSNYTEQPFSCTT-VP-DPAV------QPRAHVHDRANHPSHFAAQTDQ--GPPVQAA 100
Query: 174 ---SC----SVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLE 225
+C S +Q + + A +YPWMK H + + TG KRSR Y+R Q LE
Sbjct: 101 GPRTCGQQQSTKTQNGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLE 160
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 161 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 209
>gi|327263834|ref|XP_003216722.1| PREDICTED: homeobox protein Hox-C4-like [Anolis carolinensis]
Length = 283
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 182 DHEGEDGA---TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
DH + +YPWMK H ++ + TGG KRSR Y+R Q LELEKEFHYN+YL+
Sbjct: 144 DHPSSTASKQPIVYPWMKKIHVSTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLT 203
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 204 RRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 240
>gi|112983708|ref|NP_001037319.1| antennapedia homologue protein [Bombyx mori]
gi|391615|dbj|BAA04087.1| Antennapedia homologue protein [Bombyx mori]
gi|426204115|gb|AFY12623.1| antennapedia-like protein [Bombyx mori]
Length = 259
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 166 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 215
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 216 CLTERQIKIWFQNRRMKWKKE 236
>gi|28629649|gb|AAO43030.1| HoxB5 [Latimeria menadoensis]
Length = 225
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 86/147 (58%), Gaps = 29/147 (19%)
Query: 128 TNFVPKDE--AISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEG 185
TNF DE A SE +G P RN N P Q + +S EG
Sbjct: 86 TNFTELDETSASSETEEGAP------RNSN------------IPRAQTEPTATSTTATEG 127
Query: 186 EDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
+ ++PWM+ +HD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 128 QT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 181
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
EIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 182 EIAHALCLSERQIKIWFQNRRMKWKKD 208
>gi|345489557|ref|XP_003426162.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Nasonia vitripennis]
Length = 413
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 178 SSQQDHEGEDGAT---LYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
S QQ G+ G YPWM S D G +R RQTY+R+QTLELEKE
Sbjct: 238 SCQQPTAGQPGIPEIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKE 297
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
FH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 298 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 338
>gi|332259419|ref|XP_003278787.1| PREDICTED: homeobox protein Hox-B6-like [Nomascus leucogenys]
Length = 224
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>gi|306965454|emb|CBK55568.1| antennapedia [Glomeris marginata]
Length = 201
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 13/90 (14%)
Query: 180 QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
Q G G+ LYPWM+ KR RQTY+RYQTLELEKEFH+N+YL+R+
Sbjct: 106 QSPGAGSLGSPLYPWMRKR-------------KRGRQTYTRYQTLELEKEFHFNRYLTRR 152
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 RRIEIAHALCLTERQIKIWFQNRRMKWKKE 182
>gi|219870099|gb|ACL50280.1| homeobox protein Hoxb-4 [Xenopus laevis]
Length = 230
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
Query: 174 SCSV-SSQQDH--EGEDGATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
SCS+ SS+ H E +YPWMK H + S + G KRSR Y+R Q LELEKE
Sbjct: 98 SCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKE 157
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
FHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 158 FHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 202
>gi|88604720|gb|ABD46731.1| homeobox protein antennapedia [Endeis spinosa]
Length = 203
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 17/114 (14%)
Query: 163 SNGVGSPDVQDSCSVSSQQ-------DHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSR 215
S G+G +V S S Q + G + LYPWM+S + KR R
Sbjct: 84 SGGLGGANVPPSPVHSPQMYNHHQSITNSGVLPSPLYPWMRSQFE----------RKRGR 133
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 134 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>gi|88604716|gb|ABD46729.1| homeobox protein sex comb reduced [Nymphon gracile]
Length = 274
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 169 IYPWMRKVHIGQNGMSNGMETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 229 SERQIKIWFQNRRMKWKKE 247
>gi|332692498|gb|AEE90177.1| Homeobox B6b [Anguilla anguilla]
Length = 227
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
E + A +YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 124 EMKSSAPVYPWMQRMN----SCNGTFGNTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 179
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 180 IEIAHALCLTERQIKIWFQNRRMKWKKE 207
>gi|28629629|gb|AAO43020.1| HoxA7 [Latimeria menadoensis]
Length = 140
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 9/94 (9%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E+ +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 41 QDENNFRIYPWMRS---------SGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 91
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
IAH L LTERQIKIWFQNRRMK KKE N +S
Sbjct: 92 IAHALCLTERQIKIWFQNRRMKWKKEHKEDNFTS 125
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 191 LYPWMKSNHDASYSCKTG--GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + G G +KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 52 IYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTL 111
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KKE PN
Sbjct: 112 CLSERQIKIWFQNRRMKWKKEHKLPN 137
>gi|148225917|ref|NP_001089733.1| homeobox protein Hox-B4 [Xenopus laevis]
gi|123238|sp|P09070.1|HXB4_XENLA RecName: Full=Homeobox protein Hox-B4; AltName: Full=Xhox-1A
gi|214265|gb|AAA49756.1| homeobox protein 1A [Xenopus laevis]
gi|76780348|gb|AAI06430.1| MGC131119 protein [Xenopus laevis]
Length = 232
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
Query: 174 SCSV-SSQQDH--EGEDGATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
SCS+ SS+ H E +YPWMK H + S + G KRSR Y+R Q LELEKE
Sbjct: 100 SCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKE 159
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
FHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 160 FHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 204
>gi|340727743|ref|XP_003402196.1| PREDICTED: hypothetical protein LOC100642982 [Bombus terrestris]
Length = 543
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 301 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 360
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE-APPVFMPAYSAA 298
L L+ERQIKIWFQNRRMK KK+ PN + + + APP PA + A
Sbjct: 361 TLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKNANGQTAPPSAKPAKTPA 413
>gi|209867654|gb|ACI90343.1| Hox-5b [Philodina roseola]
Length = 284
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 14/93 (15%)
Query: 191 LYPWMKSNHDAS-------------YSCKTGGG-NKRSRQTYSRYQTLELEKEFHYNKYL 236
+YPWM+ H S Y +T G NKR+R +YSRYQTLELEKEFH+N+YL
Sbjct: 148 IYPWMRRIHSHSTTDVFNDHRFFFFYHLETHVGENKRTRTSYSRYQTLELEKEFHFNRYL 207
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
SR+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 208 SRRRRIEIAHSLALTERQIKIWFQNRRMKWKKD 240
>gi|350405522|ref|XP_003487461.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus impatiens]
Length = 317
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 14/105 (13%)
Query: 173 DSCSVSSQ-------QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPTNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEI 290
>gi|350405520|ref|XP_003487460.1| PREDICTED: hypothetical protein LOC100747283 [Bombus impatiens]
Length = 543
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 301 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 360
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE-APPVFMPAYSAA 298
L L+ERQIKIWFQNRRMK KK+ PN + + + APP PA + A
Sbjct: 361 TLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKNANGQTAPPSAKPAKTPA 413
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 180 QQDHEGEDGATLYPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 125 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 184
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS T + L+ P
Sbjct: 185 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSNTASTQHLQTLP 229
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Query: 190 TLYPWMKSNH--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWMK H + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 164 VMYPWMKRAHIHPGVGAAQNGAEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHA 223
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
L LTERQ+KIWFQNRRMK KK+ PN +
Sbjct: 224 LGLTERQVKIWFQNRRMKWKKDHNLPNTKT 253
>gi|109944950|dbj|BAE97005.1| Antennapedia [Procambarus clarkii]
Length = 333
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 28/124 (22%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDG----------------ATLYPWMKSNHDASYSC 205
D NG G P QD+ + QDH+G + LYPWM+S
Sbjct: 200 DPNG-GPP--QDTSLHMAAQDHQGWGAQQQPQQQQQNASSALPSPLYPWMRSQF------ 250
Query: 206 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 265
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQ+RRMK
Sbjct: 251 ---AERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQDRRMK 307
Query: 266 LKKE 269
KKE
Sbjct: 308 WKKE 311
>gi|328778463|ref|XP_394120.4| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Apis
mellifera]
Length = 396
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Query: 192 YPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
YPWM S D G +R RQTY+R+QTLELEKEFHYN YL+R+RRIEIAH
Sbjct: 245 YPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAH 304
Query: 247 ELQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 305 ALCLTERQIKIWFQNRRMKLKKEL 328
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 180 QQDHEGEDGATLYPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|45553381|ref|NP_996219.1| ultrabithorax, isoform F [Drosophila melanogaster]
gi|45446510|gb|AAS65158.1| ultrabithorax, isoform F [Drosophila melanogaster]
Length = 355
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 81/129 (62%), Gaps = 12/129 (9%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM +
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWMAIAGECPE 251
Query: 204 --SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+ T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQN
Sbjct: 252 DPTKSTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 311
Query: 262 RRMKLKKEV 270
RRMKLKKE+
Sbjct: 312 RRMKLKKEI 320
>gi|328709798|ref|XP_001946891.2| PREDICTED: hypothetical protein LOC100161376 [Acyrthosiphon pisum]
Length = 531
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 72/112 (64%), Gaps = 15/112 (13%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGG----GNKRSRQTYSRYQ 222
GSP + D D E D +YPWMK NH A GG KR R Y+RYQ
Sbjct: 260 GSPIMMD--------DSESSD-RVIYPWMKKNHVAGM--PNGGYQPVDVKRQRTAYTRYQ 308
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFH+NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 309 VLELEKEFHFNKYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKYKKDNHLPN 360
>gi|255742435|gb|ACU32550.1| homeobox protein HoxA5 [Callorhinchus milii]
Length = 281
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQ 216
+GVG SP +D SS G+ A +YPWM+ H S+ G KR+R
Sbjct: 153 DGVGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLH-ISHDNMGGPEGKRART 211
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 212 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 264
>gi|380014418|ref|XP_003691229.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Apis florea]
Length = 395
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Query: 192 YPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
YPWM S D G +R RQTY+R+QTLELEKEFHYN YL+R+RRIEIAH
Sbjct: 245 YPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAH 304
Query: 247 ELQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 305 ALCLTERQIKIWFQNRRMKLKKEL 328
>gi|357626566|gb|EHJ76617.1| putative fushi-tarazu-like protein [Danaus plexippus]
Length = 433
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 66/88 (75%), Gaps = 14/88 (15%)
Query: 187 DGATLYPWMKSNHDASYSCKTGG-----GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
D YPWMKS GG G+KR+RQTY+R+QTLELEKEFH+NKYLSR+RR
Sbjct: 282 DVQGFYPWMKS---------IGGDDKKEGSKRTRQTYTRFQTLELEKEFHFNKYLSRRRR 332
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IE++H L LTERQIKIWFQNRRMK KK+
Sbjct: 333 IEVSHALGLTERQIKIWFQNRRMKAKKD 360
>gi|3581956|emb|CAA64693.1| DthoxE [Girardia tigrina]
Length = 329
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM + + ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 209 VVYPWM----NPKMNSESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALS 264
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDE 283
LTERQIKIWFQNRRMK KK+ P ++ L++
Sbjct: 265 LTERQIKIWFQNRRMKWKKDHNIPKLNGPGTLEQ 298
>gi|391339412|ref|XP_003744044.1| PREDICTED: uncharacterized protein LOC100902699 [Metaseiulus
occidentalis]
Length = 274
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 128 IYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 187
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 188 SERQIKIWFQNRRMKWKKE 206
>gi|158702290|gb|ABW77487.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+ + LYPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+
Sbjct: 122 DKSSLLYPWMQRMNSCT-AGTLGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIS 180
Query: 246 HELQLTERQIKIWFQNRRMKLKKE--VLRPN 274
H L LTERQIKIWFQNRRMK KKE V+ P+
Sbjct: 181 HALCLTERQIKIWFQNRRMKWKKENKVMNPS 211
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLE 286
L L+ERQIKIWFQNRRMK KK+ PN SS+ + ++ L+
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSAVSNQHLQ 225
>gi|383849762|ref|XP_003700506.1| PREDICTED: homeobox protein abdominal-A homolog [Megachile
rotundata]
Length = 293
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 8/102 (7%)
Query: 177 VSSQQDHEGEDGAT---LYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
S QQ G+ G + YPWM S D G +R RQTY+R+QTLELEK
Sbjct: 125 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEK 184
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
EFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 185 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 226
>gi|332692512|gb|AEE90189.1| Homeobox C6a [Anguilla anguilla]
gi|385654505|gb|AFI62002.1| Hox-C6a [Anguilla japonica]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 8/127 (6%)
Query: 157 VGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQ 216
VG A S+ + D C SQ E + +YPWM+ + S G +R RQ
Sbjct: 92 VGQSAQSS-LAQEYTSDQCRTGSQ---EQKGSIQIYPWMQRMNSHS-GVGYGSDRRRGRQ 146
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNIS 276
YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE N++
Sbjct: 147 IYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE---SNLT 203
Query: 277 STTMLDE 283
ST +E
Sbjct: 204 STLAENE 210
>gi|88604722|gb|ABD46732.1| homeobox protein antennapedia [Nymphon gracile]
Length = 129
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 73/117 (62%), Gaps = 18/117 (15%)
Query: 161 ADSNGVGSPDVQDSCSVSSQQ--------DHEGEDGATLYPWMKSNHDASYSCKTGGGNK 212
+ GVG V S S Q + G + LYPWM+S + K
Sbjct: 7 SSGQGVGGATVPPSPVHSPQMYNHHQSITNSAGVLPSPLYPWMRSQFE----------RK 56
Query: 213 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 57 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 113
>gi|348519803|ref|XP_003447419.1| PREDICTED: homeobox protein Hox-D4a [Oreochromis niloticus]
Length = 265
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +R +P A + V + QQ+ + ++G A +YPWMK
Sbjct: 102 QPRGHVHERASHPSHFSAQTEQGTPVQVAGPRTCGQQQNTKSQNGIQAKQPAVVYPWMKK 161
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 162 VHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 221
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 222 IWFQNRRMKWKKDHKLPN 239
>gi|255742433|gb|ACU32548.1| homeobox protein HoxA7 [Callorhinchus milii]
Length = 212
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKET 194
>gi|397911072|gb|AFO68812.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 127
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 76/115 (66%), Gaps = 18/115 (15%)
Query: 159 LRADSNGVGS----PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRS 214
+R D GVG P Q + ++++ Q +YPWM+S T KR
Sbjct: 7 VRKDMAGVGGHPGHPVQQANPALNTAQM-----TTPIYPWMRS---------TAPERKRG 52
Query: 215 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 53 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 107
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 65/84 (77%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H +S + G KR+R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 124 IYPWMKKLHVSSSNDPDGMDPKRARTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLDL 183
Query: 251 TERQIKIWFQNRRMKLKKEVLRPN 274
+ERQIKIWFQNRRMK KKE PN
Sbjct: 184 SERQIKIWFQNRRMKWKKEHKLPN 207
>gi|340727736|ref|XP_003402193.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus terrestris]
Length = 330
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 14/105 (13%)
Query: 173 DSCSVSSQ-------QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
++CS++S Q H+ T YPWM G +R RQTY+RYQTLE
Sbjct: 193 NTCSLNSSASQPVATQLHQQPTNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLE 245
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
LEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 246 LEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEI 290
>gi|254029378|gb|ACT53741.1| ultrabithorax isoform I [Parhyale hawaiensis]
Length = 301
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 7/90 (7%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
Q +G++ T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 154 QMGQGQNTTTFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 206
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
RIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 207 RIEMAHALCLTERQIKIWFQNRRMKLKKEI 236
>gi|299473907|gb|ADJ18236.1| Hox7 protein [Gibbula varia]
Length = 247
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 83/125 (66%), Gaps = 17/125 (13%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDG-----ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
G PDV +++Q + +G + ++PWM+ A + KR+RQTY+RY
Sbjct: 102 GMPDV-----INTQNGYHNMNGMNPQNSAVFPWMRPGTAADVHFE----QKRTRQTYTRY 152
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTML 281
QTLELEKEFH+N+YL+R+RRIE+AH L LTERQIKIWFQNRRMK KKE N+S T
Sbjct: 153 QTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKWKKE---NNVSKLTGP 209
Query: 282 DEKLE 286
D+ L+
Sbjct: 210 DKSLQ 214
>gi|410895279|ref|XP_003961127.1| PREDICTED: homeobox protein Hox-B6b-like [Takifugu rubripes]
gi|119370788|sp|Q1KKX1.1|HXB6B_FUGRU RecName: Full=Homeobox protein Hox-B6b
gi|94482806|gb|ABF22423.1| homeobox protein HoxB6b [Takifugu rubripes]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
SVS + + +YPWM+ +A + G +R RQTY+RYQTLELEKEFH+N+Y
Sbjct: 121 SVSMGSSIDDKSSTLIYPWMQ-RMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRY 179
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
L+R+RRIEI+H L LTERQIKIWFQNRRMK KKE
Sbjct: 180 LTRRRRIEISHALCLTERQIKIWFQNRRMKWKKE 213
>gi|432933125|ref|XP_004081817.1| PREDICTED: homeobox protein Hox-D4a-like [Oryzias latipes]
Length = 256
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 97/169 (57%), Gaps = 19/169 (11%)
Query: 115 YLRTNSDKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQ-- 172
Y R+N ++ + T VP D A+ +P DR +P A ++ P VQ
Sbjct: 71 YPRSNYTEQPFSCTT-VP-DPAV------QPRAHVHDRANHPSHFAAQTDQ--GPPVQAA 120
Query: 173 --DSC----SVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLE 225
+C S +Q + + A +YPWMK H + + TG KRSR Y+R Q LE
Sbjct: 121 GPRTCGQQQSTKTQNGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLE 180
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 181 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 229
>gi|242011840|ref|XP_002426652.1| Homeobox protein Hox-A4A, putative [Pediculus humanus corporis]
gi|212510816|gb|EEB13914.1| Homeobox protein Hox-A4A, putative [Pediculus humanus corporis]
Length = 259
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Query: 178 SSQQDHEGEDGA--TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHY 232
S D EG + +YPWMK H A S + G KR R Y+R+Q LELEKEFH+
Sbjct: 31 SPDMDDEGSESGDRVIYPWMKKIHVAGVANGSFRPGMEPKRQRTAYTRHQILELEKEFHF 90
Query: 233 NKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
NKYL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 91 NKYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKFKKDNKLPN 132
>gi|121308835|dbj|BAF43724.1| transcription factor Hox5 [Metacrinus rotundus]
Length = 180
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 12/123 (9%)
Query: 158 GLRADSNGVGSPDV-QDSCSVSSQQDHEGEDGAT----------LYPWMKSNHDASYSCK 206
G + GV P V Q + V Q+ G + +YPWM+ H +S
Sbjct: 34 GGMTNCQGVTQPRVCQTATEVKGSQNSPGIQQVSPGIQSTHNEHIYPWMRRVH-SSTGLS 92
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+ KRSR Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK
Sbjct: 93 SIEPAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKW 152
Query: 267 KKE 269
KKE
Sbjct: 153 KKE 155
>gi|317419676|emb|CBN81713.1| Homeobox protein Hox-B6b [Dicentrarchus labrax]
Length = 275
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 81/137 (59%), Gaps = 29/137 (21%)
Query: 161 ADSNGVGS--PDVQDSCSVSSQQDH--------------------------EGEDGATLY 192
D N VG+ D + SC+ SS++D + + +Y
Sbjct: 82 CDYNPVGTFYKDAEGSCAFSSREDQPLFVTQEHQQRKAECPEQTVSMSSSIDDKSSTLIY 141
Query: 193 PWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
PWM+ +A + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTE
Sbjct: 142 PWMQ-RMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTE 200
Query: 253 RQIKIWFQNRRMKLKKE 269
RQIKIWFQNRRMK KKE
Sbjct: 201 RQIKIWFQNRRMKWKKE 217
>gi|109944953|dbj|BAE97007.1| Antennapedia [Procambarus clarkii]
Length = 278
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 28/124 (22%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDG----------------ATLYPWMKSNHDASYSC 205
D NG G P QD+ + QDH+G + LYPWM+S
Sbjct: 145 DPNG-GPP--QDTSLHMAAQDHQGWGAQQQPQQQQQNASSALPSPLYPWMRSQF------ 195
Query: 206 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 265
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQ+RRMK
Sbjct: 196 ---AERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQDRRMK 252
Query: 266 LKKE 269
KKE
Sbjct: 253 WKKE 256
>gi|426227776|ref|XP_004007991.1| PREDICTED: homeobox protein Hox-A6 [Ovis aries]
Length = 233
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + S G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCS-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|165873663|gb|ABY67956.1| sex combs reduced hox protein [Capitella teleta]
Length = 197
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + NKR+R +Y+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 86 IYPWMKRMHIGHDT--SNADNKRTRTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNL 143
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVF 291
TERQIKIWFQNRRMK KKE +++ + L P+
Sbjct: 144 TERQIKIWFQNRRMKWKKEHKLAHLAKSQAQKLDLHGAPIL 184
>gi|360043143|emb|CCD78555.1| hox protein Smox1 [Schistosoma mansoni]
Length = 842
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 180 QQDHEGEDGATLYPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
Q + E +YPWM D S KR+RQTY+RYQTLELEKEFH+NKYL+R
Sbjct: 550 QSGNSSESNVVVYPWMNPKGTDISVD------QKRTRQTYTRYQTLELEKEFHFNKYLTR 603
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 604 RRRIEIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|259053109|emb|CAX11341.1| antennapedia [Parasteatoda tepidariorum]
Length = 195
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 121 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 170
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 171 CLTERQIKIWFQNRRMKWKKE 191
>gi|259013356|ref|NP_001158385.1| homeobox 4 [Saccoglossus kowalevskii]
gi|32307801|gb|AAP79297.1| hox4 [Saccoglossus kowalevskii]
Length = 274
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNH---DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 160 VMYPWMKRMHVNPGIGAAAPNGAEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAH 219
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L LTERQIKIWFQNRRMK KK+ PN
Sbjct: 220 ALGLTERQIKIWFQNRRMKWKKDHNLPN 247
>gi|328778410|ref|XP_001120045.2| PREDICTED: hypothetical protein LOC724252 [Apis mellifera]
Length = 565
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 304 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 363
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 364 TLVLSERQIKIWFQNRRMKWKKDNKLPN 391
>gi|332024142|gb|EGI64358.1| Homeotic protein ultrabithorax [Acromyrmex echinatior]
Length = 331
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Query: 177 VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYL 236
V++Q + T YPWM G +R RQTY+RYQTLELEKEFH N YL
Sbjct: 205 VATQLHQQPTSNHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLELEKEFHTNHYL 257
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 258 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 291
>gi|47216997|emb|CAG01625.1| unnamed protein product [Tetraodon nigroviridis]
Length = 568
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 58 VVYPWMKKVHVNIVSSSYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 117
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFM 292
L+ERQIKIWFQNRRMK KK+ PN T ++ K +A + +
Sbjct: 118 CLSERQIKIWFQNRRMKWKKDHKLPN----TKINTKRQAAGLLL 157
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 26/29 (89%)
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
R+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 336 RVEMANLLNLSERQIKIWFQNRRMKYKKD 364
>gi|157816015|gb|ABV82026.1| homeobox protein HoxD4aa [Salmo salar]
gi|158702368|gb|ABW77555.1| homeobox protein HoxD4aa [Salmo salar]
Length = 236
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +R +P A + V + QQ+ + + G +YPWMK
Sbjct: 72 QPRGHVHERASHPSPFTAQTEPCPPVQVTGPRTCGQQQNTKNQHGIQAKQPTVVYPWMKK 131
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
+H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 192 IWFQNRRMKWKKDHKLPN 209
>gi|410911236|ref|XP_003969096.1| PREDICTED: homeobox protein Hox-A4a-like [Takifugu rubripes]
Length = 286
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCK-TGGGNKRSR 215
L A +G CS++S+ G +YPWMK H + + GG KRSR
Sbjct: 125 LSAAPDGGAGAIASKDCSIASEVYPGVAKGKEPVVYPWMKKVHATNITAGYNGGVPKRSR 184
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 185 TAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 243
>gi|254029380|gb|ACT53742.1| ultrabithorax isoform II [Parhyale hawaiensis]
Length = 293
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 7/90 (7%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
Q +G++ T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 146 QMGQGQNTTTFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 198
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
RIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 199 RIEMAHALCLTERQIKIWFQNRRMKLKKEI 228
>gi|8650523|gb|AAF78248.1|AF275310_1 Hox5 [Haliotis rufescens]
Length = 281
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGG-NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ YS G KRSR +Y+R+QTLELEKEFHYNKYL+R+RRIEIAH L
Sbjct: 178 IYPWMRR---MQYSSDGNDGETKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALN 234
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
LTERQIKIWFQNRRMK KKE +I+ L LE
Sbjct: 235 LTERQIKIWFQNRRMKWKKEHKLSHIAKNMNLANALE 271
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKDHKLPN 210
>gi|19070094|emb|CAD24794.1| HOM-C transcription factor [Oscheius tipulae]
Length = 192
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 74/120 (61%), Gaps = 15/120 (12%)
Query: 187 DGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
GA +YPWM H S + G KR R Y+R Q LELEKEFH+NKYL+RKRR+EIAH
Sbjct: 78 SGAAVYPWMTRVHSNSTGPR---GEKRQRTAYTRVQVLELEKEFHFNKYLTRKRRLEIAH 134
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAALPKANYDW 306
L LTERQ+KIWFQNRRMK KKE I++ MP + +LP AN+ +
Sbjct: 135 ALTLTERQVKIWFQNRRMKHKKENKDKPITTQ------------MMPFPAGSLPFANFGF 182
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 124 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 183
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 184 LCLSERQIKIWFQNRRMKWKKDHKLPN 210
>gi|74267563|dbj|BAE44280.1| hoxC6a [Oryzias latipes]
gi|83016965|dbj|BAE53488.1| hoxC6a [Oryzias latipes]
Length = 233
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 5/97 (5%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S+S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQRMN--SHSVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 178
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE N++ST E+ A
Sbjct: 179 TERQIKIWFQNRRMKWKKE---SNLTSTVTGSEQTGA 212
>gi|410952526|ref|XP_003982930.1| PREDICTED: homeobox protein Hox-A6 isoform 2 [Felis catus]
Length = 249
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 8/129 (6%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE N + +
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSG 224
Query: 281 LDEKLEAPP 289
D + +A P
Sbjct: 225 EDAEAKAGP 233
>gi|213510826|ref|NP_001133040.1| homeobox protein HoxA5ab [Salmo salar]
gi|157816063|gb|ABV82050.1| homeobox protein HoxA5ab [Salmo salar]
gi|158702242|gb|ABW77452.1| homeobox protein HoxA5ab [Salmo salar]
Length = 285
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
DGA +YPWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 183 DGAQPQIYPWMRKLH-ISHDSLTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 241
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 AHALCLSERQIKIWFQNRRMKWKKD 266
>gi|431822413|ref|NP_001012293.1| homeobox protein Hox-D4 [Gallus gallus]
Length = 237
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +++ P + P + +S + Q + G A +YPWMK
Sbjct: 72 QPRGHGQEQSAPPSHFPGQAEHCPPPPMSNSRACGQQPALKAPHGSAVKQPAVVYPWMKK 131
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H S + +GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
IWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 192 IWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 227
>gi|380028330|ref|XP_003697858.1| PREDICTED: uncharacterized protein LOC100873059 [Apis florea]
Length = 550
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 302 VIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAH 361
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 362 TLVLSERQIKIWFQNRRMKWKKDNKLPN 389
>gi|307213515|gb|EFN88924.1| Homeotic protein deformed [Harpegnathos saltator]
Length = 531
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
Query: 191 LYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 292 IFPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 351
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAP 288
L LTERQIKIWFQNRRMK KK+ PN + + +AP
Sbjct: 352 LVLTERQIKIWFQNRRMKWKKDHKLPNTKNVRRKNANGQAP 392
>gi|158702310|gb|ABW77506.1| homeobox protein HoxB6bb [Salmo salar]
Length = 232
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+ + LYPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+
Sbjct: 125 KSSSLLYPWMQRMNSCT-AGTFGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIS 183
Query: 246 HELQLTERQIKIWFQNRRMKLKKE--VLRPN 274
H L LTERQIKIWFQNRRMK KKE V+ P+
Sbjct: 184 HALCLTERQIKIWFQNRRMKWKKENKVMNPS 214
>gi|284005067|ref|NP_001164872.1| homeobox protein Hox-A6 [Oryctolagus cuniculus]
gi|217418308|gb|ACK44310.1| homeobox A6 (predicted) [Oryctolagus cuniculus]
Length = 227
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 11/109 (10%)
Query: 168 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS V + HE G D + +YPWM+ + SC G KR+R Y+R
Sbjct: 106 SPEQQYKPDSSGVQGKALHEEGTDRKYTSPVYPWMQRMN----SCAGGPEGKRARTAYTR 161
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 162 YQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 210
>gi|301614398|ref|XP_002936684.1| PREDICTED: homeobox protein Hox-C4-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 174 SCSVSSQQDHEGEDGA---TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKE 229
+C+ + +H + +YPWMK H +S + TGG KRSR Y+R Q LELEKE
Sbjct: 152 ACTQAPTSEHPTNTASKQPIVYPWMKKIHVSSVNPNYTGGEPKRSRTAYTRQQVLELEKE 211
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
FHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 212 FHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 256
>gi|239950180|gb|ACS36775.1| abd-A [Artemia franciscana]
Length = 258
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM S + G +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 112 YPWM------SITGPNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLT 165
Query: 252 ERQIKIWFQNRRMKLKKEV 270
ERQIKIWFQNRRMKLKKE+
Sbjct: 166 ERQIKIWFQNRRMKLKKEL 184
>gi|345489354|ref|XP_001603621.2| PREDICTED: homeotic protein ultrabithorax-like [Nasonia
vitripennis]
Length = 345
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 234 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 286
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 287 LTERQIKIWFQNRRMKLKKEI 307
>gi|386782|gb|AAA36005.1| homeobox protein, partial [Homo sapiens]
Length = 99
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 9/85 (10%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
E +YPWM+S +G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEI
Sbjct: 2 AESNFRIYPWMRS---------SGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEI 52
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 53 AHTLCLTERQIKIWFQNRRMKWKKE 77
>gi|119370773|sp|Q1KL13.1|HXA4A_FUGRU RecName: Full=Homeobox protein Hox-A4a
gi|94482761|gb|ABF22381.1| homeobox protein HoxA4a [Takifugu rubripes]
Length = 255
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKTGGG-NKRSR 215
L A +G CS++S+ G +YPWMK H + + GG KRSR
Sbjct: 94 LSAAPDGGAGAIASKDCSIASEVYPGVAKGKEPVVYPWMKKVHATNITAGYNGGVPKRSR 153
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 154 TAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 212
>gi|332692533|gb|AEE90208.1| Homeobox D4a [Anguilla anguilla]
gi|385654530|gb|AFI62024.1| Hox-D4a [Anguilla japonica]
Length = 236
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 179 SQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
SQ + + A +YPWMK H + + TG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 113 SQNGIQAKQPAIVYPWMKKVHVTTVNTDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLT 172
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 173 RRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 209
>gi|392301345|gb|AFM55058.1| ultrabithorax, partial [Rhagovelia obesa]
Length = 249
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+V+ H+ T YPWM A G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 156 AVAPSPLHQQASQHTFYPWMA---IAGTFVGANGLRRRGRQTYTRYQTLELEKEFHTNHY 212
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 213 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 247
>gi|431909015|gb|ELK12606.1| Homeobox protein Hox-A6 [Pteropus alecto]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 85/127 (66%), Gaps = 10/127 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE I+ST
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQP 222
Query: 281 LDEKLEA 287
E+ EA
Sbjct: 223 SGEEAEA 229
>gi|87042409|gb|ABD16213.1| abdominal-A [Strigamia maritima]
Length = 289
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM S + G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 130 YPWM------SITGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 183
Query: 252 ERQIKIWFQNRRMKLKKEV 270
ERQIKIWFQNRRMKLKKE+
Sbjct: 184 ERQIKIWFQNRRMKLKKEM 202
>gi|151935663|gb|ABS18813.1| Hox6 [Flaccisagitta enflata]
Length = 145
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 69/104 (66%), Gaps = 12/104 (11%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
G P Q+ + DH +YPWM+S D KR RQTY+RYQTLE
Sbjct: 3 AGHPGPQEGQAAPI--DHSLNSQTPIYPWMRSQFD----------RKRGRQTYTRYQTLE 50
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+R+RRI+IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 51 LEKEFHFNRYLTRRRRIDIAHALCLTERQIKIWFQNRRMKWKKE 94
>gi|19070093|emb|CAD24770.1| HOM-C transcription factor [Oscheius tipulae]
Length = 194
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 76/123 (61%), Gaps = 19/123 (15%)
Query: 187 DGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
GA +YPWM H S + G KR R Y+R Q LELEKEFH+NKYL+RKRR+EIAH
Sbjct: 78 SGAAVYPWMTRVHSNS----SPRGEKRQRTAYTRVQVLELEKEFHFNKYLTRKRRLEIAH 133
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV---FMPAYSAALPKAN 303
L LTERQ+KIWFQNRRMK KKE ++ + P+ MP + +LP AN
Sbjct: 134 ALTLTERQVKIWFQNRRMKHKKE------------NKDFQDKPITTQMMPFPAGSLPFAN 181
Query: 304 YDW 306
+ +
Sbjct: 182 FGF 184
>gi|4760774|dbj|BAA77406.1| PLOX6-Dj [Dugesia japonica]
Length = 218
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM + + ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 98 VVYPWM----NPKMNSESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALS 153
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDE 283
LTERQIKIWFQNRRMK KK+ P ++ L++
Sbjct: 154 LTERQIKIWFQNRRMKWKKDHNIPKLNGPGTLEQ 187
>gi|46275810|ref|NP_032291.1| homeobox protein Hox-A4 [Mus musculus]
gi|26345064|dbj|BAC36181.1| unnamed protein product [Mus musculus]
gi|148666239|gb|EDK98655.1| homeobox A4 [Mus musculus]
Length = 285
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 181 QDHEGEDG--ATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
Q G G +YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLT 206
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 207 RRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243
>gi|8182211|gb|AAB28662.2| Hoxa-4 [Mus sp.]
gi|9488660|gb|AAB30705.2| Hoxa-4 [Mus sp.]
Length = 285
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 181 QDHEGEDG--ATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
Q G G +YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLT 206
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 207 RRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243
>gi|74267537|dbj|BAE44267.1| hoxB4a [Oryzias latipes]
gi|83016947|dbj|BAE53474.1| hoxB4a [Oryzias latipes]
Length = 253
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VVYPWMKKVHVNIVNSSYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 200
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 CLSERQIKIWFQNRRMKWKKDHKLPN 226
>gi|363730022|ref|XP_003640747.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730036|ref|XP_003640753.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730108|ref|XP_003640770.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|60392398|sp|Q6B3N0.1|HXA5_CHICK RecName: Full=Homeobox protein Hox-A5
gi|50956652|gb|AAT90845.1| homeodomain transcription factor [Gallus gallus]
Length = 270
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNHDASYSCKTGGGNKRSR 215
+GVG S ++ SS+Q D +T +YPWM+ H S+ G KR+R
Sbjct: 141 DGVGTSSGTEEDTPASSEQASAPSDQSTAQPSQPQIYPWMRKLH-ISHDNIGGPEGKRAR 199
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|6166218|sp|P06798.4|HXA4_MOUSE RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein MH-3
Length = 285
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 181 QDHEGEDG--ATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
Q G G +YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLT 206
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 207 RRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243
>gi|410262404|gb|JAA19168.1| homeobox A6 [Pan troglodytes]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 213
>gi|213514998|ref|NP_001134844.1| Homeobox protein Hox-D4a [Salmo salar]
gi|209736512|gb|ACI69125.1| Homeobox protein Hox-D4a [Salmo salar]
Length = 256
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +R +P A + V + QQ+ + + G +YPWMK
Sbjct: 92 QPRGHVHERASHPSPFTAQTEPCPPVQVTGPRTCGQQQNTKNQHGIQAKQPTVVYPWMKK 151
Query: 198 NHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
+H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 152 HHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIK 211
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 212 IWFQNRRMKWKKDHKLPN 229
>gi|432871988|ref|XP_004072061.1| PREDICTED: homeobox protein Hox-B4a-like, partial [Oryzias latipes]
Length = 251
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VVYPWMKKVHVNIVNSSYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 200
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 CLSERQIKIWFQNRRMKWKKDHKLPN 226
>gi|4322038|gb|AAD15929.1| homeobox protein [Petromyzon marinus]
Length = 303
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 7/89 (7%)
Query: 184 EGEDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
+GE+ +YPWMK NHD +G KRSR Y+RYQTLELEKEFH+N+YL+R+R
Sbjct: 201 DGEEAPQIYPWMKKLHLNHDGI----SGSEGKRSRTAYTRYQTLELEKEFHFNRYLTRRR 256
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIE+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 257 RIEVANALCLSERQIKIWFQNRRMKWKKD 285
>gi|300797581|ref|NP_001178016.1| homeobox protein Hox-A6 [Rattus norvegicus]
gi|392347326|ref|XP_003749802.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|392356113|ref|XP_003752227.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|149033362|gb|EDL88163.1| rCG52456 [Rattus norvegicus]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + HE G D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+DG +YPWM+ H +S G KRSR Y+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 130 QDG--VYPWMRRMHMSS--GTNGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIA 185
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L L+ERQIKIWFQNRRMK KKE
Sbjct: 186 HALGLSERQIKIWFQNRRMKWKKE 209
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Query: 190 TLYPWMKSNH--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWMK H + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 162 VMYPWMKRAHIHPGVGAAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHA 221
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
L LTERQ+KIWFQNRRMK KK+ PN +
Sbjct: 222 LGLTERQVKIWFQNRRMKWKKDHNLPNTKT 251
>gi|226822850|gb|ACO83085.1| homeobox A6 (predicted) [Dasypus novemcinctus]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + HE G D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKS 197
+P G +++G + +P + +S + S Q + +G A +YPWMK
Sbjct: 72 QPRGHGQEQSGPASHFPGQAEHCPTPPMPNSRACSQQPALKPPNGSAVKQPAVVYPWMKK 131
Query: 198 NHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIK
Sbjct: 132 VHVNSVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIK 191
Query: 257 IWFQNRRMKLKKEVLRPNI 275
IWFQNRRMK KK+ PN
Sbjct: 192 IWFQNRRMKWKKDHKLPNT 210
>gi|119364594|sp|O13074.2|HXB4A_FUGRU RecName: Full=Homeobox protein Hox-B4a; AltName: Full=FrHOXB-4
gi|94482798|gb|ABF22416.1| homeobox protein HoxB4a [Takifugu rubripes]
Length = 288
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 138 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 197
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 198 CLSERQIKIWFQNRRMKWKKDHKLPN 223
>gi|151935661|gb|ABS18812.1| Hox5, partial [Flaccisagitta enflata]
Length = 335
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
AT++PWM+ + G KR+RQTY+R+QTLELEKEFH+N+YL+R+RRIEI H L
Sbjct: 186 ATIFPWMRGT-----TGDLGIDQKRTRQTYTRHQTLELEKEFHFNRYLTRRRRIEIVHAL 240
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 241 GLTERQIKIWFQNRRMKWKKE 261
>gi|172087584|ref|XP_001913334.1| Hox4.1 [Oikopleura dioica]
gi|48994254|gb|AAT47829.1| Hox4.1 [Oikopleura dioica]
Length = 197
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 172 QDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSC----KTGGGNKRSRQTYSRYQTLE 225
QD ++ + +D +L YPWM+ H A + + G NKR R Y+R+QTLE
Sbjct: 84 QDDLGSCDSREKKSDDAKSLKIYPWMRRMHSAQLASENQQRPGNDNKRIRTAYTRHQTLE 143
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 144 LEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 187
>gi|395830946|ref|XP_003788573.1| PREDICTED: homeobox protein Hox-A6 [Otolemur garnettii]
gi|202070728|gb|ACH95316.1| homeobox A6 (predicted) [Otolemur garnettii]
Length = 233
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKALHDEGADRKYTSPVYPWMQRMNSCT-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|158296358|ref|XP_001688962.1| AGAP004646-PA [Anopheles gambiae str. PEST]
gi|157015341|gb|EDO63636.1| AGAP004646-PA [Anopheles gambiae str. PEST]
Length = 577
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQT 217
DSN D++ + H DG +YPWMK H A S + G KR R
Sbjct: 295 DSNDGDIDDLESDNDLGEDVMHATSDGERIIYPWMKKIHVAGVANGSFQPGMEPKRQRTA 354
Query: 218 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R+Q LELEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 355 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 411
>gi|73976527|ref|XP_854141.1| PREDICTED: homeobox protein Hox-A6 [Canis lupus familiaris]
gi|358411873|ref|XP_003582149.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|359064775|ref|XP_003586029.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|410952524|ref|XP_003982929.1| PREDICTED: homeobox protein Hox-A6 isoform 1 [Felis catus]
gi|281349541|gb|EFB25125.1| hypothetical protein PANDA_000658 [Ailuropoda melanoleuca]
gi|440899268|gb|ELR50597.1| Homeobox protein Hox-A6 [Bos grunniens mutus]
Length = 233
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVPGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHANSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPNTKG 220
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKDHKLPN 218
>gi|154183829|gb|ABS70769.1| Hoxa4a [Haplochromis burtoni]
Length = 247
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKTGGG-NKRS 214
G R + G + CS++++ G +YPWMK H +S + GG KRS
Sbjct: 91 GPRLTAAPDGGANASKDCSLATEVYPGVAKGKEPVVYPWMKKVHVSSVNASYNGGVPKRS 150
Query: 215 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 210
>gi|347972374|ref|XP_003436885.1| AGAP004660-PB [Anopheles gambiae str. PEST]
gi|333467595|gb|EGK96613.1| AGAP004660-PB [Anopheles gambiae str. PEST]
Length = 140
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 48 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 97
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 98 CLTERQIKIWFQNRRMKWKKE 118
>gi|213513255|ref|NP_001133000.1| homeobox protein HoxC6aa [Salmo salar]
gi|157815942|gb|ABV81990.1| homeobox protein HoxC6aa [Salmo salar]
gi|158702328|gb|ABW77519.1| homeobox protein HoxC6aa [Salmo salar]
Length = 231
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 144 KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASY 203
K G R +GL A N + D +SQ E + +YPWM+ + S
Sbjct: 82 KDGGLASCRQTTSMGLNAQ-NHIAQEYSLDQARGASQ---EQKANVQIYPWMQRMNSHS- 136
Query: 204 SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRR 263
G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRR
Sbjct: 137 GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRR 196
Query: 264 MKLKKEVLRPNISSTTMLDEKLEA 287
MK KKE N++ST E A
Sbjct: 197 MKWKKE---SNLTSTVTGSESTGA 217
>gi|391339782|ref|XP_003744226.1| PREDICTED: homeotic protein ultrabithorax-like [Metaseiulus
occidentalis]
Length = 178
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
Query: 190 TLYPWMKSNHDASYSCKTGGG----------NKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
T YPWM SY + G +R RQTY+RYQTLELEKEFH N YL+R+
Sbjct: 54 TFYPWMAIAGLNSYIARQQAGFPGFLGASGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 113
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 114 RRIEMAHALCLTERQIKIWFQNRRMKLKKEI 144
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|224045302|ref|XP_002192602.1| PREDICTED: homeobox protein Hox-A5 [Taeniopygia guttata]
Length = 348
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNHDASYSCKTGGGNKRSR 215
+GVG S ++ SS+Q D +T +YPWM+ H S+ G KR+R
Sbjct: 219 DGVGTSSGTEEDTPASSEQASAPTDQSTAQPSQPQIYPWMRKLH-ISHDNIGGPEGKRAR 277
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 278 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 331
>gi|8815563|gb|AAB19469.2| TATAA binding protein [Homo sapiens]
Length = 120
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
GV D + Q+D + E +YPWM+S +G KR RQTY+RYQ
Sbjct: 1 GVCPGDSAKAGGAKEQRDSDFAAESNFRIYPWMRS---------SGTDRKRGRQTYTRYQ 51
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELE EFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK K E
Sbjct: 52 TLELENEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKNE 98
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|449277037|gb|EMC85344.1| Homeobox protein Hox-B6 [Columba livia]
Length = 213
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 5/89 (5%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
+ E + A +YPWM+ + SC + KR RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 110 ESEEQKCSAPVYPWMQRMN----SCNSPD-RKRGRQTYTRYQTLELEKEFHFNRYLTRRR 164
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 165 RIEIAHSLCLTERQIKIWFQNRRMKWKKE 193
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|259053113|emb|CAX11343.1| abdominal A [Parasteatoda tepidariorum]
Length = 250
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM S +++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 109 YPWM-SIAALNFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 167
Query: 252 ERQIKIWFQNRRMKLKKEV 270
ERQIKIWFQNRRMKLKKE+
Sbjct: 168 ERQIKIWFQNRRMKLKKEM 186
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|4388694|emb|CAA30123.1| unnamed protein product [Xenopus laevis]
Length = 102
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 9/84 (10%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA
Sbjct: 4 EANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 54
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 55 HTLCLTERQIKIWFQNRRMKWKKE 78
>gi|213513139|ref|NP_001133052.1| homeobox protein HoxB6ab [Salmo salar]
gi|157816107|gb|ABV82072.1| homeobox protein HoxB6ab [Salmo salar]
gi|158702279|gb|ABW77477.1| homeobox protien HoxB6ab [Salmo salar]
Length = 227
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 191 LYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 187 CLTERQIKIWFQNRRMKWKKENKLINSSQTS 217
>gi|166429526|ref|NP_001107632.1| ultrabithorax [Bombyx mori]
gi|164682496|gb|ABY66345.1| homeobox protein [Bombyx mori]
gi|284924982|dbj|BAI67747.1| Ultrabithorax [Bombyx mori]
Length = 254
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Query: 171 VQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 230
+ S + ++Q H+ T YPWM G +R RQTY+RYQTLELEKEF
Sbjct: 127 LPGSAASAAQPVHQQPTNHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEF 179
Query: 231 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
H N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 180 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 219
>gi|164682494|gb|ABY66344.1| homeobox protein [Bombyx mori]
Length = 254
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Query: 171 VQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEF 230
+ S + ++Q H+ T YPWM G +R RQTY+RYQTLELEKEF
Sbjct: 127 LPGSAASAAQPVHQQPTNHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEF 179
Query: 231 HYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
H N YL+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 180 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 219
>gi|301128901|emb|CBL59363.1| HoxD5 [Scyliorhinus canicula]
Length = 252
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 9/151 (5%)
Query: 121 DKETLNATNFVPKDEAI--SEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVS 178
D +A+ P D AI + ++ D++ +P+ G SP + S
Sbjct: 92 DPAFCSASLINPSDRAIKTGAAITESSHSYSGDQDTSPLN-DGHPKGTNSPKPE-----S 145
Query: 179 SQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
Q D + +YPWMK H + +G KR+R Y+RYQTLELEKEFHYN+YL+R
Sbjct: 146 EQLDKDPARQLQIYPWMKKMH-LNQEGLSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTR 204
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 205 RRRIEIAHALCLTERQIKIWFQNRRMKWKKD 235
>gi|220898194|gb|ACL81449.1| HoxB6 [Latimeria menadoensis]
Length = 222
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 125 VYPWMQRMNSCTGS-AFGPNGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 183
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 184 TERQIKIWFQNRRMKWKKE 202
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|87042406|gb|ABD16212.1| ultrabithorax [Strigamia maritima]
Length = 267
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 152 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 204
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 205 LTERQIKIWFQNRRMKLKKEI 225
>gi|449268332|gb|EMC79201.1| Homeobox protein Hox-A5 [Columba livia]
Length = 270
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNHDASYSCKTGGGNKRSR 215
+GVG S ++ SS+Q D +T +YPWM+ H S+ G KR+R
Sbjct: 141 DGVGTSSGTEEDTPASSEQASAPTDQSTAQPSQPQIYPWMRKLH-ISHDNIGGPEGKRAR 199
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|321475840|gb|EFX86802.1| putative homeotic Ultrabithorax protein [Daphnia pulex]
Length = 380
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 272 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 324
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 325 LTERQIKIWFQNRRMKLKKEI 345
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|213512182|ref|NP_001133047.1| homeobox protein HoxB6aa [Salmo salar]
gi|157816087|gb|ABV82062.1| homeobox protein HoxB6aa [Salmo salar]
Length = 227
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 191 LYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 187 CLTERQIKIWFQNRRMKWKKENKLINSSQTS 217
>gi|837347|gb|AAB33590.1| Hoxb-4 homeodomain protein [Takifugu rubripes=Japanese puffer fish,
Peptide, 251 aa]
gi|2130556|gb|AAC60205.1| homeobox protein HOXB-4 [Takifugu rubripes]
Length = 251
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 200
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 CLSERQIKIWFQNRRMKWKKDHKLPN 226
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|291461542|dbj|BAI83405.1| antennapedia 2 [Parasteatoda tepidariorum]
Length = 327
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 226 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTL 275
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQ KIWFQNRRMK KKE
Sbjct: 276 CLTERQTKIWFQNRRMKWKKE 296
>gi|354479702|ref|XP_003502048.1| PREDICTED: homeobox protein Hox-A6-like [Cricetulus griseus]
gi|344252751|gb|EGW08855.1| Homeobox protein Hox-A6 [Cricetulus griseus]
Length = 233
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDHE-GED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + HE G D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSVQGKVLHEEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|158702267|gb|ABW77466.1| homeobox protein HoxB6aa [Salmo salar]
gi|221220700|gb|ACM09011.1| Homeobox protein Hox-B6a [Salmo salar]
Length = 227
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 191 LYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 187 CLTERQIKIWFQNRRMKWKKENKLINSSQTS 217
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|348517819|ref|XP_003446430.1| PREDICTED: homeobox protein Hox-B4a-like [Oreochromis niloticus]
Length = 258
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 145 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 204
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 205 CLSERQIKIWFQNRRMKWKKDHKLPN 230
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|149705651|ref|XP_001499526.1| PREDICTED: homeobox protein Hox-A6 [Equus caballus]
Length = 233
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS SV + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSGSVPGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|344270546|ref|XP_003407105.1| PREDICTED: homeobox protein Hox-A6-like [Loxodonta africana]
Length = 233
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Query: 173 DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
DS SV + H EG D + +YPWM+ + + G +R RQTY+RYQTLELEK
Sbjct: 114 DSSSVQGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEK 172
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 173 EFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>gi|395540362|ref|XP_003772124.1| PREDICTED: homeobox protein Hox-A5 [Sarcophilus harrisii]
Length = 269
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+Q +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 152 TPASSEQASAQSEQSPAQPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 210
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 211 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|332692488|gb|AEE90168.1| Homeobox B6a [Anguilla anguilla]
gi|385654479|gb|AFI61980.1| Hox-B6a [Anguilla japonica]
Length = 227
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 6/81 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRVN----SCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 187 CLTERQIKIWFQNRRMKWKKE 207
>gi|109944916|dbj|BAE96984.1| Ultrabithorax [Daphnia magna]
gi|109944919|dbj|BAE96986.1| Ultrabithorax [Daphnia magna]
gi|109944927|dbj|BAE96990.1| Ultrabithorax [Daphnia magna]
gi|109944930|dbj|BAE96992.1| Ultrabithorax [Daphnia magna]
Length = 369
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 262 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 314
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 315 LTERQIKIWFQNRRMKLKKEI 335
>gi|429510502|gb|AFZ94989.1| transcription factor Hox4 [Petromyzon marinus]
Length = 271
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 163 VVYPWMKKIHVSTVNPNYTGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHAL 222
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
LTERQIKIWFQNRRMK KK+ PN
Sbjct: 223 CLTERQIKIWFQNRRMKWKKDHKLPN 248
>gi|400180326|gb|AFP73294.1| Hoxa5alpha [Polyodon spathula]
Length = 275
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQQ--DHEGEDGA-----TLYPWMKSNHDASYSCKTGGGNKRSR 215
+GVG S +D SS Q G++ + +YPWM+ H S+ G KR+R
Sbjct: 146 DGVGKSSGTEDDTPASSGQTSSQNGQNASESSQPQIYPWMRKLH-MSHDSMAGPEGKRAR 204
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 258
>gi|213514608|ref|NP_001133034.1| homeobox protein HoxA5aa [Salmo salar]
gi|157816043|gb|ABV82040.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Query: 187 DGAT--LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
DGA +YPWM+ NHD+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 180 DGAQPHIYPWMRKLHINHDS----LTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRR 235
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 236 IEIAHALCLSERQIKIWFQNRRMKWKKD 263
>gi|328710879|ref|XP_001944459.2| PREDICTED: homeotic protein ultrabithorax-like [Acyrthosiphon
pisum]
Length = 339
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 236 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 288
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 289 LTERQIKIWFQNRRMKLKKEI 309
>gi|226822848|gb|ACO83083.1| homeobox A4 (predicted) [Dasypus novemcinctus]
Length = 318
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQ 216
G+ A + P +Q S + E +YPWMK H ++ + GG KRSR
Sbjct: 164 GVPAGGSAPACPLLQADRSPPGLKGKE----PVVYPWMKKIHVSAVNPSYNGGEPKRSRT 219
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 220 AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 277
>gi|431894935|gb|ELK04728.1| Homeobox protein Hox-D4 [Pteropus alecto]
Length = 253
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|18150505|gb|AAL61642.1|AF434666_1 Hox4w [Petromyzon marinus]
Length = 271
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 163 VVYPWMKKIHVSTVNPNYTGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHAL 222
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
LTERQIKIWFQNRRMK KK+ PN
Sbjct: 223 CLTERQIKIWFQNRRMKWKKDHKLPN 248
>gi|359754086|gb|AEV59509.1| HOXA5, partial [Macropus eugenii]
Length = 265
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 9/113 (7%)
Query: 165 GVG-SPDVQDSCSVSSQQDHEGEDGA-------TLYPWMKSNHDASYSCKTGGGNKRSRQ 216
GVG S +D SS+Q D + +YPWM+ H S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPAQPQIYPWMRKLH-ISHDNIGGPEGKRART 199
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|391347328|ref|XP_003747916.1| PREDICTED: homeotic protein antennapedia-like [Metaseiulus
occidentalis]
Length = 263
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 10/85 (11%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+D + LYPWM+S + KR RQTY+R+QTLELEKEF +N+YL+R+RRIEI
Sbjct: 172 SKDCSLLYPWMRSQFE----------RKRGRQTYTRFQTLELEKEFRFNRYLTRRRRIEI 221
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 222 AHALCLTERQIKIWFQNRRMKWKKE 246
>gi|345322207|ref|XP_003430544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ornithorhynchus anatinus]
Length = 281
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELE 227
P V S SS EG ++PWM+ H + + TGG KRSR Y+R Q LELE
Sbjct: 151 PRVPPEPSASSTAATEG-PAPQIFPWMRKLHISHVNPNYTGGEPKRSRTAYTRQQVLELE 209
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNI 275
KEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 210 KEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNT 257
>gi|151935659|gb|ABS18811.1| Hox4 [Flaccisagitta enflata]
Length = 288
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 183 HEGEDGA-TLYPWMKSNHDA-SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H G A +YPWMK H A S G KR+R Y+R+Q LELEKEFH+N+YL+R+R
Sbjct: 100 HNGNGQAPVIYPWMKKVHVATSNGTNFAGEPKRARTAYTRHQVLELEKEFHFNRYLTRRR 159
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
RIEIAH L LTERQIKIWFQNRRMK KK+ PN +
Sbjct: 160 RIEIAHALCLTERQIKIWFQNRRMKWKKDHKLPNTKTV 197
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|259053107|emb|CAX11340.1| ultrabithorax [Parasteatoda tepidariorum]
Length = 265
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 138 TFYPWMAVQGP-------NGMRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLC 190
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 191 LTERQIKIWFQNRRMKLKKEI 211
>gi|146324917|sp|A2D5Y4.1|HXA5_LEMCA RecName: Full=Homeobox protein Hox-A5
gi|122938186|gb|ABM68948.1| HOXA5 [Lemur catta]
Length = 270
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|3445430|emb|CAA07499.1| homeobox protein [Cupiennius salei]
Length = 172
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 74 SPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 123
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 124 CLTERQIKIWFQNRRMKWKKE 144
>gi|311272691|ref|XP_003133546.1| PREDICTED: homeobox protein Hox-D4-like [Sus scrofa]
Length = 257
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKDHKLPN 218
>gi|193952|gb|AAA20072.1| homeobox protein [Mus musculus]
Length = 248
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 127 AVVYPWMKKVHVNSANPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 186
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 187 LCLSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|254692762|dbj|BAH23876.2| transcription factor Hox7 [Balanoglossus misakiensis]
Length = 246
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 74/112 (66%), Gaps = 16/112 (14%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQT 217
GL+ N + SPD SV+ Q+ TLYPW+ + KR RQT
Sbjct: 111 GLKDHCNPLASPD-----SVAQVQNP-----TTLYPWVNAAGMPEVP------KKRCRQT 154
Query: 218 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 155 YTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 206
>gi|254692756|dbj|BAH23873.2| transcription factor Hox4 [Balanoglossus misakiensis]
Length = 209
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 191 LYPWMKSNH--DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + G +KR+R Y+RYQ LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 97 MYPWMKRAHIHPGVGTAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHAL 156
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISS 277
LTERQ+KIWFQNRRMK KK+ PN +
Sbjct: 157 GLTERQVKIWFQNRRMKWKKDHNLPNTKT 185
>gi|123241|sp|P24061.1|HXA7_COTJA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Quox-1
gi|213618|gb|AAA49501.1| homeobox gene [Coturnix coturnix]
Length = 242
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 112 GRGQFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEY 162
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 163 AHALCLTERQIKIWFQNRRMKWKKE 187
>gi|47217000|emb|CAG01628.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 675 IYPWMQRMNACNGTFGSPG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 732
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 733 TERQIKIWFQNRRMKWKKE 751
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
+++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ I
Sbjct: 237 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQGCI 283
>gi|86515384|ref|NP_001034518.1| homeobox protein abdominal-A homolog [Tribolium castaneum]
gi|6016229|sp|Q07961.2|ABDA_TRICA RecName: Full=Homeobox protein abdominal-A homolog
gi|2394295|gb|AAB70262.1| abdominal-AII [Tribolium castaneum]
gi|270002801|gb|EEZ99248.1| abdominal-A [Tribolium castaneum]
Length = 343
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 170 DVQDSCSVSSQQDHEGEDGATLYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTL 224
D +SCS + + YPWM S D G +R RQTY+R+QTL
Sbjct: 170 DPLNSCSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTL 229
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 230 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 275
>gi|397911062|gb|AFO68807.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 262
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + S G + KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 143 VYPWMKKVHSNTGSTSYNGQDPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 202
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV 290
LTERQIKIWFQNRRMK KK+ PN + + P V
Sbjct: 203 LTERQIKIWFQNRRMKWKKDNRLPNTKTRSSSASGGSGPAV 243
>gi|260835437|ref|XP_002612715.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
gi|229298094|gb|EEN68724.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
Length = 122
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H ++S TG NKR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 27 MYPWMRKIH-LNHSAGTGD-NKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 84
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 85 TERQIKIWFQNRRMKWKKE 103
>gi|126341819|ref|XP_001362736.1| PREDICTED: homeobox protein Hox-A5-like [Monodelphis domestica]
Length = 269
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 9/113 (7%)
Query: 165 GVG-SPDVQDSCSVSSQQDHEGEDGA-------TLYPWMKSNHDASYSCKTGGGNKRSRQ 216
GVG S +D SS+Q D + +YPWM+ H S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPAQPQIYPWMRKLH-ISHDNIGGPEGKRART 199
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|305377066|ref|NP_001182161.1| homeobox protein Hox-A5 [Sus scrofa]
gi|217620801|gb|ACK56050.1| homeobox A5 [Sus scrofa]
gi|217620820|gb|ACK56051.1| homeobox A5 [Sus scrofa]
Length = 270
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|149705654|ref|XP_001499628.1| PREDICTED: homeobox protein Hox-A5-like [Equus caballus]
Length = 270
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|297288644|ref|XP_001092687.2| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Macaca mulatta]
Length = 468
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 351 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 409
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 410 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 451
>gi|395830948|ref|XP_003788574.1| PREDICTED: homeobox protein Hox-A5 [Otolemur garnettii]
gi|202070727|gb|ACH95315.1| homeobox A5 (predicted) [Otolemur garnettii]
Length = 270
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|123298|sp|P17278.1|HXD4_CHICK RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-A; Short=Chox-A
Length = 235
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 121 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 180
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 181 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 225
>gi|390178469|ref|XP_003736653.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859455|gb|EIM52726.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 360
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 190 TLYPWMKSNHDASY--SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
T YPWM + + T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 242 TFYPWMAIAGECPEDPTKSTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 301
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 302 LCLTERQIKIWFQNRRMKLKKEI 324
>gi|363746032|ref|XP_003643502.1| PREDICTED: homeobox protein Hox-C6-like [Gallus gallus]
Length = 237
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
E + +YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRI
Sbjct: 114 QEQKTSIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRI 172
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
EIA+ L LTERQIKIWFQNRRMK KKE N+SST
Sbjct: 173 EIANALCLTERQIKIWFQNRRMKWKKE---SNLSST 205
>gi|274317370|ref|NP_001069602.2| homeobox protein Hox-A4 [Bos taurus]
gi|296488417|tpg|DAA30530.1| TPA: homeobox A4 isoform 1 [Bos taurus]
Length = 319
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 196
PP R P R +P V S + + G G +YPWMK
Sbjct: 139 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 198
Query: 197 SNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQI 255
H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+
Sbjct: 199 KIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 258
Query: 256 KIWFQNRRMKLKKEVLRPN 274
KIWFQNRRMK KK+ PN
Sbjct: 259 KIWFQNRRMKWKKDHKLPN 277
>gi|190576600|gb|ACE79088.1| homeobox A5 (predicted) [Sorex araneus]
Length = 468
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 351 APASSEPASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 409
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 410 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 451
>gi|348522887|ref|XP_003448955.1| PREDICTED: homeobox protein Hox-A4 [Oreochromis niloticus]
Length = 305
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCK-TGGGNKRS 214
G R + G + CS++++ G +YPWMK H +S + GG KRS
Sbjct: 149 GPRLAAAPDGGANASKDCSLATEVYPGVAKGKEPVVYPWMKKVHVSSVNASYNGGVPKRS 208
Query: 215 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 209 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 268
>gi|297272473|ref|XP_001087920.2| PREDICTED: hypothetical protein LOC696226 [Macaca mulatta]
Length = 1147
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 133 VVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHAL 192
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNI 275
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 193 CLSERQIKIWFQNRRMKWKKDHKLPNT 219
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 930 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 989
Query: 268 KEV 270
++
Sbjct: 990 RQT 992
>gi|313240264|emb|CBY32609.1| unnamed protein product [Oikopleura dioica]
Length = 194
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 172 QDSCSVSSQQDHEGEDGATL--YPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEK 228
QD ++ + +D +L YPWM+ H A + G NKR R Y+R+QTLELEK
Sbjct: 84 QDDLGSCDSREKKSDDAKSLKIYPWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLELEK 143
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 144 EFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 184
>gi|74267511|dbj|BAE44254.1| hoxA7a [Oryzias latipes]
gi|83016928|dbj|BAE53460.1| hoxA7a [Oryzias latipes]
Length = 215
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 174 SCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 233
SC ++ +YPWM+++ KR RQTYSRYQTLELEKEFH+N
Sbjct: 95 SCHPGPGPHFPPQNKHRMYPWMQASDP---------NRKRGRQTYSRYQTLELEKEFHFN 145
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+YLSR+RR+EIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 146 RYLSRRRRVEIAHALTLTERQIKIWFQNRRMKWKKD 181
>gi|345323595|ref|XP_003430728.1| PREDICTED: homeobox protein Hox-A5-like [Ornithorhynchus anatinus]
Length = 269
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 9/113 (7%)
Query: 165 GVG-SPDVQDSCSVSSQQDHEGEDGA-------TLYPWMKSNHDASYSCKTGGGNKRSRQ 216
GVG S +D SS+Q D + +YPWM+ H S+ G KR+R
Sbjct: 141 GVGTSSGTEDDTPASSEQASAQSDQSPAQPSQPQIYPWMRKLH-ISHDNIGGPEGKRART 199
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|327275820|ref|XP_003222670.1| PREDICTED: homeobox protein Hox-B8-like [Anolis carolinensis]
Length = 244
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 82/129 (63%), Gaps = 12/129 (9%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDGA----TLYPWMKSNHDASYSCKTGGGNKRSRQT 217
D++ V PD + + S + +D + + + L+PWM+ A G +R RQT
Sbjct: 102 DADLVQYPDCKLASSGALSEDADNAEQSPSPTQLFPWMRPQAAA--------GRRRGRQT 153
Query: 218 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
YSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE + S
Sbjct: 154 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 213
Query: 278 TTMLDEKLE 286
+ E+LE
Sbjct: 214 SKCEQEELE 222
>gi|217035826|gb|ACJ74383.1| Hox4 [Branchiostoma lanceolatum]
Length = 278
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + S G + KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 153 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 212
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV 290
LTERQIKIWFQNRRMK KK+ PN + + P V
Sbjct: 213 LTERQIKIWFQNRRMKWKKDNRLPNTKTRSSSASGGSGPAV 253
>gi|351704296|gb|EHB07215.1| Homeobox protein Hox-A6 [Heterocephalus glaber]
Length = 233
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS +V + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSTVQGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|198453478|ref|XP_001359215.2| Dfd [Drosophila pseudoobscura pseudoobscura]
gi|198132373|gb|EAL28360.2| Dfd [Drosophila pseudoobscura pseudoobscura]
Length = 604
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 435
>gi|81673924|gb|AAI09945.1| Homeobox A4 [Bos taurus]
Length = 253
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 196
PP R P R +P V S + + G G +YPWMK
Sbjct: 73 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 132
Query: 197 SNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQI 255
H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH+L L+ERQ+
Sbjct: 133 KIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHKLCLSERQV 192
Query: 256 KIWFQNRRMKLKKEVLRPN 274
KIWFQNRRMK KK+ PN
Sbjct: 193 KIWFQNRRMKWKKDHKLPN 211
>gi|195152073|ref|XP_002016961.1| GL22041 [Drosophila persimilis]
gi|194112018|gb|EDW34061.1| GL22041 [Drosophila persimilis]
Length = 602
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 435
>gi|109944949|dbj|BAE97004.1| Ultrabithorax [Procambarus clarkii]
gi|109944952|dbj|BAE97006.1| Ultrabithorax [Procambarus clarkii]
Length = 233
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 190 TLYPWMK--SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
T YPWM + ++ ++ G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 98 TFYPWMAIAARNNCPWTSGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 157
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 158 PCLTERQIKIWFQNRRMKLKKEI 180
>gi|332259413|ref|XP_003278784.1| PREDICTED: homeobox protein Hox-B4 [Nomascus leucogenys]
Length = 251
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 158 GLRADSNGVGSPDVQDSCS---VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KR 213
G R ++ SP Q C+ + H +YPWM+ H ++ + GG KR
Sbjct: 107 GQRCEAVSSSSP--QPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKR 164
Query: 214 SRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRP 273
SR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ P
Sbjct: 165 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLP 224
Query: 274 N 274
N
Sbjct: 225 N 225
>gi|133740636|emb|CAL91856.1| sex comb reduced-1 [Cupiennius salei]
Length = 110
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 3 IYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 62
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KKE
Sbjct: 63 SERQIKIWFQNRRMKWKKE 81
>gi|293358572|ref|XP_002729358.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
gi|392347314|ref|XP_003749796.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
Length = 285
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 181 QDHEGEDG--ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLS 237
Q G G +YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLT 206
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 207 RRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243
>gi|120974241|gb|ABM46661.1| HOXA5 [Gorilla gorilla]
Length = 216
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 99 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 157
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 158 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 199
>gi|2394296|gb|AAB70263.1| abdominal-A [Tribolium castaneum]
Length = 284
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 170 DVQDSCSVSSQQDHEGEDGATLYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTL 224
D +SCS + + YPWM S D G +R RQTY+R+QTL
Sbjct: 111 DPLNSCSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTL 170
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 171 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 216
>gi|225581120|gb|ACN94691.1| GA15291 [Drosophila miranda]
Length = 607
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 341 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 400
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 401 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 435
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 114 bits (286), Expect = 5e-23, Method: Composition-based stats.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 1249 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 1308
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 1309 LCLSERQIKIWFQNRRMKWKKDHKLPN 1335
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 11/107 (10%)
Query: 166 VGSPDVQDSC-SVSSQQDH--EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
V PD + S ++ DH + + ++PWM+ + G +R RQTYSR+Q
Sbjct: 498 VQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQ 549
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 550 TLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 596
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 33/170 (19%)
Query: 155 NPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMK---SNHDASYSCKT---- 207
NP G G P+ S + S+Q ++PWMK N SC+
Sbjct: 2058 NPGGGVPAKKPKGGPNASSSSATISKQ---------IFPWMKESRQNSKQKNSCRPPSLP 2108
Query: 208 -------------GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 254
G +KR R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L LTERQ
Sbjct: 2109 PCPGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 2168
Query: 255 IKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMP----AYSAALP 300
IKIWFQNRRMK KK+ I + +PP+ AYS LP
Sbjct: 2169 IKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPPLGGAAGHVAYSGQLP 2218
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 190 TLYPWMKSNHDASYSCKT---GGGNKRS--RQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+ + WMK +AS K G N S R +S Q ELEKEFH+NKYL+R RRIEI
Sbjct: 2904 STFEWMKVKRNASKKSKLAQYGTANPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEI 2963
Query: 245 AHELQLTERQIKIWFQNRRMKLKK 268
A+ LQL + Q+KIWFQNRRMK KK
Sbjct: 2964 ANCLQLNDTQVKIWFQNRRMKQKK 2987
>gi|351713531|gb|EHB16450.1| Homeobox protein Hox-B5 [Heterocephalus glaber]
Length = 245
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 6/110 (5%)
Query: 163 SNGVGSPD---VQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
S+ +GSP Q +S EG+ ++PWM+ H + TG KR+R Y+
Sbjct: 122 SSQLGSPSRARAQPEPMATSTAAPEGQ-APQIFPWMRKLHISH--DMTGPDGKRARTAYT 178
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 179 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 228
>gi|213512343|ref|NP_001135147.1| homeobox protein HoxB6ba [Salmo salar]
gi|157816119|gb|ABV82078.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+ + LYPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+
Sbjct: 122 DKSSLLYPWMQRMSSCT-AGTLGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIS 180
Query: 246 HELQLTERQIKIWFQNRRMKLKKE--VLRPN 274
H L LTERQIK WFQNRRMK KKE V+ P+
Sbjct: 181 HALCLTERQIKTWFQNRRMKWKKENKVMNPS 211
>gi|155371905|ref|NP_001094557.1| homeobox protein Hox-D4 [Bos taurus]
gi|154425967|gb|AAI51500.1| HOXD4 protein [Bos taurus]
gi|296490701|tpg|DAA32814.1| TPA: homeobox D4 [Bos taurus]
Length = 258
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 134 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 193
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 LCLSERQIKIWFQNRRMKWKKDHKLPN 220
>gi|1334709|emb|CAA36898.1| unnamed protein product [Gallus gallus]
Length = 225
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 111 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 170
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 171 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 215
>gi|348562277|ref|XP_003466937.1| PREDICTED: homeobox protein Hox-B5-like isoform 1 [Cavia porcellus]
Length = 270
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 6/110 (5%)
Query: 163 SNGVGSPDV---QDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
S+ +GSP + Q +S EG+ ++PWM+ H + TG KR+R Y+
Sbjct: 147 SSQLGSPSLARAQPEPMATSTAAPEGQ-APQIFPWMRKLHISH--DMTGPDGKRARTAYT 203
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 204 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|328710877|ref|XP_001944629.2| PREDICTED: homeobox protein abdominal-A homolog [Acyrthosiphon
pisum]
Length = 369
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Query: 192 YPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
YPWM S D G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH
Sbjct: 203 YPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 262
Query: 247 ELQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 263 ALCLTERQIKIWFQNRRMKLKKEL 286
>gi|313234711|emb|CBY10664.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Query: 172 QDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSC-KTGGGNKRSRQTYSRYQTLELEK 228
QD ++++ +D +L YPWM+ H A + + G NKR R Y+R+QTLELEK
Sbjct: 44 QDDLGSCDSRENKSDDAKSLKIYPWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLELEK 103
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+RKRRIEIA LQL+ERQ+KIWFQNRRMK KKE
Sbjct: 104 EFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKE 144
>gi|255755649|dbj|BAH96550.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 248
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 79/119 (66%), Gaps = 10/119 (8%)
Query: 171 VQDSCSVSSQQDH--EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
++D CS S D + ++ TLYPW+ + KR RQTY+RYQTLELEK
Sbjct: 113 LKDHCSPLSSADSIAQVQNPTTLYPWVNAAGMPEVP------KKRCRQTYTRYQTLELEK 166
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN--ISSTTMLDEKL 285
EFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE + + I+S T E L
Sbjct: 167 EFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKKDDSEITSDTQNQESL 225
>gi|116004415|ref|NP_001070566.1| homeobox protein Hox-A5 [Bos taurus]
gi|73976525|ref|XP_539487.2| PREDICTED: homeobox protein Hox-A5 [Canis lupus familiaris]
gi|110279014|sp|Q2HJ67.1|HXA5_BOVIN RecName: Full=Homeobox protein Hox-A5
gi|87578311|gb|AAI13285.1| Homeobox A5 [Bos taurus]
gi|170649678|gb|ACB21263.1| homeobox A5 (predicted) [Callicebus moloch]
gi|296488406|tpg|DAA30519.1| TPA: homeobox protein Hox-A5 [Bos taurus]
Length = 270
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|58382031|ref|XP_311623.2| AGAP004661-PA [Anopheles gambiae str. PEST]
gi|55242655|gb|EAA45000.2| AGAP004661-PA [Anopheles gambiae str. PEST]
Length = 327
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 20/149 (13%)
Query: 142 DGKPPGFNMDRNGNPV---GLRADSNGVGSPDVQDSCSVSSQQDHEG-------EDGATL 191
D + G+ G+PV G A + GV + CS++ + + T
Sbjct: 147 DSRVGGYIDASGGSPVSRAGSAAAATGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206
Query: 192 YPWMKSNHDASYSCKTG----------GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
YPWM G G +R RQTY+RYQTLELEKEFH N YL+R+RR
Sbjct: 207 YPWMAIAGKRYSESLAGTLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRR 266
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEV 270
IE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 267 IEMAHALCLTERQIKIWFQNRRMKLKKEI 295
>gi|385654481|gb|AFI61982.1| Hox-B4a [Anguilla japonica]
Length = 243
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 125 VVYPWMKKVHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 184
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 185 CLSERQIKIWFQNRRMKWKKDHKLPN 210
>gi|348585693|ref|XP_003478605.1| PREDICTED: homeobox protein Hox-D4-like [Cavia porcellus]
Length = 254
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 130 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 189
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 190 LCLSERQIKIWFQNRRMKWKKDHKLPN 216
>gi|146324916|sp|A2D5K9.1|HXA5_LAGLA RecName: Full=Homeobox protein Hox-A5
gi|122934911|gb|ABM68201.1| HOXA5 [Lagothrix lagotricha]
gi|167427228|gb|ABZ80209.1| homeobox A5 (predicted) [Callithrix jacchus]
Length = 270
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|410901717|ref|XP_003964342.1| PREDICTED: homeobox protein Hox-B4a-like [Takifugu rubripes]
Length = 297
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 171 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 230
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 231 CLSERQIKIWFQNRRMKWKKDHKLPN 256
>gi|30047742|gb|AAH50442.1| Homeobox C4 [Homo sapiens]
gi|167773153|gb|ABZ92011.1| homeobox C6 [synthetic construct]
gi|312153060|gb|ADQ33042.1| homeobox C4 [synthetic construct]
Length = 264
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPSYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|154183798|gb|ABS70741.1| Hoxb5a [Haplochromis burtoni]
Length = 309
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query: 172 QDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
Q+ S + G + T ++PWM+ H + TG KR+R Y+RYQTLELEKE
Sbjct: 195 QEGGPTGSAAGNTGSEAQTPQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKE 252
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
FH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 253 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 292
>gi|431909014|gb|ELK12605.1| Homeobox protein Hox-A5 [Pteropus alecto]
Length = 231
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 114 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 172
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 173 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 214
>gi|410901643|ref|XP_003964305.1| PREDICTED: homeobox protein Hox-B8a-like [Takifugu rubripes]
Length = 283
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 17/104 (16%)
Query: 175 CSVSSQQDHEGEDG---------ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
C + Q GED L+PWM+ + G +R RQTYSRYQTLE
Sbjct: 112 CKLGGAQGLGGEDAEGTEQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTLE 163
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 164 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|348517817|ref|XP_003446429.1| PREDICTED: homeobox protein Hox-B5a-like [Oreochromis niloticus]
Length = 309
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 172 QDSCSVSSQQDHEGEDGAT--LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
Q+ S + G + T ++PWM+ +HD TG KR+R Y+RYQTLEL
Sbjct: 195 QEGGPTGSAAGNTGSEAQTPQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLEL 249
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 250 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 292
>gi|348517813|ref|XP_003446427.1| PREDICTED: homeobox protein Hox-B6a-like [Oreochromis niloticus]
Length = 284
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 14/121 (11%)
Query: 149 NMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTG 208
+ R VGL A G+ ++D S S +YPWM+ + + + +
Sbjct: 150 GVQRKTECVGLSA--KGLFGETMEDKQSAS----------VPIYPWMQRMNACNGTFSSP 197
Query: 209 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 198 G--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 255
Query: 269 E 269
E
Sbjct: 256 E 256
>gi|332242656|ref|XP_003270499.1| PREDICTED: homeobox protein Hox-A6 [Nomascus leucogenys]
Length = 233
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SPD Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPDQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|195446494|ref|XP_002070806.1| GK12253 [Drosophila willistoni]
gi|194166891|gb|EDW81792.1| GK12253 [Drosophila willistoni]
Length = 599
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 344 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 403
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 404 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 438
>gi|281182590|ref|NP_001162368.1| homeobox protein Hox-A5 [Papio anubis]
gi|114612539|ref|XP_519011.2| PREDICTED: homeobox protein Hox-A5 isoform 2 [Pan troglodytes]
gi|297680784|ref|XP_002818148.1| PREDICTED: homeobox protein Hox-A5 [Pongo abelii]
gi|426355744|ref|XP_004045268.1| PREDICTED: homeobox protein Hox-A5 [Gorilla gorilla gorilla]
gi|160904219|gb|ABX52203.1| homeobox A5 (predicted) [Papio anubis]
gi|410207368|gb|JAA00903.1| homeobox A5 [Pan troglodytes]
gi|410249078|gb|JAA12506.1| homeobox A5 [Pan troglodytes]
gi|410249080|gb|JAA12507.1| homeobox A5 [Pan troglodytes]
gi|410333157|gb|JAA35525.1| homeobox A5 [Pan troglodytes]
Length = 270
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|47213840|emb|CAG00644.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 93/185 (50%), Gaps = 34/185 (18%)
Query: 111 NHTDYLRTNSDKETLNATNFVPKDEAISE-MVDGKPPGFNMDRNGNPVGLRADSNGVGS- 168
+TD LR S T A N K S G + G P D N VG+
Sbjct: 31 GYTDPLRHYSSAATYGAANVQEKVYPASYYQQTGAAAIYGRAAGGAPC----DYNPVGTF 86
Query: 169 -PDVQDSCSVSSQQDH--------------------------EGEDGATLYPWMKSNHDA 201
D + SC+ SS+ D + + +YPWM+ +A
Sbjct: 87 YKDAEGSCAFSSRDDQPLFVTQEHQPRKAECSEQSVAMGGGIDDKSSTLIYPWMQ-RMNA 145
Query: 202 SYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
+ G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEI+H L LTERQIKIWFQN
Sbjct: 146 CSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQN 205
Query: 262 RRMKL 266
RRMKL
Sbjct: 206 RRMKL 210
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 306 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 352
>gi|397472867|ref|XP_003807955.1| PREDICTED: homeobox protein Hox-A5 [Pan paniscus]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|255742477|gb|ACU32589.1| homeobox protein HoxD4 [Callorhinchus milii]
Length = 238
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 76/121 (62%), Gaps = 9/121 (7%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDG--------ATLYPWMKSNHDASYSCK-TGGGNKRSRQ 216
G+P + +QQ H + A +YPWMK H + + TGG KRSR
Sbjct: 92 AGAPLQVSTARPCNQQQHNARNQNGTATKQPAVVYPWMKKIHVNNVNPNYTGGEPKRSRT 151
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNIS 276
Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 152 AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTK 211
Query: 277 S 277
+
Sbjct: 212 T 212
>gi|195498922|ref|XP_002096730.1| GE24883 [Drosophila yakuba]
gi|194182831|gb|EDW96442.1| GE24883 [Drosophila yakuba]
Length = 588
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 340 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 399
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 400 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 434
>gi|7837|emb|CAA28782.1| unnamed protein product [Drosophila melanogaster]
Length = 590
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|306965452|emb|CBK55567.1| ultrabithorax [Glomeris marginata]
Length = 335
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 229 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 281
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 282 LTERQIKIWFQNRRMKLKKEI 302
>gi|14916584|sp|Q9IA11.1|HXD5_HETFR RecName: Full=Homeobox protein Hox-D5
gi|7271819|gb|AAF44631.1|AF224263_1 HoxD5 [Heterodontus francisci]
Length = 252
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + +G KR+R Y+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 158 IYPWMKKMH-LNQEGLSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 216
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 217 TERQIKIWFQNRRMKWKKD 235
>gi|17137270|ref|NP_477201.1| deformed [Drosophila melanogaster]
gi|68067431|sp|P07548.2|DFD_DROME RecName: Full=Homeotic protein deformed
gi|4389426|gb|AAD19796.1| homeodomain protein [Drosophila melanogaster]
gi|23170614|gb|AAF54083.2| deformed [Drosophila melanogaster]
Length = 586
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|403287991|ref|XP_003935201.1| PREDICTED: homeobox protein Hox-A5 [Saimiri boliviensis
boliviensis]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|344270550|ref|XP_003407107.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4-like
[Loxodonta africana]
Length = 326
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 197 VVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 256
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 257 CLSERQVKIWFQNRRMKWKKDHKLPN 282
>gi|154183797|gb|ABS70740.1| Hoxb6a [Haplochromis burtoni]
Length = 284
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 14/121 (11%)
Query: 149 NMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTG 208
+ R VGL A G+ ++D S S +YPWM+ + + + +
Sbjct: 150 GVQRKTECVGLSA--KGLFGETMEDKQSAS----------VPIYPWMQRMNACNGTFSSP 197
Query: 209 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 198 G--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 255
Query: 269 E 269
E
Sbjct: 256 E 256
>gi|410934529|gb|AFV93981.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 116
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H ++S TG NKR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 6 MYPWMRKIH-LNHSAGTGD-NKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 63
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 64 TERQIKIWFQNRRMKWKKE 82
>gi|348564432|ref|XP_003468009.1| PREDICTED: homeobox protein Hox-A6-like [Cavia porcellus]
Length = 233
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS ++ + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSTIQGKALHDEGSDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|195344069|ref|XP_002038613.1| GM10914 [Drosophila sechellia]
gi|194133634|gb|EDW55150.1| GM10914 [Drosophila sechellia]
Length = 582
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|332692471|gb|AEE90153.1| Homeobox A5a [Anguilla anguilla]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|165873667|gb|ABY67958.1| lox4 hox protein [Capitella teleta]
Length = 257
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 64/97 (65%), Gaps = 8/97 (8%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G YPWM S +R RQTYSRYQTLELEKEF +N YL+RKRRIEIAH
Sbjct: 146 GIPFYPWMGVVXPNSSQ------RRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEIAHA 199
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
L LTERQIKIWFQNRRMKLKKE R I LD K
Sbjct: 200 LCLTERQIKIWFQNRRMKLKKE--RQQIKDLNGLDGK 234
>gi|387668|gb|AAA58663.1| HOX 1.3 [Homo sapiens]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|2961628|gb|AAC05784.1| homeotic protein [Pristionchus pacificus]
Length = 211
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 187 DGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
G +YPWM H+ S K GG KR R Y+R Q LELEKEFH+NKYL+RKRRIEI+H
Sbjct: 94 SGTPVYPWMTRVHNNGGSSK--GGEKRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEISH 151
Query: 247 ELQLTERQIKIWFQNRRMKLKKE 269
L L+ERQ+KIWFQNRRMK KKE
Sbjct: 152 SLMLSERQVKIWFQNRRMKHKKE 174
>gi|348564420|ref|XP_003468003.1| PREDICTED: homeobox protein Hox-A5-like [Cavia porcellus]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEPASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|195038421|ref|XP_001990656.1| GH19479 [Drosophila grimshawi]
gi|193894852|gb|EDV93718.1| GH19479 [Drosophila grimshawi]
Length = 599
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 331 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 390
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 391 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 425
>gi|123204519|gb|ABM73573.1| homeodomain protein [Megalobrama amblycephala]
Length = 201
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 72/104 (69%), Gaps = 16/104 (15%)
Query: 178 SSQQDHEGEDGAT----------LYPWMK--SNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
S QD+ + G T +YPWM+ ++H Y G +R RQTYSRYQTLE
Sbjct: 97 SLTQDYASDQGKTASQEPKGSIQIYPWMQRMNSHRVGY----GSDRRRGRQTYSRYQTLE 152
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 153 LEKEFHYNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKKE 196
>gi|71896757|ref|NP_001026158.1| homeobox protein Hox-A6 [Gallus gallus]
gi|363730223|ref|XP_003640784.1| PREDICTED: homeobox protein Hox-A6-like isoform 1 [Gallus gallus]
gi|60392397|sp|Q5YLH5.1|HXA6_CHICK RecName: Full=Homeobox protein Hox-A6
gi|34732777|gb|AAQ81318.1| HOXA6 [Gallus gallus]
Length = 231
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 14/110 (12%)
Query: 163 SNGVGSPDVQDSCSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
SNGV S V D EG D + +YPWM+ + + + G +R RQTY+
Sbjct: 113 SNGVQSKIVND----------EGTDRKYTSPVYPWMQRMNSCAGTV-YGAHGRRGRQTYT 161
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 162 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 211
>gi|109944933|dbj|BAE96994.1| Ultrabithorax [Moina macrocopa]
Length = 336
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 231 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLC 283
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 284 LTERQIKIWFQNRRMKLKKEI 304
>gi|24497517|ref|NP_061975.2| homeobox protein Hox-A5 [Homo sapiens]
gi|52788238|sp|P20719.2|HXA5_HUMAN RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1C
gi|15489147|gb|AAH13682.1| Homeobox A5 [Homo sapiens]
gi|32879831|gb|AAP88746.1| homeo box A5 [Homo sapiens]
gi|49457506|emb|CAG47052.1| HOXA5 [Homo sapiens]
gi|51094979|gb|EAL24223.1| homeo box A5 [Homo sapiens]
gi|61360384|gb|AAX41854.1| homeobox A5 [synthetic construct]
gi|119614279|gb|EAW93873.1| homeobox A5 [Homo sapiens]
gi|123994171|gb|ABM84687.1| homeobox A5 [synthetic construct]
gi|124126875|gb|ABM92210.1| homeobox A5 [synthetic construct]
gi|306921749|dbj|BAJ17954.1| homeobox A5 [synthetic construct]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|220898216|gb|ACL81469.1| HoxD4 [Latimeria menadoensis]
Length = 233
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 85/145 (58%), Gaps = 17/145 (11%)
Query: 147 GFNMDRNGNPVGLRADSNGVGS--PDVQDSCS--------VSSQQDHEGEDG------AT 190
G D P G + +G S P Q+ CS +QQ ++ + G A
Sbjct: 62 GNVQDSTEQPRGHVQEQSGPQSHFPVQQEHCSPLPIPTSRSCNQQQNKNQSGTVSKQPAI 121
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 122 VYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 181
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 LSERQIKIWFQNRRMKWKKDHKLPN 206
>gi|194899141|ref|XP_001979121.1| GG13676 [Drosophila erecta]
gi|190650824|gb|EDV48079.1| GG13676 [Drosophila erecta]
Length = 579
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|18026212|gb|AAL25807.1| sec-combs reduced protein [Euprymna scolopes]
Length = 100
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ YS G +KRSR +Y+R+QTLELEKEFHYNKYL+R+RRIEIAH L L
Sbjct: 3 IYPWMRR---MQYSQDPDGESKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNL 59
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 60 TERQIKIWFQNRRMKWKKE 78
>gi|392301351|gb|AFM55061.1| ultrabithorax, partial [Microvelia sp. AK-2011a]
Length = 245
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 65/95 (68%), Gaps = 7/95 (7%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+V+ H+ T YPWM G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 156 AVAPSPLHQQASQHTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHY 208
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 209 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 243
>gi|296488418|tpg|DAA30531.1| TPA: homeobox A4 isoform 2 [Bos taurus]
Length = 253
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSS------QQDHEGEDG--ATLYPWMK 196
PP R P R +P V S + + G G +YPWMK
Sbjct: 73 PPPPPQHRAAAPAPQRRCEAAPATPGVPSGGSAPACPLLLADKSPPGLKGKEPVVYPWMK 132
Query: 197 SNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQI 255
H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+
Sbjct: 133 KIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 192
Query: 256 KIWFQNRRMKLKKEVLRPN 274
KIWFQNRRMK KK+ PN
Sbjct: 193 KIWFQNRRMKWKKDHKLPN 211
>gi|194742024|ref|XP_001953507.1| GF17792 [Drosophila ananassae]
gi|190626544|gb|EDV42068.1| GF17792 [Drosophila ananassae]
Length = 582
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 336 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 395
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 396 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 430
>gi|225507|prf||1305251A Deformed gene
Length = 590
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|400180331|gb|AFP73299.1| Hoxa6alpha [Polyodon spathula]
Length = 226
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
++YPWM N + Y G KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA L
Sbjct: 129 GSVYPWMM-NCNGKYCSIYGSHGKRGRQTYTRHQTLELEKEFHFNRYLTRRRRIEIASAL 187
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 188 CLTERQIKIWFQNRRMKWKKE 208
>gi|355786156|gb|EHH66339.1| Homeobox protein Hox-3E [Macaca fascicularis]
Length = 206
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 77 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 136
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 137 LSERQIKIWFQNRRMKWKKDHRLPN 161
>gi|195568821|ref|XP_002102412.1| GD19895 [Drosophila simulans]
gi|194198339|gb|EDX11915.1| GD19895 [Drosophila simulans]
Length = 582
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>gi|3445436|emb|CAA07502.1| homeobox protein [Cupiennius salei]
Length = 245
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM S + G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LT
Sbjct: 123 YPWM------SIAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 176
Query: 252 ERQIKIWFQNRRMKLKKEV 270
ERQIKIWFQNRRMKLKKE+
Sbjct: 177 ERQIKIWFQNRRMKLKKEM 195
>gi|31323433|gb|AAP47018.1| HOX6/7 [Diplosoma listerianum]
Length = 126
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + G +RSRQTYSRYQTLELEKEFHYN+YL+R+RRIEIA+ L L
Sbjct: 1 VYPWMRQH---------GSQRRRSRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCL 51
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK K+E
Sbjct: 52 SERQIKIWFQNRRMKWKRE 70
>gi|154800435|ref|NP_038581.2| homeobox protein Hox-C4 [Mus musculus]
gi|585281|sp|Q08624.1|HXC4_MOUSE RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein Hox-3.5
gi|385750|gb|AAB27153.1| homeobox [Mus sp.]
gi|416420|dbj|BAA01947.1| Hox 3.5 [Mus musculus]
gi|448269|prf||1916397A Hox3.5 gene
Length = 264
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|395826614|ref|XP_003786512.1| PREDICTED: homeobox protein Hox-B4 [Otolemur garnettii]
Length = 251
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|385654458|gb|AFI61962.1| Hox-A5a [Anguilla japonica]
Length = 270
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|148671994|gb|EDL03941.1| homeobox C4 [Mus musculus]
Length = 262
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 133 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 192
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 193 LSERQIKIWFQNRRMKWKKDHRLPN 217
>gi|496849|emb|CAA83978.1| DNA-binding protein [Girardia tigrina]
Length = 203
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 71/93 (76%), Gaps = 4/93 (4%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPW+ + + ++ +KRSRQTY+RYQTLELEKEFH+NKYL+R+RRIEIAH L
Sbjct: 105 VVYPWL----NPKMNSESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHGLS 160
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLD 282
LTERQIKIWFQNRRMK KK+ P ++ +L+
Sbjct: 161 LTERQIKIWFQNRRMKWKKDHNIPKLNGPGLLN 193
>gi|158081778|ref|NP_001103354.1| homeobox protein Hox-C4 [Rattus norvegicus]
gi|149031888|gb|EDL86800.1| homeo box C4 (mapped) [Rattus norvegicus]
Length = 264
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|74267507|dbj|BAE44252.1| hoxA4a [Oryzias latipes]
gi|83016930|dbj|BAE53462.1| hoxA4a [Oryzias latipes]
Length = 249
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 80/120 (66%), Gaps = 10/120 (8%)
Query: 161 ADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNH----DASYSCKTGGGNKRS 214
A +G G+ +D CS+ S+ G +YPWMK H +ASY+ GG KRS
Sbjct: 97 APDSGAGTNASKD-CSLGSEVYPGVAKGKEPVVYPWMKKVHVSTVNASYN---GGVPKRS 152
Query: 215 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 212
>gi|410255860|gb|JAA15897.1| homeobox C4 [Pan troglodytes]
gi|410348020|gb|JAA40759.1| homeobox C4 [Pan troglodytes]
gi|410348022|gb|JAA40760.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 134 VVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 193
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 CLSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|311275744|ref|XP_003134889.1| PREDICTED: homeobox protein Hox-A4-like [Sus scrofa]
Length = 329
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 200 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 259
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 260 CLSERQVKIWFQNRRMKWKKDHKLPN 285
>gi|255742446|gb|ACU32560.1| homeobox protein HoxB6 [Callorhinchus milii]
Length = 230
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 VYPWMQRMNSSGASAFNPNG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 192 TERQIKIWFQNRRMKWKKE 210
>gi|340727729|ref|XP_003402190.1| PREDICTED: homeobox protein abdominal-A homolog isoform 2 [Bombus
terrestris]
Length = 399
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 71/106 (66%), Gaps = 12/106 (11%)
Query: 177 VSSQQDHEGEDGAT---LYPWMK-----SNHDASYSCKTGGGN----KRSRQTYSRYQTL 224
S QQ G+ G + YPWM S D + G N +R RQTY+R+QTL
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGEFDGPNGCPRRRGRQTYTRFQTL 286
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 287 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 332
>gi|148227570|ref|NP_001083341.1| homeobox D8 [Xenopus laevis]
gi|38014744|gb|AAH60408.1| MGC68588 protein [Xenopus laevis]
Length = 233
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 11/111 (9%)
Query: 162 DSNGVGSPDVQDSCS---VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTY 218
+S V PD + C+ + H+ + ++PWM++ + G +R RQTY
Sbjct: 97 ESEPVQYPDCKSPCASVGADPEHLHQNSPASHMFPWMRA--------QVAPGRRRGRQTY 148
Query: 219 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 149 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 199
>gi|32879829|gb|AAP88745.1| homeo box A5 [synthetic construct]
gi|61370206|gb|AAX43454.1| homeobox A5 [synthetic construct]
gi|61370212|gb|AAX43455.1| homeobox A5 [synthetic construct]
Length = 271
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|24647521|ref|NP_732171.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|23171493|gb|AAN13717.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|300684546|gb|ADK27789.1| LD09363p [Drosophila melanogaster]
Length = 363
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 82/138 (59%), Gaps = 22/138 (15%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM + Y
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWM-AIAGKRY 250
Query: 204 S-----------CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 253 RQIKIWFQNRRMKLKKEV 270
RQIKIWFQNRRMKLKKE+
Sbjct: 311 RQIKIWFQNRRMKLKKEI 328
>gi|4322074|gb|AAD15946.1| homeobox protein [Danio rerio]
Length = 276
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 9/101 (8%)
Query: 172 QDSCSVSSQQDHEGEDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
Q+S + S+ ++G+ ++PWM+ +HD TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|301762930|ref|XP_002916893.1| PREDICTED: homeobox protein Hox-B4-like [Ailuropoda melanoleuca]
Length = 183
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 71 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 130
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA 294
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN + APP PA
Sbjct: 131 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRS-------APPAGSPA 177
>gi|195110421|ref|XP_001999778.1| GI24717 [Drosophila mojavensis]
gi|193916372|gb|EDW15239.1| GI24717 [Drosophila mojavensis]
Length = 592
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 326 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 385
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 386 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 420
>gi|155369752|ref|NP_001094494.1| homeobox B5 [Xenopus (Silurana) tropicalis]
gi|140832837|gb|AAI35706.1| hoxb5 protein [Xenopus (Silurana) tropicalis]
Length = 258
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 10/90 (11%)
Query: 185 GEDG--ATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
G DG ++PWM+ NHD TG KR+R Y+RYQTLELEKEFH+N+YL+R+
Sbjct: 157 GTDGQNPQIFPWMRKLHINHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRR 211
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 RRIEIAHALCLSERQIKIWFQNRRMKWKKD 241
>gi|969089|gb|AAA84409.1| UBXIIA [Drosophila melanogaster]
Length = 363
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 82/138 (59%), Gaps = 22/138 (15%)
Query: 153 NGNPVGLRADSNGVGSPDVQDS-CSVSSQQD--------HEGEDGATLYPWMKSNHDASY 203
NGN G+++ G+ ++ C++S H+ + T YPWM + Y
Sbjct: 193 NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASN-HTFYPWM-AIAGKRY 250
Query: 204 S-----------CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTE 252
S T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 253 RQIKIWFQNRRMKLKKEV 270
RQIKIWFQNRRMKLKKE+
Sbjct: 311 RQIKIWFQNRRMKLKKEI 328
>gi|396184|emb|CAA48784.1| Hox-3.5 [Mus musculus]
Length = 264
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|53749656|ref|NP_571612.2| homeobox protein Hox-B5b [Danio rerio]
gi|50417206|gb|AAH78285.1| Homeo box B5b [Danio rerio]
Length = 276
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 9/101 (8%)
Query: 172 QDSCSVSSQQDHEGEDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
Q+S + S+ ++G+ ++PWM+ +HD TG KR+R Y+RYQTLELEK
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLELEK 218
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 219 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|18858851|ref|NP_571198.1| homeobox protein Hox-C6a [Danio rerio]
gi|60392438|sp|P15862.2|HXC6A_DANRE RecName: Full=Homeobox protein Hox-C6a; Short=Hox-C6; AltName:
Full=Homeobox protein Zf-61
gi|4322098|gb|AAD15958.1| homeobox protein [Danio rerio]
Length = 231
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 123 IYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 181
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAP 288
TERQIKIWFQNRRMK KKE N++ST E P
Sbjct: 182 TERQIKIWFQNRRMKWKKET---NLTSTVPGTESAGTP 216
>gi|410952542|ref|XP_003982938.1| PREDICTED: homeobox protein Hox-A4 [Felis catus]
Length = 385
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 258 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 317
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 318 CLSERQVKIWFQNRRMKWKKDHKLPN 343
>gi|57106663|ref|XP_543624.1| PREDICTED: homeobox protein Hox-C4 isoform 4 [Canis lupus
familiaris]
gi|73996160|ref|XP_856443.1| PREDICTED: homeobox protein Hox-C4 isoform 8 [Canis lupus
familiaris]
Length = 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|395835051|ref|XP_003790498.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Otolemur garnettii]
gi|395835053|ref|XP_003790499.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Otolemur garnettii]
Length = 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|60392405|sp|P09013.2|HXB5B_DANRE RecName: Full=Homeobox protein Hox-B5b; AltName: Full=Homeobox
protein Zf-54; AltName: Full=Hox-B5-like
gi|22316136|emb|CAD44458.1| homeo box protein B5b [Danio rerio]
Length = 276
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Query: 172 QDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
Q+S + S+ ++G+ ++PWM+ H + TG KR+R Y+RYQTLELEKEFH
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFH 221
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 222 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|324516905|gb|ADY46669.1| Homeobox protein lin-39 [Ascaris suum]
Length = 206
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G +YPWM H + S + G KR R Y+R Q LELEKEFH+NKYL+RKRRIEIAH
Sbjct: 92 GVAVYPWMTRVHSTNGSNR---GEKRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEIAHS 148
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L LTERQ+KIWFQNRRMK KKE
Sbjct: 149 LMLTERQVKIWFQNRRMKHKKE 170
>gi|444713455|gb|ELW54354.1| Homeobox protein Hox-A5 [Tupaia chinensis]
Length = 163
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 46 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 104
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 105 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 146
>gi|332207732|ref|XP_003252950.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Nomascus leucogenys]
gi|332207734|ref|XP_003252951.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Nomascus leucogenys]
Length = 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|395830944|ref|XP_003788572.1| PREDICTED: homeobox protein Hox-A4 [Otolemur garnettii]
gi|202070726|gb|ACH95314.1| homeobox A4 (predicted) [Otolemur garnettii]
Length = 318
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 197 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 256
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 257 CLSERQVKIWFQNRRMKWKKDHKLPN 282
>gi|444513901|gb|ELV10486.1| Homeobox protein Hox-C4 [Tupaia chinensis]
Length = 270
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 141 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHRLPN 225
>gi|410262402|gb|JAA19167.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 234 TERQIKIWFQNRRMKWKKD 252
>gi|301128886|emb|CBL59349.1| HoxB6 [Scyliorhinus canicula]
Length = 230
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 VYPWMQRMNSSGASAFNPNG-RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 192 TERQIKIWFQNRRMKWKKE 210
>gi|190576599|gb|ACE79087.1| homeobox A4 (predicted) [Sorex araneus]
Length = 298
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQ 216
G+ A + P + S + + E +YPWMK H ++ + GG KRSR
Sbjct: 147 GVPAGGSAPACPLLLADKSAAGPKGKE----PVVYPWMKKIHVSAVNPSYNGGEPKRSRT 202
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 203 AYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKKDHKLPN 260
>gi|432871986|ref|XP_004072060.1| PREDICTED: homeobox protein Hox-B5a-like, partial [Oryzias latipes]
Length = 294
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 257
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 258 TERQIKIWFQNRRMKWKKD 276
>gi|220898181|gb|ACL81437.1| HoxA5 [Latimeria menadoensis]
Length = 268
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 9/113 (7%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--------LYPWMKSNHDASYSCKTGGGNKRSRQ 216
GVG+ + + +S++ ++G + +YPWM+ H S+ G KR+R
Sbjct: 140 GVGTSSGAEDDTPASREQPSSQNGQSTAQPSQPQIYPWMRKLH-ISHDSIGGPEGKRART 198
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 199 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 251
>gi|32386|emb|CAA30376.1| unnamed protein product [Homo sapiens]
gi|11993919|gb|AAG42145.1| HOXC4 [Homo sapiens]
Length = 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRAAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|321475838|gb|EFX86800.1| putative homeotic abdominal-A protein [Daphnia pulex]
Length = 383
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 141 VDGKPPGFNMDRNGNPVGLRADSNGV---GSPDVQDS--CSVSSQQDHEGEDGATLYPWM 195
VD P + G P GL A + GV G PD+ S++ G DG+ +
Sbjct: 147 VDPNNPLSACSQGGPPTGLGALA-GVHSGGGPDIPRYPWMSITGFPYATGMDGSGSFASH 205
Query: 196 KS-NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 254
+H S G +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LTERQ
Sbjct: 206 DGFSHAGICSGPNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 265
Query: 255 IKIWFQNRRMKLKKEV 270
IKIWFQNRRMKLKKE+
Sbjct: 266 IKIWFQNRRMKLKKEL 281
>gi|281182584|ref|NP_001162367.1| homeobox protein Hox-A4 [Papio anubis]
gi|160904218|gb|ABX52202.1| homeobox A4 (predicted) [Papio anubis]
Length = 320
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 252
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 253 CLSERQVKIWFQNRRMKWKKDHKLPN 278
>gi|432112556|gb|ELK35272.1| Homeobox protein Hox-C4 [Myotis davidii]
Length = 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ GG KRSR Y+R Q LELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNYNGGEPKRSRTAYTRQQVLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNI 275
KEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 212 KEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNT 259
>gi|260835439|ref|XP_002612716.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
gi|229298095|gb|EEN68725.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
Length = 275
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + S G + KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 150 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 209
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISS 277
LTERQIKIWFQNRRMK KK+ PN +
Sbjct: 210 LTERQIKIWFQNRRMKWKKDNRLPNTKT 237
>gi|156139065|ref|NP_001095843.1| homeobox protein Hox-C4 [Bos taurus]
gi|301776118|ref|XP_002923477.1| PREDICTED: homeobox protein Hox-C4-like [Ailuropoda melanoleuca]
gi|311255481|ref|XP_001925163.2| PREDICTED: homeobox protein Hox-C4-like [Sus scrofa]
gi|133777439|gb|AAI14691.1| HOXC4 protein [Bos taurus]
gi|281342179|gb|EFB17763.1| hypothetical protein PANDA_012616 [Ailuropoda melanoleuca]
gi|296487922|tpg|DAA30035.1| TPA: homeobox C4 [Bos taurus]
gi|431921603|gb|ELK18955.1| Homeobox protein Hox-C4 [Pteropus alecto]
gi|440900711|gb|ELR51789.1| Homeobox protein Hox-C4 [Bos grunniens mutus]
Length = 264
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|74267539|dbj|BAE44268.1| hoxB5a [Oryzias latipes]
gi|83016948|dbj|BAE53475.1| hoxB5a [Oryzias latipes]
Length = 311
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 217 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 274
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 275 TERQIKIWFQNRRMKWKKD 293
>gi|348581047|ref|XP_003476289.1| PREDICTED: homeobox protein Hox-C4-like [Cavia porcellus]
gi|351706132|gb|EHB09051.1| Homeobox protein Hox-C4 [Heterocephalus glaber]
Length = 264
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|123204462|gb|ABM73560.1| homeodomain protein [Megalobrama amblycephala]
Length = 274
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Query: 172 QDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
Q+S + S+ ++G+ ++PWM+ H + TG KR+R Y+RYQTLELEKEFH
Sbjct: 165 QESVATSTTTPNDGQT-PQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFH 221
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 222 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 259
>gi|24497538|ref|NP_055435.2| homeobox protein Hox-C4 [Homo sapiens]
gi|24497540|ref|NP_705897.1| homeobox protein Hox-C4 [Homo sapiens]
gi|302565652|ref|NP_001181685.1| homeobox protein Hox-C4 [Macaca mulatta]
gi|296211864|ref|XP_002752589.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Callithrix jacchus]
gi|296211866|ref|XP_002752590.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Callithrix jacchus]
gi|332839196|ref|XP_003313692.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan troglodytes]
gi|332839198|ref|XP_003313693.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan troglodytes]
gi|397521945|ref|XP_003831043.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan paniscus]
gi|397521947|ref|XP_003831044.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan paniscus]
gi|402886203|ref|XP_003906527.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Papio anubis]
gi|402886205|ref|XP_003906528.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Papio anubis]
gi|403296837|ref|XP_003939301.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403296839|ref|XP_003939302.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Saimiri boliviensis
boliviensis]
gi|426372806|ref|XP_004053307.1| PREDICTED: homeobox protein Hox-C4 [Gorilla gorilla gorilla]
gi|281185468|sp|P09017.2|HXC4_HUMAN RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein CP19; AltName: Full=Homeobox protein Hox-3E
gi|119617150|gb|EAW96744.1| hCG2044075 [Homo sapiens]
gi|119617155|gb|EAW96749.1| hCG2043420 [Homo sapiens]
gi|208968509|dbj|BAG74093.1| homeobox C4 [synthetic construct]
gi|355564298|gb|EHH20798.1| Homeobox protein Hox-3E [Macaca mulatta]
gi|410226588|gb|JAA10513.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|340727731|ref|XP_003402191.1| PREDICTED: homeobox protein abdominal-A homolog isoform 3 [Bombus
terrestris]
Length = 399
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 69/106 (65%), Gaps = 12/106 (11%)
Query: 177 VSSQQDHEGEDGAT---LYPWMKSNHDAS---------YSCKTGGGNKRSRQTYSRYQTL 224
S QQ G+ G + YPWM S + G +R RQTY+R+QTL
Sbjct: 227 TSCQQPTTGQPGISDIPRYPWMSITDWMSPFDRVVCGDFRGPNGCPRRRGRQTYTRFQTL 286
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 287 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 332
>gi|58332666|ref|NP_001011405.1| homeobox A5 [Xenopus (Silurana) tropicalis]
gi|56789615|gb|AAH88772.1| homeobox A5 [Xenopus (Silurana) tropicalis]
Length = 274
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Query: 158 GLRADSNGVG-SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQ 216
GL A S +P D S + Q +YPWM+ H S+ G KR+R
Sbjct: 146 GLGASSGAEDDAPASSDQASSQNSQSPAPSVQPQIYPWMRKLH-ISHDNIGGPEGKRART 204
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 257
>gi|225707008|gb|ACO09350.1| Homeobox protein Hox-B6a [Osmerus mordax]
Length = 226
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 6/96 (6%)
Query: 191 LYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + +C GN +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 131 VYPWMQRMN----ACNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 186
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
LTERQIKIWFQNRRMK KKE N S T +E+
Sbjct: 187 CLTERQIKIWFQNRRMKWKKENKLINSSQTNGEEEE 222
>gi|88604724|gb|ABD46733.1| homeobox protein ultrabithorax [Endeis spinosa]
Length = 273
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+ YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 158 SFYPWMAL-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 210
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 211 LTERQIKIWFQNRRMKLKKEI 231
>gi|432882501|ref|XP_004074062.1| PREDICTED: homeobox protein Hox-A4-like [Oryzias latipes]
Length = 402
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 80/120 (66%), Gaps = 10/120 (8%)
Query: 161 ADSNGVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNH----DASYSCKTGGGNKRS 214
A +G G+ +D CS+ S+ G +YPWMK H +ASY+ GG KRS
Sbjct: 250 APDSGAGTNASKD-CSLGSEVYPGVAKGKEPVVYPWMKKVHVSTVNASYN---GGVPKRS 305
Query: 215 RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 306 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 365
>gi|432865300|ref|XP_004070515.1| PREDICTED: homeobox protein Hox-C6a-like [Oryzias latipes]
Length = 234
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE N++ST E+ A
Sbjct: 180 TERQIKIWFQNRRMKWKKE---SNLTSTVTGSEQTGA 213
>gi|255742476|gb|ACU32588.1| homeobox protein HoxD5 [Callorhinchus milii]
Length = 249
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H + G KR+R Y+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 155 IYPWMRKLH-LNQEGLGGTEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 213
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KK+ +IS T
Sbjct: 214 TERQIKIWFQNRRMKWKKDNKLKSISIT 241
>gi|291405871|ref|XP_002719360.1| PREDICTED: homeobox B5 [Oryctolagus cuniculus]
Length = 269
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
+GSP + + +G T ++PWM+ H + TG KR+R Y+RYQT
Sbjct: 149 LGSPSLARAQPEPMATSTAAPEGQTPQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQT 206
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 207 LELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 252
>gi|5002502|dbj|BAA78622.1| AmphiHox4 [Branchiostoma floridae]
Length = 275
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + S G + KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 150 VYPWMKKVHSNTGSTSYNGQDTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLG 209
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISS 277
LTERQIKIWFQNRRMK KK+ PN +
Sbjct: 210 LTERQIKIWFQNRRMKWKKDNRLPNTKT 237
>gi|426226610|ref|XP_004007433.1| PREDICTED: homeobox protein Hox-C4 [Ovis aries]
Length = 214
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 85 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 144
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 145 LSERQIKIWFQNRRMKWKKDHRLPN 169
>gi|383849603|ref|XP_003700434.1| PREDICTED: homeotic protein ultrabithorax-like [Megachile
rotundata]
Length = 329
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Query: 177 VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYL 236
V++Q + T YPWM G +R RQTY+RYQTLELEKEFH + YL
Sbjct: 203 VATQLHQQPTGSHTFYPWMAI-------AGANGMRRRGRQTYTRYQTLELEKEFHTSHYL 255
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 256 TRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKEL 289
>gi|220898192|gb|ACL81447.1| HoxB4 [Latimeria menadoensis]
Length = 247
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + + TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 129 VYPWMKKVHVNTVNPNFTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLC 188
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|405976601|gb|EKC41102.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 277
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
GE YPWM +R RQTYSRYQTLELEKEF +N YL+RKRRIE+
Sbjct: 167 GEQPTPFYPWM------GIVGPNSAHRRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEV 220
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMKLKKE
Sbjct: 221 AHSLCLTERQIKIWFQNRRMKLKKE 245
>gi|395738618|ref|XP_002818150.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4 [Pongo
abelii]
Length = 315
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 188 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 247
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 248 CLSERQVKIWFQNRRMKWKKDHKLPN 273
>gi|224086902|ref|XP_002187008.1| PREDICTED: homeobox protein Hox-B5a-like [Taeniopygia guttata]
Length = 265
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 9/104 (8%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLE 225
P Q +S EG+ ++PWM+ +HD TG KR+R Y+RYQTLE
Sbjct: 151 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLE 204
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 205 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 248
>gi|390463618|ref|XP_002748584.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4 [Callithrix
jacchus]
Length = 253
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|70778859|ref|NP_001020526.1| homeobox protein Hox-B5 [Gallus gallus]
gi|326934077|ref|XP_003213122.1| PREDICTED: homeobox protein Hox-B5a-like [Meleagris gallopavo]
gi|57235483|gb|AAW48484.1| homeodomain transcription factor [Gallus gallus]
Length = 264
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 9/104 (8%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLE 225
P Q +S EG+ ++PWM+ +HD TG KR+R Y+RYQTLE
Sbjct: 150 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISHDM-----TGPDGKRARTAYTRYQTLE 203
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 204 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|392495361|gb|AFM74330.1| homeodomain protein HoxA4ai, partial [tetraploid Carassius auratus
red var. x Megalobrama amblycephala]
Length = 206
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQDHEGEDGA--TLYPWMKSNH----DASYSCKTGGGN 211
G R + CS+ S+ + G +YPWMK H ASYS GG
Sbjct: 91 GPRLTTESCAGSAANKDCSLVSEALPGAQKGKEPVVYPWMKKVHVNSVTASYS---GGVP 147
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKD 205
>gi|332692490|gb|AEE90170.1| Homeobox B4a [Anguilla anguilla]
Length = 243
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Query: 190 TLYPWMKSNH----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+YPWMK H + +Y TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIA
Sbjct: 125 VVYPWMKKVHVNIVNPNY---TGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIA 181
Query: 246 HELQLTERQIKIWFQNRRMKLKKEVLRPN 274
H L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 HTLCLSERQIKIWFQNRRMKWKKDHKLPN 210
>gi|410952546|ref|XP_003982940.1| PREDICTED: homeobox protein Hox-A7 [Felis catus]
Length = 218
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 13/123 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G E +YPWM+S
Sbjct: 76 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGPAEANFRIYPWMRS----- 130
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 131 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 186
Query: 263 RMK 265
RMK
Sbjct: 187 RMK 189
>gi|170649677|gb|ACB21262.1| homeobox A4 (predicted) [Callicebus moloch]
Length = 324
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 197 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 256
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 257 CLSERQVKIWFQNRRMKWKKDHKLPN 282
>gi|444517709|gb|ELV11727.1| Homeobox protein Hox-B4 [Tupaia chinensis]
Length = 207
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 88 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 147
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 148 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 181
>gi|344270548|ref|XP_003407106.1| PREDICTED: homeobox protein Hox-A5-like [Loxodonta africana]
Length = 267
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H + G KR+R Y+RYQTLELE
Sbjct: 153 TPASSEQASAQSEPSPAPPAQPQIYPWMRKLHIS----HGGPEGKRARTAYTRYQTLELE 208
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 209 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 250
>gi|2209200|gb|AAB61442.1| LOX5 [Helobdella robusta]
Length = 374
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 7/100 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S + G KR+RQTY+RYQTLELEKEF+ N+YL+R+RRIEIAH L L
Sbjct: 247 IYPWMRSFVGPDF----GFDQKRTRQTYTRYQTLELEKEFYSNRYLTRRRRIEIAHSLAL 302
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV 290
+ERQIKIWFQNRRMK KKE N+ T + PPV
Sbjct: 303 SERQIKIWFQNRRMKWKKEN---NVQKLTGPGGVGDIPPV 339
>gi|47216999|emb|CAG01627.1| unnamed protein product [Tetraodon nigroviridis]
Length = 317
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 224 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 281
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 282 TERQIKIWFQNRRMKWKKD 300
>gi|348521442|ref|XP_003448235.1| PREDICTED: homeobox protein Hox-C6a-like [Oreochromis niloticus]
Length = 234
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE N++ST E+ A
Sbjct: 180 TERQIKIWFQNRRMKWKKE---SNLTSTVTGTEQTGA 213
>gi|18858847|ref|NP_571197.1| homeobox protein Hox-C4a [Danio rerio]
gi|60392444|sp|Q9PWM3.1|HXC4A_DANRE RecName: Full=Homeobox protein Hox-C4a; Short=Hox-C4
gi|4322096|gb|AAD15957.1| homeobox protein [Danio rerio]
gi|62531038|gb|AAH92923.1| Homeo box C4a [Danio rerio]
gi|182890522|gb|AAI64612.1| Hoxc4a protein [Danio rerio]
Length = 268
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 132 VVYPWMKKIHVSTVNSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 191
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 VLSERQIKIWFQNRRMKWKKDHRLPN 217
>gi|13273317|ref|NP_076921.1| homeobox protein Hox-B8 [Homo sapiens]
gi|300116176|ref|NP_001177816.1| homeobox protein Hox-B8 [Macaca mulatta]
gi|296202577|ref|XP_002748517.1| PREDICTED: homeobox protein Hox-B8 [Callithrix jacchus]
gi|335297810|ref|XP_003358122.1| PREDICTED: homeobox protein Hox-B8-like [Sus scrofa]
gi|395826622|ref|XP_003786516.1| PREDICTED: homeobox protein Hox-B8 [Otolemur garnettii]
gi|397514560|ref|XP_003827549.1| PREDICTED: homeobox protein Hox-B8 [Pan paniscus]
gi|403279483|ref|XP_003931279.1| PREDICTED: homeobox protein Hox-B8 [Saimiri boliviensis
boliviensis]
gi|426347614|ref|XP_004041444.1| PREDICTED: homeobox protein Hox-B8 [Gorilla gorilla gorilla]
gi|20141506|sp|P17481.2|HXB8_HUMAN RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4; AltName: Full=Homeobox protein Hox-2D
gi|11993911|gb|AAG42143.1| HOXB8 [Homo sapiens]
gi|119615130|gb|EAW94724.1| homeobox B8, isoform CRA_b [Homo sapiens]
gi|146327438|gb|AAI41561.1| Homeobox B8 [synthetic construct]
gi|208966500|dbj|BAG73264.1| homeobox B8 [synthetic construct]
gi|281344384|gb|EFB19968.1| hypothetical protein PANDA_005015 [Ailuropoda melanoleuca]
gi|410207798|gb|JAA01118.1| homeobox B8 [Pan troglodytes]
Length = 243
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 221
>gi|351713533|gb|EHB16452.1| Homeobox protein Hox-B7 [Heterocephalus glaber]
Length = 210
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 58/68 (85%), Gaps = 2/68 (2%)
Query: 204 SCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQN 261
S GGG KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQN
Sbjct: 121 SLARGGGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 180
Query: 262 RRMKLKKE 269
RRMK KKE
Sbjct: 181 RRMKWKKE 188
>gi|62526079|dbj|BAD95556.1| Hoxb-5 [Gallus gallus]
Length = 257
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
P Q +S EG+ ++PWM+ H + TG KR+R Y+RYQTLELEK
Sbjct: 150 PRAQAEPIATSTAATEGQ-APQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEK 206
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 207 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 247
>gi|259013344|ref|NP_001158380.1| homeobox 7 [Saccoglossus kowalevskii]
gi|116294310|gb|AAP79287.2| hox 7 [Saccoglossus kowalevskii]
Length = 263
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 12/105 (11%)
Query: 171 VQDSCSVSSQQDH------EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
++D CS S D ++ TLYPW+ + KR RQTY+RYQTL
Sbjct: 112 LKDHCSQISSADSINNVMSAMQNPTTLYPWVNATGAPEVP------KKRCRQTYTRYQTL 165
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFHYN+YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 166 ELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 210
>gi|410901647|ref|XP_003964307.1| PREDICTED: homeobox protein Hox-B5a-like [Takifugu rubripes]
gi|119370785|sp|Q1KKX9.1|HXB5A_FUGRU RecName: Full=Homeobox protein Hox-B5a
gi|94482797|gb|ABF22415.1| homeobox protein HoxB5a [Takifugu rubripes]
Length = 319
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 226 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 284 TERQIKIWFQNRRMKWKKD 302
>gi|147900209|ref|NP_001081015.1| homeobox protein Hox-C6 [Xenopus laevis]
gi|123243|sp|P02832.2|HXC6_XENLA RecName: Full=Homeobox protein Hox-C6; AltName: Full=AC1; AltName:
Full=XlHbox-1
gi|64744|emb|CAA31021.1| unnamed protein product [Xenopus laevis]
gi|54038055|gb|AAH84319.1| XlHbox1 protein [Xenopus laevis]
Length = 234
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N+SST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLSST 205
>gi|327280470|ref|XP_003224975.1| PREDICTED: homeobox protein Hox-A4-like [Anolis carolinensis]
Length = 326
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 202 VVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSL 261
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNI----SSTTMLDEKLEAP 288
L+ERQ+KIWFQNRRMK KK+ PN S+ L+++ +AP
Sbjct: 262 CLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNPPSLNQQAKAP 305
>gi|226822849|gb|ACO83084.1| homeobox A5 (predicted) [Dasypus novemcinctus]
Length = 270
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|220898205|gb|ACL81459.1| HoxC4 [Latimeria menadoensis]
Length = 260
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 132 VVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 191
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 CLSERQIKIWFQNRRMKWKKDHRLPN 217
>gi|395835047|ref|XP_003790496.1| PREDICTED: homeobox protein Hox-C6 [Otolemur garnettii]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|332692472|gb|AEE90154.1| Homeobox A4a [Anguilla anguilla]
Length = 241
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 123 ETLNATNFVPKDEAISEMVDGKPPGF---NMDRNG----------NPVG----LRADSNG 165
E A F +DEA + D PG+ N NG PV +R SN
Sbjct: 37 EPPKAPGFAHQDEAPFQRTDYPEPGYEYNNAHSNGLEDFPGHIHTQPVPQNHDIRMISNA 96
Query: 166 VGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKT--GGGNKRSRQTYSRY 221
CS+S++ + +YPWMK H + C GG KRSR Y+R
Sbjct: 97 DEGTVAPKDCSLSNETLPPAQKTKEPVVYPWMKKVHVYTV-CPNYNGGPPKRSRTAYTRQ 155
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 156 QALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPN 208
>gi|296209385|ref|XP_002751516.1| PREDICTED: uncharacterized protein LOC100410715 [Callithrix
jacchus]
Length = 716
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 589 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 648
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNI 275
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 649 CLSERQVKIWFQNRRMKWKKDHKLPNT 675
>gi|344266085|ref|XP_003405111.1| PREDICTED: homeobox protein Hox-C6-like [Loxodonta africana]
gi|444513899|gb|ELV10484.1| Homeobox protein Hox-C6 [Tupaia chinensis]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|119370789|sp|Q1KKY1.1|HXB8A_FUGRU RecName: Full=Homeobox protein Hox-B8a
gi|94482795|gb|ABF22413.1| homeobox protein HoxB8a [Takifugu rubripes]
Length = 282
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 175 CSVSSQQDHEGEDG---------ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
C + Q GED L+PWM+ G +R RQTYSRYQTLE
Sbjct: 112 CKLGGAQGLGGEDAEGTEQSPSPTQLFPWMRPQ---------AAGRRRGRQTYSRYQTLE 162
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 206
>gi|18026216|gb|AAL25809.1| antennapedia homeodomain protein [Euprymna scolopes]
Length = 93
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 8/79 (10%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 8 IYPWMRSQY--------GPHRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 59
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 60 TERQIKIWFQNRRMKWKKE 78
>gi|4322060|gb|AAD15939.1| homeobox protein [Danio rerio]
Length = 244
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQ--DHEGEDGATLYPWMKSNH----DASYSCKTGGGN 211
G R + D CS+ S + +YPWMK H ASYS GG
Sbjct: 91 GPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYS---GGVP 147
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVL 271
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
Query: 272 RPNISSTTMLDEKLEAPPV 290
PN T + L P +
Sbjct: 208 LPN---TKIAPRALHPPTI 223
>gi|110625619|ref|NP_034589.3| homeobox protein Hox-B4 [Mus musculus]
gi|123266|sp|P10284.1|HXB4_MOUSE RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6
gi|193944|gb|AAA37848.1| homeo box 2.6 (Hox-2.6) gene product [Mus musculus]
gi|74228946|dbj|BAE21943.1| unnamed protein product [Mus musculus]
gi|148684081|gb|EDL16028.1| homeobox B4 [Mus musculus]
Length = 250
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 131 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 190
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 224
>gi|51476|emb|CAA34518.1| unnamed protein product [Mus musculus]
gi|241279|gb|AAB20717.1| homeobox protein 3.3 [Mus sp.]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|348522805|ref|XP_003448914.1| PREDICTED: homeobox protein Hox-A5-like [Oreochromis niloticus]
Length = 281
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ +HD S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHISHDLS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|4758554|ref|NP_004494.1| homeobox protein Hox-C6 isoform 1 [Homo sapiens]
gi|114145519|ref|NP_034595.2| homeobox protein Hox-C6 [Mus musculus]
gi|332839194|ref|XP_003313691.1| PREDICTED: homeobox protein Hox-C6 [Pan troglodytes]
gi|390467697|ref|XP_002752511.2| PREDICTED: homeobox protein Hox-C6-like [Callithrix jacchus]
gi|392341720|ref|XP_001069410.2| PREDICTED: homeobox protein Hox-C6 isoform 1 [Rattus norvegicus]
gi|392349763|ref|XP_003750463.1| PREDICTED: homeobox protein Hox-C6 [Rattus norvegicus]
gi|395744376|ref|XP_002823404.2| PREDICTED: homeobox protein Hox-C6 [Pongo abelii]
gi|397521943|ref|XP_003831042.1| PREDICTED: homeobox protein Hox-C6 [Pan paniscus]
gi|402886201|ref|XP_003906526.1| PREDICTED: homeobox protein Hox-C6 [Papio anubis]
gi|403296835|ref|XP_003939300.1| PREDICTED: homeobox protein Hox-C6 [Saimiri boliviensis
boliviensis]
gi|426372802|ref|XP_004053305.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Gorilla gorilla
gorilla]
gi|400007|sp|P10629.2|HXC6_MOUSE RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein Hox-3.3; AltName: Full=Homeobox protein Hox-6.1
gi|115502398|sp|P09630.3|HXC6_HUMAN RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein CP25; AltName: Full=Homeobox protein HHO.C8;
AltName: Full=Homeobox protein Hox-3C
gi|7446275|pir||S72429 homeotic protein HOX C6 (clone 211) - human
gi|1836128|gb|AAB46892.1| homeodomain-containing protein [Homo sapiens]
gi|49901568|gb|AAH74845.1| Homeobox C6 [Homo sapiens]
gi|49902099|gb|AAH74844.1| Homeobox C6 [Homo sapiens]
gi|119617153|gb|EAW96747.1| homeobox C6, isoform CRA_b [Homo sapiens]
gi|148671996|gb|EDL03943.1| homeobox C6 [Mus musculus]
gi|149031890|gb|EDL86802.1| homeo box C6 [Rattus norvegicus]
gi|187954707|gb|AAI41062.1| Homeo box C6 [Mus musculus]
gi|306921741|dbj|BAJ17950.1| homeobox C6 [synthetic construct]
gi|355564296|gb|EHH20796.1| Homeobox protein Hox-3C [Macaca mulatta]
gi|355786154|gb|EHH66337.1| Homeobox protein Hox-3C [Macaca fascicularis]
gi|410226590|gb|JAA10514.1| homeobox C6 [Pan troglodytes]
gi|410255858|gb|JAA15896.1| homeobox C6 [Pan troglodytes]
gi|410348018|gb|JAA40758.1| homeobox C6 [Pan troglodytes]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|410934533|gb|AFV93983.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 100
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM++ G +R RQTYSRYQTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 5 FYPWMRT---------AGPERRRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGL 55
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMKLKKE
Sbjct: 56 TERQIKIWFQNRRMKLKKE 74
>gi|291389288|ref|XP_002711078.1| PREDICTED: homeobox C4 [Oryctolagus cuniculus]
Length = 264
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 134 IVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 193
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 CLSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|410901645|ref|XP_003964306.1| PREDICTED: homeobox protein Hox-B6a-like [Takifugu rubripes]
gi|119370787|sp|Q1KKY0.1|HXB6A_FUGRU RecName: Full=Homeobox protein Hox-B6a
gi|94482796|gb|ABF22414.1| homeobox protein HoxB6a [Takifugu rubripes]
Length = 274
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMQRMNACNGTFGSPG--RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 229 TERQIKIWFQNRRMKWKKE 247
>gi|198278433|ref|NP_001094257.1| homeo box B4 [Rattus norvegicus]
gi|149053985|gb|EDM05802.1| similar to homeotic protein Hox B4 - mouse (predicted) [Rattus
norvegicus]
gi|171847054|gb|AAI61863.1| Hoxb4 protein [Rattus norvegicus]
Length = 250
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 131 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 190
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 224
>gi|297262540|ref|XP_001108363.2| PREDICTED: hypothetical protein LOC704526 isoform 3 [Macaca
mulatta]
Length = 948
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 811 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 869
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 870 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 912
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 182 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 241
>gi|255742461|gb|ACU32574.1| homeobox protein HoxC4 [Callorhinchus milii]
Length = 256
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 65/95 (68%)
Query: 180 QQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
QQ +YPWMK H + + G KRSR Y+R Q LELEKEFHYN+YL+R+
Sbjct: 131 QQQRTNAKQPIVYPWMKKIHVNTVNHSYTGEIKRSRTAYTRQQVLELEKEFHYNRYLTRR 190
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHRLPN 225
>gi|48146025|emb|CAG33235.1| HOXC6 [Homo sapiens]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|395532651|ref|XP_003768383.1| PREDICTED: homeobox protein Hox-B8 [Sarcophilus harrisii]
gi|359754101|gb|AEV59523.1| HOXB8 [Macropus eugenii]
Length = 243
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 12/129 (9%)
Query: 162 DSNGVGSPDVQDSCSVSSQQDHEGEDGA----TLYPWMKSNHDASYSCKTGGGNKRSRQT 217
DS+ V D + + + ++ EG + + L+PWM+ A G +R RQT
Sbjct: 101 DSDLVQYADCKLAAANGLGEEAEGSEQSPSPTQLFPWMRPQAAA--------GRRRGRQT 152
Query: 218 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
YSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE + S
Sbjct: 153 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 212
Query: 278 TTMLDEKLE 286
+ E+LE
Sbjct: 213 SKCEQEELE 221
>gi|57091665|ref|XP_548179.1| PREDICTED: homeobox protein Hox-B8 [Canis lupus familiaris]
Length = 243
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 221
>gi|76825416|gb|AAI07173.1| Hoxa4 protein [Mus musculus]
Length = 187
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 60 VVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 119
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 120 CLSERQVKIWFQNRRMKWKKDHKLPN 145
>gi|297466157|ref|XP_869789.3| PREDICTED: homeobox protein Hox-C6 isoform 1 [Bos taurus]
gi|297474426|ref|XP_002687279.1| PREDICTED: homeobox protein Hox-C6 [Bos taurus]
gi|335287898|ref|XP_003355472.1| PREDICTED: homeobox protein Hox-C6-like [Sus scrofa]
gi|338726314|ref|XP_003365298.1| PREDICTED: homeobox protein Hox-C6-like isoform 1 [Equus caballus]
gi|345792344|ref|XP_003433616.1| PREDICTED: homeobox protein Hox-C6 [Canis lupus familiaris]
gi|348581051|ref|XP_003476291.1| PREDICTED: homeobox protein Hox-C6-like [Cavia porcellus]
gi|410964585|ref|XP_003988834.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Felis catus]
gi|281342177|gb|EFB17761.1| hypothetical protein PANDA_012614 [Ailuropoda melanoleuca]
gi|296487930|tpg|DAA30043.1| TPA: homeobox C6 [Bos taurus]
gi|351706134|gb|EHB09053.1| Homeobox protein Hox-C6 [Heterocephalus glaber]
gi|431921605|gb|ELK18957.1| Homeobox protein Hox-C6 [Pteropus alecto]
gi|432112558|gb|ELK35274.1| Homeobox protein Hox-C6 [Myotis davidii]
gi|440900713|gb|ELR51791.1| Homeobox protein Hox-C6 [Bos grunniens mutus]
Length = 235
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|449266120|gb|EMC77230.1| Homeobox protein Hox-C4, partial [Columba livia]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELE 227
P+ + S +S+Q +YPWMK H ++ + GG KRSR Y+R Q LELE
Sbjct: 123 PNPEHPTSTASKQ-------PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELE 175
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
KEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 176 KEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 222
>gi|363730024|ref|XP_003640748.1| PREDICTED: homeobox protein Hox-A6-like [Gallus gallus]
gi|363730225|ref|XP_003640785.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Gallus gallus]
Length = 214
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 14/110 (12%)
Query: 163 SNGVGSPDVQDSCSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
SNGV S V D EG D + +YPWM+ + + + G +R RQTY+
Sbjct: 96 SNGVQSKIVND----------EGTDRKYTSPVYPWMQRMNSCAGTV-YGAHGRRGRQTYT 144
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 145 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 194
>gi|167427227|gb|ABZ80208.1| homeobox A4 (predicted) [Callithrix jacchus]
Length = 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 195 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 254
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 255 CLSERQVKIWFQNRRMKWKKDHKLPN 280
>gi|118151296|ref|NP_001071582.1| homeobox protein Hox-B4 [Bos taurus]
gi|122132251|sp|Q08DG5.1|HXB4_BOVIN RecName: Full=Homeobox protein Hox-B4
gi|115305206|gb|AAI23762.1| Homeobox B4 [Bos taurus]
Length = 251
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|53733782|gb|AAH83307.1| Hoxc6a protein [Danio rerio]
gi|197247195|gb|AAI65049.1| Hoxc6a protein [Danio rerio]
Length = 223
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 100 IYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 158
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAP 288
TERQIKIWFQNRRMK KKE N++ST E P
Sbjct: 159 TERQIKIWFQNRRMKWKKET---NLTSTVPGTESAGTP 193
>gi|114612533|ref|XP_001162640.1| PREDICTED: homeobox protein Hox-A4 [Pan troglodytes]
Length = 320
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 252
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 253 CLSERQVKIWFQNRRMKWKKDHKLPN 278
>gi|109944946|dbj|BAE97002.1| Ultrabithorax [Porcellio scaber]
Length = 248
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 60/82 (73%), Gaps = 7/82 (8%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 117 TTFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHAL 169
Query: 249 QLTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 170 CLTERQIKIWFQNRRMKLKKEI 191
>gi|268575256|ref|XP_002642607.1| C. briggsae CBR-LIN-39 protein [Caenorhabditis briggsae]
gi|9837164|gb|AAG00456.1|AF277988_1 LIN-39 [Caenorhabditis briggsae]
Length = 253
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 177 VSSQQDHEGEDGATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNK 234
+S D + G +YPWM H TGG G KR R Y+R Q LELEKEFH +K
Sbjct: 134 ISGDDDDMEKGGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHK 188
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 189 YLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223
>gi|348521444|ref|XP_003448236.1| PREDICTED: homeobox protein Hox-C5a [Oreochromis niloticus]
Length = 227
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 7/118 (5%)
Query: 152 RNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN 211
++G + +D N + V+ + +V+ QD E +YPWM H + S
Sbjct: 110 KSGGNMSQESDRNADNTQSVKRNTNVNQPQD--SEQRPQIYPWMTKLHMSHES-----EG 162
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KRSR +Y+RYQTLELEKEFH+N+YLSR+RRIEIAH L L ERQIKIWFQNRRMK KK+
Sbjct: 163 KRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKD 220
>gi|66364492|gb|AAH95947.1| Homeo box B4 [Mus musculus]
Length = 250
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 131 SHSAFKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 190
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 224
>gi|341900549|gb|EGT56484.1| CBN-LIN-39 protein [Caenorhabditis brenneri]
Length = 252
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 64/96 (66%), Gaps = 7/96 (7%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYN 233
+S D + G +YPWM H TGG G KR R Y+R Q LELEKEFH +
Sbjct: 132 GISGDDDDMDKSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTH 186
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KYL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 187 KYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 222
>gi|332692525|gb|AEE90201.1| Homeobox C4b [Anguilla anguilla]
Length = 272
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 9/109 (8%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLE 225
+P++ +S +VS++Q +YPWMK H ++ + G KRSR Y+R Q LE
Sbjct: 118 AAPELPNS-TVSAKQ-------PVVYPWMKKIHVSTVNASYNGAEPKRSRTAYTRQQVLE 169
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 170 LEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPN 218
>gi|208966492|dbj|BAG73260.1| homeobox A4 [synthetic construct]
Length = 320
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 252
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 253 CLSERQVKIWFQNRRMKWKKDHKLPN 278
>gi|154183830|gb|ABS70770.1| Hoxa5a [Haplochromis burtoni]
Length = 281
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ +HD S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHISHDLS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|184289|gb|AAA58664.1| Hox 1.4 [Homo sapiens]
Length = 320
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 252
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 253 CLSERQVKIWFQNRRMKWKKDHKLPN 278
>gi|14916601|sp|Q9PWD3.1|HXA5_MORSA RecName: Full=Homeobox protein Hox-A5
gi|5669604|gb|AAD46398.1|AF089743_4 homeodomain protein Hox-A5 [Morone saxatilis]
Length = 281
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ NHD + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHINHDLA-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|410899256|ref|XP_003963113.1| PREDICTED: homeobox protein Hox-C6a-like [Takifugu rubripes]
gi|82227628|sp|O42504.1|HXC6A_FUGRU RecName: Full=Homeobox protein Hox-C6a; AltName: Full=FrHOXC-6
gi|2341089|gb|AAB68682.1| homeobox protein HOXC-6 [Takifugu rubripes]
gi|94482830|gb|ABF22446.1| homeobox protein HoxC6a [Takifugu rubripes]
Length = 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 4/94 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
TERQIKIWFQNRRMK KKE N++ST E+
Sbjct: 180 TERQIKIWFQNRRMKWKKE---SNLTSTVTGSEQ 210
>gi|6754232|ref|NP_034583.1| homeobox protein Hox-A5 [Mus musculus]
gi|392339939|ref|XP_003753945.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347316|ref|XP_003749797.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347328|ref|XP_003749803.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|392356115|ref|XP_003752228.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|123226|sp|P09021.1|HXA5_MOUSE RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3; AltName: Full=Homeobox protein M2
gi|51372|emb|CAA68364.1| homeo domain protein [Mus musculus]
gi|51471|emb|CAA34738.1| unnamed protein product [Mus musculus]
gi|193917|gb|AAA37838.1| homeobox 1.3 protein [Mus musculus]
gi|309314|gb|AAA37837.1| homeo domain protein [Mus musculus]
gi|148666242|gb|EDK98658.1| homeobox A5 [Mus musculus]
gi|149033363|gb|EDL88164.1| rCG52336 [Rattus norvegicus]
Length = 270
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|14916596|sp|Q9IA24.1|HXA6_HETFR RecName: Full=Homeobox protein Hox-A6
gi|7271833|gb|AAF44644.1|AF224262_6 HoxA6 [Heterodontus francisci]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 175 CSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
C+ + EG D +YPWM+ + +S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQRMNSSSSSV-FGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 209
>gi|255742448|gb|ACU32562.1| homeobox protein HoxB8 [Callorhinchus milii]
gi|387915250|gb|AFK11234.1| homeobox protein HoxB8 [Callorhinchus milii]
Length = 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 8/79 (10%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + GG +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 135 LFPWMRP--------QVAGGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 186
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 187 TERQVKIWFQNRRMKWKKE 205
>gi|325260874|gb|ADZ04664.1| homeobox C6 [Notophthalmus viridescens]
Length = 234
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
E + +YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRI
Sbjct: 114 QEQKTSIQIYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRI 172
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
EIA+ L LTERQIKIWFQNRRMK KKE N++ST
Sbjct: 173 EIANALCLTERQIKIWFQNRRMKWKKE---SNLTST 205
>gi|301128874|emb|CBL59338.1| HoxA6 [Scyliorhinus canicula]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 175 CSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
C+ + EG D +YPWM+ + +S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQRMNSSSSSV-FGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 209
>gi|359754106|gb|AEV59527.1| HOXC4 [Macropus eugenii]
Length = 263
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|354490177|ref|XP_003507236.1| PREDICTED: homeobox protein Hox-C6-like [Cricetulus griseus]
gi|344239245|gb|EGV95348.1| Homeobox protein Hox-C6 [Cricetulus griseus]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|115499494|gb|ABI98820.1| HOX-A5 [Dicentrarchus labrax]
Length = 281
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ NHD + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 187 IYPWMRKLHINHDLA-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 241
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 242 LCLSERQIKIWFQNRRMKWKKD 263
>gi|28629647|gb|AAO43029.1| HoxB4 [Latimeria menadoensis]
Length = 244
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 191 LYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + ++ TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 129 VYPWMKKVHVNPNF---TGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLC 185
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 186 LSERQIKIWFQNRRMKWKKDHKLPN 210
>gi|400180339|gb|AFP73306.1| Hoxa5beta [Polyodon spathula]
Length = 270
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQ+LELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 178 IYPWMRKLH-TSHDFMAGPEGKRARTAYTRYQSLELEKEFHFNRYLTRRRRIEIAHALCL 236
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 237 SERQIKIWFQNRRMKWKKD 255
>gi|74188415|dbj|BAE25847.1| unnamed protein product [Mus musculus]
Length = 262
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 168 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 226
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 227 SERQIKIWFQNRRMKWKKD 245
>gi|402863886|ref|XP_003896223.1| PREDICTED: homeobox protein Hox-A6-like, partial [Papio anubis]
Length = 227
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYSSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|156938|gb|AAA28375.1| deformed protein, partial [Drosophila melanogaster]
Length = 427
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 173 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 232
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 233 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 267
>gi|113205492|ref|NP_571610.1| homeobox protein Hox-A4a [Danio rerio]
gi|110282968|sp|Q9PWL5.2|HXA4A_DANRE RecName: Full=Homeobox protein Hox-A4a; AltName: Full=Homeobox
protein Zf-26; AltName: Full=Hoxx4
gi|112419000|gb|AAI22458.1| Homeo box A4a [Danio rerio]
Length = 245
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 9/123 (7%)
Query: 158 GLRADSNGVGSPDVQDSCSVSSQQ--DHEGEDGATLYPWMKSNH----DASYSCKTGGGN 211
G R + D CS+ S + +YPWMK H ASYS GG
Sbjct: 91 GPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYS---GGVP 147
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVL 271
KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
Query: 272 RPN 274
PN
Sbjct: 208 LPN 210
>gi|109067080|ref|XP_001092459.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Macaca mulatta]
gi|355560739|gb|EHH17425.1| Homeobox protein Hox-1B [Macaca mulatta]
gi|355747755|gb|EHH52252.1| Homeobox protein Hox-1B [Macaca fascicularis]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYSSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|18858853|ref|NP_571605.1| homeobox protein Hox-C6b [Danio rerio]
gi|60392445|sp|Q9PWM5.1|HXC6B_DANRE RecName: Full=Homeobox protein Hox-C6b
gi|4322100|gb|AAD15959.1| homeobox protein [Danio rerio]
Length = 227
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 71/102 (69%), Gaps = 14/102 (13%)
Query: 178 SSQQDHEGEDGAT--------LYPWMK--SNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
S QD+ + G T +YPWM+ ++H Y G +R RQ YSRYQTLELE
Sbjct: 96 SLTQDYASDQGKTVEPKGVVQIYPWMQRMNSHRVGY----GSDRRRGRQIYSRYQTLELE 151
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 152 KEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 193
>gi|148613882|ref|NP_002132.3| homeobox protein Hox-A4 [Homo sapiens]
gi|116242514|sp|Q00056.3|HXA4_HUMAN RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein Hox-1D
gi|51094980|gb|EAL24224.1| homeo box A4 [Homo sapiens]
gi|119614278|gb|EAW93872.1| homeobox A4 [Homo sapiens]
gi|182887795|gb|AAI60036.1| Homeobox A4 [synthetic construct]
Length = 320
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 252
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 253 CLSERQVKIWFQNRRMKWKKDHKLPN 278
>gi|359321212|ref|XP_539486.3| PREDICTED: homeobox protein Hox-A4 [Canis lupus familiaris]
Length = 317
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 190 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 249
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 250 CLSERQVKIWFQNRRMKWKKDHKLPN 275
>gi|301128876|emb|CBL59340.1| HoxA4 [Scyliorhinus canicula]
Length = 247
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 128 VYPWMKKIHVTTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 187
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 188 LSERQVKIWFQNRRMKWKKDHKLPN 212
>gi|86604731|ref|NP_001034510.1| transcription factor deformed [Tribolium castaneum]
gi|13241682|gb|AAK16423.1|AF321227_3 Dfd [Tribolium castaneum]
gi|1754686|gb|AAB39355.1| transcription factor Deformed [Tribolium castaneum]
gi|270002806|gb|EEZ99253.1| deformed [Tribolium castaneum]
Length = 412
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 191 LYPWMKSNHDASYSCKT---GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ H A S T G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 210 IYPWMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 269
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 270 LVLSERQIKIWFQNRRMKWKKDNKLPN 296
>gi|254212176|gb|ACT65751.1| Hoxa6 [Leucoraja erinacea]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 175 CSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
C+ + EG D +YPWM+ + +S S G +R RQTY+R+QTLELEKEFH
Sbjct: 113 CAQNKILSEEGNDRKYSTPIYPWMQRMNSSSSSV-FGPHGRRGRQTYTRFQTLELEKEFH 171
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 172 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 209
>gi|385654518|gb|AFI62014.1| Hox-C4b [Anguilla japonica]
Length = 272
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 9/109 (8%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLE 225
+P++ +S +VS++Q +YPWMK H ++ + G KRSR Y+R Q LE
Sbjct: 118 AAPELPNS-TVSAKQ-------PVVYPWMKKIHVSTVNASYNGAEPKRSRTAYTRQQVLE 169
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 170 LEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPN 218
>gi|15029697|gb|AAH11063.1| Homeo box A5 [Mus musculus]
Length = 270
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>gi|14916594|sp|Q9IA22.1|HXA4_HETFR RecName: Full=Homeobox protein Hox-A4
gi|7271831|gb|AAF44642.1|AF224262_4 HoxA4 [Heterodontus francisci]
Length = 247
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 128 VYPWMKKIHVTTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 187
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 188 LSERQVKIWFQNRRMKWKKDHKLPN 212
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 165 GVGSPDVQDSCSVSSQQDHEG--EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G E+G L+ +M S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGLVHGAAEEGCRLFVYM------SKFLLSGPDRKRGRQTYTRYQ 143
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 144 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 190
>gi|213513586|ref|NP_001133002.1| homeobox protein HoxC4aa [Salmo salar]
gi|157815946|gb|ABV81992.1| homeobox protein HoxC4aa [Salmo salar]
gi|158702316|gb|ABW77509.1| homeobox protein HoxC4aa [Salmo salar]
Length = 269
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + G +KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VVYPWMKKIHISTANPNYNGADSKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 194
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 VLSERQIKIWFQNRRMKWKKDHRLPN 220
>gi|440910521|gb|ELR60315.1| Homeobox protein Hox-B8, partial [Bos grunniens mutus]
Length = 217
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 125 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 176
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 177 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 212
>gi|405974999|gb|EKC39601.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 243
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 175 CSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 234
CS + EGE + YPWM S +R RQTY+R+QTLELEKEF +N+
Sbjct: 122 CSTGTPTTGEGETPPSFYPWM------SIVGPNSNQRRRGRQTYTRFQTLELEKEFKFNR 175
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
YL+R+RRIE++H L LTERQIKIWFQNRRMK KKE+
Sbjct: 176 YLTRRRRIELSHMLCLTERQIKIWFQNRRMKEKKEL 211
>gi|391329251|ref|XP_003739089.1| PREDICTED: uncharacterized protein LOC100908539 [Metaseiulus
occidentalis]
Length = 1486
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G +R RQTY+RYQTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLK
Sbjct: 1276 GCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 1335
Query: 268 KEV 270
KE
Sbjct: 1336 KET 1338
>gi|311267494|ref|XP_003131596.1| PREDICTED: homeobox protein Hox-B4-like [Sus scrofa]
Length = 251
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|49457548|emb|CAG47073.1| HOXA5 [Homo sapiens]
Length = 270
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNHYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>gi|403280029|ref|XP_003931541.1| PREDICTED: homeobox protein Hox-B4 [Saimiri boliviensis
boliviensis]
Length = 203
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 90 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 149
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 150 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 183
>gi|4929545|gb|AAD34033.1|AF151696_1 MAB-5 [Pristionchus pacificus]
Length = 197
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWMK S GG +KR+RQTYSR QTLELEKEFH+NKYL+RKRR EI+ L L
Sbjct: 108 VFPWMK------MSAAKGGVSKRTRQTYSRTQTLELEKEFHFNKYLTRKRRQEISESLHL 161
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 162 TERQVKIWFQNRRMKHKKE 180
>gi|387862364|gb|AFK08968.1| ultrabithorax variant a, partial [Bicyclus anynana]
Length = 234
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 144 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 196
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 197 LTERQIKIWFQNRRMKLKKEI 217
>gi|301617263|ref|XP_002938067.1| PREDICTED: homeobox protein Hox-B8-like [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 220
>gi|21755659|dbj|BAC04730.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFHSSKCEQEELE 221
>gi|440899269|gb|ELR50598.1| Homeobox protein Hox-A5 [Bos grunniens mutus]
Length = 190
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 73 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 131
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 132 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 173
>gi|209489261|gb|ACI49040.1| hypothetical protein Cbre_JD07.007 [Caenorhabditis brenneri]
Length = 252
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 64/96 (66%), Gaps = 7/96 (7%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYN 233
+S D + G +YPWM H TGG G KR R Y+R Q LELEKEFH +
Sbjct: 132 GISGDDDDMDKSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTH 186
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KYL+RKRRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 187 KYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 222
>gi|449277038|gb|EMC85345.1| Homeobox protein Hox-B5a [Columba livia]
Length = 265
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 169 PDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
P Q +S EG+ ++PWM+ H + TG KR+R Y+RYQTLELEK
Sbjct: 151 PRAQAEPIATSTAAPEGQ-APQIFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEK 207
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 208 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 248
>gi|47115878|sp|Q8T940.1|UBX_JUNCO RecName: Full=Homeotic protein ultrabithorax; AltName: Full=JcUbx
gi|18535620|gb|AAL71873.1| ultrabithorax [Junonia coenia]
Length = 253
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 145 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 197
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 198 LTERQIKIWFQNRRMKLKKEI 218
>gi|431890742|gb|ELK01621.1| Homeobox protein Hox-B5 [Pteropus alecto]
Length = 269
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|198415285|ref|XP_002124598.1| PREDICTED: similar to putative homeobox protein Hox6/7 [Ciona
intestinalis]
Length = 148
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 73/117 (62%), Gaps = 21/117 (17%)
Query: 174 SCSVSSQQDHEGEDGATLYPWMKSNH--DASYSCK-------------------TGGGNK 212
S V + ++ D +YPWM+++ + C+ TG +
Sbjct: 16 SIDVIDDETNDNSDVVPVYPWMRTHEVNTLQWICRIRCSIYCDIYITSFKQPISTGSHRR 75
Query: 213 RSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
R RQTYSR+QTLELEKEFHYN+YL+R+RRIE+AH L LTERQIKIWFQNRRMK KKE
Sbjct: 76 RGRQTYSRHQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIWFQNRRMKWKKE 132
>gi|194212079|ref|XP_001916880.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C4-like [Equus
caballus]
Length = 269
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 139 IVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSL 198
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 199 CLSERQIKIWFQNRRMKWKKDHRLPN 224
>gi|229577337|ref|NP_571613.1| homeobox protein Hox-B6b [Danio rerio]
gi|190337106|gb|AAI62868.1| Homeo box B6b [Danio rerio]
gi|190338163|gb|AAI62890.1| Homeo box B6b [Danio rerio]
Length = 224
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 191 LYPWMKSNHDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|402899487|ref|XP_003912727.1| PREDICTED: homeobox protein Hox-B4 [Papio anubis]
Length = 251
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|1333934|emb|CAA31022.1| unnamed protein product [Mus musculus]
Length = 221
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 84 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 142
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 143 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 185
>gi|400180338|gb|AFP73305.1| Hoxa6beta [Polyodon spathula]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
++YPWM ++ + S G KR RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L
Sbjct: 132 GSVYPWMMNSCNGS---NYGSHGKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANAL 188
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 189 CLTERQIKIWFQNRRMKWKKE 209
>gi|126308355|ref|XP_001372992.1| PREDICTED: homeobox protein Hox-B4-like [Monodelphis domestica]
Length = 240
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 122 SHSSCKEPVVYPWMRKVHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 181
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 RVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|345316078|ref|XP_001518990.2| PREDICTED: homeobox protein Hox-C6-like, partial [Ornithorhynchus
anatinus]
Length = 260
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 164 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 222
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 223 TERQIKIWFQNRRMKWKKE---SNLTST 247
>gi|157124733|ref|XP_001660498.1| homeotic deformed protein, putative [Aedes aegypti]
gi|108873902|gb|EAT38127.1| AAEL009950-PA [Aedes aegypti]
Length = 381
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 191 LYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 154 IYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 213
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 214 LVLSERQIKIWFQNRRMKWKKDNKLPN 240
>gi|60392424|sp|Q9YGT4.2|HXB6B_DANRE RecName: Full=Homeobox protein Hox-B6b; AltName: Full=Homeobox
protein Hox-A7
gi|22316135|emb|CAD44457.1| homeo box protein B6b [Danio rerio]
Length = 224
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 191 LYPWMKSNHDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|62826028|gb|AAH94172.1| Unknown (protein for MGC:115122) [Xenopus laevis]
Length = 234
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 5/112 (4%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGAT-LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD S ++ + + + G+ +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 98 SSLAQDFSSEQNRGNGQEQKGSIQIYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLEL 156
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE N++ST
Sbjct: 157 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE---SNLTST 205
>gi|359754097|gb|AEV59519.1| HOXB4 [Macropus eugenii]
Length = 240
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 122 SHSSCKEPVVYPWMRKVHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 181
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 RVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|1708345|sp|P52949.1|HXA5_RAT RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3
gi|204644|gb|AAA67844.1| hox1.3 protein, partial [Rattus norvegicus]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 155 IYPWMRKLH-ISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 213
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 214 SERQIKIWFQNRRMKWKKD 232
>gi|13273315|ref|NP_076920.1| homeobox protein Hox-B4 [Homo sapiens]
gi|547692|sp|P17483.2|HXB4_HUMAN RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6; AltName: Full=Homeobox protein Hox-2F
gi|11138934|gb|AAG31554.1|AF287967_4 homeobox B4 [Homo sapiens]
gi|12007115|gb|AAG45052.1| HOXB4 [Homo sapiens]
gi|29351568|gb|AAH49204.1| Homeobox B4 [Homo sapiens]
gi|119615148|gb|EAW94742.1| homeobox B4 [Homo sapiens]
Length = 251
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|395532698|ref|XP_003768405.1| PREDICTED: homeobox protein Hox-B4 [Sarcophilus harrisii]
Length = 240
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 122 SHSSCKEPVVYPWMRKVHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 181
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 RVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|114666360|ref|XP_001173043.1| PREDICTED: homeobox protein Hox-B4 [Pan troglodytes]
gi|397514562|ref|XP_003827550.1| PREDICTED: homeobox protein Hox-B4 [Pan paniscus]
Length = 251
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLEL 226
+P + S S+ +YPWM+ H + + GG KRSR Y+R Q LEL
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHVNPSYNGGEPKRSRTAYTRQQVLEL 212
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNI 275
EKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 213 EKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNT 261
>gi|123319|sp|P09080.3|HMB1_TRIGR RecName: Full=Homeobox protein HB1; AltName: Full=TGHBOX1
gi|829232|emb|CAA32660.1| TgHbox1 protein [Tripneustes gratilla]
Length = 307
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM A + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L LT
Sbjct: 173 YPWMPV---AGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLT 229
Query: 252 ERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KKE
Sbjct: 230 ERQIKIWFQNRRMKYKKE 247
>gi|426355742|ref|XP_004045267.1| PREDICTED: homeobox protein Hox-A6 [Gorilla gorilla gorilla]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|385654459|gb|AFI61963.1| Hox-A4a [Anguilla japonica]
Length = 241
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 123 ETLNATNFVPKDEAISEMVDGKPPGF---NMDRNG----------NPVG----LRADSNG 165
E A F +DEA + D PG+ N NG PV +R SN
Sbjct: 37 EPPKAPGFAHQDEAPFQRSDYPEPGYEYNNAHSNGLEDFPGHIHTQPVPQNHDIRMISNA 96
Query: 166 VGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKT--GGGNKRSRQTYSRY 221
CS+S++ + +YPWMK H + C GG KRSR Y+R
Sbjct: 97 DEGTVAPKDCSLSNETLPPAQKTKEPVVYPWMKKVHVYTV-CPNYNGGPPKRSRTAYTRQ 155
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 156 QALELEKEFHFNRYLTRRRRVEIAHAMCLSERQVKIWFQNRRMKWKKDHKLPN 208
>gi|324516674|gb|ADY46601.1| Homeobox protein mab-5 [Ascaris suum]
Length = 200
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 6/80 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWMK S GG KR+RQTYSR QTLELEKEFHYNKYL+RKRR EI+ LQL
Sbjct: 107 VFPWMK------MSGGKGGEAKRTRQTYSRNQTLELEKEFHYNKYLTRKRRQEISESLQL 160
Query: 251 TERQIKIWFQNRRMKLKKEV 270
+ERQ+KIWFQNRRMK KKE
Sbjct: 161 SERQVKIWFQNRRMKHKKET 180
>gi|297715929|ref|XP_002834296.1| PREDICTED: homeobox protein Hox-B4 [Pongo abelii]
Length = 251
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|354479686|ref|XP_003502040.1| PREDICTED: homeobox protein Hox-A5-like [Cricetulus griseus]
Length = 169
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 52 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 110
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 111 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 152
>gi|327263838|ref|XP_003216724.1| PREDICTED: homeobox protein Hox-C6-like [Anolis carolinensis]
Length = 236
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
E + +YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRI
Sbjct: 114 QEQKTSIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRI 172
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
EIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 173 EIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|444517710|gb|ELV11728.1| Homeobox protein Hox-B5 [Tupaia chinensis]
Length = 230
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 137 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 195 SERQIKIWFQNRRMKWKKD 213
>gi|74267509|dbj|BAE44253.1| hoxA5a [Oryzias latipes]
gi|83016929|dbj|BAE53461.1| hoxA5a [Oryzias latipes]
Length = 279
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ +HD S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 185 IYPWMRKLHISHDIS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 239
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 240 LCLSERQIKIWFQNRRMKWKKD 261
>gi|325260876|gb|ADZ04666.1| homeobox C4 [Notophthalmus viridescens]
Length = 271
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 178 SSQQDHEGEDGA---TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYN 233
+S QDH + +YPWMK H ++ + G KRSR Y+R Q LELEKEFHYN
Sbjct: 127 ASIQDHSNGTASKQPIVYPWMKKIHVSTVNPNYNGSEPKRSRTAYTRQQVLELEKEFHYN 186
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 187 RYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 227
>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
Length = 592
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKEL 457
>gi|426228408|ref|XP_004008301.1| PREDICTED: homeobox protein Hox-A4 [Ovis aries]
Length = 218
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 91 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 150
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 151 CLSERQVKIWFQNRRMKWKKDHKLPN 176
>gi|13489077|ref|NP_076919.1| homeobox protein Hox-A6 [Homo sapiens]
gi|332864943|ref|XP_003318413.1| PREDICTED: homeobox protein Hox-A6 [Pan troglodytes]
gi|397472865|ref|XP_003807954.1| PREDICTED: homeobox protein Hox-A6 [Pan paniscus]
gi|17378385|sp|P31267.2|HXA6_HUMAN RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1B
gi|47479571|gb|AAH69497.1| Homeobox A6 [Homo sapiens]
gi|51094978|gb|EAL24222.1| homeo box A6 [Homo sapiens]
gi|85397002|gb|AAI04916.1| Homeobox A6 [Homo sapiens]
gi|85397005|gb|AAI04918.1| Homeobox A6 [Homo sapiens]
gi|119614281|gb|EAW93875.1| homeobox A6, isoform CRA_b [Homo sapiens]
gi|306921739|dbj|BAJ17949.1| homeobox A6 [synthetic construct]
gi|312152714|gb|ADQ32869.1| homeobox A6 [synthetic construct]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|432871367|ref|XP_004071930.1| PREDICTED: homeobox protein Hox-B6a-like [Oryzias latipes]
gi|74267541|dbj|BAE44269.1| hoxB6a [Oryzias latipes]
gi|83016949|dbj|BAE53476.1| hoxB6a [Oryzias latipes]
Length = 274
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMQRMNACNGT--FGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 228
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 229 TERQIKIWFQNRRMKWKKE 247
>gi|432866257|ref|XP_004070762.1| PREDICTED: homeobox protein Hox-C5a-like [Oryzias latipes]
gi|74267561|dbj|BAE44279.1| hoxC5a [Oryzias latipes]
gi|83016964|dbj|BAE53487.1| hoxC5a [Oryzias latipes]
Length = 228
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 149 NMDRNGNPVGLR---ADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSC 205
N DR G + +D N + V+ + S++ Q E E +YPWM H + S
Sbjct: 105 NPDRTAKSSGSKNQESDRNADNTQSVKRNTSLN--QLQESEQRPQIYPWMTKLHMSHES- 161
Query: 206 KTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMK 265
KRSR +Y+RYQTLELEKEFH+N+YLSR+RRIEIAH L L ERQIKIWFQNRRMK
Sbjct: 162 ----EGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMK 217
Query: 266 LKKE 269
KK+
Sbjct: 218 WKKD 221
>gi|296209381|ref|XP_002751499.1| PREDICTED: homeobox protein Hox-A6 [Callithrix jacchus]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|64742|emb|CAA31020.1| unnamed protein product [Xenopus laevis]
Length = 152
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 40 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 98
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N+SST
Sbjct: 99 TERQIKIWFQNRRMKWKKE---SNLSST 123
>gi|385654493|gb|AFI61992.1| Hox-B4b [Anguilla japonica]
Length = 246
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Query: 190 TLYPWMKSNH----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+YPWMK H + +YS GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIA
Sbjct: 128 VVYPWMKKVHVNIVNPNYS---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIA 184
Query: 246 HELQLTERQIKIWFQNRRMKLKKEVLRPN 274
H L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 185 HTLCLSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|359320350|ref|XP_003639319.1| PREDICTED: homeobox protein Hox-B4 [Canis lupus familiaris]
Length = 280
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|12848710|dbj|BAB28059.1| unnamed protein product [Mus musculus]
Length = 230
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ +HD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 137 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 191
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKD 213
>gi|344285931|ref|XP_003414713.1| PREDICTED: homeobox protein Hox-B4-like [Loxodonta africana]
Length = 251
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 132 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 191
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
>gi|344285929|ref|XP_003414712.1| PREDICTED: homeobox protein Hox-B5-like [Loxodonta africana]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|332692500|gb|AEE90179.1| Homeobox B4b [Anguilla anguilla]
Length = 246
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Query: 190 TLYPWMKSNH----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
+YPWMK H + +YS GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIA
Sbjct: 128 VVYPWMKKVHVNIVNPNYS---GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIA 184
Query: 246 HELQLTERQIKIWFQNRRMKLKKEVLRPN 274
H L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 185 HTLCLSERQIKIWFQNRRMKWKKDHKLPN 213
>gi|112983614|ref|NP_001037341.1| transcription factor deformed [Bombyx mori]
gi|4589703|dbj|BAA76869.1| Dfd [Bombyx mori]
Length = 392
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 190 TLYPWMKSNHDASYS---CKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+RRIEIAH
Sbjct: 165 VIYPWMKKIHVAGASNGSFQPGMEPKRQRTGYTRHQILELEKEFHYNRYLTRRRRIEIAH 224
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 225 TLVLSERQIKIWFQNRRMKWKKDNKLPN 252
>gi|296202585|ref|XP_002748519.1| PREDICTED: homeobox protein Hox-B5 [Callithrix jacchus]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|332692499|gb|AEE90178.1| Homeobox B5b [Anguilla anguilla]
gi|385654492|gb|AFI61991.1| Hox-B5b [Anguilla japonica]
Length = 275
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ NHD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 182 IFPWMRKLHINHDM-----TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 236
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 237 LCLSERQIKIWFQNRRMKWKKD 258
>gi|410899430|ref|XP_003963200.1| PREDICTED: homeobox protein Hox-C4a-like [Takifugu rubripes]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 138 VVYPWMKKIHVSTVNSAYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHAL 197
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 198 VLSERQIKIWFQNRRMKWKKDHRLPN 223
>gi|395826616|ref|XP_003786513.1| PREDICTED: homeobox protein Hox-B5 [Otolemur garnettii]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|332259417|ref|XP_003278786.1| PREDICTED: homeobox protein Hox-B5-like [Nomascus leucogenys]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|109114181|ref|XP_001088160.1| PREDICTED: homeobox protein Hox-B5 [Macaca mulatta]
gi|311267500|ref|XP_003131598.1| PREDICTED: homeobox protein Hox-B5-like [Sus scrofa]
gi|345805494|ref|XP_003435305.1| PREDICTED: homeobox protein Hox-B5 [Canis lupus familiaris]
gi|402899489|ref|XP_003912728.1| PREDICTED: homeobox protein Hox-B5 [Papio anubis]
gi|426237817|ref|XP_004012854.1| PREDICTED: homeobox protein Hox-B5 [Ovis aries]
gi|84579185|dbj|BAE73026.1| hypothetical protein [Macaca fascicularis]
gi|355753956|gb|EHH57921.1| hypothetical protein EGM_07666 [Macaca fascicularis]
gi|440910524|gb|ELR60318.1| Homeobox protein Hox-B5 [Bos grunniens mutus]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|297680782|ref|XP_002818147.1| PREDICTED: homeobox protein Hox-A6 [Pongo abelii]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGTV-YGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
Length = 590
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKEL 457
>gi|195038659|ref|XP_001990774.1| GH18074 [Drosophila grimshawi]
gi|193894970|gb|EDV93836.1| GH18074 [Drosophila grimshawi]
Length = 529
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 309 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 368
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 369 HALCLTERQIKIWFQNRRMKLKKEL 393
>gi|213510894|ref|NP_001135139.1| homeobox protein HoxC6ba [Salmo salar]
gi|157815980|gb|ABV82009.1| homeobox protein HoxC6ba [Salmo salar]
gi|158702348|gb|ABW77537.1| homeobox protein HoxC6ba [Salmo salar]
Length = 232
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 6/97 (6%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IFPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE N++ST L E + A
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST--LTESVSA 212
>gi|403287993|ref|XP_003935202.1| PREDICTED: homeobox protein Hox-A6 [Saimiri boliviensis
boliviensis]
gi|170649679|gb|ACB21264.1| homeobox A6 (predicted) [Callicebus moloch]
Length = 233
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQYKPDSSSGQGKALHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|4504469|ref|NP_002138.1| homeobox protein Hox-B5 [Homo sapiens]
gi|114666352|ref|XP_001173004.1| PREDICTED: homeobox protein Hox-B5 [Pan troglodytes]
gi|297715933|ref|XP_002834298.1| PREDICTED: homeobox protein Hox-B5 [Pongo abelii]
gi|397514564|ref|XP_003827551.1| PREDICTED: homeobox protein Hox-B5 [Pan paniscus]
gi|403279481|ref|XP_003931278.1| PREDICTED: homeobox protein Hox-B5 [Saimiri boliviensis
boliviensis]
gi|400000|sp|P09067.3|HXB5_HUMAN RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein HHO.C10; AltName: Full=Homeobox protein Hox-2A;
AltName: Full=Homeobox protein Hu-1
gi|11138933|gb|AAG31553.1|AF287967_3 homeobox B5 [Homo sapiens]
gi|184293|gb|AAA52682.1| homeobox protein [Homo sapiens]
gi|109659004|gb|AAI17248.1| Homeobox B5 [Homo sapiens]
gi|119615143|gb|EAW94737.1| homeobox B5 [Homo sapiens]
gi|189054616|dbj|BAG37466.1| unnamed protein product [Homo sapiens]
gi|208968499|dbj|BAG74088.1| homeobox B5 [synthetic construct]
gi|410212186|gb|JAA03312.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|410980977|ref|XP_003996850.1| PREDICTED: homeobox protein Hox-B4 [Felis catus]
Length = 188
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 69 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 128
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 129 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 162
>gi|354474766|ref|XP_003499601.1| PREDICTED: homeobox protein Hox-B5-like [Cricetulus griseus]
gi|344249142|gb|EGW05246.1| Homeobox protein Hox-B5 [Cricetulus griseus]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|284005063|ref|NP_001164871.1| homeobox protein Hox-A4 [Oryctolagus cuniculus]
gi|217418307|gb|ACK44309.1| homeobox A4 (predicted) [Oryctolagus cuniculus]
Length = 319
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 194 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHAL 253
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 254 CLSERQVKIWFQNRRMKWKKDHKLPN 279
>gi|522335|gb|AAA37842.1| homeobox protein [Mus musculus]
Length = 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|154183818|gb|ABS70759.1| Hoxc6a [Haplochromis burtoni]
Length = 234
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ ++ G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 121 IYPWMQ-RMNSHGGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE N++ST E+ A
Sbjct: 180 TERQIKIWFQNRRMKWKKE---SNLTSTVTGTEQTGA 213
>gi|6808023|emb|CAB70742.1| hypothetical protein [Homo sapiens]
Length = 246
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 127 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 186
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 187 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 220
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 352 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 410
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
TERQIKIWFQNRRMK KKE N++ST +E+
Sbjct: 411 TERQIKIWFQNRRMKWKKES---NLTSTVTGNEQ 441
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 185 GRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKE 244
>gi|160358780|ref|NP_032294.2| homeobox protein Hox-B5 [Mus musculus]
gi|300794055|ref|NP_001178854.1| homeo box B5 [Rattus norvegicus]
gi|114152820|sp|P09079.3|HXB5_MOUSE RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein H24.1; AltName: Full=Homeobox protein Hox-2.1;
AltName: Full=Homeobox protein Mu-1
gi|73695287|gb|AAI03608.1| Homeo box B5 [Mus musculus]
gi|73695374|gb|AAI03597.1| Homeo box B5 [Mus musculus]
gi|73695450|gb|AAI03596.1| Homeo box B5 [Mus musculus]
gi|73695452|gb|AAI03605.1| Homeo box B5 [Mus musculus]
gi|74225740|dbj|BAE21695.1| unnamed protein product [Mus musculus]
gi|148684080|gb|EDL16027.1| homeobox B5 [Mus musculus]
gi|149053984|gb|EDM05801.1| similar to homeotic protein Hox B5 - mouse (predicted) [Rattus
norvegicus]
Length = 269
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|255742434|gb|ACU32549.1| homeobox protein HoxA6 [Callorhinchus milii]
Length = 229
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + +S S G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 132 IYPWMQRMNSSSSSV-FGPHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCL 190
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 191 TERQIKIWFQNRRMKWKKE 209
>gi|440910525|gb|ELR60319.1| Homeobox protein Hox-B4 [Bos grunniens mutus]
Length = 188
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 69 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 128
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 129 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 162
>gi|426347612|ref|XP_004041443.1| PREDICTED: homeobox protein Hox-B5 [Gorilla gorilla gorilla]
Length = 269
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
Length = 590
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKEL 457
>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
Length = 588
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 371 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 430
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 431 HALCLTERQIKIWFQNRRMKLKKEL 455
>gi|59939333|gb|AAX12425.1| Dbuz\abd-A-PB [Drosophila buzzatii]
Length = 536
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 316 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 375
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 376 HALCLTERQIKIWFQNRRMKLKKEL 400
>gi|355568481|gb|EHH24762.1| hypothetical protein EGK_08477 [Macaca mulatta]
Length = 269
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ +HD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHISHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|322366542|gb|ADW95345.1| Hox7 [Paracentrotus lividus]
Length = 321
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
YPWM A + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L LT
Sbjct: 186 YPWMPV---AGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLT 242
Query: 252 ERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KKE
Sbjct: 243 ERQIKIWFQNRRMKYKKE 260
>gi|321475843|gb|EFX86805.1| putative homeotic Fushi-tarazu protein [Daphnia pulex]
Length = 428
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 55/59 (93%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
KR+RQTY+RYQTLELEKEFH+N+YL+R+RR+EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 284 KRTRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKAKKET 342
>gi|119370792|sp|Q1KKU6.1|HXC4A_FUGRU RecName: Full=Homeobox protein Hox-C4a
gi|94482832|gb|ABF22448.1| homeobox protein HoxC4a [Takifugu rubripes]
Length = 264
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 133 VVYPWMKKIHVSTVNSAYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHAL 192
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 193 VLSERQIKIWFQNRRMKWKKDHRLPN 218
>gi|3581946|emb|CAA64696.1| homeodomain protein [Girardia tigrina]
Length = 259
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 187 DGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+ LY WM N +S NKR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH
Sbjct: 151 NNVMLYSWM--NPKSSGDNTNNTNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAH 208
Query: 247 ELQLTERQIKIWFQNRRMKLKKE 269
L LTERQIKIWFQNRRMK KKE
Sbjct: 209 TLILTERQIKIWFQNRRMKWKKE 231
>gi|220898217|gb|ACL81470.1| HoxD8 [Latimeria menadoensis]
Length = 234
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%), Gaps = 14/149 (9%)
Query: 143 GKPPGF----NMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSN 198
G+P F N+ R + R +++ V PD + S + + E + ++PWM+S
Sbjct: 79 GEPSKFYGYDNLQRQLSFTTQR-EADLVEYPDCKSSNGYIVE-EQETSSPSQMFPWMRS- 135
Query: 199 HDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 258
+ G +R RQTYSR+QTLELEKEF +N YL+RKRRIE++H L LTERQIKIW
Sbjct: 136 -------QAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHSLGLTERQIKIW 188
Query: 259 FQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
FQNRRMK KKE + S++ E+ E
Sbjct: 189 FQNRRMKWKKENNKDTFSTSRQEREECEV 217
>gi|149723918|ref|XP_001502124.1| PREDICTED: homeobox protein Hox-B5-like [Equus caballus]
Length = 269
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ +HD TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHFSHD-----MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKD 252
>gi|213510804|ref|NP_001133014.1| homeobox protein HoxC4ba [Salmo salar]
gi|157815984|gb|ABV82011.1| homeobox protein HoxC4ba [Salmo salar]
gi|158702350|gb|ABW77539.1| homeobox protein HoxC4ba [Salmo salar]
Length = 274
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + G + KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 134 VVYPWMKKIHVSTANPNYNGADAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 193
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 VLSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|4322076|gb|AAD15947.1| homeobox protein [Danio rerio]
Length = 244
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 191 LYPWMKSNHDASYSCKT--GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ + SC G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L
Sbjct: 129 VYPWMQRMN----SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHAL 184
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 185 CLTERQIKIWFQNRRMKWKKE 205
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+++ KR RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 115 MYPWMRASDPT---------RKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 165
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 166 SERQIKIWFQNRRMKWKKD 184
>gi|317419675|emb|CBN81712.1| Homeobox protein Hox-B5b [Dicentrarchus labrax]
Length = 287
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 251
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 252 SERQIKIWFQNRRMKWKKD 270
>gi|432881691|ref|XP_004073904.1| PREDICTED: homeobox protein Hox-A5-like [Oryzias latipes]
Length = 302
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+YPWM+ +HD S G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 208 IYPWMRKLHISHDIS-----GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 262
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 263 LCLSERQIKIWFQNRRMKWKKD 284
>gi|431890741|gb|ELK01620.1| Homeobox protein Hox-B4 [Pteropus alecto]
Length = 207
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 88 SHSSCKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 147
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 148 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 181
>gi|426238972|ref|XP_004013410.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4 [Ovis
aries]
Length = 285
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 91 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 150
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 151 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 184
>gi|354474768|ref|XP_003499602.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4-like
[Cricetulus griseus]
Length = 192
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 73 SHSACKEPVVYPWMRKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 132
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 133 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 166
>gi|195394383|ref|XP_002055823.1| abd-A [Drosophila virilis]
gi|194142532|gb|EDW58935.1| abd-A [Drosophila virilis]
Length = 522
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 299 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 358
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 359 HALCLTERQIKIWFQNRRMKLKKEL 383
>gi|190339031|gb|AAI63163.1| Hoxc6b protein [Danio rerio]
Length = 228
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 9/100 (9%)
Query: 178 SSQQDHEGEDGAT--------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
S QD+ + G T +YPWM+ + S G +R RQ YSRYQTLELEKE
Sbjct: 96 SLTQDYASDQGKTMEPKGSVQIYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKE 154
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
FHYN+YL+R+RRIEIA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 155 FHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 194
>gi|121308920|dbj|BAF43725.1| transcription factor Hox7 [Metacrinus rotundus]
Length = 256
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 7/80 (8%)
Query: 192 YPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
YPWM + TG G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L
Sbjct: 144 YPWMNVT-----AAPTGVEMGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLG 198
Query: 250 LTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 199 LTERQIKIWFQNRRMKYKKE 218
>gi|34484445|gb|AAQ72845.1| Hoxb5b [Sphoeroides nephelus]
Length = 280
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 187 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 244
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 245 SERQIKIWFQNRRMKWKKD 263
>gi|426432569|gb|ADO33070.2| ultrabithorax [Biston betularia]
Length = 254
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 146 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 198
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 199 LTERQIKIWFQNRRMKLKKEI 219
>gi|426355746|ref|XP_004045269.1| PREDICTED: homeobox protein Hox-A4 [Gorilla gorilla gorilla]
Length = 187
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 60 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 119
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 120 CLSERQVKIWFQNRRMKWKKDHKLPN 145
>gi|311275742|ref|XP_003134887.1| PREDICTED: homeobox protein Hox-A6-like [Sus scrofa]
Length = 233
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 8/109 (7%)
Query: 168 SPDVQ---DSCSVSSQQDH-EGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSR 220
SP+ Q DS S + H EG D + +YPWM+ + + G +R RQTY+R
Sbjct: 106 SPEQQFKPDSSSGPGKGLHDEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTR 164
Query: 221 YQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213
>gi|184185535|gb|ACC68936.1| homeobox A6 (predicted) [Rhinolophus ferrumequinum]
Length = 233
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 136 VYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 194
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
TERQIKIWFQNRRMK KKE I+ST E+ EA
Sbjct: 195 TERQIKIWFQNRRMKWKKE--NKLINSTQPSGEEAEA 229
>gi|351704295|gb|EHB07214.1| Homeobox protein Hox-A5 [Heterocephalus glaber]
Length = 215
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 121 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 179
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 180 SERQIKIWFQNRRMKWKKD 198
>gi|348517907|ref|XP_003446474.1| PREDICTED: homeobox protein Hox-B7-like [Oreochromis niloticus]
Length = 233
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 68/90 (75%), Gaps = 13/90 (14%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMKS +G +R RQTY+R+Q+LELEKEFH+N+YL+RKR+IE+AH L L
Sbjct: 145 IYPWMKS---------SGSDRRRGRQTYTRHQSLELEKEFHFNRYLTRKRQIEVAHALGL 195
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTM 280
TERQIKIWFQNRRMK KKE NI +T +
Sbjct: 196 TERQIKIWFQNRRMKWKKE----NIVTTAV 221
>gi|158702311|gb|ABW77507.1| homeobox protein HoxB5bb [Salmo salar]
Length = 279
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ NH+ + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 186 IFPWMRKLHINHEMA-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHT 240
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L LTERQIKIWFQNRRMK KK+
Sbjct: 241 LCLTERQIKIWFQNRRMKWKKD 262
>gi|254212178|gb|ACT65753.1| Hoxa4 [Leucoraja erinacea]
Length = 245
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H + + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 126 VYPWMKKIHVTNVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 185
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 186 LSERQVKIWFQNRRMKWKKDHKLPN 210
>gi|195107232|ref|XP_001998219.1| GI23753 [Drosophila mojavensis]
gi|193914813|gb|EDW13680.1| GI23753 [Drosophila mojavensis]
Length = 529
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 309 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 368
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 369 HALCLTERQIKIWFQNRRMKLKKEL 393
>gi|291389286|ref|XP_002711077.1| PREDICTED: homeobox C9-like [Oryctolagus cuniculus]
Length = 463
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 326 TSIAQDFSPEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 384
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 385 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 427
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 182 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 241
>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
Length = 596
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 375 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 434
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 435 HALCLTERQIKIWFQNRRMKLKKEL 459
>gi|410895281|ref|XP_003961128.1| PREDICTED: homeobox protein Hox-B5b-like [Takifugu rubripes]
gi|119370786|sp|Q1KKX0.1|HXB5B_FUGRU RecName: Full=Homeobox protein Hox-B5b
gi|94482807|gb|ABF22424.1| homeobox protein HoxB5b [Takifugu rubripes]
Length = 280
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 187 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 244
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 245 SERQIKIWFQNRRMKWKKD 263
>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
Length = 560
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 347 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 406
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 407 HALCLTERQIKIWFQNRRMKLKKEL 431
>gi|126308245|ref|XP_001367145.1| PREDICTED: homeobox protein Hox-B5 [Monodelphis domestica]
Length = 267
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 174 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 231
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 232 SERQIKIWFQNRRMKWKKD 250
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E + +YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 115 EQKSTVQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIE 173
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 174 IANALCLTERQIKIWFQNRRMKWKKE 199
>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
Length = 562
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 349 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 408
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 409 HALCLTERQIKIWFQNRRMKLKKEL 433
>gi|47551093|ref|NP_999725.1| homeobox protein HB1 [Strongylocentrotus purpuratus]
gi|2506527|sp|P13545.2|HMB1_STRPU RecName: Full=Homeobox protein HB1; AltName: Full=SPHBOX1
gi|1339973|dbj|BAA12813.1| homeobox [Strongylocentrotus purpuratus]
Length = 308
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 192 YPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM S + G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE++H L L
Sbjct: 174 YPWMPVSGPNVGLEV----GRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGL 229
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 230 TERQIKIWFQNRRMKYKKE 248
>gi|256014529|gb|ACU56819.1| HOXB7 [Pantherophis spiloides]
Length = 129
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 82/141 (58%), Gaps = 26/141 (18%)
Query: 138 SEMVDGKPPG------------FNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHE- 184
S VD +PPG FNM + L G S + +C+ S Q+D +
Sbjct: 1 SNYVDPQPPGMYSSGYGLDTSSFNMHCSPFEQNLSMMCPGDAS---KPNCNKSDQRDTDL 57
Query: 185 -GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E +YPWM+S TG KR RQTY+RYQTLEL KEFHYN+YL+R+RRIE
Sbjct: 58 RHESNLRIYPWMRS---------TGTDRKRGRQTYTRYQTLELGKEFHYNRYLTRRRRIE 108
Query: 244 IAHELQLTERQIKIWFQNRRM 264
IAH L LTERQIKIWFQNRRM
Sbjct: 109 IAHALCLTERQIKIWFQNRRM 129
>gi|290563452|ref|NP_001166809.1| abdominal A isoform 3 [Bombyx mori]
gi|164682500|gb|ABY66347.1| homeobox protein [Bombyx mori]
Length = 343
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 192 YPWMKSN-----HDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
YPWM D G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH
Sbjct: 194 YPWMSITDWMNPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 253
Query: 247 ELQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 254 ALCLTERQIKIWFQNRRMKLKKEL 277
>gi|309253977|gb|ADO60877.1| antennapedia [Bicyclus anynana]
Length = 150
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPW++S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 75 SPLYPWIRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 124
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 125 CLTERQIKIWFQNRRMKWKKE 145
>gi|281344381|gb|EFB19965.1| hypothetical protein PANDA_005012 [Ailuropoda melanoleuca]
Length = 256
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 163 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 220
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 221 SERQIKIWFQNRRMKWKKD 239
>gi|119615129|gb|EAW94723.1| homeobox B8, isoform CRA_a [Homo sapiens]
gi|431890745|gb|ELK01624.1| Homeobox protein Hox-B8 [Pteropus alecto]
Length = 242
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 220
>gi|359754098|gb|AEV59520.1| HOXB5 [Macropus eugenii]
Length = 267
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 174 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 231
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 232 SERQIKIWFQNRRMKWKKD 250
>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
Length = 631
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 414 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 473
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 474 HALCLTERQIKIWFQNRRMKLKKEL 498
>gi|158702291|gb|ABW77488.1| homeobox protein HoxB5ba [Salmo salar]
Length = 279
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 19/114 (16%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKS---NHDASYSCKTGGGNKRSR 215
L+ +SN S + + C ++PWM+ NH+ + G KR+R
Sbjct: 165 LQQESNNATSTTISNDCQTPQ-----------IFPWMRKLHINHEMA-----GPDGKRAR 208
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 209 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKD 262
>gi|345323597|ref|XP_001510583.2| PREDICTED: homeobox protein Hox-A6-like [Ornithorhynchus anatinus]
Length = 232
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
Query: 168 SPDVQ---DSCSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
SP+ Q DS S + EG D + +YPWM+ + + + G +R RQTY+RY
Sbjct: 106 SPEQQYKSDSSVQSKILNDEGTDRKYTSPVYPWMQRMNSCAGTV-YGTHGRRGRQTYTRY 164
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 165 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 212
>gi|154183820|gb|ABS70761.1| Hoxc4a [Haplochromis burtoni]
Length = 265
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 133 VVYPWMKKIHVSTVNSGYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 192
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 193 VLSERQIKIWFQNRRMKWKKDHRLPN 218
>gi|54261740|ref|NP_571176.2| homeobox protein Hox-B5a [Danio rerio]
gi|60392406|sp|P09014.2|HXB5A_DANRE RecName: Full=Homeobox protein Hox-B5a; Short=Hox-B5; AltName:
Full=Homeobox protein Zf-21
gi|26984637|emb|CAD59114.1| SI:dZ254O17.4 (homeo box protein B5a) [Danio rerio]
gi|47938028|gb|AAH71493.1| Homeo box B5a [Danio rerio]
Length = 275
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 182 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 239
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 240 SERQIKIWFQNRRMKWKKD 258
>gi|158702280|gb|ABW77478.1| homeobox protien HoxB5ab [Salmo salar]
Length = 276
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 183 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 240
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 241 SERQIKIWFQNRRMKWKKD 259
>gi|126343889|ref|XP_001364878.1| PREDICTED: homeobox protein Hox-C6 [Monodelphis domestica]
gi|395540853|ref|XP_003772365.1| PREDICTED: homeobox protein Hox-C6 [Sarcophilus harrisii]
gi|359754108|gb|AEV59529.1| HOXC6 [Macropus eugenii]
Length = 235
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 181 TERQIKIWFQNRRMKWKKE 199
>gi|440899270|gb|ELR50599.1| Homeobox protein Hox-A4, partial [Bos grunniens mutus]
Length = 170
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 43 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 102
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 103 CLSERQVKIWFQNRRMKWKKDHKLPN 128
>gi|410980867|ref|XP_003996795.1| PREDICTED: homeobox protein Hox-B5 [Felis catus]
Length = 269
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 233
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 234 SERQIKIWFQNRRMKWKKD 252
>gi|395532649|ref|XP_003768382.1| PREDICTED: homeobox protein Hox-B5 [Sarcophilus harrisii]
Length = 267
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 174 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 231
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 232 SERQIKIWFQNRRMKWKKD 250
>gi|220898180|gb|ACL81436.1| HoxA4 [Latimeria menadoensis]
Length = 237
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Query: 185 GEDGA--TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
G++G +YPWMK H + + GG KRSR Y+R Q LELEKEFH+N+YL+R+RR
Sbjct: 111 GQNGKEPIVYPWMKKIHVCTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 170
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
IEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 171 IEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 203
>gi|432925214|ref|XP_004080700.1| PREDICTED: homeobox protein Hox-B5b-like [Oryzias latipes]
gi|74267553|dbj|BAE44275.1| hoxB5b [Oryzias latipes]
gi|83016957|dbj|BAE53482.1| hoxB5b [Oryzias latipes]
Length = 281
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 188 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 245
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 246 SERQIKIWFQNRRMKWKKD 264
>gi|3420830|gb|AAC31942.1| Ultrabithorax homeotic protein IIa [Anopheles gambiae]
Length = 327
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 10/95 (10%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+++ ++ E G L W+ +N G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 211 AIAGKRYSESLAGTLLPDWIGAN----------GLRRRGRQTYTRYQTLELEKEFHTNHY 260
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 261 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 295
>gi|332692523|gb|AEE90199.1| Homeobox C6b [Anguilla anguilla]
gi|385654516|gb|AFI62012.1| Hox-C6b [Anguilla japonica]
Length = 233
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 191 LYPWMK--SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWM+ ++H Y G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L
Sbjct: 122 IYPWMQRMNSHRIGY----GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANAL 177
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 178 CLTERQIKIWFQNRRMKWKKE 198
>gi|158702338|gb|ABW77528.1| homeobox protein HoxC4ab [Salmo salar]
Length = 269
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + G +KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VVYPWMKKIHVSTANPNYNGPDSKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 194
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 VLSERQIKIWFQNRRMKWKKDHRLPN 220
>gi|24647523|ref|NP_732172.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|23171494|gb|AAN13718.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|33636523|gb|AAQ23559.1| RE43738p [Drosophila melanogaster]
gi|220945946|gb|ACL85516.1| Ubx-PE [synthetic construct]
gi|220955710|gb|ACL90398.1| Ubx-PE [synthetic construct]
Length = 380
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 273 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 322
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 323 LCLTERQIKIWFQNRRMKLKKEI 345
>gi|47229432|emb|CAF99420.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H + +G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 142 IYPWMRKIHISHE--LSGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 199
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 200 SERQIKIWFQNRRMKWKKD 218
>gi|27544943|ref|NP_034584.1| homeobox protein Hox-A6 [Mus musculus]
gi|20141492|sp|P09092.2|HXA6_MOUSE RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1.2; AltName: Full=Homeobox protein M5-4
gi|9716486|gb|AAF97512.1|AF247663_1 homeodomain protein Hoxa 6 [Mus musculus]
gi|111599973|gb|AAI19106.1| Homeo box A6 [Mus musculus]
gi|111601101|gb|AAI19108.1| Homeo box A6 [Mus musculus]
gi|148666243|gb|EDK98659.1| homeobox A6 [Mus musculus]
Length = 232
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 5/98 (5%)
Query: 176 SVSSQQDHE-GED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFH 231
SV + HE G D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH
Sbjct: 116 SVQGKALHEEGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFH 174
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 175 FNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 212
>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
Length = 582
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 360 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 419
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 420 HALCLTERQIKIWFQNRRMKLKKEL 444
>gi|194900579|ref|XP_001979833.1| GG16812 [Drosophila erecta]
gi|190651536|gb|EDV48791.1| GG16812 [Drosophila erecta]
Length = 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 274 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 323
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 324 LCLTERQIKIWFQNRRMKLKKEI 346
>gi|110282969|sp|Q9YGT6.2|HXA5A_DANRE RecName: Full=Homeobox protein Hox-A5a
Length = 265
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMRKLH-ISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 229
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 230 SERQIKIWFQNRRMKWKKD 248
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRIE+
Sbjct: 431 GASPSPMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEV 482
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
+H L LTERQ+KIWFQNRRMK KKE
Sbjct: 483 SHGLGLTERQVKIWFQNRRMKWKKE 507
>gi|71981493|ref|NP_001021164.1| Protein LIN-39 [Caenorhabditis elegans]
gi|462537|sp|P34684.1|LIN39_CAEEL RecName: Full=Homeobox protein lin-39; AltName: Full=Abnormal cell
lineage protein 39
gi|304328|gb|AAB04137.1| homeobox protein [Caenorhabditis elegans]
gi|304332|gb|AAC37168.1| homeobox protein [Caenorhabditis elegans]
gi|351021329|emb|CCD63594.1| Protein LIN-39 [Caenorhabditis elegans]
Length = 253
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
D + G +YPWM H TGG G KR R Y+R Q LELEKEFH +KYL+RK
Sbjct: 139 DMDKNSGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRK 193
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RRIE+AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 194 RRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223
>gi|158702268|gb|ABW77467.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 183 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 240
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 241 SERQIKIWFQNRRMKWKKD 259
>gi|405109810|emb|CCH51007.1| ultrabithorax, partial [Phalangium opilio]
Length = 219
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
YPWM + + G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L L
Sbjct: 93 FYPWMA----IAGLFRANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 148
Query: 251 TERQIKIWFQNRRMKLKKEV 270
TERQIKIWFQNRRMKLKKE+
Sbjct: 149 TERQIKIWFQNRRMKLKKEI 168
>gi|348521582|ref|XP_003448305.1| PREDICTED: homeobox protein Hox-C4a [Oreochromis niloticus]
Length = 270
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 138 VVYPWMKKIHVSTVNSGYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 197
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 198 VLSERQIKIWFQNRRMKWKKDHRLPN 223
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + +GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 187 VVYPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 246
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 247 CLSERQVKIWFQNRRMKWKKDHKLPN 272
>gi|301762932|ref|XP_002916868.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ailuropoda melanoleuca]
Length = 268
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 175 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 232
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 233 SERQIKIWFQNRRMKWKKD 251
>gi|62537|emb|CAA48320.1| homeodomain protein [Danio rerio]
gi|62555|emb|CAA31290.1| ZF-21 gene product [Danio rerio]
Length = 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 182 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 239
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 240 SERQIKIWFQNRRMKWKKD 258
>gi|969090|gb|AAA84408.1| UBXIA [Drosophila melanogaster]
Length = 380
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 273 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 322
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 323 LCLTERQIKIWFQNRRMKLKKEI 345
>gi|24119205|ref|NP_571615.1| homeobox protein Hox-A5a [Danio rerio]
gi|4322062|gb|AAD15940.1| homeobox protein [Danio rerio]
gi|190337204|gb|AAI62990.1| Homeo box A5a [Danio rerio]
gi|190338205|gb|AAI62975.1| Homeo box A5a [Danio rerio]
Length = 227
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 133 IYPWMRKLH-ISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 191
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 192 SERQIKIWFQNRRMKWKKD 210
>gi|195500193|ref|XP_002097268.1| GE26131 [Drosophila yakuba]
gi|194183369|gb|EDW96980.1| GE26131 [Drosophila yakuba]
Length = 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 274 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 323
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 324 LCLTERQIKIWFQNRRMKLKKEI 346
>gi|74267543|dbj|BAE44270.1| hoxB8a [Oryzias latipes]
gi|83016950|dbj|BAE53477.1| hoxB8a [Oryzias latipes]
Length = 274
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 137 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALAL 188
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 189 TERQVKIWFQNRRMKWKKE 207
>gi|17985969|ref|NP_536752.1| ultrabithorax, isoform A [Drosophila melanogaster]
gi|48428932|sp|P83949.1|UBX_DROME RecName: Full=Homeotic protein ultrabithorax
gi|48428933|sp|P83950.1|UBX_DROSI RecName: Full=Homeotic protein ultrabithorax
gi|433477|emb|CAA53803.1| homeotic ultrabithorax protein [Drosophila melanogaster]
gi|829190|emb|CAA29194.1| Ultrabithorax gene product [Drosophila melanogaster]
gi|4323521|gb|AAD16402.1| Ultrabithorax [Drosophila simulans]
gi|10726569|gb|AAF55355.2| ultrabithorax, isoform A [Drosophila melanogaster]
Length = 389
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 282 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 331
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 332 LCLTERQIKIWFQNRRMKLKKEI 354
>gi|213512000|ref|NP_001135145.1| homeobox protein HoxB5aa [Salmo salar]
gi|157816089|gb|ABV82063.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 183 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 240
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 241 SERQIKIWFQNRRMKWKKD 259
>gi|123204408|gb|ABM73547.1| homeodomain protein [Megalobrama amblycephala]
Length = 214
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR R Y+R+QTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 125 IYPWMRKLH-ISHGNLAGPEGKRPRTAYTRFQTLELEKEFHFNRYLTRRRRIEIAHTLCL 183
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 184 SERQIKIWFQNRRMKWKKD 202
>gi|348522365|ref|XP_003448695.1| PREDICTED: homeobox protein Hox-B5b-like [Oreochromis niloticus]
Length = 293
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 257
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 258 SERQIKIWFQNRRMKWKKD 276
>gi|281344380|gb|EFB19964.1| hypothetical protein PANDA_005010 [Ailuropoda melanoleuca]
Length = 166
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 60 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 119
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 120 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 153
>gi|390178471|ref|XP_003736654.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859456|gb|EIM52727.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 10/95 (10%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+++ ++ E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N Y
Sbjct: 248 AIAGKRYSESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHY 297
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
L+R+RRIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 298 LTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEI 332
>gi|969086|gb|AAA84412.1| UBXIB [Drosophila melanogaster]
Length = 389
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 282 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 331
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 332 LCLTERQIKIWFQNRRMKLKKEI 354
>gi|28629677|gb|AAO43044.1| HoxD8 [Latimeria menadoensis]
Length = 223
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 72/107 (67%), Gaps = 8/107 (7%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
++ E + ++PWM+S + G +R RQTYSR+QTLELEKEF +N YL+RKR
Sbjct: 108 EEQETSSPSQMFPWMRS--------QAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKR 159
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIE++H L LTERQIKIWFQNRRMK KKE + S++ E+ E
Sbjct: 160 RIEVSHSLGLTERQIKIWFQNRRMKWKKENNKDTFSTSRQEREECEV 206
>gi|158702222|gb|ABW77442.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Query: 187 DGAT--LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
DGA + PWM+ NHD+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 180 DGAQPHISPWMRKLHINHDS----LTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRR 235
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 236 IEIAHALCLSERQIKIWFQNRRMKWKKD 263
>gi|154183819|gb|ABS70760.1| Hoxc5a [Haplochromis burtoni]
Length = 227
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 81/127 (63%), Gaps = 8/127 (6%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G+ P + GN + +D N + V+ + +V+ +D E +YPWM H +
Sbjct: 102 GRDPERSAKSGGN-MSQESDRNADNTQSVKRNTNVNQPED--SEQRPQIYPWMTKLHMSH 158
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
S KRSR +Y+RYQTLELEKEFH+N+YLSR+RRIEIAH L L ERQIKIWFQNR
Sbjct: 159 ES-----EGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNR 213
Query: 263 RMKLKKE 269
RMK KK+
Sbjct: 214 RMKWKKD 220
>gi|449277035|gb|EMC85342.1| Homeobox protein Hox-B8 [Columba livia]
Length = 241
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 184 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 219
>gi|2708301|gb|AAB92411.1| sex combs reduced [Acanthokara kaputensis]
Length = 120
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 22 IYPWMRRAHVGQ--SLNGMEAKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 79
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 80 TERQIKIWFQNRRMKWKKE 98
>gi|348517815|ref|XP_003446428.1| PREDICTED: homeobox protein Hox-B8a-like [Oreochromis niloticus]
Length = 280
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 16/105 (15%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
G+GS D + + + L+PWM+ + G +R RQTYSRYQTL
Sbjct: 119 GLGSEDAEGT--------EQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTL 162
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 ELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|154183844|gb|ABS70783.1| Hoxb5b [Haplochromis burtoni]
Length = 293
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 200 IFPWMRKLHISHD--MTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 257
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 258 SERQIKIWFQNRRMKWKKD 276
>gi|355695025|gb|AER99869.1| homeobox B7 [Mustela putorius furo]
Length = 188
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 67/101 (66%), Gaps = 11/101 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNR 188
>gi|154183796|gb|ABS70739.1| Hoxb8a [Haplochromis burtoni]
Length = 280
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 16/105 (15%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
G+GS D + + + L+PWM+ + G +R RQTYSRYQTL
Sbjct: 119 GLGSEDAEGT--------EQSPSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTL 162
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 163 ELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 207
>gi|45382501|ref|NP_990242.1| homeobox B8 [Gallus gallus]
gi|4099016|gb|AAD09228.1| Hoxb-8 [Gallus gallus]
Length = 241
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 184 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 219
>gi|969087|gb|AAA84411.1| UBXIIB [Drosophila melanogaster]
Length = 372
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 265 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 314
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 315 LCLTERQIKIWFQNRRMKLKKEI 337
>gi|24647525|ref|NP_732173.1| ultrabithorax, isoform C [Drosophila melanogaster]
gi|23171495|gb|AAN13719.1| ultrabithorax, isoform C [Drosophila melanogaster]
Length = 372
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 265 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 314
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 315 LCLTERQIKIWFQNRRMKLKKEI 337
>gi|224045300|ref|XP_002194850.1| PREDICTED: homeobox protein Hox-A4 [Taeniopygia guttata]
Length = 306
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 175 CSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFH 231
C + + G G +YPWMK H ++ + GG KRSR Y+R Q LELEKEFH
Sbjct: 168 CPLLPDKSLPGLKGKEPVVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFH 227
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 228 FNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 270
>gi|62125375|gb|AAX63757.1| HoxB5bi [Oncorhynchus mykiss]
Length = 256
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 8/82 (9%)
Query: 191 LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
++PWM+ NH+ + G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 176 IFPWMRKLHINHEMA-----GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHT 230
Query: 248 LQLTERQIKIWFQNRRMKLKKE 269
L LTERQIKIWFQNRRMK KK+
Sbjct: 231 LCLTERQIKIWFQNRRMKWKKD 252
>gi|16508129|gb|AAL17914.1| homeobox protein hox4x [Petromyzon marinus]
Length = 381
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 9/116 (7%)
Query: 163 SNGV-GSPDVQDSCSVSSQQDHEGEDGA-TLYPWMKSNH--DASYSCKTGGGNKRSRQTY 218
+ GV G P Q + V+ GE G+ +YPWMK H + SC+ G +R Y
Sbjct: 247 ATGVPGQPQQQPAAGVA-----RGEGGSMVVYPWMKKVHVNTVAPSCRGNGELNGARTAY 301
Query: 219 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+R+Q LELEKEFH+N+YL+R+RR+E+A+ L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 302 TRHQALELEKEFHFNRYLTRRRRVEVANALCLSERQIKIWFQNRRMKWKKDHRLPN 357
>gi|403288103|ref|XP_003935254.1| PREDICTED: homeobox protein Hox-A4, partial [Saimiri boliviensis
boliviensis]
Length = 163
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 34 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 93
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 94 CLSERQVKIWFQNRRMKWKKDHKLPN 119
>gi|350405524|ref|XP_003487462.1| PREDICTED: hypothetical protein LOC100747520 [Bombus impatiens]
Length = 422
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 15/100 (15%)
Query: 204 SCKTGGGN----KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWF 259
SC G GN KR+RQTY+R+QTLELEKEFHYN+YL+R+RRIEI+ L LTERQIKIWF
Sbjct: 250 SCAQGDGNNVGQKRTRQTYTRFQTLELEKEFHYNRYLTRRRRIEISKALSLTERQIKIWF 309
Query: 260 QNRRMKLKKE--VLRPNISSTTMLDEKLEAPPVFMPAYSA 297
QNRRMK KK+ + +P + EA V PAYSA
Sbjct: 310 QNRRMKAKKDGKLAQPALQ---------EANRVGPPAYSA 340
>gi|355753955|gb|EHH57920.1| hypothetical protein EGM_07665, partial [Macaca fascicularis]
Length = 127
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 27 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 86
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 87 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 120
>gi|220898196|gb|ACL81451.1| HoxB8 [Latimeria menadoensis]
Length = 240
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEELE 221
>gi|1334649|emb|CAA30122.1| unnamed protein product [Xenopus laevis]
Length = 114
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 2 IYPWMQRMNSHS-GVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 60
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N+SST
Sbjct: 61 TERQIKIWFQNRRMKWKKE---SNLSST 85
>gi|397472982|ref|XP_003808006.1| PREDICTED: homeobox protein Hox-A4 [Pan paniscus]
Length = 175
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 48 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 107
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 108 CLSERQVKIWFQNRRMKWKKDHKLPN 133
>gi|380028373|ref|XP_003697878.1| PREDICTED: uncharacterized protein LOC100865753 [Apis florea]
Length = 577
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 192 YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLT 251
Y W+KS++ S TG KR+RQTY+R+QTLELEKEFHYN+YL+R RR+EIA L LT
Sbjct: 429 YSWLKSSNSKGESSNTG--QKRTRQTYTRHQTLELEKEFHYNRYLTRHRRLEIAKALSLT 486
Query: 252 ERQIKIWFQNRRMKLKK 268
ERQ+KIWFQNRRMK KK
Sbjct: 487 ERQVKIWFQNRRMKAKK 503
>gi|88604712|gb|ABD46727.1| homeobox protein deformed [Endeis spinosa]
Length = 325
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Query: 157 VGLRADSNGVGSPDVQDSCSVSSQ----QDHEGEDGA--TLYPWMKSNHDASYSCKTGGG 210
+G + GV +P D + S Q Q+ +G+ +YPWM+ H ++ + G
Sbjct: 156 LGNHLGTGGVAAPPSSDGSTNSKQDAGMQECNSSNGSHPVIYPWMRKVHVSNPASCGGVE 215
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
KR R Y++ Q+LELEKEFH+N+Y++R+RRIEIAH L L ERQIKIWFQNRRM+ KK+
Sbjct: 216 PKRHRTNYNKIQSLELEKEFHFNRYVTRRRRIEIAHALCLPERQIKIWFQNRRMRYKKDN 275
Query: 271 LRPN 274
+PN
Sbjct: 276 NQPN 279
>gi|449491432|ref|XP_002187352.2| PREDICTED: homeobox protein Hox-B8 [Taeniopygia guttata]
Length = 241
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 184 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 219
>gi|224041|prf||1008211B fushi tarazu gene
Length = 435
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 6/105 (5%)
Query: 168 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
SP + S +VS + DH +GA + W + CK +KR+RQTY+RYQTL
Sbjct: 236 SPGEKSSSAVSQEIDHRIVTAPNGAGDFNWSHIEETLASRCK---DSKRTRQTYTRYQTL 292
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 293 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD 337
>gi|308474472|ref|XP_003099457.1| CRE-LIN-39 protein [Caenorhabditis remanei]
gi|308266646|gb|EFP10599.1| CRE-LIN-39 protein [Caenorhabditis remanei]
Length = 256
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query: 187 DGATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G +YPWM H TGG G KR R Y+R Q LELEKEFH +KYL+RKRRIE+
Sbjct: 147 SGGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEV 201
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQ+KIWFQNRRMK KKE
Sbjct: 202 AHSLMLTERQVKIWFQNRRMKHKKE 226
>gi|405976604|gb|EKC41105.1| Homeobox protein Hox-B7 [Crassostrea gigas]
Length = 208
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM S + + + KR+RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 97 VFPWMGSTINGA---EVTYEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHLLGL 153
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 154 TERQIKIWFQNRRMKWKKD 172
>gi|291500845|gb|ADE08353.1| homeobox C6 [Monodelphis domestica]
Length = 208
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 95 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 153
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 154 TERQIKIWFQNRRMKWKKE 172
>gi|213512948|ref|NP_001133051.1| homeobox protein HoxB8ab [Salmo salar]
gi|157816103|gb|ABV82070.1| homeobox protein HoxB8ab [Salmo salar]
gi|158702277|gb|ABW77475.1| homeobox protien HoxB8ab [Salmo salar]
Length = 246
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQLAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E++E
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKTEQEEIE 221
>gi|195451417|ref|XP_002072909.1| GK13855 [Drosophila willistoni]
gi|194168994|gb|EDW83895.1| GK13855 [Drosophila willistoni]
Length = 384
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 272 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 321
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 322 MAHALCLTERQIKIWFQNRRMKLKKEI 348
>gi|213513558|ref|NP_001135092.1| homeobox protein HoxC4ab [Salmo salar]
gi|157815964|gb|ABV82001.1| homeobox protein HoxC4ab [Salmo salar]
Length = 269
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + G +KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VVYPWMKKIHVSTANPNYNGPDSKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 194
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 VLSERQIKIWFQNRRMKWKKDHRLPN 220
>gi|306879|gb|AAA36007.1| homeo box c8 protein [Homo sapiens]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 74
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 75 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|224045304|ref|XP_002194920.1| PREDICTED: homeobox protein Hox-A6 [Taeniopygia guttata]
Length = 231
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 134 VYPWMQRMNSCAGTV-YGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 192
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 193 TERQIKIWFQNRRMKWKKE 211
>gi|301128884|emb|CBL59347.1| HoxB8 [Scyliorhinus canicula]
Length = 234
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 11/104 (10%)
Query: 169 PDVQDSCSVSSQQDHEGEDGAT---LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
PD + + + ++ E ++ L+PWM+ + G +R RQTYSRYQTLE
Sbjct: 110 PDCKSTANSLGEEAENSEQSSSPTQLFPWMRP--------QVAAGRRRGRQTYSRYQTLE 161
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 162 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 205
>gi|429510510|gb|AFZ94993.1| transcription factor Hox8 [Petromyzon marinus]
Length = 274
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 174 SCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 233
S ++ H A ++PWM+ G G +R RQTYSR+QTLELEKEF +N
Sbjct: 146 SVGEETEASHLSYTAAQMFPWMRPQ---------GPGRRRGRQTYSRFQTLELEKEFLFN 196
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 197 PYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 232
>gi|449268333|gb|EMC79202.1| Homeobox protein Hox-A6 [Columba livia]
Length = 231
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 134 VYPWMQRMNSCAGTV-YGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 192
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 193 TERQIKIWFQNRRMKWKKE 211
>gi|347972377|ref|XP_003436886.1| AGAP004662-PB [Anopheles gambiae str. PEST]
gi|333467596|gb|EGK96614.1| AGAP004662-PB [Anopheles gambiae str. PEST]
Length = 370
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 23/128 (17%)
Query: 164 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS--------------------- 202
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 134 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 191
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 192 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 251
Query: 263 RMKLKKEV 270
RMKLKKE+
Sbjct: 252 RMKLKKEL 259
>gi|57164349|ref|NP_001009335.1| homeobox protein Hox-C6 [Ovis aries]
gi|338726316|ref|XP_003365299.1| PREDICTED: homeobox protein Hox-C6-like isoform 2 [Equus caballus]
gi|410964587|ref|XP_003988835.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Felis catus]
gi|1708358|sp|P49925.1|HXC6_SHEEP RecName: Full=Homeobox protein Hox-C6
gi|988252|gb|AAA75473.1| Hox C6 [Ovis aries]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 74
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 75 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|21362265|ref|NP_034591.1| homeobox protein Hox-B8 [Mus musculus]
gi|300793662|ref|NP_001178578.1| homeobox protein Hox-B8 [Rattus norvegicus]
gi|123259|sp|P09632.2|HXB8_MOUSE RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4
gi|51392|emb|CAA32000.1| unnamed protein product [Mus musculus]
gi|51397|emb|CAA38014.1| homeobox-2.4 intracisternal A-particle protein [Mus musculus]
gi|295919|emb|CAA32141.1| Hox-2.4 protein [Mus musculus]
gi|148684076|gb|EDL16023.1| homeobox B8 [Mus musculus]
gi|149053980|gb|EDM05797.1| homeo box B8 (mapped) [Rattus norvegicus]
gi|223460336|gb|AAI39213.1| Hoxb8 protein [Mus musculus]
gi|223461094|gb|AAI39210.1| Homeo box B8 [Mus musculus]
Length = 243
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 8/79 (10%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 186 TERQVKIWFQNRRMKWKKE 204
>gi|301128888|emb|CBL59351.1| HoxB4 [Scyliorhinus canicula]
Length = 241
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 168 SPDVQDSCSVS-SQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLE 225
+P SCS + S Q+ +YPWMK H + GG KRSR Y+R Q LE
Sbjct: 100 TPSPPPSCSQNFSNQNTPCSKEPVVYPWMKKLHINVVNPNYKGGEPKRSRTAYTRQQVLE 159
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LEKEFH+N+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 160 LEKEFHFNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 208
>gi|187956227|gb|AAI50665.1| Homeo box C4 [Mus musculus]
gi|219841914|gb|AAI44779.1| Hoxc4 protein [Mus musculus]
Length = 264
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK + ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIYVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|332692489|gb|AEE90169.1| Homeobox B5a [Anguilla anguilla]
gi|385654480|gb|AFI61981.1| Hox-B5a [Anguilla japonica]
Length = 279
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 186 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 243
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 244 SERQIKIWFQNRRMKWKKD 262
>gi|146324918|sp|A1YGK7.1|HXA7_PANPA RecName: Full=Homeobox protein Hox-A7
gi|121484170|gb|ABM54432.1| HOXA7 [Pan paniscus]
Length = 230
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 75/127 (59%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE H L LTERQI WFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEXXHALCLTERQIXXWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>gi|327275812|ref|XP_003222666.1| PREDICTED: homeobox protein Hox-B5a-like isoform 2 [Anolis
carolinensis]
Length = 287
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 194 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 251
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 252 SERQIKIWFQNRRMKWKKD 270
>gi|24497544|ref|NP_710160.1| homeobox protein Hox-C6 isoform 2 [Homo sapiens]
gi|426372804|ref|XP_004053306.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Gorilla gorilla
gorilla]
gi|51412|emb|CAA31023.1| unnamed protein product [Mus musculus]
gi|26341506|dbj|BAC34415.1| unnamed protein product [Mus musculus]
gi|119617152|gb|EAW96746.1| homeobox C6, isoform CRA_a [Homo sapiens]
gi|189054716|dbj|BAG37349.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 74
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 75 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|51474|emb|CAA34517.1| unnamed protein product [Mus musculus]
Length = 153
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 11/103 (10%)
Query: 177 VSSQQDHEGEDGAT----------LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLEL 226
S QD E G T +YPWM+ + S G +R RQ YSRYQTLEL
Sbjct: 16 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLEL 74
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 75 EKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|429510516|gb|AFZ94996.1| Hox4-like protein 2 [Petromyzon marinus]
Length = 371
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + TG +KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 152 VVYPWMKKVHVNTLNPNYTGAESKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSL 211
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 212 CLSERQIKIWFQNRRMKWKKDHKLPN 237
>gi|332692486|gb|AEE90166.1| Homeobox B8a [Anguilla anguilla]
gi|385654477|gb|AFI61978.1| Hox-B8a [Anguilla japonica]
Length = 248
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 136 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 187
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E +E
Sbjct: 188 TERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEAIE 223
>gi|34398401|gb|AAQ67269.1| ultrabithorax [Drosophila virilis]
Length = 387
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 275 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 324
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 325 MAHALCLTERQIKIWFQNRRMKLKKEI 351
>gi|255742436|gb|ACU32551.1| homeobox protein HoxA4 [Callorhinchus milii]
Length = 247
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Query: 166 VGSPDV-QDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQT 223
V +P + + + + Q +YPWMK H + + GG KRSR Y+R Q
Sbjct: 102 VATPALCSQNAKIPTTQKGTPSKEPIVYPWMKKIHVTTVNPNYIGGEPKRSRTAYTRQQV 161
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 162 LELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 212
>gi|157278493|ref|NP_001098348.1| homeobox protein Hox-C4 [Oryzias latipes]
gi|21263751|sp|Q9PVS4.1|HXC4_ORYLA RecName: Full=Homeobox protein Hox-C4
gi|6274504|dbj|BAA86238.1| HOXC4A [Oryzias latipes]
Length = 261
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 132 VVYPWMKKIHVSTVNSGYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 191
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 VLSERQIKIWFQNRRMKWKKDHRLPN 217
>gi|119370774|sp|Q1KL14.1|HXA5A_FUGRU RecName: Full=Homeobox protein Hox-A5a
gi|94482760|gb|ABF22380.1| homeobox protein HoxA5a [Takifugu rubripes]
Length = 274
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H + +G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 180 IYPWMRKIHISHE--LSGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 237
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 238 SERQIKIWFQNRRMKWKKD 256
>gi|195446503|ref|XP_002070808.1| GK10825 [Drosophila willistoni]
gi|194166893|gb|EDW81794.1| GK10825 [Drosophila willistoni]
Length = 430
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 67/92 (72%), Gaps = 14/92 (15%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+RQTY+RYQTLELEKEFH+N+Y++R+RRI+IAH L LTERQIKIWFQNRRMK KK
Sbjct: 273 SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIAHALSLTERQIKIWFQNRRMKSKK-- 330
Query: 271 LRPNISSTTMLDEKLEAPPVFMP-AYSAALPK 301
D LEA P P AY+ +P+
Sbjct: 331 -----------DRTLEASPEHCPAAYNLTVPQ 351
>gi|355695019|gb|AER99867.1| homeobox B4 [Mustela putorius furo]
Length = 214
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 182 DHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
H +YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+R
Sbjct: 33 SHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 92
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 93 RVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 126
>gi|213515508|ref|NP_001133039.1| homeobox protein HoxA7ab [Salmo salar]
gi|157816061|gb|ABV82049.1| homeobox protein HoxA7ab [Salmo salar]
Length = 252
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+++ KR RQTYSRYQTLELEKEFH+N+YL+R+RR+EIAH L L
Sbjct: 115 MYPWMRTSDP---------NRKRGRQTYSRYQTLELEKEFHFNRYLNRRRRVEIAHVLCL 165
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 166 TERQIKIWFQNRRMKWKKD 184
>gi|1708344|sp|P50208.1|HXA5_AMBME RecName: Full=Homeobox protein Hox-A5
gi|746418|gb|AAA91634.1| homeobox protein, partial [Ambystoma mexicanum]
Length = 148
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 54 IYPWMRKLH-ISHDNIGGPRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 112
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 113 SERQIKIWFQNRRMKWKKD 131
>gi|17136422|ref|NP_476693.1| abdominal A, isoform A [Drosophila melanogaster]
gi|281361946|ref|NP_001163632.1| abdominal A, isoform C [Drosophila melanogaster]
gi|386765930|ref|NP_001247145.1| abdominal A, isoform D [Drosophila melanogaster]
gi|7523|emb|CAA38321.1| homeobox protein [Drosophila melanogaster]
gi|969084|gb|AAA84406.1| ABD-AI [Drosophila melanogaster]
gi|7300194|gb|AAF55359.1| abdominal A, isoform A [Drosophila melanogaster]
gi|54650674|gb|AAV36916.1| RE04174p [Drosophila melanogaster]
gi|220953476|gb|ACL89281.1| abd-A-PA [synthetic construct]
gi|272477023|gb|ACZ94928.1| abdominal A, isoform C [Drosophila melanogaster]
gi|383292756|gb|AFH06463.1| abdominal A, isoform D [Drosophila melanogaster]
Length = 330
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 113 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 172
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 173 HALCLTERQIKIWFQNRRMKLKKEL 197
>gi|195038397|ref|XP_001990646.1| GH19471 [Drosophila grimshawi]
gi|193894842|gb|EDV93708.1| GH19471 [Drosophila grimshawi]
Length = 382
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 270 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 319
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 320 MAHALCLTERQIKIWFQNRRMKLKKEI 346
>gi|47971144|dbj|BAD22529.1| LjHox6w Homeobox [Lethenteron camtschaticum]
Length = 85
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ ++ G +R RQTYSRYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 3 IYPWMQ-RMNSHNGLGLGTDRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 61
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 62 TERQIKIWFQNRRMKWKKE 80
>gi|327275814|ref|XP_003222667.1| PREDICTED: homeobox protein Hox-B5a-like isoform 3 [Anolis
carolinensis]
Length = 277
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 184 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 241
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 242 SERQIKIWFQNRRMKWKKD 260
>gi|2911356|gb|AAC04332.1| homeobox protein HoxQ8 [Petromyzon marinus]
Length = 272
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 174 SCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYN 233
S ++ H A ++PWM+ G G +R RQTYSR+QTLELEKEF +N
Sbjct: 146 SVGEETEASHLSYTAAQMFPWMRPQ---------GPGRRRGRQTYSRFQTLELEKEFLFN 196
Query: 234 KYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 197 PYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 232
>gi|59939334|gb|AAX12426.1| Dbuz\abd-A-PA [Drosophila buzzatii]
Length = 331
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 111 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 170
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 171 HALCLTERQIKIWFQNRRMKLKKEL 195
>gi|229577325|ref|NP_571256.1| homeobox protein Hox-B8b [Danio rerio]
gi|60392414|sp|Q8JH55.1|HXB8B_DANRE RecName: Full=Homeobox protein Hox-B8b; AltName: Full=Homeobox
protein Hox-A8
gi|22316134|emb|CAD44456.1| homeo box protein B8b [Danio rerio]
gi|190337844|gb|AAI62153.1| Homeo box B8b [Danio rerio]
gi|190338644|gb|AAI62167.1| Homeo box B8b [Danio rerio]
Length = 247
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 60/81 (74%), Gaps = 9/81 (11%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
A L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L
Sbjct: 132 AQLFPWMRPQ---------ATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHAL 182
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQ+KIWFQNRRMK KKE
Sbjct: 183 ALTERQVKIWFQNRRMKWKKE 203
>gi|332692496|gb|AEE90175.1| Homeobox B8b [Anguilla anguilla]
gi|385654489|gb|AFI61988.1| Hox-B8b [Anguilla japonica]
Length = 248
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 135 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 186
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E +E
Sbjct: 187 TERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEAIE 222
>gi|395540396|ref|XP_003772141.1| PREDICTED: homeobox protein Hox-A6 [Sarcophilus harrisii]
Length = 234
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 135 VYPWMQRMNSCAGTV-YGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 193
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 194 TERQIKIWFQNRRMKWKKE 212
>gi|359754087|gb|AEV59510.1| HOXA6 [Macropus eugenii]
Length = 234
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 135 VYPWMQRMNSCAGTV-YGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 193
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 194 TERQIKIWFQNRRMKWKKE 212
>gi|327275810|ref|XP_003222665.1| PREDICTED: homeobox protein Hox-B5a-like isoform 1 [Anolis
carolinensis]
Length = 278
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H + TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 185 IFPWMRKLHISH--DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 242
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 243 SERQIKIWFQNRRMKWKKD 261
>gi|195389682|ref|XP_002053505.1| ultrabithorax [Drosophila virilis]
gi|194151591|gb|EDW67025.1| ultrabithorax [Drosophila virilis]
Length = 378
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 266 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 315
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 316 MAHALCLTERQIKIWFQNRRMKLKKEI 342
>gi|301754117|ref|XP_002912920.1| PREDICTED: homeobox protein Hox-A4-like [Ailuropoda melanoleuca]
Length = 164
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 37 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 96
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 97 CLSERQVKIWFQNRRMKWKKDHKLPN 122
>gi|222530736|emb|CAU83356.1| deformed [Parasteatoda tepidariorum]
Length = 289
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 182 DHEGEDGATLYPWMK---SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
D G D +YPWM+ +N+ G KR R Y+R+Q LELEKEFH+N+YL+R
Sbjct: 124 DCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFNRYLTR 183
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 184 RRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNKLPN 219
>gi|391341154|ref|XP_003744896.1| PREDICTED: uncharacterized protein LOC100900312 [Metaseiulus
occidentalis]
Length = 360
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 27/138 (19%)
Query: 164 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS--------------------Y 203
+GV SP+ + + S + + +YPWMK H +
Sbjct: 98 SGVTSPETSPTPPIQSNRGTPDSEHPVIYPWMKKAHSGQAQENRAVDDWSGDPYPEQMRF 157
Query: 204 SCKT---GGGN----KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIK 256
C GN KR R Y+R+Q LELEKEFH+N+YL+R+RRIEIAH L LTERQIK
Sbjct: 158 PCAGNEHAFGNIMEPKRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLTERQIK 217
Query: 257 IWFQNRRMKLKKEVLRPN 274
IWFQNRRMK KK+ PN
Sbjct: 218 IWFQNRRMKWKKDNKLPN 235
>gi|444713454|gb|ELW54353.1| Homeobox protein Hox-A3 [Tupaia chinensis]
Length = 620
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK K
Sbjct: 15 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 74
Query: 268 KEVLRPNISSTTMLD-EKLEA----PPVFMPAYSAALPKA-----NYDWNGSQIGE 313
K+ PN T M D EK + PPVF S ++P N N +Q+GE
Sbjct: 75 KDHKLPN---TKMRDLEKFLSLTCFPPVFSLPLSPSIPAVLVLEPNRHQNKTQLGE 127
>gi|109944947|dbj|BAE97003.1| Antennapedia [Porcellio scaber]
Length = 258
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 10/79 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
+ LYPWM+S + KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH
Sbjct: 190 SSPLYPWMRSQFE----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 239
Query: 248 LQLTERQIKIWFQNRRMKL 266
L LTERQIKIWFQNRRMK
Sbjct: 240 LCLTERQIKIWFQNRRMKC 258
>gi|426238968|ref|XP_004013408.1| PREDICTED: homeobox protein Hox-B8 [Ovis aries]
Length = 142
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ A G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 33 LFPWMRPQAAA--------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 84
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 85 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 120
>gi|194742544|ref|XP_001953761.1| GF17924 [Drosophila ananassae]
gi|190626798|gb|EDV42322.1| GF17924 [Drosophila ananassae]
Length = 391
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 188 GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH
Sbjct: 283 GSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 332
Query: 248 LQLTERQIKIWFQNRRMKLKKEV 270
L LTERQIKIWFQNRRMKLKKE+
Sbjct: 333 LCLTERQIKIWFQNRRMKLKKEI 355
>gi|334349109|ref|XP_001365645.2| PREDICTED: homeobox protein Hox-A6-like [Monodelphis domestica]
Length = 232
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 135 VYPWMQRMNSCAGTV-YGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 193
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 194 TERQIKIWFQNRRMKWKKE 212
>gi|209489449|gb|ACI49209.1| hypothetical protein Csp3_JD04.008 [Caenorhabditis angaria]
Length = 191
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWMK S GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L L
Sbjct: 97 VFPWMKMGG----SGTKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISESLHL 152
Query: 251 TERQIKIWFQNRRMKLKKEV 270
TERQ+KIWFQNRRMK KKE
Sbjct: 153 TERQVKIWFQNRRMKHKKEA 172
>gi|354474845|ref|XP_003499640.1| PREDICTED: hypothetical protein LOC100761150 [Cricetulus griseus]
Length = 364
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 255 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 305
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 306 TERQVKIWFQNRRMKWKKE 324
>gi|291461548|dbj|BAI83408.1| deformed [Parasteatoda tepidariorum]
Length = 291
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 182 DHEGEDGATLYPWMK---SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSR 238
D G D +YPWM+ +N+ G KR R Y+R+Q LELEKEFH+N+YL+R
Sbjct: 126 DCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFNRYLTR 185
Query: 239 KRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 186 RRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNKLPN 221
>gi|213513916|ref|NP_001135094.1| homeobox protein HoxC6bb [Salmo salar]
gi|157815997|gb|ABV82017.1| homeobox protein HoxC6bb [Salmo salar]
gi|158702358|gb|ABW77546.1| homeobox protein HoxC6bb [Salmo salar]
Length = 232
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
+ERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 SERQIKIWFQNRRMKWKKE---SNLTST 205
>gi|198453089|ref|XP_001359066.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|218512108|sp|P20822.3|UBX_DROPS RecName: Full=Homeotic protein ultrabithorax
gi|198132207|gb|EAL28209.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 385
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 273 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 322
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 323 MAHALCLTERQIKIWFQNRRMKLKKEI 349
>gi|195146376|ref|XP_002014162.1| GL23004 [Drosophila persimilis]
gi|194103105|gb|EDW25148.1| GL23004 [Drosophila persimilis]
Length = 387
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 275 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 324
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 325 MAHALCLTERQIKIWFQNRRMKLKKEI 351
>gi|47228654|emb|CAG07386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASY-SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ S G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 350 VVYPWMKKIHVSTVNSAYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHAL 409
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 410 VLSERQIKIWFQNRRMKWKKDHRLPN 435
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM H S KRSR +Y+RYQTLELEKEFH+N+YLSR+RRIEIA
Sbjct: 43 EQQPQIYPWMTKLHMNHES-----DGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIA 97
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L L ERQIKIWFQNRRMK KK+
Sbjct: 98 HNLCLNERQIKIWFQNRRMKWKKD 121
>gi|387862366|gb|AFK08969.1| ultrabithorax variant b, partial [Bicyclus anynana]
Length = 138
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 48 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 100
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 101 LTERQIKIWFQNRRMKLKKEI 121
>gi|429510504|gb|AFZ94990.1| transcription factor Hox5 [Petromyzon marinus]
Length = 325
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Query: 191 LYPWMKS---NHDASYSCKT------------GGGNKRSRQTYSRYQTLELEKEFHYNKY 235
+YPWM+ NH +T G KRSR Y+RYQTLELEKEFH+N+Y
Sbjct: 215 IYPWMRKLHLNHGNGARARTAPRATPRARGERGPEGKRSRTAYTRYQTLELEKEFHFNRY 274
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
L+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 275 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 308
>gi|255661319|gb|ACU25815.1| homeobox protein C4b [Anguilla japonica]
Length = 204
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 8/100 (8%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNK 234
+VSS+Q +YPWM+ H ++ + G KRSR Y+R Q LELEKEFHYN+
Sbjct: 111 TVSSKQP-------VVYPWMRKIHVSTVNPSYNGAEPKRSRTAYTRQQVLELEKEFHYNR 163
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 164 YLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPN 203
>gi|195498911|ref|XP_002096728.1| GE24884 [Drosophila yakuba]
gi|194182829|gb|EDW96440.1| GE24884 [Drosophila yakuba]
Length = 421
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 21/146 (14%)
Query: 168 SPDVQDSCSVSSQQDHE---GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTL 224
SP + S +V + +H +GA + W + CK +KR+RQTY+RYQTL
Sbjct: 218 SPGEKSSPAVGQEINHRIVTAPNGAGDFNWSHIEETLASDCK---DSKRTRQTYTRYQTL 274
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE--------------- 269
ELEKEFH+N+Y++R+RRI+IA+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 275 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLEGSPEHCGAGYT 334
Query: 270 VLRPNISSTTMLDEKLEAPPVFMPAY 295
L P + +TT + PV +P Y
Sbjct: 335 ALLPPLEATTTASTGTPSVPVPVPMY 360
>gi|42734369|ref|NP_571195.1| homeobox protein Hox-B8a [Danio rerio]
gi|60392412|sp|Q8AWZ0.1|HXB8A_DANRE RecName: Full=Homeobox protein Hox-B8a; Short=Hox-B8
gi|26984634|emb|CAD59111.1| SI:dZ254O17.1 (homeo box protein B8a) [Danio rerio]
gi|31419284|gb|AAH53287.1| Homeo box B8a [Danio rerio]
Length = 245
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E++E
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEQIE 220
>gi|355694997|gb|AER99859.1| homeobox A4 [Mustela putorius furo]
Length = 141
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 15 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 74
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 75 CLSERQVKIWFQNRRMKWKKDHKLPN 100
>gi|195110393|ref|XP_001999766.1| GI24708 [Drosophila mojavensis]
gi|193916360|gb|EDW15227.1| GI24708 [Drosophila mojavensis]
Length = 379
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E G+ L W+ +N G +R RQTY+RYQTLELEKEFH N YL+R+RRIE
Sbjct: 267 ESLAGSLLPDWLGTN----------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 316
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEV 270
+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 317 MAHALCLTERQIKIWFQNRRMKLKKEI 343
>gi|46395474|ref|NP_997060.1| homeobox protein Hox-D8 [Gallus gallus]
gi|123283|sp|P23459.1|HXD8_CHICK RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-M; Short=Chox-M
gi|62701|emb|CAA40445.1| CHOX M product [Gallus gallus]
Length = 188
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 11/111 (9%)
Query: 162 DSNGVGSPDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTY 218
++ V PD + S + + + DH + A ++PWM+ + G +R RQTY
Sbjct: 51 EAELVQYPDCKSSSANIGEEPDHLNQSSSPAQMFPWMRP--------QAAPGRRRGRQTY 102
Query: 219 SRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
SR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 103 SRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 153
>gi|220898182|gb|ACL81438.1| HoxA6 [Latimeria menadoensis]
Length = 230
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 133 IFPWMQRMNSCT-GTEYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCL 191
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 192 TERQIKIWFQNRRMKWKKE 210
>gi|2708303|gb|AAB92412.1| ultrabithorax [Acanthokara kaputensis]
Length = 214
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
Query: 181 QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
Q + + YPWM + + G KR RQTY+RYQTLELEKEFH N YL+R+R
Sbjct: 111 QVNPSSETTPFYPWM------NVAGANGLQRKRGRQTYTRYQTLELEKEFHTNHYLTRRR 164
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
RIE+AH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 165 RIEMAHALCLTERQIKIWFQNRRMKLKKEM 194
>gi|158702265|gb|ABW77464.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------SAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E++E
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKTEQEEIE 220
>gi|213511094|ref|NP_001135140.1| homeobox protein HoxC4bb [Salmo salar]
gi|157816001|gb|ABV82019.1| homeobox protein HoxC4bb [Salmo salar]
gi|158702360|gb|ABW77548.1| homeobox protein HoxC4bb [Salmo salar]
Length = 276
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + + G + KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 134 VVYPWMKKIHVSIANPNYNGADAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTL 193
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 VLSERQIKIWFQNRRMKWKKDHRLPN 219
>gi|403183386|gb|EAT33900.2| AAEL013832-PA [Aedes aegypti]
Length = 418
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 194 WMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
WM + D ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L
Sbjct: 179 WMSNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALC 238
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 239 LTERQIKIWFQNRRMKLKKEL 259
>gi|255742464|gb|ACU32577.1| homeobox protein HoxC6 [Callorhinchus milii]
Length = 219
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRVNSHS-GVGYGPDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 181 TERQIKIWFQNRRMKWKKE 199
>gi|213514276|ref|NP_001135380.1| homeobox protein HoxB4aa [Salmo salar]
gi|157816091|gb|ABV82064.1| homeobox protein HoxB4aa [Salmo salar]
gi|158702269|gb|ABW77468.1| homeobox protein HoxB4aa [Salmo salar]
gi|223649156|gb|ACN11336.1| Homeobox protein Hox-B4a [Salmo salar]
Length = 250
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 14/108 (12%)
Query: 172 QDSCSVSSQQDHEGEDGATLYPWMKSNH----DASYSCKTGGGN-KRSRQTYSRYQTLEL 226
Q + SS++D +YPWMK H + +Y TG G KRSR Y+R Q LEL
Sbjct: 117 QSPSTASSRKD------PVVYPWMKKVHVNIVNPNY---TGVGEPKRSRTAYTRQQVLEL 167
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
EKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 168 EKEFHYNRYLTRRRRVEIAHTLVLSERQIKIWFQNRRMKWKKDHKLPN 215
>gi|332692541|gb|AEE90215.1| Homeobox D4b [Anguilla anguilla]
Length = 231
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 179 SQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
SQ + A +Y WMK H A+ + TG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 108 SQIGISAKQPAVVYAWMKKVHVATVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLT 167
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L ++ERQIKIWFQNRRMK KK+ PN
Sbjct: 168 RRRRIEIAHTLCVSERQIKIWFQNRRMKWKKDHKLPN 204
>gi|312384141|gb|EFR28940.1| hypothetical protein AND_02489 [Anopheles darlingi]
Length = 322
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 243 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 300
>gi|301607693|ref|XP_002933441.1| PREDICTED: homeobox protein Hox-A9-like [Xenopus (Silurana)
tropicalis]
Length = 487
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ +YPWM+ + + G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEIA+ L
Sbjct: 384 SPVYPWMQRVNSCTGPV-YGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANAL 442
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 443 CLTERQIKIWFQNRRMKWKKE 463
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRM 264
KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRM
Sbjct: 187 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 239
>gi|38004412|gb|AAR07505.1| Abd-A-like protein [Schistosoma mansoni]
Length = 718
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 59/79 (74%), Gaps = 6/79 (7%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM S +R RQTYSRYQTLELEKEF Y+ YL+R+RRIEIAH L L
Sbjct: 499 IWPWMTVVGPNSVQ------RRRGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHNLCL 552
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMKLKKE
Sbjct: 553 TERQIKIWFQNRRMKLKKE 571
>gi|4760772|dbj|BAA77405.1| PLOX5-Dj [Dugesia japonica]
Length = 288
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
Y WM N ++ NKR+RQTY+R+QTLELEKEFH+NKYL+R+RRIEIAH L L
Sbjct: 169 FYSWM--NPKSNTDNPNNSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLIL 226
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 227 TERQIKIWFQNRRMKWKKE 245
>gi|347972379|ref|XP_003436887.1| AGAP004662-PC [Anopheles gambiae str. PEST]
gi|333467597|gb|EGK96615.1| AGAP004662-PC [Anopheles gambiae str. PEST]
Length = 307
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 23/128 (17%)
Query: 164 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS--------------------- 202
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 71 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 128
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 129 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 188
Query: 263 RMKLKKEV 270
RMKLKKE+
Sbjct: 189 RMKLKKEL 196
>gi|291391792|ref|XP_002712253.1| PREDICTED: homeobox D8-like [Oryctolagus cuniculus]
Length = 491
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 12/104 (11%)
Query: 169 PDVQDSCS-VSSQQDH--EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLE 225
PD + S + DH + + ++PWM+ G +R RQTYSR+QTLE
Sbjct: 362 PDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAP---------GRRRGRQTYSRFQTLE 412
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 413 LEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 456
>gi|158290042|ref|XP_311627.4| AGAP004662-PA [Anopheles gambiae str. PEST]
gi|74764409|sp|O76762.1|ABDA_ANOGA RecName: Full=Homeobox protein abdominal-A homolog
gi|3420838|gb|AAC31946.1| abdominal-A homeotic protein [Anopheles gambiae]
gi|157018341|gb|EAA07261.6| AGAP004662-PA [Anopheles gambiae str. PEST]
Length = 308
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 23/128 (17%)
Query: 164 NGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS--------------------- 202
+ +GS Q S SV Q G T +PW+ + ++
Sbjct: 72 DSLGSACSQLSSSVGGAQS--GLPDITRHPWLVTASQSALQKFASTDWMSNPFDRVVCGD 129
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 130 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 189
Query: 263 RMKLKKEV 270
RMKLKKE+
Sbjct: 190 RMKLKKEL 197
>gi|410911238|ref|XP_003969097.1| PREDICTED: homeobox protein Hox-A5a-like [Takifugu rubripes]
Length = 242
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ +G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 148 IYPWMRKIH-ISHEL-SGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 205
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 206 SERQIKIWFQNRRMKWKKD 224
>gi|268575336|ref|XP_002642647.1| C. briggsae CBR-MAB-5 protein [Caenorhabditis briggsae]
gi|9837166|gb|AAG00457.1|AF277989_1 MAB-5 [Caenorhabditis briggsae]
Length = 202
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 77/124 (62%), Gaps = 20/124 (16%)
Query: 150 MDRNGNPVG---LRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK 206
MD + NP L+A S G + + S + SQ ++PWMK
Sbjct: 72 MDNSTNPFAYNPLQATSANFG--ETRTSMATISQ---------PVFPWMK------MGGT 114
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L LTERQ+KIWFQNRRMK
Sbjct: 115 KGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKH 174
Query: 267 KKEV 270
KKE
Sbjct: 175 KKEA 178
>gi|281349542|gb|EFB25126.1| hypothetical protein PANDA_000660 [Ailuropoda melanoleuca]
Length = 130
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 3 VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTL 62
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 63 CLSERQVKIWFQNRRMKWKKDHKLPN 88
>gi|148229589|ref|NP_001027781.2| hox4 protein [Ciona intestinalis]
gi|70569912|dbj|BAE06501.1| transcription factor protein [Ciona intestinalis]
Length = 335
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 127 ATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGE 186
TN + KD +++D P F AD +G G S S + D E
Sbjct: 17 VTNGIIKDR---DVIDQGLPFFPTHHESAAALNLADMHGRGKEQAISSSKSSPEDDKTDE 73
Query: 187 D------------GATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNK 234
+ +YPWMK H + G KR R Y+R+Q LELEKEFHYN+
Sbjct: 74 EYQAMGSRRSSNGPPVVYPWMKRIHVSQVINGLESG-KRPRTAYTRHQVLELEKEFHYNR 132
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
YL+R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 133 YLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHKLPN 172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,528,304,406
Number of Sequences: 23463169
Number of extensions: 248079502
Number of successful extensions: 504686
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17388
Number of HSP's successfully gapped in prelim test: 1339
Number of HSP's that attempted gapping in prelim test: 483574
Number of HSP's gapped (non-prelim): 21275
length of query: 321
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 179
effective length of database: 9,027,425,369
effective search space: 1615909141051
effective search space used: 1615909141051
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)