BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13592
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8AWY9|HXB7A_DANRE Homeobox protein Hox-B7a OS=Danio rerio GN=hoxb7a PE=2 SV=1
Length = 227
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 9/84 (10%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E+ +YPWM+S TG KR RQTYSRYQTLELEKEFH+N+YLSR+RRIEIA
Sbjct: 129 ENNLRIYPWMRS---------TGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIA 179
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 180 HALCLTERQIKIWFQNRRMKWKKE 203
>sp|P04476|HXB7B_XENLA Homeobox protein Hox-B7-B OS=Xenopus laevis GN=hoxb7-b PE=2 SV=1
Length = 220
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 171 VQDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEK 228
+ +C+ + Q+D E + A L YPWM+S G KR RQTY+RYQTLELEK
Sbjct: 105 TKQNCTKAEQRDSELHNEANLRIYPWMRS---------AGSDRKRGRQTYTRYQTLELEK 155
Query: 229 EFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
EFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 156 EFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>sp|A1YFA5|HXB7_GORGO Homeobox protein Hox-B7 OS=Gorilla gorilla gorilla GN=HOXB7 PE=3
SV=1
Length = 217
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>sp|Q9TT89|HXB7_BOVIN Homeobox protein Hox-B7 OS=Bos taurus GN=HOXB7 PE=2 SV=1
Length = 217
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>sp|P09077|SCR_DROME Homeotic protein Sex combs reduced OS=Drosophila melanogaster
GN=Scr PE=1 SV=5
Length = 417
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>sp|P09629|HXB7_HUMAN Homeobox protein Hox-B7 OS=Homo sapiens GN=HOXB7 PE=1 SV=4
Length = 217
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>sp|P02833|ANTP_DROME Homeotic protein antennapedia OS=Drosophila melanogaster GN=Antp
PE=1 SV=1
Length = 378
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 79/127 (62%), Gaps = 12/127 (9%)
Query: 143 GKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDAS 202
G PP M + P + G +P Q+ S SS + LYPWM+S
Sbjct: 241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMP------SPLYPWMRSQFG-- 292
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 293 -KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 349 RMKWKKE 355
>sp|P18864|HXB7_RAT Homeobox protein Hox-B7 OS=Rattus norvegicus GN=Hoxb7 PE=2 SV=2
Length = 219
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGTERKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 OS=Mus musculus GN=Hoxb7 PE=2 SV=2
Length = 217
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 11/108 (10%)
Query: 164 NGVGSPDVQDSCSVSSQQDHE--GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRY 221
+GV D + Q+D + E +YPWM+S +G KR RQTY+RY
Sbjct: 97 SGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRS---------SGPDRKRGRQTYTRY 147
Query: 222 QTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
QTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>sp|Q91771|HXB7A_XENLA Homeobox protein Hox-B7-A OS=Xenopus laevis GN=hoxb7-a PE=2 SV=1
Length = 220
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 75/106 (70%), Gaps = 12/106 (11%)
Query: 166 VGSPDVQDSCSVSSQQDHEGEDGATL--YPWMKSNHDASYSCKTGGGNKRSRQTYSRYQT 223
G P Q+S + + Q++ E + A L YPWM+S G KR RQTY+RYQT
Sbjct: 103 AGDPTKQNS-AKAEQRESELHNEANLRIYPWMRS---------AGADRKRGRQTYTRYQT 152
Query: 224 LELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 153 LELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWKKE 198
>sp|A2T7F3|HXA7_PANTR Homeobox protein Hox-A7 OS=Pan troglodytes GN=HOXA7 PE=3 SV=1
Length = 230
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKADEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>sp|P31268|HXA7_HUMAN Homeobox protein Hox-A7 OS=Homo sapiens GN=HOXA7 PE=2 SV=3
Length = 230
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 147 GFNMDRNGNPVGLRADSN--GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDAS 202
G D GN D N G+ S + +C + + G A +YPWM+S
Sbjct: 71 GLGADAYGNLPCASYDQNIPGLCSDLAKGACDKTDEGALHGAAEANFRIYPWMRS----- 125
Query: 203 YSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNR 262
+G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNR
Sbjct: 126 ----SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181
Query: 263 RMKLKKE 269
RMK KKE
Sbjct: 182 RMKWKKE 188
>sp|P02830|HXA7_MOUSE Homeobox protein Hox-A7 OS=Mus musculus GN=Hoxa7 PE=2 SV=2
Length = 229
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
Query: 165 GVGSPDVQDSCSVSSQQDHEGEDGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQ 222
G+ S + +C + + G A+ +YPWM+S +G KR RQTY+RYQ
Sbjct: 90 GLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRS---------SGPDRKRGRQTYTRYQ 140
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
TLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 141 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187
>sp|P22574|HXB4A_DANRE Homeobox protein Hox-B4a OS=Danio rerio GN=hoxb4a PE=2 SV=3
Length = 246
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLEL 226
+P Q++ +VSS++D +YPWMK H S +GG KRSR Y+R Q LEL
Sbjct: 113 TPTSQNTSTVSSRKD------PVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLEL 166
Query: 227 EKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
EKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 167 EKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 214
>sp|Q24645|ANTP_DROSU Homeotic protein antennapedia OS=Drosophila subobscura GN=Antp PE=3
SV=1
Length = 394
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 6/81 (7%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+ LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 297 SPLYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 350
Query: 249 QLTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 351 CLTERQIKIWFQNRRMKWKKE 371
>sp|Q9IA25|HXA7_HETFR Homeobox protein Hox-A7 OS=Heterodontus francisci GN=HOXA7 PE=3
SV=1
Length = 208
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 11/103 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM++ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 117 QAESNFRIYPWMRN---------AGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 167
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
IAH L LTERQIKIWFQNRRMK KKE SS+T +EK E
Sbjct: 168 IAHALCLTERQIKIWFQNRRMKWKKET--KAGSSSTTSEEKQE 208
>sp|Q90VZ9|HXA7_CHICK Homeobox protein Hox-A7 OS=Gallus gallus GN=HOXA7 PE=2 SV=1
Length = 219
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ E +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 111 QAEANFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 161
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IAH L LTERQIKIWFQNRRMK KKE
Sbjct: 162 IAHALCLTERQIKIWFQNRRMKWKKE 187
>sp|Q9PWD2|HXA4_MORSA Homeobox protein Hox-A4 OS=Morone saxatilis GN=hoxa4 PE=3 SV=1
Length = 248
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCK-TGGGNKRSR 215
L A +G + CS++S+ G +YPWMK H ++ + TGG KRSR
Sbjct: 94 LTAAPDGGAGANASKDCSLASEVYPGVAKGKEPVVYPWMKKVHVSTVNASYTGGVPKRSR 153
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 154 TAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 212
>sp|P09071|HXA7_XENLA Homeobox protein Hox-A7 OS=Xenopus laevis GN=hoxa7 PE=2 SV=1
Length = 209
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
H+ + +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 103 HQPDSHFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 153
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
EIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 154 EIAHALCLTERQIKIWFQNRRMKWKKE 180
>sp|Q1KKS8|HXD4A_TAKRU Homeobox protein Hox-D4a OS=Takifugu rubripes GN=hoxd4a PE=3 SV=1
Length = 233
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 145 PPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG------ATLYPWMKSN 198
P G D++G P A + V + QQ+ + ++G A +YPWMK
Sbjct: 72 PRGHVHDKSGQPSPFNAQTESGAPVLVAGPRTCGQQQNTKSQNGTQAKQPAVVYPWMKKV 131
Query: 199 HDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKI 257
H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKI
Sbjct: 132 HVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 191
Query: 258 WFQNRRMKLKKEVLRPN 274
WFQNRRMK K+ PN
Sbjct: 192 WFQNRRMKWTKDHKLPN 208
>sp|O57374|HXD4A_DANRE Homeobox protein Hox-D4a OS=Danio rerio GN=hoxd4a PE=2 SV=2
Length = 236
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 137 ISEMVDG---KPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQQDHEGEDG----- 188
I V G +P G D+ P A + + + S + QQ+ + ++G
Sbjct: 62 ICSTVQGSSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRTCGQQQNTKTQNGIPTKQ 121
Query: 189 -ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
A +YPWMK H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIE AH
Sbjct: 122 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAH 181
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 182 TLSLSERQIKIWFQNRRMKWKKDHKLPN 209
>sp|P15861|HXB6A_DANRE Homeobox protein Hox-B6a OS=Danio rerio GN=hoxb6a PE=2 SV=1
Length = 228
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 72/98 (73%), Gaps = 6/98 (6%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGN--KRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
E + A +YPWM+ + SC GN +R RQTY+RYQTLELEKEFH+N+YL+R+RR
Sbjct: 125 EQKPSAPVYPWMQRMN----SCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 180
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
IEIAH L LTERQIKIWFQNRRMK KKE N S T+
Sbjct: 181 IEIAHALCLTERQIKIWFQNRRMKWKKENKLINCSQTS 218
>sp|P09023|HXB6_MOUSE Homeobox protein Hox-B6 OS=Mus musculus GN=Hoxb6 PE=2 SV=2
Length = 224
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>sp|Q9IA23|HXA5_HETFR Homeobox protein Hox-A5 OS=Heterodontus francisci GN=HOXA5 PE=3
SV=1
Length = 275
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQ--QDHEGEDGAT----LYPWMKSNHDASYSCKTGGGNKRSRQ 216
+GVG SP +D SS G+ A +YPWM+ H S+ G KR+R
Sbjct: 147 DGVGTSPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLH-ISHDSMGGPEGKRART 205
Query: 217 TYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK+
Sbjct: 206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 258
>sp|P17509|HXB6_HUMAN Homeobox protein Hox-B6 OS=Homo sapiens GN=HOXB6 PE=1 SV=4
Length = 224
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
>sp|P09019|HXB5_XENLA Homeobox protein Hox-B5 (Fragment) OS=Xenopus laevis GN=hoxb5 PE=2
SV=1
Length = 230
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 75/104 (72%), Gaps = 14/104 (13%)
Query: 171 VQDSCSVSSQQDHEGEDGAT--LYPWMKS---NHDASYSCKTGGGNKRSRQTYSRYQTLE 225
+QD+CS + G DG + ++PWM+ NHD + G KR+R Y+RYQTLE
Sbjct: 119 LQDNCSPGA----AGTDGQSPQIFPWMRKLHINHDMA-----GPDGKRARTAYTRYQTLE 169
Query: 226 LEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
LEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 170 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 213
>sp|P14840|HXB4_CHICK Homeobox protein Hox-B4 OS=Gallus gallus GN=HOXB4 PE=2 SV=1
Length = 245
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 167 GSPDVQDSCSVSSQQDHEGEDGA---TLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQ 222
G+P SCS +S +YPWMK H ++ + +GG KRSR Y+R Q
Sbjct: 102 GTPSPPPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQ 161
Query: 223 TLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 162 VLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPN 213
>sp|P09070|HXB4_XENLA Homeobox protein Hox-B4 OS=Xenopus laevis GN=hoxb4 PE=2 SV=1
Length = 232
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
Query: 174 SCSV-SSQQDH--EGEDGATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKE 229
SCS+ SS+ H E +YPWMK H + S + G KRSR Y+R Q LELEKE
Sbjct: 100 SCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKE 159
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
FHYN+YL+R+RR+EIAH L+L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 160 FHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 204
>sp|Q1KKX1|HXB6B_TAKRU Homeobox protein Hox-B6b OS=Takifugu rubripes GN=hoxb6b PE=3 SV=1
Length = 233
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 176 SVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKY 235
SVS + + +YPWM+ +A + G +R RQTY+RYQTLELEKEFH+N+Y
Sbjct: 121 SVSMGSSIDDKSSTLIYPWMQ-RMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRY 179
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
L+R+RRIEI+H L LTERQIKIWFQNRRMK KKE
Sbjct: 180 LTRRRRIEISHALCLTERQIKIWFQNRRMKWKKE 213
>sp|Q1KL13|HXA4A_TAKRU Homeobox protein Hox-A4a OS=Takifugu rubripes GN=hoxa4a PE=3 SV=1
Length = 255
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 159 LRADSNGVGSPDVQDSCSVSSQQDHEGEDG--ATLYPWMKSNHDASYSCKTGGG-NKRSR 215
L A +G CS++S+ G +YPWMK H + + GG KRSR
Sbjct: 94 LSAAPDGGAGAIASKDCSIASEVYPGVAKGKEPVVYPWMKKVHATNITAGYNGGVPKRSR 153
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
Y+R Q LELEKEFH+N+YL+R+RR+EIAH + L+ERQ+KIWFQNRRMK KKE PN
Sbjct: 154 TAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHKLPN 212
>sp|Q6B3N0|HXA5_CHICK Homeobox protein Hox-A5 OS=Gallus gallus GN=HOXA5 PE=2 SV=1
Length = 270
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 164 NGVG-SPDVQDSCSVSSQQDHEGEDGAT-------LYPWMKSNHDASYSCKTGGGNKRSR 215
+GVG S ++ SS+Q D +T +YPWM+ H S+ G KR+R
Sbjct: 141 DGVGTSSGTEEDTPASSEQASAPSDQSTAQPSQPQIYPWMRKLH-ISHDNIGGPEGKRAR 199
Query: 216 QTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>sp|P06798|HXA4_MOUSE Homeobox protein Hox-A4 OS=Mus musculus GN=Hoxa4 PE=2 SV=4
Length = 285
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 181 QDHEGEDG--ATLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLS 237
Q G G +YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+
Sbjct: 147 QGPAGPKGKEPVVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLT 206
Query: 238 RKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
R+RRIEIAH L L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 207 RRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243
>sp|O13074|HXB4A_TAKRU Homeobox protein Hox-B4a OS=Takifugu rubripes GN=hoxb4a PE=3 SV=2
Length = 288
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 190 TLYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YPWMK H + S TGG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 138 VVYPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 197
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 198 CLSERQIKIWFQNRRMKWKKDHKLPN 223
>sp|A2D5I1|HXD4_LAGLA Homeobox protein Hox-D4 OS=Lagothrix lagotricha GN=HOXD4 PE=3 SV=1
Length = 255
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPNTKG 220
>sp|A2D4P8|HXD4_ATEGE Homeobox protein Hox-D4 OS=Ateles geoffroyi GN=HOXD4 PE=3 SV=1
Length = 255
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPNTKG 220
>sp|A1YER7|HXD4_GORGO Homeobox protein Hox-D4 OS=Gorilla gorilla gorilla GN=HOXD4 PE=3
SV=1
Length = 255
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>sp|P10628|HXD4_MOUSE Homeobox protein Hox-D4 OS=Mus musculus GN=Hoxd4 PE=2 SV=3
Length = 250
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
>sp|A1YFD8|HXD4_SAGLB Homeobox protein Hox-D4 OS=Saguinus labiatus GN=HOXD4 PE=3 SV=1
Length = 255
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>sp|P09016|HXD4_HUMAN Homeobox protein Hox-D4 OS=Homo sapiens GN=HOXD4 PE=2 SV=3
Length = 255
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>sp|A2T6X6|HXD4_PANTR Homeobox protein Hox-D4 OS=Pan troglodytes GN=HOXD4 PE=3 SV=1
Length = 255
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>sp|A1YFY3|HXD4_PANPA Homeobox protein Hox-D4 OS=Pan paniscus GN=HOXD4 PE=3 SV=1
Length = 255
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>sp|A2D5Y4|HXA5_LEMCA Homeobox protein Hox-A5 OS=Lemur catta GN=HOXA5 PE=3 SV=1
Length = 270
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>sp|P24061|HXA7_COTJA Homeobox protein Hox-A7 OS=Coturnix coturnix japonica GN=HOXA7 PE=2
SV=1
Length = 242
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
G +YPWM+S +G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 112 GRGQFRIYPWMRS---------SGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEY 162
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
AH L LTERQIKIWFQNRRMK KKE
Sbjct: 163 AHALCLTERQIKIWFQNRRMKWKKE 187
>sp|Q07961|ABDA_TRICA Homeobox protein abdominal-A homolog OS=Tribolium castaneum
GN=ABD-A PE=2 SV=2
Length = 343
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 170 DVQDSCSVSSQQDHEGEDGATLYPWMK-----SNHDASYSCKTGGGNKRSRQTYSRYQTL 224
D +SCS + + YPWM S D G +R RQTY+R+QTL
Sbjct: 170 DPLNSCSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTL 229
Query: 225 ELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
ELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLKKE+
Sbjct: 230 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 275
>sp|P17278|HXD4_CHICK Homeobox protein Hox-D4 OS=Gallus gallus GN=HOXD4 PE=2 SV=1
Length = 235
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 121 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 180
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 181 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 225
>sp|Q2HJ67|HXA5_BOVIN Homeobox protein Hox-A5 OS=Bos taurus GN=HOXA5 PE=2 SV=1
Length = 270
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>sp|A2D5K9|HXA5_LAGLA Homeobox protein Hox-A5 OS=Lagothrix lagotricha GN=HOXA5 PE=3 SV=1
Length = 270
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 168 SPDVQDSCSVSSQQDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELE 227
+P + S S+ +YPWM+ H S+ G KR+R Y+RYQTLELE
Sbjct: 153 APASSEQASAQSEPSPAPPAQPQIYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELE 211
Query: 228 KEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
KEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 212 KEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
>sp|Q9IA11|HXD5_HETFR Homeobox protein Hox-D5 OS=Heterodontus francisci GN=HOXD5 PE=3
SV=1
Length = 252
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + +G KR+R Y+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 158 IYPWMKKMH-LNQEGLSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 216
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KK+
Sbjct: 217 TERQIKIWFQNRRMKWKKD 235
>sp|P07548|DFD_DROME Homeotic protein deformed OS=Drosophila melanogaster GN=Dfd PE=1
SV=2
Length = 586
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Query: 184 EGEDGA-TLYPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG +YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
>sp|Q5YLH5|HXA6_CHICK Homeobox protein Hox-A6 OS=Gallus gallus GN=HOXA6 PE=2 SV=1
Length = 231
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 14/110 (12%)
Query: 163 SNGVGSPDVQDSCSVSSQQDHEGED---GATLYPWMKSNHDASYSCKTGGGNKRSRQTYS 219
SNGV S V D EG D + +YPWM+ + + + G +R RQTY+
Sbjct: 113 SNGVQSKIVND----------EGTDRKYTSPVYPWMQRMNSCAGTV-YGAHGRRGRQTYT 161
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RYQTLELEKEFH+N+YL+R+RRIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 162 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,883,926
Number of Sequences: 539616
Number of extensions: 5902413
Number of successful extensions: 14206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 12259
Number of HSP's gapped (non-prelim): 1840
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)