Your job contains 1 sequence.
>psy13592
MSGIAQMSPYNQMNHNVMQSFNNWYQNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDAR
YFEKDAKYFAKDANSFDKDPAKYYDNFLDHNTMNYNHMNAFNQFHMKSNPNHTDYLRTNS
DKETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSNGVGSPDVQDSCSVSSQ
QDHEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR
RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAALP
KANYDWNGSQIGEVGSTEMSM
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13592
(321 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:96187 - symbol:Hoxb6 "homeobox B6" species:10090 ... 290 1.1e-29 2
RGD|1562142 - symbol:Hoxb6 "homeo box B6" species:10116 "... 290 1.1e-29 2
ZFIN|ZDB-GENE-990415-106 - symbol:hoxb6a "homeo box B6a" ... 292 4.7e-29 2
UNIPROTKB|E2QT40 - symbol:HOXB6 "Uncharacterized protein"... 290 4.7e-29 2
UNIPROTKB|F6UVZ9 - symbol:HOXB6 "Uncharacterized protein"... 290 4.7e-29 2
UNIPROTKB|F1RWG1 - symbol:HOXB6 "Uncharacterized protein"... 290 5.9e-29 2
UNIPROTKB|P17509 - symbol:HOXB6 "Homeobox protein Hox-B6"... 288 9.6e-29 2
ZFIN|ZDB-GENE-000823-6 - symbol:hoxb5b "homeo box B5b" sp... 278 6.6e-28 2
MGI|MGI:96208 - symbol:Hoxd4 "homeobox D4" species:10090 ... 284 1.7e-27 2
UNIPROTKB|F1RZG0 - symbol:HOXD4 "Uncharacterized protein"... 284 2.2e-27 2
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"... 284 2.8e-27 2
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "... 284 2.8e-27 2
UNIPROTKB|E1B7T2 - symbol:LOC100848736 "Uncharacterized p... 278 4.5e-27 2
UNIPROTKB|E2R5W2 - symbol:HOXA6 "Uncharacterized protein"... 278 4.5e-27 2
UNIPROTKB|Q24645 - symbol:Antp "Homeotic protein antennap... 281 5.8e-27 2
RGD|1590236 - symbol:Hoxa6 "homeobox A6" species:10116 "R... 278 9.4e-27 2
ZFIN|ZDB-GENE-000329-2 - symbol:hoxb7a "homeo box B7a" sp... 294 5.2e-26 1
FB|FBgn0003339 - symbol:Scr "Sex combs reduced" species:7... 290 1.4e-25 1
UNIPROTKB|P14840 - symbol:HOXB4 "Homeobox protein Hox-B4"... 287 2.9e-25 1
UNIPROTKB|E2QT33 - symbol:HOXB7 "Uncharacterized protein"... 286 3.6e-25 1
FB|FBgn0000014 - symbol:abd-A "abdominal A" species:7227 ... 266 4.2e-25 2
ZFIN|ZDB-GENE-990415-112 - symbol:hoxc4a "homeo box C4a" ... 285 4.6e-25 1
FB|FBgn0000439 - symbol:Dfd "Deformed" species:7227 "Dros... 275 5.9e-25 2
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"... 284 5.9e-25 1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"... 284 5.9e-25 1
UNIPROTKB|A4FUC1 - symbol:HOXC4 "HOXC4 protein" species:9... 284 5.9e-25 1
UNIPROTKB|E2QSM9 - symbol:HOXC4 "Uncharacterized protein"... 284 5.9e-25 1
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"... 284 5.9e-25 1
UNIPROTKB|P09017 - symbol:HOXC4 "Homeobox protein Hox-C4"... 284 5.9e-25 1
UNIPROTKB|F1SR58 - symbol:HOXC4 "Uncharacterized protein"... 284 5.9e-25 1
MGI|MGI:96195 - symbol:Hoxc4 "homeobox C4" species:10090 ... 284 5.9e-25 1
FB|FBgn0001077 - symbol:ftz "fushi tarazu" species:7227 "... 256 7.3e-25 2
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 283 7.6e-25 1
UNIPROTKB|Q90VZ9 - symbol:HOXA7 "Homeobox protein Hox-A7"... 283 7.6e-25 1
UNIPROTKB|F1N1K1 - symbol:HOXB7 "Homeobox protein Hox-B7"... 283 7.6e-25 1
UNIPROTKB|Q9TT89 - symbol:HOXB7 "Homeobox protein Hox-B7"... 283 7.6e-25 1
UNIPROTKB|F6UVS6 - symbol:HOXB7 "Uncharacterized protein"... 283 7.6e-25 1
UNIPROTKB|P09629 - symbol:HOXB7 "Homeobox protein Hox-B7"... 283 7.6e-25 1
UNIPROTKB|F1RWG2 - symbol:HOXB7 "Uncharacterized protein"... 283 7.6e-25 1
MGI|MGI:96188 - symbol:Hoxb7 "homeobox B7" species:10090 ... 283 7.6e-25 1
RGD|1559918 - symbol:Hoxb7 "homeo box B7" species:10116 "... 282 9.7e-25 1
FB|FBgn0260642 - symbol:Antp "Antennapedia" species:7227 ... 281 1.2e-24 1
MGI|MGI:96176 - symbol:Hoxa4 "homeobox A4" species:10090 ... 280 1.6e-24 1
MGI|MGI:96179 - symbol:Hoxa7 "homeobox A7" species:10090 ... 280 1.6e-24 1
RGD|2321880 - symbol:LOC100360577 "homeobox A4-like" spec... 280 1.6e-24 1
UNIPROTKB|F1SHT2 - symbol:HOXA4 "Uncharacterized protein"... 279 2.0e-24 1
UNIPROTKB|F1SHT3 - symbol:HOXA6 "Uncharacterized protein"... 278 2.6e-24 1
MGI|MGI:96178 - symbol:Hoxa6 "homeobox A6" species:10090 ... 278 2.6e-24 1
ZFIN|ZDB-GENE-990415-113 - symbol:hoxc6a "homeo box C6a" ... 278 2.6e-24 1
UNIPROTKB|E1B8D8 - symbol:HOXA7 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|F1MJX6 - symbol:HOXA4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|F1N257 - symbol:HOXB4 "Homeobox protein Hox-B4"... 277 3.3e-24 1
UNIPROTKB|G3MXN5 - symbol:HOXA4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|Q08DG5 - symbol:HOXB4 "Homeobox protein Hox-B4"... 277 3.3e-24 1
UNIPROTKB|E2QT52 - symbol:HOXB4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|E2R5U1 - symbol:HOXA7 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|F1PZZ7 - symbol:HOXA4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|F6UWC1 - symbol:HOXB4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 277 3.3e-24 1
UNIPROTKB|P17483 - symbol:HOXB4 "Homeobox protein Hox-B4"... 277 3.3e-24 1
UNIPROTKB|P31267 - symbol:HOXA6 "Homeobox protein Hox-A6"... 277 3.3e-24 1
UNIPROTKB|P31268 - symbol:HOXA7 "Homeobox protein Hox-A7"... 277 3.3e-24 1
UNIPROTKB|Q00056 - symbol:HOXA4 "Homeobox protein Hox-A4"... 277 3.3e-24 1
UNIPROTKB|F1RWG5 - symbol:HOXB4 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|F1SHT4 - symbol:HOXA7 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|I3LKE3 - symbol:HOXA7 "Uncharacterized protein"... 277 3.3e-24 1
MGI|MGI:96185 - symbol:Hoxb4 "homeobox B4" species:10090 ... 277 3.3e-24 1
RGD|1560113 - symbol:Hoxb4 "homeo box B4" species:10116 "... 277 3.3e-24 1
ZFIN|ZDB-GENE-990415-105 - symbol:hoxb4a "homeo box B4a" ... 277 3.3e-24 1
UNIPROTKB|E1BQ67 - symbol:HOXB5 "Homeobox protein Hox-B5"... 251 3.9e-24 2
UNIPROTKB|E1BZJ6 - symbol:HOXB5 "Homeobox protein Hox-B5"... 251 3.9e-24 2
UNIPROTKB|F1NMG4 - symbol:LOC100858374 "Uncharacterized p... 276 4.2e-24 1
UNIPROTKB|P17277 - symbol:HOXA4 "Homeobox protein Hox-A4"... 276 4.2e-24 1
UNIPROTKB|E9PT77 - symbol:LOC100360577 "Protein LOC100360... 276 4.2e-24 1
UNIPROTKB|F1MEU5 - symbol:HOXC6 "Uncharacterized protein"... 275 5.3e-24 1
UNIPROTKB|E2QSK8 - symbol:HOXC6 "Uncharacterized protein"... 275 5.3e-24 1
UNIPROTKB|P09630 - symbol:HOXC6 "Homeobox protein Hox-C6"... 275 5.3e-24 1
UNIPROTKB|I3L9Q6 - symbol:HOXC6 "Uncharacterized protein"... 275 5.3e-24 1
MGI|MGI:96197 - symbol:Hoxc6 "homeobox C6" species:10090 ... 275 5.3e-24 1
UNIPROTKB|G3V841 - symbol:Hoxc6 "Homeo box C6" species:10... 275 5.3e-24 1
ZFIN|ZDB-GENE-000823-7 - symbol:hoxb6b "homeo box B6b" sp... 275 5.3e-24 1
UNIPROTKB|E1BRT6 - symbol:HOXD8 "Homeobox protein Hox-D8"... 247 6.2e-24 2
UNIPROTKB|E2QT43 - symbol:HOXB5 "Uncharacterized protein"... 274 6.8e-24 1
UNIPROTKB|P09067 - symbol:HOXB5 "Homeobox protein Hox-B5"... 274 6.8e-24 1
UNIPROTKB|F1RWG0 - symbol:HOXB5 "Uncharacterized protein"... 274 6.8e-24 1
MGI|MGI:96186 - symbol:Hoxb5 "homeobox B5" species:10090 ... 274 6.8e-24 1
RGD|1562292 - symbol:Hoxb5 "homeo box B5" species:10116 "... 274 6.8e-24 1
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ... 274 6.8e-24 1
ZFIN|ZDB-GENE-000822-1 - symbol:hoxc6b "homeo box C6b" sp... 273 8.7e-24 1
ZFIN|ZDB-GENE-000823-4 - symbol:hoxa4a "homeo box A4a" sp... 273 8.7e-24 1
ZFIN|ZDB-GENE-000823-9 - symbol:hoxa5a "homeo box A5a" sp... 273 8.7e-24 1
ZFIN|ZDB-GENE-980526-70 - symbol:hoxb5a "homeo box B5a" s... 273 8.7e-24 1
UNIPROTKB|Q5YLH5 - symbol:HOXA6 "Homeobox protein Hox-A6"... 272 1.1e-23 1
UNIPROTKB|Q6B3N0 - symbol:HOXA5 "Homeobox protein Hox-A5"... 272 1.1e-23 1
UNIPROTKB|Q2HJ67 - symbol:HOXA5 "Homeobox protein Hox-A5"... 272 1.1e-23 1
UNIPROTKB|E2R5W8 - symbol:HOXA5 "Uncharacterized protein"... 272 1.1e-23 1
UNIPROTKB|P20719 - symbol:HOXA5 "Homeobox protein Hox-A5"... 272 1.1e-23 1
UNIPROTKB|E1U314 - symbol:Hoxa5 "Uncharacterized protein"... 272 1.1e-23 1
MGI|MGI:96177 - symbol:Hoxa5 "homeobox A5" species:10090 ... 272 1.1e-23 1
RGD|6492497 - symbol:LOC100911546 "homeobox protein Hox-A... 272 1.1e-23 1
WARNING: Descriptions of 1176 database sequences were not reported due to the
limiting value of parameter V = 100.
>MGI|MGI:96187 [details] [associations]
symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI] [GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
Length = 224
Score = 290 (107.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 59/99 (59%), Positives = 73/99 (73%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
TERQIKIWFQNRRMK KKE +S++ + E+ E P
Sbjct: 186 TERQIKIWFQNRRMKWKKE--SKLLSASQLSAEEEEEKP 222
Score = 54 (24.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKDAKYFAKDANS---FDKDPAK 82
Q++ F + YY P + PC Y A Y EKDA A+ F +P K
Sbjct: 49 QDKGFAASSYYPPAGGGYGRAA---PCDYGPAPAFYREKDAACALSGADEPPPFHPEPRK 105
>RGD|1562142 [details] [associations]
symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
Length = 224
Score = 290 (107.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 59/99 (59%), Positives = 73/99 (73%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
TERQIKIWFQNRRMK KKE +S++ + E+ E P
Sbjct: 186 TERQIKIWFQNRRMKWKKE--SKLLSASQLSAEEEEEKP 222
Score = 54 (24.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKDAKYFAKDANS---FDKDPAK 82
Q++ F + YY P + PC Y A Y EKDA A+ F +P K
Sbjct: 49 QDKGFAASSYYPPAGGGYGRAA---PCDYGPAPAFYREKDAACALSGADEPPPFHPEPRK 105
>ZFIN|ZDB-GENE-990415-106 [details] [associations]
symbol:hoxb6a "homeo box B6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
Uniprot:P15861
Length = 228
Score = 292 (107.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 59/101 (58%), Positives = 74/101 (73%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E + A +YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIE
Sbjct: 125 EQKPSAPVYPWMQRMNSCNGTF--GNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 182
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
IAH L LTERQIKIWFQNRRMK KKE N S T+ +E+
Sbjct: 183 IAHALCLTERQIKIWFQNRRMKWKKENKLINCSQTSGEEEE 223
Score = 46 (21.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 31 HPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKD 65
+P+ +Y+ N + PC Y Y EKD
Sbjct: 54 YPSSFYQQANGAYSRATAAGPCDYATASF-YREKD 87
>UNIPROTKB|E2QT40 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
Length = 224
Score = 290 (107.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 59/99 (59%), Positives = 73/99 (73%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
TERQIKIWFQNRRMK KKE +S++ + E+ E P
Sbjct: 186 TERQIKIWFQNRRMKWKKE--SKLLSASQLSAEEEEEKP 222
Score = 48 (22.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKD---AKYFAKDANSFDKDPAK 82
Q++ F + YY P + PC Y A Y EK+ A A++ F +P K
Sbjct: 49 QDKGFAASSYYPPAGGGYGRAA---PCDYGPAPAFYREKESACALSGAEEPPRFHPEPRK 105
>UNIPROTKB|F6UVZ9 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
EMBL:AAEX03006516 Uniprot:F6UVZ9
Length = 232
Score = 290 (107.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 59/99 (59%), Positives = 73/99 (73%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
TERQIKIWFQNRRMK KKE +S++ + E+ E P
Sbjct: 186 TERQIKIWFQNRRMKWKKE--SKLLSASQLSAEEEEEKP 222
Score = 48 (22.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKD---AKYFAKDANSFDKDPAK 82
Q++ F + YY P + PC Y A Y EK+ A A++ F +P K
Sbjct: 49 QDKGFAASSYYPPAGGGYGRAA---PCDYGPAPAFYREKESACALSGAEEPPRFHPEPRK 105
>UNIPROTKB|F1RWG1 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0034101
"erythrocyte homeostasis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
KEGG:ssc:100627849 Uniprot:F1RWG1
Length = 224
Score = 290 (107.1 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 59/99 (59%), Positives = 73/99 (73%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
TERQIKIWFQNRRMK KKE +S++ + E+ E P
Sbjct: 186 TERQIKIWFQNRRMKWKKE--SKLLSASQLSAEEEEEKP 222
Score = 47 (21.6 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKDAKYFAKDANS---FDKDPAK 82
Q++ F + YY P + PC Y A Y EK++ A+ F +P K
Sbjct: 49 QDKGFAASSYYPPAGGGYGRAA---PCDYGPAPAFYREKESACALSGADEPPPFHPEPRK 105
>UNIPROTKB|P17509 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
GermOnline:ENSG00000108511 Uniprot:P17509
Length = 224
Score = 288 (106.4 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 55/79 (69%), Positives = 64/79 (81%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + + S G +R RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L L
Sbjct: 127 VYPWMQRMNSCN-SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 185
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 186 TERQIKIWFQNRRMKWKKE 204
Score = 47 (21.6 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYEDRDARYFEKDAKYFAKDANS---FDKDPAK 82
Q++ F + YY P + PC Y A Y EK++ A+ F +P K
Sbjct: 49 QDKGFATSSYYPPAGGGYGRAA---PCDYGPAPAFYREKESACALSGADEQPPFHPEPRK 105
>ZFIN|ZDB-GENE-000823-6 [details] [associations]
symbol:hoxb5b "homeo box B5b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0007420
"brain development" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-6 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0010002 GeneTree:ENSGT00700000104189
HOVERGEN:HBG016849 eggNOG:NOG236516 HOGENOM:HOG000231178
EMBL:AL645798 OrthoDB:EOG45MN66 EMBL:AF071253 EMBL:BC078285
EMBL:DQ060547 EMBL:X12803 EMBL:Y14526 IPI:IPI00489481
RefSeq:NP_571612.2 UniGene:Dr.75783 ProteinModelPortal:P09013
SMR:P09013 Ensembl:ENSDART00000076161 GeneID:58052 KEGG:dre:58052
CTD:58052 InParanoid:P09013 NextBio:20892316 Bgee:P09013
Uniprot:P09013
Length = 276
Score = 278 (102.9 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 57/95 (60%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
DG T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 177 DGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 234
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 235 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 269
Score = 49 (22.3 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 29/144 (20%), Positives = 56/144 (38%)
Query: 8 SPYNQMNHNVMQSFNNWYQNQT-FHPNQYYEPYNNNCPTKSEPNPCQYE--DRDARYFE- 63
S Y +N+ + N Y++ T H + YN + + PN + ++R F+
Sbjct: 17 SDYQLLNYGTNGAMNASYRDSTSMHSGSFGYNYNGIDLSVNRPNNGHFGAVGDNSRAFQN 76
Query: 64 --KDAKYFAKDANSFDKDPAKYYDNFLDHNTMNYNHMNAFNQFHMKSNPNHTDYLRTNSD 121
++ +Y + DP L T + + + +S P L +++
Sbjct: 77 PSQETRYRQSSCSLSSPDP-------LSCATSDTLELKGSSPPSDQSTPTGNSRLTNSNN 129
Query: 122 KETLNATNFVPKDEA--ISEMVDG 143
+ N+T+F DE SE +G
Sbjct: 130 LTSSNSTHFADTDETNVSSETEEG 153
Score = 42 (19.8 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 84 YDNFLDHNTMNYNHMNAFNQFHMKSNPNHT 113
Y N D+ +NY A N + S H+
Sbjct: 13 YPNGSDYQLLNYGTNGAMNASYRDSTSMHS 42
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 284 (105.0 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
Score = 39 (18.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 51 PCQYEDRDARYF-EKDAKYFAKDANSFDKDPAKYY 84
PC+ E Y E+ A Y+ A D P+ Y
Sbjct: 19 PCE-EYLQGGYLGEQGADYYGSGAQGADFQPSGLY 52
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 284 (105.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 132 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 191
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 192 LCLSERQIKIWFQNRRMKWKKDHKLPN 218
Score = 38 (18.4 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 51 PCQYEDRDARYF-EKDAKYFAKDANSFDKDPAKYY 84
PC+ E Y E+ A Y++ A D P Y
Sbjct: 19 PCE-EYLQGGYLGEQGADYYSSGAQGADFQPPGLY 52
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 284 (105.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 134 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 193
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 194 LCLSERQIKIWFQNRRMKWKKDHKLPN 220
Score = 37 (18.1 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 32 PNQYYEPYNNNCPTKSEPNP 51
P +Y CP S P P
Sbjct: 87 PGGHYGASGEPCPAPSAPPP 106
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 284 (105.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 129 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 188
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 189 LCLSERQIKIWFQNRRMKWKKDHKLPN 215
Score = 37 (18.1 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 51 PCQYEDRDARYF-EKDAKYFAKDANSFDKDPAKYY 84
PC+ E Y E+ A Y+ A D P Y
Sbjct: 19 PCE-EYLQGGYLGEQGADYYGSGAQGSDFQPPGLY 52
>UNIPROTKB|E1B7T2 [details] [associations]
symbol:LOC100848736 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:DAAA02010938 IPI:IPI00708268
Ensembl:ENSBTAT00000033679 Uniprot:E1B7T2
Length = 249
Score = 278 (102.9 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 126 EGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 184
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 185 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQPSGEDAEA 229
Score = 41 (19.5 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 30 FHPNQYYEPYNNNCPTKS 47
F P Q Y+P +++ P K+
Sbjct: 105 FSPEQQYKPDSSSVPGKA 122
>UNIPROTKB|E2R5W2 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 CTD:3203 KO:K09306
OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:AAEX03009390
RefSeq:XP_854141.1 ProteinModelPortal:E2R5W2
Ensembl:ENSCAFT00000004729 GeneID:611383 KEGG:cfa:611383
NextBio:20896920 Uniprot:E2R5W2
Length = 233
Score = 278 (102.9 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 126 EGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 184
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 185 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQPSGEDAEA 229
Score = 41 (19.5 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 30 FHPNQYYEPYNNNCPTKS 47
F P Q Y+P +++ P K+
Sbjct: 105 FSPEQQYKPDSSSVPGKA 122
>UNIPROTKB|Q24645 [details] [associations]
symbol:Antp "Homeotic protein antennapedia" species:7241
"Drosophila subobscura" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007384 "specification of
segmental identity, thorax" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009948 GO:GO:0007384 EMBL:X60995 EMBL:X62246 PIR:S26492
ProteinModelPortal:Q24645 SMR:Q24645 FlyBase:FBgn0012932
Uniprot:Q24645
Length = 394
Score = 281 (104.0 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 56/79 (70%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 299 LYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 352
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 353 TERQIKIWFQNRRMKWKKE 371
Score = 37 (18.1 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 98 MNAFNQFHMKSNPNH 112
++A H NPNH
Sbjct: 37 LDAQQMHHYSQNPNH 51
>RGD|1590236 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0048706 "embryonic skeletal system development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1590236 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 CTD:3203
KO:K09306 OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:CH474011
EMBL:AC122669 RefSeq:NP_001178016.1 RefSeq:XP_003749802.1
RefSeq:XP_003752227.1 UniGene:Rn.213374 Ensembl:ENSRNOT00000008542
GeneID:100909604 GeneID:100911511 GeneID:685732 KEGG:rno:100909604
KEGG:rno:100911511 KEGG:rno:685732 NextBio:730342 Uniprot:G3V6T4
Length = 233
Score = 278 (102.9 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 126 EGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 184
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 185 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQASGEDSEA 229
Score = 38 (18.4 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 41 NNCPTKSEPNPCQYEDRDARYFEKDAKYFAKDANSF--DKD--PAKYYDNFLDHNTMNYN 96
++ P K+ +PC Y+ ++ A Y A+ F DKD A N +Y
Sbjct: 45 SSLPDKTYTSPCFYQQSNSVLACNRASY-EYGASCFYSDKDLSGASPSGNSKQRGPGDYL 103
Query: 97 HMNAFNQFHMKSN 109
H + Q+ S+
Sbjct: 104 HFSPEQQYKPDSS 116
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 60/88 (68%), Positives = 67/88 (76%)
Query: 183 HEG-EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRR 241
H+ E+ +YPWM+S TG KR RQTYSRYQTLELEKEFH+N+YLSR+RR
Sbjct: 125 HQNNENNLRIYPWMRS---------TGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRR 175
Query: 242 IEIAHELQLTERQIKIWFQNRRMKLKKE 269
IEIAH L LTERQIKIWFQNRRMK KKE
Sbjct: 176 IEIAHALCLTERQIKIWFQNRRMKWKKE 203
>FB|FBgn0003339 [details] [associations]
symbol:Scr "Sex combs reduced" species:7227 "Drosophila
melanogaster" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007379 "segment specification" evidence=NAS] [GO:0007381
"specification of segmental identity, labial segment" evidence=TAS]
[GO:0045498 "sex comb development" evidence=IMP;NAS] [GO:0007548
"sex differentiation" evidence=TAS] [GO:0007432 "salivary gland
boundary specification" evidence=NAS;TAS] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0042803 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0007494 EMBL:AE001572
GO:GO:0007548 GO:GO:0000977 GO:GO:0045498 GO:GO:0007432 PDB:2R5Y
PDB:2R5Z PDBsum:2R5Y PDBsum:2R5Z GO:GO:0007381 eggNOG:NOG236516
ChiTaRS:scrib EMBL:X14475 EMBL:X77075 EMBL:X77076 EMBL:U10506
EMBL:X05228 PIR:S03631 RefSeq:NP_524248.2 RefSeq:NP_996165.1
ProteinModelPortal:P09077 SMR:P09077 DIP:DIP-40017N IntAct:P09077
STRING:P09077 EnsemblMetazoa:FBtr0081657 EnsemblMetazoa:FBtr0081658
GeneID:40833 KEGG:dme:Dmel_CG1030 CTD:109559 FlyBase:FBgn0003339
InParanoid:P09077 OMA:ISCKYAN OrthoDB:EOG4H44KH PhylomeDB:P09077
EvolutionaryTrace:P09077 GenomeRNAi:40833 NextBio:820837
Bgee:P09077 GermOnline:CG1030 Uniprot:P09077
Length = 417
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWMK H + + G KR R +Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 304 IYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 363
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 364 TERQIKIWFQNRRMKWKKE 382
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 58/103 (56%), Positives = 72/103 (69%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 129 VYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLC 188
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L+ERQIKIWFQNRRMK KK+ PN S+ + L+ PP
Sbjct: 189 LSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPSSSSASLQIPP 231
>UNIPROTKB|E2QT33 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
Length = 237
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/113 (56%), Positives = 73/113 (64%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAA 298
H L LTERQIKIWFQNRRMK KKE +T L A +PA AA
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKENKSTGPGATASSAGSLRA---LLPAVRAA 221
>FB|FBgn0000014 [details] [associations]
symbol:abd-A "abdominal A" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
system development" evidence=TAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007385 "specification of segmental identity, abdomen"
evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
[GO:0035053 "dorsal vessel heart proper cell fate commitment"
evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
evidence=IMP] [GO:0007400 "neuroblast fate determination"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0048806 "genitalia development"
evidence=IMP] [GO:0010002 "cardioblast differentiation"
evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
[GO:0048636 "positive regulation of muscle organ development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
cell fate specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
GO:GO:0007438 Uniprot:P29555
Length = 590
Score = 266 (98.7 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
Identities = 54/85 (63%), Positives = 64/85 (75%)
Query: 190 TLYPWMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
TL WM S + ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIA
Sbjct: 373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
Query: 246 HELQLTERQIKIWFQNRRMKLKKEV 270
H L LTERQIKIWFQNRRMKLKKE+
Sbjct: 433 HALCLTERQIKIWFQNRRMKLKKEL 457
Score = 50 (22.7 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 2 SGIAQMSPYNQMNHNVMQSFNNWYQNQTFH--PNQYYEPYNN 41
S ++ SP+ Q + V Q N Q Q H Q++ Y++
Sbjct: 113 SPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSS 154
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 65/131 (49%), Positives = 82/131 (62%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + G KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 133 VYPWMKKIHVSTVNSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLV 192
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNI----SSTTMLDE---KLEAPPVFMPAYSAALPKA 302
L+ERQIKIWFQNRRMK KK+ PN SS+T + A V A + A
Sbjct: 193 LSERQIKIWFQNRRMKWKKDHRLPNTKVRSSSSTGISSGSNTSSAAGVVAAASTTNTMSA 252
Query: 303 NYDWNGSQIGE 313
+ D +G++ GE
Sbjct: 253 SEDLSGTERGE 263
>FB|FBgn0000439 [details] [associations]
symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
"embryonic morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
GermOnline:CG2189 Uniprot:P07548
Length = 586
Score = 275 (101.9 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 58/95 (61%), Positives = 67/95 (70%)
Query: 184 EGEDGATL-YPWMKSNHDASY---SCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRK 239
E DG + YPWMK H A S + G KR R Y+R+Q LELEKEFHYN+YL+R+
Sbjct: 335 ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRR 394
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPN 274
RRIEIAH L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 395 RRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPN 429
Score = 39 (18.8 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 11/55 (20%), Positives = 25/55 (45%)
Query: 80 PAKYYDNFL--DHNTMNYNHMNAFNQFHMKSNPNHTDYLRTNSDKETLNATNFVP 132
PA +++ HN +++H + + H SN + + + ++ + N N P
Sbjct: 82 PADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATP 136
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/105 (57%), Positives = 73/105 (69%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 123 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 182
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 183 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 227
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/105 (57%), Positives = 73/105 (69%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 121 AVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 180
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPNI---SSTTMLDEKLEAPP 289
L L+ERQIKIWFQNRRMK KK+ PN SS++ + L+ P
Sbjct: 181 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVP 225
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV-FMPA-YSAALPKANYDWN 307
L+ERQIKIWFQNRRMK KK+ PN + APP P+ SAA P + D +
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPNTKVRS-------APPAGAAPSTLSAATPGTSEDHS 247
Query: 308 GS 309
S
Sbjct: 248 QS 249
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV-FMPA-YSAALPKANYDWN 307
L+ERQIKIWFQNRRMK KK+ PN + APP P+ SAA P + D +
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPNTKVRS-------APPAGAAPSTLSAATPGTSEDHS 247
Query: 308 GS 309
S
Sbjct: 248 QS 249
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H S + TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 191 LCLSERQIKIWFQNRRMKWKKDHKLPN 217
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV-FMPA-YSAALPKANYDWN 307
L+ERQIKIWFQNRRMK KK+ PN + APP P+ SAA P + D +
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPNTKVRS-------APPAGAAPSTLSAATPGTSEDHS 247
Query: 308 GS 309
S
Sbjct: 248 QS 249
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV-FMPA-YSAALPKANYDWN 307
L+ERQIKIWFQNRRMK KK+ PN + APP P+ SAA P + D +
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPNTKVRS-------APPAGAAPSTLSAATPGTSEDHS 247
Query: 308 GS 309
S
Sbjct: 248 QS 249
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 135 VYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLC 194
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPV-FMPA-YSAALPKANYDWN 307
L+ERQIKIWFQNRRMK KK+ PN + APP P+ SAA P + D +
Sbjct: 195 LSERQIKIWFQNRRMKWKKDHRLPNTKVRS-------APPAGAAPSTLSAATPGTSEDHS 247
Query: 308 GS 309
S
Sbjct: 248 QS 249
>FB|FBgn0001077 [details] [associations]
symbol:ftz "fushi tarazu" species:7227 "Drosophila
melanogaster" [GO:0007506 "gonadal mesoderm development"
evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000980 "RNA
polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0007366 "periodic partitioning by pair rule gene"
evidence=NAS;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0007350 "blastoderm segmentation" evidence=TAS]
[GO:0001708 "cell fate specification" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS] [GO:0035289
"posterior head segmentation" evidence=TAS] [GO:0035290 "trunk
segmentation" evidence=TAS] [GO:0035282 "segmentation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0007417 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007506 GO:GO:0000980 GO:GO:0001077
GO:GO:0000122 GO:GO:0007366 EMBL:AE001572 GO:GO:0035289
GO:GO:0008354 GO:GO:0035290 PDB:2XHS PDBsum:2XHS EMBL:X00854
EMBL:BT022173 EMBL:X78905 EMBL:K01947 PIR:A93334 RefSeq:NP_477498.1
UniGene:Dm.24032 PDB:1FTZ PDBsum:1FTZ ProteinModelPortal:P02835
SMR:P02835 DIP:DIP-18500N IntAct:P02835 MINT:MINT-156974
STRING:P02835 EnsemblMetazoa:FBtr0081625 GeneID:40834
KEGG:dme:Dmel_CG2047 CTD:40834 FlyBase:FBgn0001077 eggNOG:NOG249057
InParanoid:P02835 OMA:NRYITRR OrthoDB:EOG44TMQT PhylomeDB:P02835
EvolutionaryTrace:P02835 GenomeRNAi:40834 NextBio:820846
Bgee:P02835 GermOnline:CG2047 InterPro:IPR005567 Pfam:PF03867
Uniprot:P02835
Length = 410
Score = 256 (95.2 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 49/83 (59%), Positives = 64/83 (77%)
Query: 187 DGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+GA + W + CK +KR+RQTY+RYQTLELEKEFH+N+Y++R+RRI+IA+
Sbjct: 233 NGAGDFNWSHIEETLASDCKD---SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIAN 289
Query: 247 ELQLTERQIKIWFQNRRMKLKKE 269
L L+ERQIKIWFQNRRMK KK+
Sbjct: 290 ALSLSERQIKIWFQNRRMKSKKD 312
Score = 47 (21.6 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 96 NHMNAFNQFHMKS-NPNHTDYLRTNSD-KETLNATNFVPKDEAISE 139
++MN +N +H S P + D +N+ + T N + P+ E+ SE
Sbjct: 14 DNMNMYNMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYYPQ-ESYSE 58
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 61/105 (58%), Positives = 73/105 (69%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ E +YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 78 NQAEANFRIYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 128
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
EIAH L LTERQIKIWFQNRRMK KKE + SST +E A
Sbjct: 129 EIAHALCLTERQIKIWFQNRRMKWKKEH-KEESSSTPAPNEPTSA 172
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 61/105 (58%), Positives = 73/105 (69%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ E +YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRI
Sbjct: 110 NQAEANFRIYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 160
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
EIAH L LTERQIKIWFQNRRMK KKE + SST +E A
Sbjct: 161 EIAHALCLTERQIKIWFQNRRMKWKKEH-KEESSSTPAPNEPTSA 204
>UNIPROTKB|F1N1K1 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 IPI:IPI00699636
UniGene:Bt.91790 OMA:WMRSSGT EMBL:DAAA02049062
Ensembl:ENSBTAT00000007292 Uniprot:F1N1K1
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKE 195
>UNIPROTKB|Q9TT89 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
NextBio:20805731 Uniprot:Q9TT89
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKE 195
>UNIPROTKB|F6UVS6 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 CTD:3217 OMA:WMRSSGT Ensembl:ENSCAFT00000026688
EMBL:AAEX03006516 RefSeq:XP_851221.1 GeneID:608962 KEGG:cfa:608962
Uniprot:F6UVS6
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKE 195
>UNIPROTKB|P09629 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0090190 GO:GO:0048704
eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AC103702 CTD:3217 EMBL:M16937 EMBL:AK290653
EMBL:AK223249 EMBL:BC015345 EMBL:S49765 EMBL:M30598 IPI:IPI00297418
PIR:A28030 RefSeq:NP_004493.3 UniGene:Hs.436181
ProteinModelPortal:P09629 SMR:P09629 IntAct:P09629 STRING:P09629
PhosphoSite:P09629 DMDM:311033482 PRIDE:P09629 DNASU:3217
Ensembl:ENST00000239165 GeneID:3217 KEGG:hsa:3217 UCSC:uc002inv.3
GeneCards:GC17M046684 HGNC:HGNC:5118 HPA:HPA049940 MIM:142962
neXtProt:NX_P09629 InParanoid:P09629 OMA:WMRSSGT PhylomeDB:P09629
GenomeRNAi:3217 NextBio:12800 ArrayExpress:P09629 Bgee:P09629
CleanEx:HS_HOXB7 Genevestigator:P09629 GermOnline:ENSG00000120087
Uniprot:P09629
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HTLCLTERQIKIWFQNRRMKWKKE 195
>UNIPROTKB|F1RWG2 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
Uniprot:F1RWG2
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKE 195
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HTLCLTERQIKIWFQNRRMKWKKE 195
>RGD|1559918 [details] [associations]
symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
Uniprot:P18864
Length = 219
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 57/84 (67%), Positives = 64/84 (76%)
Query: 186 EDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
E +YPWM+S+ G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIA
Sbjct: 121 ESNFRIYPWMRSS---------GTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQIKIWFQNRRMK KKE
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKE 195
>FB|FBgn0260642 [details] [associations]
symbol:Antp "Antennapedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007384
"specification of segmental identity, thorax" evidence=IMP]
[GO:0009948 "anterior/posterior axis specification" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0007379 "segment specification"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007507 "heart development"
evidence=IEP] [GO:0007383 "specification of segmental identity,
antennal segment" evidence=IMP] [GO:0048542 "lymph gland
development" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0007507 GO:GO:0042694 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007494 GO:GO:0014019 EMBL:AE001572 EMBL:X03790
EMBL:X03791 EMBL:M20704 EMBL:M20705 EMBL:AY060407 EMBL:M14496
EMBL:K01948 EMBL:M12009 PIR:A23450 RefSeq:NP_996167.1
RefSeq:NP_996168.1 RefSeq:NP_996170.1 RefSeq:NP_996175.1
RefSeq:NP_996176.1 UniGene:Dm.3803 PDB:1AHD PDB:1HOM PDB:1SAN
PDB:2HOA PDB:9ANT PDBsum:1AHD PDBsum:1HOM PDBsum:1SAN PDBsum:2HOA
PDBsum:9ANT ProteinModelPortal:P02833 SMR:P02833 DIP:DIP-51405N
IntAct:P02833 MINT:MINT-763892 STRING:P02833 PRIDE:P02833
EnsemblMetazoa:FBtr0081647 EnsemblMetazoa:FBtr0081652
EnsemblMetazoa:FBtr0081654 EnsemblMetazoa:FBtr0081655 GeneID:40835
KEGG:dme:Dmel_CG1028 CTD:40835 FlyBase:FBgn0260642 eggNOG:NOG238660
HOGENOM:HOG000142851 InParanoid:P02833 OMA:FPPYDRM
OrthoDB:EOG43XSKG PhylomeDB:P02833 EvolutionaryTrace:P02833
GenomeRNAi:40835 NextBio:820851 Bgee:P02833 GermOnline:CG1028
GO:GO:0009948 GO:GO:0048542 GO:GO:0007383 GO:GO:0007384
Uniprot:P02833
Length = 378
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 56/79 (70%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
LYPWM+S C+ KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 283 LYPWMRSQFG---KCQE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 336
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 337 TERQIKIWFQNRRMKWKKE 355
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 59/104 (56%), Positives = 69/104 (66%)
Query: 191 LYPWMKSNH-DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H A S GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 159 VYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 218
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMP 293
L+ERQ+KIWFQNRRMK KK+ PN T M + P P
Sbjct: 219 LSERQVKIWFQNRRMKWKKDHKLPN---TKMRSSNTASAPAGPP 259
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/113 (55%), Positives = 76/113 (67%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 118 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 168
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAALPKAN 303
TERQIKIWFQNRRMK KKE + + T AP +P+ S A KA+
Sbjct: 169 TERQIKIWFQNRRMKWKKEHKDESQAPTA-------APEDAVPSVSTAADKAD 214
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 66/141 (46%), Positives = 81/141 (57%)
Query: 138 SEMVDGK-PPGFNMDRNGNPVGLRADSNGVGXXXXXXXXXXXXXXXHEGEDGA--TLYPW 194
S ++ K PP +G P G D GVG G G +YPW
Sbjct: 10 SNYIEPKFPPFEEFAPHGGPGG--GDG-GVGGATTGACTPRPPPPGPAGPKGKEPVVYPW 66
Query: 195 MKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTER 253
MK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ER
Sbjct: 67 MKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSER 126
Query: 254 QIKIWFQNRRMKLKKEVLRPN 274
Q+KIWFQNRRMK KK+ PN
Sbjct: 127 QVKIWFQNRRMKWKKDHKLPN 147
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 57/111 (51%), Positives = 71/111 (63%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 201 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 260
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAYSAALP 300
L+ERQ+KIWFQNRRMK KK+ PN + A P P + P
Sbjct: 261 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGPPGKPQTQSPHP 311
>UNIPROTKB|F1SHT3 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 KO:K09306 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:CU570959 RefSeq:XP_003134887.1
Ensembl:ENSSSCT00000018183 GeneID:100519284 KEGG:ssc:100519284
Uniprot:F1SHT3
Length = 233
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 126 EGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 184
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 185 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQPSGEDAEA 229
>MGI|MGI:96178 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96178 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 HOVERGEN:HBG016849 CTD:3203
KO:K09306 eggNOG:NOG305812 OMA:PEQQYKS OrthoDB:EOG4C5CKB
EMBL:AF247663 EMBL:M11988 IPI:IPI00132603 PIR:A24779
RefSeq:NP_034584.1 UniGene:Mm.222030 ProteinModelPortal:P09092
SMR:P09092 STRING:P09092 PhosphoSite:P09092 PRIDE:P09092
Ensembl:ENSMUST00000062829 GeneID:15403 KEGG:mmu:15403
InParanoid:P09092 NextBio:288106 Bgee:P09092 CleanEx:MM_HOXA6
Genevestigator:P09092 GermOnline:ENSMUSG00000043219 Uniprot:P09092
Length = 232
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 125 EGTDRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 183
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 184 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQASGEDSEA 228
>ZFIN|ZDB-GENE-990415-113 [details] [associations]
symbol:hoxc6a "homeo box C6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
Uniprot:P15862
Length = 231
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 58/98 (59%), Positives = 69/98 (70%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 123 IYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 181
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAP 288
TERQIKIWFQNRRMK KKE N++ST E P
Sbjct: 182 TERQIKIWFQNRRMKWKKET---NLTSTVPGTESAGTP 216
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 119 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 169
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 170 TERQIKIWFQNRRMKWKKE 188
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 56/104 (53%), Positives = 69/104 (66%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 127 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 186
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMP 293
L+ERQ+KIWFQNRRMK KK+ PN + A P P
Sbjct: 187 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSGSASAGPPGKP 230
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHKLPN 225
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 56/104 (53%), Positives = 69/104 (66%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 193 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 252
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMP 293
L+ERQ+KIWFQNRRMK KK+ PN + A P P
Sbjct: 253 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSGSASAGPPGKP 296
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHKLPN 225
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 148 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 207
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 208 LSERQIKIWFQNRRMKWKKDHKLPN 232
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 119 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 169
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 170 TERQIKIWFQNRRMKWKKE 188
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/100 (55%), Positives = 68/100 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 191 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 250
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
L+ERQ+KIWFQNRRMK KK+ PN + A P
Sbjct: 251 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGP 290
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHKLPN 225
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/100 (55%), Positives = 68/100 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 14 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 73
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
L+ERQ+KIWFQNRRMK KK+ PN + A P
Sbjct: 74 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGP 113
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHKLPN 225
>UNIPROTKB|P31267 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 EMBL:AC004080 HOVERGEN:HBG016849
CTD:3203 KO:K09306 EMBL:BC069497 EMBL:BC104915 EMBL:BC104917
IPI:IPI00010742 PIR:S15538 RefSeq:NP_076919.1 UniGene:Hs.679517
ProteinModelPortal:P31267 SMR:P31267 STRING:P31267
PhosphoSite:P31267 DMDM:17378385 PRIDE:P31267 DNASU:3203
Ensembl:ENST00000222728 GeneID:3203 KEGG:hsa:3203 UCSC:uc003syo.2
GeneCards:GC07M027185 HGNC:HGNC:5107 HPA:HPA004203 MIM:142951
neXtProt:NX_P31267 PharmGKB:PA29384 eggNOG:NOG305812
InParanoid:P31267 OMA:PEQQYKS OrthoDB:EOG4C5CKB PhylomeDB:P31267
GenomeRNAi:3203 NextBio:12744 Bgee:P31267 CleanEx:HS_HOXA6
Genevestigator:P31267 GermOnline:ENSG00000106006 Uniprot:P31267
Length = 233
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 61/107 (57%), Positives = 74/107 (69%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 126 EGADRKYTSPVYPWMQRMNSCA-GAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 184
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEA 287
RIEIA+ L LTERQIKIWFQNRRMK KKE I+ST E EA
Sbjct: 185 RIEIANALCLTERQIKIWFQNRRMKWKKE--NKLINSTQPSGEDSEA 229
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 119 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 169
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 170 TERQIKIWFQNRRMKWKKE 188
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/100 (55%), Positives = 68/100 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 194 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 253
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPP 289
L+ERQ+KIWFQNRRMK KK+ PN + A P
Sbjct: 254 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGP 293
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 141 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 200
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 201 LSERQIKIWFQNRRMKWKKDHKLPN 225
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 119 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 169
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 170 TERQIKIWFQNRRMKWKKE 188
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+S+ G KR RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 119 IYPWMRSS---------GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 169
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQIKIWFQNRRMK KKE
Sbjct: 170 TERQIKIWFQNRRMKWKKE 188
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 140 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 199
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 200 LSERQIKIWFQNRRMKWKKDHKLPN 224
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWM+ H ++ + GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 140 VYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALC 199
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 200 LSERQIKIWFQNRRMKWKKDHKLPN 224
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/85 (64%), Positives = 63/85 (74%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H S GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L
Sbjct: 130 VYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLC 189
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 190 LSERQIKIWFQNRRMKWKKDHKLPN 214
>UNIPROTKB|E1BQ67 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
Uniprot:E1BQ67
Length = 258
Score = 251 (93.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 47/63 (74%), Positives = 55/63 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK
Sbjct: 186 TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKW 245
Query: 267 KKE 269
KK+
Sbjct: 246 KKD 248
Score = 40 (19.1 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 84 YDNFLDHNTMNYNHMNAFNQFHMKSNPNHT 113
Y N D+ +NY ++ N + S+ H+
Sbjct: 13 YPNGPDYQLLNYGTSSSMNGSYRDSSTMHS 42
>UNIPROTKB|E1BZJ6 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
Uniprot:E1BZJ6
Length = 265
Score = 251 (93.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 47/63 (74%), Positives = 55/63 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK
Sbjct: 186 TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKW 245
Query: 267 KKE 269
KK+
Sbjct: 246 KKD 248
Score = 40 (19.1 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 84 YDNFLDHNTMNYNHMNAFNQFHMKSNPNHT 113
Y N D+ +NY ++ N + S+ H+
Sbjct: 13 YPNGPDYQLLNYGTSSSMNGSYRDSSTMHS 42
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 188 VYPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 247
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 248 LSERQVKIWFQNRRMKWKKDHKLPN 272
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 188 VYPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 247
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 248 LSERQVKIWFQNRRMKWKKDHKLPN 272
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGN-KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
+YPWMK H ++ + GG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L
Sbjct: 159 VYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 218
Query: 250 LTERQIKIWFQNRRMKLKKEVLRPN 274
L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 219 LSERQVKIWFQNRRMKWKKDHKLPN 243
>UNIPROTKB|F1MEU5 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
NextBio:20807136 Uniprot:F1MEU5
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>UNIPROTKB|E2QSK8 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
NextBio:20860262 Uniprot:E2QSK8
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>UNIPROTKB|P09630 [details] [associations]
symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>UNIPROTKB|I3L9Q6 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
Uniprot:I3L9Q6
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>MGI|MGI:96197 [details] [associations]
symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
CleanEx:MM_HOXC6 Genevestigator:P10629
GermOnline:ENSMUSG00000001661 Uniprot:P10629
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>UNIPROTKB|G3V841 [details] [associations]
symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
Uniprot:G3V841
Length = 235
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S G +R RQ YSRYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 122 IYPWMQRMNSHS-GVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISST 278
TERQIKIWFQNRRMK KKE N++ST
Sbjct: 181 TERQIKIWFQNRRMKWKKE---SNLTST 205
>ZFIN|ZDB-GENE-000823-7 [details] [associations]
symbol:hoxb6b "homeo box B6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
Length = 224
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 55/94 (58%), Positives = 71/94 (75%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ + S + G +R RQTY+R+QTLELEKEFH+N+YL+R+RRIEI+H L L
Sbjct: 129 VYPWMQRMN--SCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCL 186
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEK 284
TERQIKIWFQNRRMK KKE ++S + DE+
Sbjct: 187 TERQIKIWFQNRRMKWKKE--NKAVNSAKVSDEE 218
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 247 (92.0 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 46/60 (76%), Positives = 53/60 (88%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G +R RQTYSR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 265 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 324
Score = 42 (19.8 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 46 KSEPNPCQYEDRDARYFEKDAKYFAK 71
K E N C Y D+ + D + +
Sbjct: 107 KEESNCCMYSDKRTKLISSDVPSYQR 132
>UNIPROTKB|E2QT43 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW CTD:3215
EMBL:AAEX03006516 RefSeq:XP_003435305.1 SMR:E2QT43
Ensembl:ENSCAFT00000026675 GeneID:100686000 KEGG:cfa:100686000
Uniprot:E2QT43
Length = 269
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 262
>UNIPROTKB|P09067 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 GO:GO:0045446 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 PIR:A24777 EMBL:AF287967 OMA:APQIFPW
OrthoDB:EOG45MN66 EMBL:M92299 EMBL:AK314964 EMBL:BC117247
EMBL:X03794 EMBL:K02572 EMBL:M86726 IPI:IPI00012514 PIR:A45578
RefSeq:NP_002138.1 UniGene:Hs.654456 ProteinModelPortal:P09067
SMR:P09067 IntAct:P09067 STRING:P09067 PhosphoSite:P09067
DMDM:400000 PRIDE:P09067 Ensembl:ENST00000239151 GeneID:3215
KEGG:hsa:3215 UCSC:uc002inr.3 CTD:3215 GeneCards:GC17M046668
HGNC:HGNC:5116 MIM:142960 neXtProt:NX_P09067 PharmGKB:PA29392
InParanoid:P09067 PhylomeDB:P09067 GenomeRNAi:3215 NextBio:12792
Bgee:P09067 CleanEx:HS_HOXB5 Genevestigator:P09067
GermOnline:ENSG00000120075 Uniprot:P09067
Length = 269
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 262
>UNIPROTKB|F1RWG0 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW EMBL:CU856160
RefSeq:XP_003131598.1 ProteinModelPortal:F1RWG0 SMR:F1RWG0
Ensembl:ENSSSCT00000019094 GeneID:100522700 KEGG:ssc:100522700
Uniprot:F1RWG0
Length = 269
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 262
>MGI|MGI:96186 [details] [associations]
symbol:Hoxb5 "homeobox B5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96186 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 OMA:APQIFPW OrthoDB:EOG45MN66
CTD:3215 EMBL:M26283 EMBL:AK133512 EMBL:BC103595 EMBL:BC103596
EMBL:BC103604 EMBL:BC103607 EMBL:L36070 EMBL:X03033 IPI:IPI00132538
PIR:A43551 PIR:B24777 RefSeq:NP_032294.2 UniGene:Mm.207
ProteinModelPortal:P09079 SMR:P09079 STRING:P09079
PhosphoSite:P09079 PRIDE:P09079 Ensembl:ENSMUST00000049272
GeneID:15413 KEGG:mmu:15413 InParanoid:P09079 NextBio:288138
Bgee:P09079 CleanEx:MM_HOXB5 Genevestigator:P09079
GermOnline:ENSMUSG00000038700 Uniprot:P09079
Length = 269
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 262
>RGD|1562292 [details] [associations]
symbol:Hoxb5 "homeo box B5" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1562292
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 EMBL:CH473948 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW
OrthoDB:EOG45MN66 CTD:3215 IPI:IPI00368860 RefSeq:NP_001178854.1
UniGene:Rn.229521 SMR:D3ZMA1 Ensembl:ENSRNOT00000010724
GeneID:497987 KEGG:rno:497987 UCSC:RGD:1562292 NextBio:698308
Uniprot:D3ZMA1
Length = 269
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
AH L L+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLAT 262
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 55/87 (63%), Positives = 65/87 (74%)
Query: 189 ATLYPWMKSNHDASYSCK-TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHE 247
A +YPWMK H + + TG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH
Sbjct: 143 AVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 202
Query: 248 LQLTERQIKIWFQNRRMKLKKEVLRPN 274
L L+ERQIKIWFQNRRMK KK+ PN
Sbjct: 203 LCLSERQIKIWFQNRRMKWKKDHKLPN 229
>ZFIN|ZDB-GENE-000822-1 [details] [associations]
symbol:hoxc6b "homeo box C6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
Bgee:F1RAL1 Uniprot:F1RAL1
Length = 228
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 54/86 (62%), Positives = 64/86 (74%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E + +YPWM+ + S G +R RQ YSRYQTLELEKEFHYN+YL+R+RRIE
Sbjct: 110 EPKGSVQIYPWMQRMNSHS-GVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIE 168
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
IA+ L L+ERQIKIWFQNRRMK KKE
Sbjct: 169 IANTLCLSERQIKIWFQNRRMKWKKE 194
>ZFIN|ZDB-GENE-000823-4 [details] [associations]
symbol:hoxa4a "homeo box A4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
Bgee:Q9PWL5 Uniprot:Q9PWL5
Length = 245
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 55/88 (62%), Positives = 66/88 (75%)
Query: 191 LYPWMKSNH----DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAH 246
+YPWMK H ASYS GG KRSR Y+R Q LELEKEFH+N+YL+R+RR+EIAH
Sbjct: 126 VYPWMKKVHVNTVTASYS---GGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAH 182
Query: 247 ELQLTERQIKIWFQNRRMKLKKEVLRPN 274
+ L+ERQ+KIWFQNRRMK KK+ PN
Sbjct: 183 TMCLSERQVKIWFQNRRMKWKKDHKLPN 210
>ZFIN|ZDB-GENE-000823-9 [details] [associations]
symbol:hoxa5a "homeo box A5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
Uniprot:Q9YGT6
Length = 265
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/79 (65%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 171 IYPWMRKLH-ISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCL 229
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 230 SERQIKIWFQNRRMKWKKD 248
>ZFIN|ZDB-GENE-980526-70 [details] [associations]
symbol:hoxb5a "homeo box B5a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-70 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 KO:K09305 EMBL:AL645782
EMBL:X12802 EMBL:X68248 EMBL:BC071493 EMBL:DQ060540 EMBL:X07381
IPI:IPI00493376 PIR:S03671 RefSeq:NP_571176.2 UniGene:Dr.35792
ProteinModelPortal:P09014 SMR:P09014 Ensembl:ENSDART00000025449
GeneID:30317 KEGG:dre:30317 CTD:30317 InParanoid:P09014 OMA:APQIFPW
OrthoDB:EOG45MN66 NextBio:20806756 Bgee:P09014 Uniprot:P09014
Length = 275
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ H S+ TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 182 IFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 239
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTT 279
+ERQIKIWFQNRRMK KK+ ++S T
Sbjct: 240 SERQIKIWFQNRRMKWKKDNKLKSMSLAT 268
>UNIPROTKB|Q5YLH5 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG238660 HOVERGEN:HBG016849 EMBL:AY307380
IPI:IPI00598309 RefSeq:NP_001026158.1 RefSeq:XP_003640784.1
UniGene:Gga.22376 ProteinModelPortal:Q5YLH5 SMR:Q5YLH5
GeneID:100857163 GeneID:420630 KEGG:gga:100857163 KEGG:gga:420630
CTD:3203 KO:K09306 NextBio:20823516 Uniprot:Q5YLH5
Length = 231
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + + G +R RQTY+RYQTLELEKEFH+N+YL+R+R
Sbjct: 124 EGTDRKYTSPVYPWMQRMNSCAGTVY-GAHGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 182
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIA+ L LTERQIKIWFQNRRMK KKE
Sbjct: 183 RIEIANALCLTERQIKIWFQNRRMKWKKE 211
>UNIPROTKB|Q6B3N0 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOVERGEN:HBG016849 eggNOG:NOG236516 CTD:3202
KO:K09305 EMBL:AY686640 IPI:IPI00602185 RefSeq:XP_003640747.1
RefSeq:XP_003640753.1 RefSeq:XP_003640770.1 UniGene:Gga.11995
ProteinModelPortal:Q6B3N0 SMR:Q6B3N0 STRING:Q6B3N0 GeneID:100857257
GeneID:100858404 GeneID:100858834 KEGG:gga:100857257
KEGG:gga:100858404 KEGG:gga:100858834 Uniprot:Q6B3N0
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>UNIPROTKB|Q2HJ67 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677
EMBL:BC113284 IPI:IPI00711374 RefSeq:NP_001070566.1
UniGene:Bt.11342 ProteinModelPortal:Q2HJ67 SMR:Q2HJ67 PRIDE:Q2HJ67
Ensembl:ENSBTAT00000016196 GeneID:768039 KEGG:bta:768039 CTD:3202
InParanoid:Q2HJ67 KO:K09305 NextBio:20918394 GO:GO:0060435
GO:GO:0060764 GO:GO:0060480 GO:GO:0060638 GO:GO:0060535
Uniprot:Q2HJ67
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>UNIPROTKB|E2R5W8 [details] [associations]
symbol:HOXA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764
"cell-cell signaling involved in mammary gland development"
evidence=IEA] [GO:0060749 "mammary gland alveolus development"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0060638 "mesenchymal-epithelial
cell signaling" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0060535 "trachea cartilage
morphogenesis" evidence=IEA] [GO:0060484 "lung-associated
mesenchyme development" evidence=IEA] [GO:0060480 "lung goblet cell
differentiation" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060435
"bronchiole development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0045639 "positive regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0033599
"regulation of mammary gland epithelial cell proliferation"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:AAEX03009390 RefSeq:XP_539487.2
ProteinModelPortal:E2R5W8 SMR:E2R5W8 PRIDE:E2R5W8
Ensembl:ENSCAFT00000004723 GeneID:482370 KEGG:cfa:482370
NextBio:20856983 Uniprot:E2R5W8
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>UNIPROTKB|P20719 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003016 "respiratory system process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0060480 "lung
goblet cell differentiation" evidence=IEA] [GO:0060484
"lung-associated mesenchyme development" evidence=IEA] [GO:0060535
"trachea cartilage morphogenesis" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0060638
"mesenchymal-epithelial cell signaling" evidence=IEA] [GO:0060644
"mammary gland epithelial cell differentiation" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060764 "cell-cell signaling involved in mammary gland
development" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IDA] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0045639 "positive regulation of myeloid
cell differentiation" evidence=IDA] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0003677 EMBL:CH471073 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 EMBL:AC004080 GO:GO:0045639 GO:GO:0045647
GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M26679 EMBL:BT009744 EMBL:CR542256 EMBL:BC013682
IPI:IPI00302291 PIR:A24777 PIR:A32799 RefSeq:NP_061975.2
UniGene:Hs.655218 ProteinModelPortal:P20719 SMR:P20719
STRING:P20719 PhosphoSite:P20719 DMDM:52788238 PRIDE:P20719
DNASU:3202 Ensembl:ENST00000222726 GeneID:3202 KEGG:hsa:3202
UCSC:uc003syn.2 GeneCards:GC07M027180 H-InvDB:HIX0201165
HGNC:HGNC:5106 HPA:CAB032627 HPA:HPA029319 MIM:142952
neXtProt:NX_P20719 PharmGKB:PA29383 InParanoid:P20719
PhylomeDB:P20719 GenomeRNAi:3202 NextBio:12740 Bgee:P20719
CleanEx:HS_HOXA5 Genevestigator:P20719 GermOnline:ENSG00000106004
Uniprot:P20719
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>UNIPROTKB|E1U314 [details] [associations]
symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>MGI|MGI:96177 [details] [associations]
symbol:Hoxa5 "homeobox A5" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=ISO] [GO:0016477 "cell
migration" evidence=IMP] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISO] [GO:0030324 "lung development"
evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
[GO:0033599 "regulation of mammary gland epithelial cell
proliferation" evidence=IMP] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045647 "negative regulation of
erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048286 "lung alveolus development"
evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] [GO:0060435 "bronchiole development" evidence=IMP]
[GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060480 "lung goblet cell differentiation"
evidence=IMP] [GO:0060481 "lobar bronchus epithelium development"
evidence=IMP] [GO:0060484 "lung-associated mesenchyme development"
evidence=IMP] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IMP] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
[GO:0060574 "intestinal epithelial cell maturation" evidence=IMP]
[GO:0060638 "mesenchymal-epithelial cell signaling" evidence=IMP]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IMP] [GO:0060749 "mammary gland alveolus development"
evidence=IMP] [GO:0060764 "cell-cell signaling involved in mammary
gland development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96177
GO:GO:0005634 GO:GO:0016477 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M36604 EMBL:Y00208 EMBL:X16840 EMBL:M28021
EMBL:BC011063 IPI:IPI00132371 PIR:S07812 RefSeq:NP_034583.1
UniGene:Mm.173 ProteinModelPortal:P09021 SMR:P09021 IntAct:P09021
STRING:P09021 PhosphoSite:P09021 PaxDb:P09021 PRIDE:P09021
Ensembl:ENSMUST00000048794 GeneID:15402 KEGG:mmu:15402
UCSC:uc009byh.1 InParanoid:P09021 NextBio:288102 Bgee:P09021
CleanEx:MM_HOXA5 Genevestigator:P09021
GermOnline:ENSMUSG00000038253 Uniprot:P09021
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>RGD|6492497 [details] [associations]
symbol:LOC100911546 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>RGD|6502805 [details] [associations]
symbol:LOC100909641 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 176 IYPWMRKLH-ISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 235 SERQIKIWFQNRRMKWKKD 253
>RGD|620609 [details] [associations]
symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 155 IYPWMRKLH-ISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 213
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 214 SERQIKIWFQNRRMKWKKD 232
>UNIPROTKB|P52949 [details] [associations]
symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM+ H S+ G KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L
Sbjct: 155 IYPWMRKLH-ISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 213
Query: 251 TERQIKIWFQNRRMKLKKE 269
+ERQIKIWFQNRRMK KK+
Sbjct: 214 SERQIKIWFQNRRMKWKKD 232
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/96 (57%), Positives = 67/96 (69%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRP--------QAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 221
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/96 (57%), Positives = 67/96 (69%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRP--------QAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 221
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/96 (57%), Positives = 67/96 (69%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRP--------QAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 221
>UNIPROTKB|H9L183 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0030099 "myeloid cell differentiation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 OMA:WMRSSGT
EMBL:AADN02027109 EMBL:AADN02027110 Ensembl:ENSGALT00000029852
Uniprot:H9L183
Length = 217
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L LTERQIKIWFQNRRMK K
Sbjct: 134 GTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193
Query: 268 KE 269
KE
Sbjct: 194 KE 195
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/84 (64%), Positives = 60/84 (71%)
Query: 188 GATLYPWMKSNHDASYSCKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIA 245
G +YPWM H TGG G KR R Y+R Q LELEKEFH +KYL+RKRRIE+A
Sbjct: 145 GGAVYPWMTRVHST-----TGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVA 199
Query: 246 HELQLTERQIKIWFQNRRMKLKKE 269
H L LTERQ+KIWFQNRRMK KKE
Sbjct: 200 HSLMLTERQVKIWFQNRRMKHKKE 223
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/96 (56%), Positives = 67/96 (69%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ + G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRP--------QVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 185
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E++E
Sbjct: 186 TERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEQIE 221
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/96 (57%), Positives = 66/96 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 133 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 183
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 184 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 219
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/96 (57%), Positives = 66/96 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 220
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/96 (57%), Positives = 66/96 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 134 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 185 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 220
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/96 (57%), Positives = 66/96 (68%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 149 LFPWMRPQ---------AAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 199
Query: 251 TERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
TERQ+KIWFQNRRMK KKE + S+ E+LE
Sbjct: 200 TERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELE 235
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 54/81 (66%), Positives = 60/81 (74%)
Query: 190 TLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
T YPWM G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L
Sbjct: 145 TFYPWMAI-------AGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 197
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 198 LTERQIKIWFQNRRMKLKKEI 218
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 55/98 (56%), Positives = 67/98 (68%)
Query: 189 ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
A L+PWM+ G +R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L
Sbjct: 132 AQLFPWMRPQ---------ATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHAL 182
Query: 249 QLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
LTERQ+KIWFQNRRMK KKE + S+ E++E
Sbjct: 183 ALTERQVKIWFQNRRMKWKKEHNKDKFPSSKAEQEEIE 220
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 56/80 (70%), Positives = 60/80 (75%)
Query: 196 KSNHDASYS----CKTGG--GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
K HD S K G KR RQTY+RYQTLELEKEFHYN+YL+R+RRIEIAH L
Sbjct: 46 KETHDVSGPRIGRMKRNGCTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 105
Query: 250 LTERQIKIWFQNRRMKLKKE 269
LTERQIKIWFQNRRMK KKE
Sbjct: 106 LTERQIKIWFQNRRMKWKKE 125
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWMK K GG +KR+RQTYSR QTLELEKEFHY+KYL+RKRR EI+ L L
Sbjct: 103 VFPWMKMG-----GAK-GGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHL 156
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 157 TERQVKIWFQNRRMKHKKE 175
>UNIPROTKB|F1NMG1 [details] [associations]
symbol:F1NMG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
Length = 228
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 184 EGEDG---ATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKR 240
EG D + +YPWM+ + + + G KR+R Y+RYQTLELEKEFH+N+YL+R+R
Sbjct: 124 EGTDRKYTSPVYPWMQRMNSCADNIG-GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRR 182
Query: 241 RIEIAHELQLTERQIKIWFQNRRMKLKKE 269
RIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 183 RIEIAHALCLSERQIKIWFQNRRMKWKKD 211
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 52/81 (64%), Positives = 62/81 (76%)
Query: 194 WMKSNHD----ASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQ 249
WM + D ++ G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L
Sbjct: 117 WMSNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALC 176
Query: 250 LTERQIKIWFQNRRMKLKKEV 270
LTERQIKIWFQNRRMKLKKE+
Sbjct: 177 LTERQIKIWFQNRRMKLKKEL 197
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
+YPWM H S +T G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L
Sbjct: 140 IYPWMTKLH---MSHETDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCL 194
Query: 251 TERQIKIWFQNRRMKLKKE 269
ERQIKIWFQNRRMK KK+
Sbjct: 195 NERQIKIWFQNRRMKWKKD 213
>ZFIN|ZDB-GENE-980526-533 [details] [associations]
symbol:hoxc5a "homeo box C5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
Length = 233
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/130 (44%), Positives = 79/130 (60%)
Query: 140 MVDGKPPGFNMDRNGNPVGLRADSNGVGXXXXXXXXXXXXXXXHEGEDGATLYPWMKSNH 199
++ K G NM+ P G ++ ++ + + + +YPWM H
Sbjct: 102 LLSQKAEG-NMEVMEKPSG-KSRTDDIKMETTSAIKQQTNSTQRQNQSQPQIYPWMTKLH 159
Query: 200 DASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWF 259
S ++ G KRSR +Y+RYQTLELEKEFH+N+YL+R+RRIEIA+ L L ERQIKIWF
Sbjct: 160 ---MSHESDG--KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWF 214
Query: 260 QNRRMKLKKE 269
QNRRMK KK+
Sbjct: 215 QNRRMKWKKD 224
>FB|FBgn0003944 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS;TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0010092 "specification of organ identity" evidence=IMP]
[GO:0007482 "haltere development" evidence=IMP] [GO:0007494 "midgut
development" evidence=TAS] [GO:0007385 "specification of segmental
identity, abdomen" evidence=NAS] [GO:0007384 "specification of
segmental identity, thorax" evidence=IMP;NAS] [GO:0001706 "endoderm
formation" evidence=TAS] [GO:0007507 "heart development"
evidence=IEP;IMP] [GO:0007501 "mesodermal cell fate specification"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0035052 "dorsal vessel aortic cell fate
commitment" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007424 "open tracheal system development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045570 "regulation of imaginal disc growth"
evidence=IMP] [GO:0048636 "positive regulation of muscle organ
development" evidence=IMP] [GO:0001709 "cell fate determination"
evidence=IGI;IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
evidence=IMP] [GO:0060969 "negative regulation of gene silencing"
evidence=IDA] [GO:0042659 "regulation of cell fate specification"
evidence=IMP] [GO:0007525 "somatic muscle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0042694 GO:GO:0048636 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:U31961 GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0005667
GO:GO:0007501 GO:GO:0007494 GO:GO:0000980 GO:GO:0000122
GO:GO:0007480 GO:GO:0007384 GO:GO:0001709 GO:GO:0007424
GO:GO:0045570 GO:GO:0061327 GO:GO:0001706 GO:GO:0010092
GO:GO:0007482 PDB:1B8I PDBsum:1B8I EMBL:X05723 EMBL:X05724
EMBL:X05725 EMBL:X05727 EMBL:X76210 EMBL:BT010241 EMBL:K01963
EMBL:K01959 EMBL:X05427 PIR:B27867 PIR:D26995 RefSeq:NP_536748.1
RefSeq:NP_536752.1 RefSeq:NP_732171.1 RefSeq:NP_732172.1
RefSeq:NP_732173.1 RefSeq:NP_996219.1 UniGene:Dm.21668
ProteinModelPortal:P83949 SMR:P83949 DIP:DIP-33048N IntAct:P83949
MINT:MINT-86744 STRING:P83949 PaxDb:P83949 PRIDE:P83949
EnsemblMetazoa:FBtr0083347 GeneID:42034 KEGG:dme:Dmel_CG10388
CTD:42034 FlyBase:FBgn0003944 eggNOG:NOG252841 InParanoid:P83949
OMA:WMAIAGK PhylomeDB:P83949 ChiTaRS:Ubx EvolutionaryTrace:P83949
GenomeRNAi:42034 NextBio:826845 Bgee:P83949 GermOnline:CG10388
GO:GO:0035052 GO:GO:0060969 Uniprot:P83949
Length = 389
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKL
Sbjct: 291 TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 350
Query: 267 KKEV 270
KKE+
Sbjct: 351 KKEI 354
>UNIPROTKB|P20822 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CM000070 GenomeReviews:CM000070_GR eggNOG:NOG252841
EMBL:X05179 EMBL:U03179 PIR:A29259 RefSeq:XP_001359066.2
GeneID:4802074 KEGG:dpo:Dpse_GA10294 FlyBase:FBgn0243536
InParanoid:P20822 Uniprot:P20822
Length = 385
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKL
Sbjct: 286 TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 345
Query: 267 KKEV 270
KKE+
Sbjct: 346 KKEI 349
>UNIPROTKB|P83950 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:7240
"Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AF099983 EMBL:AF099980 EMBL:AF099981 EMBL:AF099982
ProteinModelPortal:P83950 SMR:P83950 FlyBase:FBgn0014820
Uniprot:P83950
Length = 389
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKL
Sbjct: 291 TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 350
Query: 267 KKEV 270
KKE+
Sbjct: 351 KKEI 354
>UNIPROTKB|Q6VPU7 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7244 "Drosophila
virilis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 FlyBase:FBgn0013100 EMBL:AY333070 HSSP:P83949
ProteinModelPortal:Q6VPU7 SMR:Q6VPU7 STRING:Q6VPU7
InParanoid:Q6VPU7 Uniprot:Q6VPU7
Length = 387
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T G +R RQTY+RYQTLELEKEFH N YL+R+RRIE+AH L LTERQIKIWFQNRRMKL
Sbjct: 288 TNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 347
Query: 267 KKEV 270
KKE+
Sbjct: 348 KKEI 351
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 53/78 (67%), Positives = 63/78 (80%)
Query: 209 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
G +R RQTY+RYQTLELEKEFH+N+YL+R+RRIEIAH L LTERQIKIWFQNRRMK KK
Sbjct: 5 GPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 64
Query: 269 EVLRPNISSTTMLDEKLE 286
E +SS+ + E+ E
Sbjct: 65 E--NKLLSSSQLSAEEEE 80
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/86 (60%), Positives = 63/86 (73%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GG KRSR Y+R Q LELEKEFHYN+YL+R+RR+EIAH L L+ERQIKIWFQNRRMK
Sbjct: 6 SGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKW 65
Query: 267 KKEVLRPNI---SSTTMLDEKLEAPP 289
KK+ PN S+ + L+ PP
Sbjct: 66 KKDHKLPNTKIRSNPSSSSASLQIPP 91
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 49/63 (77%), Positives = 56/63 (88%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLK
Sbjct: 40 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 99
Query: 268 KEV 270
KE+
Sbjct: 100 KEL 102
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 49/63 (77%), Positives = 56/63 (88%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G +R RQTY+R+QTLELEKEFH+N YL+R+RRIEIAH L LTERQIKIWFQNRRMKLK
Sbjct: 18 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 77
Query: 268 KEV 270
KE+
Sbjct: 78 KEL 80
>UNIPROTKB|G3MYX4 [details] [associations]
symbol:G3MYX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 OMA:APQIFPW EMBL:DAAA02049063
Ensembl:ENSBTAT00000065146 Uniprot:G3MYX4
Length = 251
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 187 DGAT--LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
+G T ++PWM+ H S+ TG KR+R Y+RYQTLELEKE H+N+YL+R+ RIEI
Sbjct: 170 EGQTPQIFPWMRKLH-ISHDM-TGPDGKRARTAYTRYQTLELEKELHFNRYLTRRWRIEI 227
Query: 245 AHELQLTERQIKIWFQNRRMKLKK 268
AH L L+ERQIKIWFQNRRMK KK
Sbjct: 228 AHALCLSERQIKIWFQNRRMKWKK 251
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ A ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 55 NQSSSPAQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 106
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 107 EVSHALGLTERQVKIWFQNRRMKWKKE 133
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ A ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 35 NQSSSPAQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 86
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 87 EVSHALGLTERQVKIWFQNRRMKWKKE 113
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ A ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 75 NQSSSPAQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 126
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 127 EVSHALGLTERQVKIWFQNRRMKWKKE 153
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G KR RQTY+RYQTLELEKEFH+N+YL+R+R +EIAH L LTERQIKIWFQNRRMK K
Sbjct: 2 GPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
Query: 268 KE 269
KE
Sbjct: 62 KE 63
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G KR RQTY+RYQTLELEKEFH+N+YL+R+R +EIAH L LTERQIKIWFQNRRMK K
Sbjct: 2 GPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
Query: 268 KE 269
KE
Sbjct: 62 KE 63
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 86 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 137
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 138 EVSHALALTERQVKIWFQNRRMKWKKE 164
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 73 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 124
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 125 EVSHALALTERQVKIWFQNRRMKWKKE 151
>UNIPROTKB|P13378 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705 EMBL:AC009336
HOVERGEN:HBG016849 eggNOG:NOG314669 KO:K09308 CTD:3234
EMBL:AY014304 EMBL:AY014303 EMBL:AL520835 EMBL:BC038709
EMBL:BC090853 EMBL:X15507 IPI:IPI00008481 IPI:IPI00916034
IPI:IPI01018181 PIR:B32830 RefSeq:NP_001186675.1 RefSeq:NP_062458.1
UniGene:Hs.301963 ProteinModelPortal:P13378 SMR:P13378
MINT:MINT-7032137 STRING:P13378 PhosphoSite:P13378 DMDM:13124737
PRIDE:P13378 Ensembl:ENST00000313173 Ensembl:ENST00000429017
Ensembl:ENST00000450510 Ensembl:ENST00000544999 GeneID:3234
KEGG:hsa:3234 UCSC:uc002uko.3 GeneCards:GC02P176958 HGNC:HGNC:5139
MIM:142985 neXtProt:NX_P13378 PharmGKB:PA29413 InParanoid:P13378
OMA:GQEYFHP GenomeRNAi:3234 NextBio:12869 ArrayExpress:P13378
Bgee:P13378 CleanEx:HS_HOXD8 Genevestigator:P13378
GermOnline:ENSG00000175879 Uniprot:P13378
Length = 290
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 177 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 228
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 229 EVSHALALTERQVKIWFQNRRMKWKKE 255
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 108 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 159
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 160 EVSHALALTERQVKIWFQNRRMKWKKE 186
>MGI|MGI:96209 [details] [associations]
symbol:Hoxd8 "homeobox D8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96209
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705
HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332 eggNOG:NOG314669
OrthoDB:EOG4H464V KO:K09308 EMBL:AL928644 CTD:3234 OMA:GQEYFHP
EMBL:X56561 EMBL:M87803 IPI:IPI00828631 PIR:A43562 PIR:S16177
RefSeq:NP_032302.2 UniGene:Mm.280673 ProteinModelPortal:P23463
STRING:P23463 PhosphoSite:P23463 PRIDE:P23463
Ensembl:ENSMUST00000019749 GeneID:15437 KEGG:mmu:15437
InParanoid:P23463 NextBio:288214 CleanEx:MM_HOXD8
Genevestigator:P23463 GermOnline:ENSMUSG00000027102 Uniprot:P23463
Length = 289
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 175 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 226
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 227 EVSHTLALTERQVKIWFQNRRMKWKKE 253
>UNIPROTKB|F1LWY9 [details] [associations]
symbol:F1LWY9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
Length = 181
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G +R RQTYSR+QTLELEKEF +N YL+RKRRI
Sbjct: 68 NQSSSPSQMFPWMRP--------QAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRI 119
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 120 EVSHTLALTERQVKIWFQNRRMKWKKE 146
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/75 (66%), Positives = 59/75 (78%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVL 271
+R RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 12 QRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENN 71
Query: 272 RPNISSTTMLDEKLE 286
+ S+ E+LE
Sbjct: 72 KDKFPSSKCEQEELE 86
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 49/68 (72%), Positives = 56/68 (82%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
TGG KRSR Y+R Q LELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK
Sbjct: 147 TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKW 206
Query: 267 KKEVLRPN 274
KK+ PN
Sbjct: 207 KKDHKLPN 214
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 47/63 (74%), Positives = 55/63 (87%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
TG KR+R Y+RYQTLELEKEFH+N+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK
Sbjct: 3 TGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKW 62
Query: 267 KKE 269
KK+
Sbjct: 63 KKD 65
>ZFIN|ZDB-GENE-990415-114 [details] [associations]
symbol:hoxc8a "homeo box C8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IGI] [GO:0031017
"exocrine pancreas development" evidence=IGI] [GO:0031018
"endocrine pancreas development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-114
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HSSP:P02833 HOGENOM:HOG000231181 GO:GO:0031018 GO:GO:0035118
GO:GO:0031017 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 EMBL:BX005254
EMBL:BC080255 EMBL:DQ060555 EMBL:Y14544 IPI:IPI00489401
RefSeq:NP_001005771.1 UniGene:Dr.132201 ProteinModelPortal:Q68EH7
SMR:Q68EH7 STRING:Q68EH7 Ensembl:ENSDART00000103139 GeneID:449648
KEGG:dre:449648 CTD:449648 InParanoid:A2BE64 OMA:HHGTSSI
NextBio:20832749 Bgee:Q68EH7 Uniprot:Q68EH7
Length = 250
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 49/79 (62%), Positives = 59/79 (74%)
Query: 191 LYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L L
Sbjct: 138 MFPWMRPH---------APGRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSL 188
Query: 251 TERQIKIWFQNRRMKLKKE 269
TERQ+KIWFQNRRMK KKE
Sbjct: 189 TERQVKIWFQNRRMKWKKE 207
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
E++H L LTERQ+KIWFQNRRMK KKE + + +EK+E
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARD-EEKVE 223
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
E++H L LTERQ+KIWFQNRRMK KKE + + +EK+E
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARD-EEKVE 223
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
E++H L LTERQ+KIWFQNRRMK KKE + + +EK+E
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARD-EEKVE 223
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
E++H L LTERQ+KIWFQNRRMK KKE + + +EK+E
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARD-EEKVE 223
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLE 286
E++H L LTERQ+KIWFQNRRMK KKE + + +EK+E
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARD-EEKVE 223
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 49/87 (56%), Positives = 62/87 (71%)
Query: 183 HEGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
++ + ++PWM+ + G + RQTYSRYQTLELEKEF +N YL+RKRRI
Sbjct: 130 NQNSSPSLMFPWMRPH---------APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKE 207
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 46/60 (76%), Positives = 53/60 (88%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G +R RQTYSR+QTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 241 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 300
>UNIPROTKB|J9PB70 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000049459 Uniprot:J9PB70
Length = 332
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 52/85 (61%), Positives = 59/85 (69%)
Query: 185 GEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEI 244
GE G P S S+ G + RQTYSRYQTLELEKEF +N YL+RKRRIE+
Sbjct: 240 GEAGGAAEPRGPSR--PSWHFLWAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEV 297
Query: 245 AHELQLTERQIKIWFQNRRMKLKKE 269
+H L LTERQ+KIWFQNRRMK KKE
Sbjct: 298 SHALGLTERQVKIWFQNRRMKWKKE 322
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 73
Query: 270 VLRPNISSTTMLDEKLE 286
+ + +EK+E
Sbjct: 74 NNKDKLPGARD-EEKVE 89
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G + RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 14 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 73
Query: 270 VLRPNISSTTMLDEKLE 286
+ + +EK+E
Sbjct: 74 NNKDKLPGARD-EEKVE 89
>RGD|62387 [details] [associations]
symbol:Pdx1 "pancreatic and duodenal homeobox 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0003309 "type B pancreatic cell differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IEA;ISO] [GO:0007417 "central nervous system
development" evidence=IEP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP;IMP] [GO:0010040 "response to iron(II) ion"
evidence=IEP] [GO:0010157 "response to chlorate" evidence=IEP]
[GO:0010260 "organ senescence" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IMP] [GO:0014070 "response to
organic cyclic compound" evidence=IEP] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA;ISO] [GO:0030073 "insulin
secretion" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO;IMP] [GO:0031016 "pancreas development"
evidence=IEP;ISO] [GO:0031017 "exocrine pancreas development"
evidence=IEA;ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031667 "response to nutrient levels" evidence=IEP] [GO:0032024
"positive regulation of insulin secretion" evidence=IMP] [GO:0032403
"protein complex binding" evidence=IDA;IPI] [GO:0033273 "response to
vitamin" evidence=IEP] [GO:0033993 "response to lipid" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP]
[GO:0035094 "response to nicotine" evidence=IEP] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042593 "glucose homeostasis"
evidence=ISO;IMP] [GO:0043201 "response to leucine" evidence=IEP]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0043388
"positive regulation of DNA binding" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA;IMP] [GO:0046982
"protein heterodimerization activity" evidence=IDA] [GO:0048565
"digestive tract development" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP;IMP] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051594 "detection of
glucose" evidence=IDA] [GO:0060290 "transdifferentiation"
evidence=IEP] [GO:0070542 "response to fatty acid" evidence=IEP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA
binding transcription factor activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:62387
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0009611 GO:GO:0032403 GO:GO:0042493 GO:GO:0070542
GO:GO:0008284 GO:GO:0031100 GO:GO:0034097 GO:GO:0045944
GO:GO:0048863 GO:GO:0051384 GO:GO:0007417 GO:GO:0032024
GO:GO:0003700 GO:GO:0042593 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0010942
GO:GO:0035094 GO:GO:0046982 GO:GO:0007224 GO:GO:0001046
GO:GO:0043388 GO:GO:0060290 GO:GO:0010260 GO:GO:0003309
GO:GO:0051594 GO:GO:0033273 GO:GO:0043201 GO:GO:0010157 CTD:3651
HOVERGEN:HBG004525 KO:K07594 EMBL:U04833 EMBL:S67435 IPI:IPI00327500
PIR:S42634 RefSeq:NP_074043.3 UniGene:Rn.54603
ProteinModelPortal:P52947 SMR:P52947 MINT:MINT-1894530
PhosphoSite:P52947 GeneID:29535 KEGG:rno:29535 NextBio:609520
Genevestigator:P52947 Uniprot:P52947
Length = 283
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/96 (54%), Positives = 63/96 (65%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 119 FPWMKSTKAHAWKSQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 178
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTT 279
+A L LTER IKIWFQNRRMK KKE + S TT
Sbjct: 179 LAVMLNLTERHIKIWFQNRRMKWKKEEDKKRSSGTT 214
>UNIPROTKB|F6V4P2 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
OMA:NNPVANW EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Uniprot:F6V4P2
Length = 253
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 47/59 (79%), Positives = 53/59 (89%)
Query: 212 KRS-RQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+RS RQTYSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE
Sbjct: 192 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 250
>MGI|MGI:102851 [details] [associations]
symbol:Pdx1 "pancreatic and duodenal homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001889 "liver development" evidence=IMP]
[GO:0003309 "type B pancreatic cell differentiation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006006 "glucose metabolic process" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007224 "smoothened signaling pathway" evidence=ISO]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0009749 "response to
glucose stimulus" evidence=ISO] [GO:0010942 "positive regulation of
cell death" evidence=ISO] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IMP] [GO:0030073 "insulin secretion"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=ISO;IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0031017
"exocrine pancreas development" evidence=IMP] [GO:0031018
"endocrine pancreas development" evidence=IMP] [GO:0032024
"positive regulation of insulin secretion" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=IDA] [GO:0042593
"glucose homeostasis" evidence=ISO;IMP] [GO:0043388 "positive
regulation of DNA binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0048863 "stem cell
differentiation" evidence=ISO] [GO:0051594 "detection of glucose"
evidence=ISO] Reactome:REACT_13641 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:102851 GO:GO:0005829
GO:GO:0008285 GO:GO:0005654 GO:GO:0030154 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0001889 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 Reactome:REACT_127416 GO:GO:0007263 GO:GO:0031018
GO:GO:0016331 GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
GeneTree:ENSGT00700000104446 CTD:3651 eggNOG:NOG271681
HOGENOM:HOG000115484 HOVERGEN:HBG004525 KO:K07594 OMA:PYEVPPI
OrthoDB:EOG4M0F2P EMBL:X74342 EMBL:AK020261 EMBL:BC103572
EMBL:BC103581 EMBL:BC103582 EMBL:BC105642 IPI:IPI00132557
PIR:S39581 RefSeq:NP_032840.1 UniGene:Mm.389714
ProteinModelPortal:P52946 SMR:P52946 MINT:MINT-3982089
STRING:P52946 PhosphoSite:P52946 PRIDE:P52946
Ensembl:ENSMUST00000085591 GeneID:18609 KEGG:mmu:18609
UCSC:uc009any.2 InParanoid:Q3ZB03 NextBio:294534 Bgee:P52946
CleanEx:MM_PDX1 Genevestigator:P52946 GermOnline:ENSMUSG00000029644
Uniprot:P52946
Length = 284
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 51/95 (53%), Positives = 62/95 (65%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 120 FPWMKSTKAHAWKGQWAGGAYTAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 179
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKEVLRPNISST 278
+A L LTER IKIWFQNRRMK KKE + S T
Sbjct: 180 LAVMLNLTERHIKIWFQNRRMKWKKEEDKKRSSGT 214
>ZFIN|ZDB-GENE-990415-121 [details] [associations]
symbol:hoxd9a "homeo box D9a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-121 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AF071268 EMBL:BC056695 EMBL:DQ060566 EMBL:Y14536
IPI:IPI00504959 RefSeq:NP_571201.3 UniGene:Dr.75792
ProteinModelPortal:Q9PWM6 SMR:Q9PWM6 Ensembl:ENSDART00000082354
GeneID:30350 KEGG:dre:30350 CTD:30350 InParanoid:Q9PWM6 OMA:WSSVHPQ
OrthoDB:EOG4MPHRC NextBio:20806778 Bgee:Q9PWM6 Uniprot:Q9PWM6
Length = 262
Score = 209 (78.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF YN YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 196 RKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 252
Score = 39 (18.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 126 NATNFVPKDEAISEMVDGKPPGFN 149
N+++ PKDE + +D P N
Sbjct: 165 NSSHGEPKDEKQQQQLDPSNPAAN 188
>MGI|MGI:96174 [details] [associations]
symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007379 "segment specification" evidence=IMP] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
[GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IGI;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
GermOnline:ENSMUSG00000014704 Uniprot:P31245
Length = 372
Score = 223 (83.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 267 KKE 269
K++
Sbjct: 195 KRQ 197
Score = 39 (18.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 24/97 (24%), Positives = 36/97 (37%)
Query: 106 MKSNPNHTDYLRTNSDK-ETLNATNFVPKDEAISEMVDGKPPGFNMDRNGNPVGLRADSN 164
+ S P D +++S K TL+ + +P + + PG + R+G VG R S+
Sbjct: 22 LTSFPPVADTFQSSSIKTSTLSHSTLIPPP--FEQTIPSLNPGSH-PRHGAGVGGRPKSS 78
Query: 165 GVGXXXXXXXXXXXXXXXHEGEDGATLYPWMKSNHDA 201
G G YPWMK A
Sbjct: 79 PAGSRGSPVPA---------GALQPPEYPWMKEKKAA 106
>UNIPROTKB|E1BBQ5 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0031018
"endocrine pancreas development" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007263 "nitric oxide
mediated signal transduction" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
EMBL:DAAA02033158 IPI:IPI00716405 RefSeq:NP_001179065.1
UniGene:Bt.87929 PRIDE:E1BBQ5 Ensembl:ENSBTAT00000014141
GeneID:538927 KEGG:bta:538927 NextBio:20877667 Uniprot:E1BBQ5
Length = 285
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 121 FPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 180
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWFQNRRMK KKE
Sbjct: 181 LAVMLNLTERHIKIWFQNRRMKWKKE 206
>UNIPROTKB|E2RI92 [details] [associations]
symbol:PDX1 "Pancreatic and duodenum homeobox 1"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0031017 "exocrine pancreas
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007263 "nitric oxide mediated
signal transduction" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008285 GO:GO:0030154
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0007263 GO:GO:0031018 GO:GO:0016331
GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
EMBL:AAEX03014241 EMBL:HQ454506 RefSeq:XP_543155.3
UniGene:Cfa.16232 Ensembl:ENSCAFT00000010866 GeneID:493994
KEGG:cfa:493994 NextBio:20865524 Uniprot:E2RI92
Length = 282
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 118 FPWMKSTKAHAWKGQWAGGAYVAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 177
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWFQNRRMK KKE
Sbjct: 178 LAVMLNLTERHIKIWFQNRRMKWKKE 203
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 218 YSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISS 277
YSRYQTLELEKEF +N YL+RKRRIE++H L LTERQ+KIWFQNRRMK KKE + S
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 61
Query: 278 TTMLDEKLE 286
+ E+LE
Sbjct: 62 SKCEQEELE 70
>UNIPROTKB|P52945 [details] [associations]
symbol:PDX1 "Pancreas/duodenum homeobox protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0007417 "central nervous
system development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010260 "organ senescence" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0032024
"positive regulation of insulin secretion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0033273
"response to vitamin" evidence=IEA] [GO:0034097 "response to
cytokine stimulus" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043201
"response to leucine" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEA] [GO:0060290
"transdifferentiation" evidence=IEA] [GO:0070542 "response to fatty
acid" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006091 "generation of precursor
metabolites and energy" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0031018 "endocrine pancreas
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0007263
"nitric oxide mediated signal transduction" evidence=IDA]
[GO:0030073 "insulin secretion" evidence=IDA] [GO:0051594
"detection of glucose" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003309 "type B pancreatic cell differentiation"
evidence=ISS;IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0008284 EMBL:CH471075 GO:GO:0043565 GO:GO:0045944
GO:GO:0001889 GO:GO:0003700 GO:GO:0003682 GO:GO:0042593
GO:GO:0006006 GO:GO:0006091 Orphanet:552 Orphanet:99885
Pathway_Interaction_DB:hnf3bpathway Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 MIM:125853 GO:GO:0007263 GO:GO:0016331
GO:GO:0048565 GO:GO:0030073 GO:GO:0031017 GO:GO:0003309
GO:GO:0051594 CleanEx:HS_PDX1 EMBL:U35632 EMBL:S82178 EMBL:S82168
EMBL:U30329 EMBL:X99894 EMBL:AF035260 EMBL:AF035259 EMBL:AF049893
EMBL:AL353195 IPI:IPI00006036 PIR:G01926 RefSeq:NP_000200.1
UniGene:Hs.32938 ProteinModelPortal:P52945 SMR:P52945 STRING:P52945
PhosphoSite:P52945 DMDM:1708540 PRIDE:P52945 DNASU:3651
Ensembl:ENST00000381033 GeneID:3651 KEGG:hsa:3651 UCSC:uc001urt.2
CTD:3651 GeneCards:GC13P028494 HGNC:HGNC:6107 HPA:CAB025873
MIM:260370 MIM:600733 MIM:606392 neXtProt:NX_P52945 Orphanet:2805
PharmGKB:PA162399173 eggNOG:NOG271681 HOGENOM:HOG000115484
HOVERGEN:HBG004525 InParanoid:P52945 KO:K07594 OMA:PYEVPPI
OrthoDB:EOG4M0F2P PhylomeDB:P52945 GenomeRNAi:3651 NextBio:14279
Bgee:P52945 Genevestigator:P52945 GermOnline:ENSG00000139515
Uniprot:P52945
Length = 283
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 119 FPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 178
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWFQNRRMK KKE
Sbjct: 179 LAVMLNLTERHIKIWFQNRRMKWKKE 204
>UNIPROTKB|F1RSW4 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
OMA:PYEVPPI EMBL:FP236498 Ensembl:ENSSSCT00000010200
ArrayExpress:F1RSW4 Uniprot:F1RSW4
Length = 284
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 120 FPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 179
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWFQNRRMK KKE
Sbjct: 180 LAVMLNLTERHIKIWFQNRRMKWKKE 205
>FB|FBgn0004054 [details] [associations]
symbol:zen2 "zerknullt-related" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
Uniprot:P09090
Length = 252
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 47/84 (55%), Positives = 60/84 (71%)
Query: 191 LYPWMKSNHDASYSCKTGGG--NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
+YP ++ N +A+ + T +KRSR +S Q +ELE+EFH NKYL+R RRIEI+ L
Sbjct: 21 MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRL 80
Query: 249 QLTERQIKIWFQNRRMKLKKEVLR 272
LTERQ+KIWFQNRRMKLKK R
Sbjct: 81 ALTERQVKIWFQNRRMKLKKSTNR 104
>ZFIN|ZDB-GENE-990415-122 [details] [associations]
symbol:pdx1 "pancreatic and duodenal homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IMP] [GO:0035469 "determination of pancreatic left/right
asymmetry" evidence=IMP] [GO:0031016 "pancreas development"
evidence=IMP] [GO:0071910 "determination of liver left/right
asymmetry" evidence=IMP] [GO:0071907 "determination of digestive
tract left/right asymmetry" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-122 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0031018 GO:GO:0071907 CTD:3651
HOVERGEN:HBG004525 KO:K07594 GO:GO:0035469 GO:GO:0071910
EMBL:BC078192 IPI:IPI00510470 RefSeq:NP_571518.2 UniGene:Dr.75810
ProteinModelPortal:Q6DC85 SMR:Q6DC85 STRING:Q6DC85 DNASU:30721
GeneID:30721 KEGG:dre:30721 InParanoid:Q6DC85 NextBio:20807070
ArrayExpress:Q6DC85 Uniprot:Q6DC85
Length = 246
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 50/87 (57%), Positives = 60/87 (68%)
Query: 192 YPWMKSNHDASYSCK---TGG------GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRI 242
+PWMKS +++ K TG NKR+R Y+R Q LELEKEF +NKY+SR RR+
Sbjct: 109 FPWMKSTKSHTHAWKGQWTGPYMVEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRV 168
Query: 243 EIAHELQLTERQIKIWFQNRRMKLKKE 269
E+A L LTER IKIWFQNRRMK KKE
Sbjct: 169 ELALTLSLTERHIKIWFQNRRMKWKKE 195
>UNIPROTKB|E1C2J1 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0031017 "exocrine
pancreas development" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0042593 GO:GO:0006006 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007263
GO:GO:0030073 GeneTree:ENSGT00700000104446 OMA:PYEVPPI
EMBL:AADN02005194 IPI:IPI00811289 Ensembl:ENSGALT00000036448
Uniprot:E1C2J1
Length = 224
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 48/86 (55%), Positives = 58/86 (67%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+ WMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 114 FAWMKSTKSHAWKGQWAGGSYVVEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 173
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWFQNRRMK KKE
Sbjct: 174 LAVMLNLTERHIKIWFQNRRMKWKKE 199
>MGI|MGI:96207 [details] [associations]
symbol:Hoxd3 "homeobox D3" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IGI] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0051216 "cartilage development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96207 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OrthoDB:EOG4S4PH1
CTD:3232 OMA:PECTMQK EMBL:U03485 EMBL:U03496 EMBL:X73573
EMBL:L24363 EMBL:U56400 EMBL:U56401 EMBL:AK138525 EMBL:M18169
IPI:IPI00132385 PIR:D29585 PIR:S34164 PIR:S47539 RefSeq:NP_034598.2
UniGene:Mm.430708 ProteinModelPortal:P09027 SMR:P09027
STRING:P09027 PhosphoSite:P09027 PRIDE:P09027
Ensembl:ENSMUST00000047830 Ensembl:ENSMUST00000053932
Ensembl:ENSMUST00000111982 Ensembl:ENSMUST00000111983 GeneID:15434
KEGG:mmu:15434 InParanoid:P09027 NextBio:288206 Bgee:P09027
CleanEx:MM_HOXD3 Genevestigator:P09027
GermOnline:ENSMUSG00000042464 Uniprot:P09027
Length = 433
Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/128 (44%), Positives = 71/128 (55%)
Query: 191 LYPWMKSNHDASY---SCKTGGGN-----------KRSRQTYSRYQTLELEKEFHYNKYL 236
++PWMK + S SC T G N KR R Y+ Q +ELEKEFH+N+YL
Sbjct: 161 IFPWMKESRQNSKQKNSCATSGENCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 220
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA-- 294
R RR+E+A+ L LTERQIKIWFQNRRMK KK+ I + +PP+ A
Sbjct: 221 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPPLGGAAGH 280
Query: 295 --YSAALP 300
YS LP
Sbjct: 281 VAYSGQLP 288
>ZFIN|ZDB-GENE-070615-29 [details] [associations]
symbol:cdx1b "caudal type homeobox 1 b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IMP] [GO:0030855 "epithelial cell
differentiation" evidence=IMP] [GO:0050673 "epithelial cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI] [GO:0001706 "endoderm
formation" evidence=IMP] [GO:0001889 "liver development"
evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-070615-29 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0031016 GO:GO:0050673 GO:GO:0000976 GO:GO:0030855
GO:GO:0048546 eggNOG:NOG291290 KO:K09312 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 GO:GO:0001706
EMBL:CABZ01024763 EMBL:CABZ01024764 EMBL:CABZ01095295 EMBL:BC142877
EMBL:AY761094 IPI:IPI00772764 RefSeq:NP_001092232.1
UniGene:Dr.111219 SMR:A5PLE8 STRING:A5PLE8
Ensembl:ENSDART00000081993 GeneID:100004956 KEGG:dre:100004956
CTD:100004956 OMA:YSDFAGY NextBio:20786452 Uniprot:A5PLE8
Length = 255
Score = 195 (73.7 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 45/93 (48%), Positives = 62/93 (66%)
Query: 192 YPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQL 250
Y WM+ S AS KT +K R Y+ +Q LELEKEFHY++Y++ +R+ E+A L L
Sbjct: 127 YDWMRRSVPPASSGGKTRTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKAELATALSL 185
Query: 251 TERQIKIWFQNRRMKL----KKEVLRPNISSTT 279
+ERQ+KIWFQNRR K KK++ +P +STT
Sbjct: 186 SERQVKIWFQNRRAKERKINKKKMQQPQPASTT 218
Score = 45 (20.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYED 56
++ + +PN P N P P P QY D
Sbjct: 9 KDSSMYPNSVRHPSLNLNPQNFVPAPPQYPD 39
>UNIPROTKB|E2RGV4 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:AAEX03017792 RefSeq:XP_545539.2 Ensembl:ENSCAFT00000021350
GeneID:488417 KEGG:cfa:488417 NextBio:20861770 Uniprot:E2RGV4
Length = 431
Score = 229 (85.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/128 (43%), Positives = 71/128 (55%)
Query: 191 LYPWMKSNHDASY---SCKTGG-----------GNKRSRQTYSRYQTLELEKEFHYNKYL 236
++PWMK + S SC T G +KR R Y+ Q +ELEKEFH+N+YL
Sbjct: 159 IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 218
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA-- 294
R RR+E+A+ L LTERQIKIWFQNRRMK KK+ I + +PP+ A
Sbjct: 219 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPPLGSAAGH 278
Query: 295 --YSAALP 300
YS LP
Sbjct: 279 VAYSGQLP 286
>UNIPROTKB|P31249 [details] [associations]
symbol:HOXD3 "Homeobox protein Hox-D3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007160 "cell-matrix adhesion" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 EMBL:AC009336
eggNOG:NOG284589 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 EMBL:D11117
EMBL:Y09980 EMBL:BC005124 EMBL:BC008789 IPI:IPI00215882 PIR:S15548
PIR:S27198 RefSeq:NP_008829.3 UniGene:Hs.93574
ProteinModelPortal:P31249 SMR:P31249 IntAct:P31249 STRING:P31249
PhosphoSite:P31249 DMDM:224471887 PRIDE:P31249 DNASU:3232
Ensembl:ENST00000249440 Ensembl:ENST00000410016
Ensembl:ENST00000468418 GeneID:3232 KEGG:hsa:3232 UCSC:uc002ukt.1
CTD:3232 GeneCards:GC02P177001 HGNC:HGNC:5137 HPA:HPA051831
MIM:142980 neXtProt:NX_P31249 PharmGKB:PA29411 InParanoid:P31249
OMA:PECTMQK PhylomeDB:P31249 GenomeRNAi:3232 NextBio:12861
ArrayExpress:P31249 Bgee:P31249 CleanEx:HS_HOXD3
Genevestigator:P31249 GermOnline:ENSG00000128652 Uniprot:P31249
Length = 432
Score = 229 (85.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/128 (43%), Positives = 71/128 (55%)
Query: 191 LYPWMKSNHDASY---SCKTGG-----------GNKRSRQTYSRYQTLELEKEFHYNKYL 236
++PWMK + S SC T G +KR R Y+ Q +ELEKEFH+N+YL
Sbjct: 160 IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 219
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA-- 294
R RR+E+A+ L LTERQIKIWFQNRRMK KK+ I + +PP+ A
Sbjct: 220 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGH 279
Query: 295 --YSAALP 300
YS LP
Sbjct: 280 VAYSGQLP 287
>UNIPROTKB|H9KZT9 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
OMA:NNPVANW EMBL:AADN02077928 EMBL:AADN02077929
Ensembl:ENSGALT00000019021 Uniprot:H9KZT9
Length = 241
Score = 199 (75.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNR MK+KK
Sbjct: 174 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRGMKMKK 230
Score = 39 (18.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 35 YYEPYNNNCPTKSEP 49
Y+ PY P +EP
Sbjct: 56 YHHPYGPQAPVGAEP 70
>RGD|2319509 [details] [associations]
symbol:Hoxb2 "homeobox B2" species:10116 "Rattus norvegicus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021570 "rhombomere 4 development" evidence=ISO] [GO:0021612
"facial nerve structural organization" evidence=ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048705
"skeletal system morphogenesis" evidence=ISO] [GO:0048857 "neural
nucleus development" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:2319509 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302 CTD:3212 UniGene:Rn.231109
GeneID:100361765 KEGG:rno:100361765 EMBL:DQ399532 IPI:IPI00370818
RefSeq:NP_001040556.1 ProteinModelPortal:Q20A34 SMR:Q20A34
NextBio:651428 Genevestigator:Q20A34 Uniprot:Q20A34
Length = 305
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 51/99 (51%), Positives = 60/99 (60%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 124 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 183
Query: 268 KEVL-RPNISSTTMLDEKLE--APPVFMPAYSAALPKAN 303
++ R LE PV PA S P A+
Sbjct: 184 RQTQHREPPDGEPACPGALEDTGDPVKEPAVSPGGPSAS 222
>ZFIN|ZDB-GENE-980526-532 [details] [associations]
symbol:hoxc3a "homeo box C3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
Length = 254
Score = 197 (74.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 37/59 (62%), Positives = 48/59 (81%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+KR+R ++ Q LELEKEFH++ YL R RR+E+A L+LT+RQIKIWFQNRRMK KK+
Sbjct: 149 SKRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKD 207
Score = 40 (19.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 192 YPWMKSNH 199
YPWM+ H
Sbjct: 112 YPWMRETH 119
>UNIPROTKB|E1B856 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:DAAA02004173 IPI:IPI00709010 RefSeq:XP_002685351.1
RefSeq:XP_002703632.1 UniGene:Bt.105461 Ensembl:ENSBTAT00000006353
GeneID:100295744 KEGG:bta:100295744 Uniprot:E1B856
Length = 434
Score = 227 (85.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 56/128 (43%), Positives = 71/128 (55%)
Query: 191 LYPWMKSNHDASY---SCKTGG-----------GNKRSRQTYSRYQTLELEKEFHYNKYL 236
++PWMK + S SC T G +KR R Y+ Q +ELEKEFH+N+YL
Sbjct: 162 IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 221
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA-- 294
R RR+E+A+ L LTERQIKIWFQNRRMK KK+ I + +PP+ A
Sbjct: 222 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPPLGGAAGH 281
Query: 295 --YSAALP 300
YS LP
Sbjct: 282 VAYSGQLP 289
>UNIPROTKB|E1BZG3 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007160
GO:GO:0010628 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 CTD:3232 OMA:PECTMQK
EMBL:AADN02020018 IPI:IPI00588035 RefSeq:XP_428765.2
Ensembl:ENSGALT00000038692 GeneID:431212 KEGG:gga:431212
NextBio:20830712 Uniprot:E1BZG3
Length = 413
Score = 225 (84.3 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 55/127 (43%), Positives = 71/127 (55%)
Query: 191 LYPWMKSNHDASY----------SCKT----GGGNKRSRQTYSRYQTLELEKEFHYNKYL 236
++PWMK + S SC+ G +KR R Y+ Q +ELEKEFH+N+YL
Sbjct: 144 IFPWMKESRQNSKQKSTCPPSGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 203
Query: 237 SRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPA-- 294
R RR+E+A+ L LTERQIKIWFQNRRMK KK+ I + +PP+ A
Sbjct: 204 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPAGQSPERSPPLSGAAHA 263
Query: 295 -YSAALP 300
YS LP
Sbjct: 264 GYSGQLP 270
>ZFIN|ZDB-GENE-000822-2 [details] [associations]
symbol:hoxc1a "homeo box C1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-2 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 EMBL:AJ306432 EMBL:BX005254
EMBL:DQ060550 EMBL:AF071263 IPI:IPI00507708 RefSeq:NP_571606.1
UniGene:Dr.83047 ProteinModelPortal:Q98SH9 SMR:Q98SH9
Ensembl:ENSDART00000103131 GeneID:58046 KEGG:dre:58046 CTD:58046
eggNOG:KOG0489 HOVERGEN:HBG094309 InParanoid:A2BE59
NextBio:20892310 ArrayExpress:Q98SH9 Bgee:Q98SH9 Uniprot:Q98SH9
Length = 302
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 47/87 (54%), Positives = 59/87 (67%)
Query: 195 MKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQ 254
+K+NH T G SR ++ Q ELEKEFH+NKYL+R RRIEIA+ LQL+E Q
Sbjct: 201 LKTNHGRDSDEDTSSGG--SRTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQ 258
Query: 255 IKIWFQNRRMKLKKEVLRPNISSTTML 281
+KIWFQNRRMK KK +LR ++ ML
Sbjct: 259 VKIWFQNRRMKQKK-MLREGLAQGLML 284
>UNIPROTKB|F1RSV7 [details] [associations]
symbol:F1RSV7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
EMBL:CU861636 Ensembl:ENSSSCT00000010205 OMA:RMKWRER Uniprot:F1RSV7
Length = 283
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 48/86 (55%), Positives = 58/86 (67%)
Query: 192 YPWMKSNHDASYSCKTGGG--------NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
+PWMKS ++ + GG NKR+R Y+R Q LELEKEF +NKY+SR RR+E
Sbjct: 120 FPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 179
Query: 244 IAHELQLTERQIKIWFQNRRMKLKKE 269
+A L LTER IKIWF NRRMK KKE
Sbjct: 180 LAVMLNLTERHIKIWF-NRRMKWKKE 204
>UNIPROTKB|Q9DEB6 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 EMBL:AB046532 IPI:IPI00807211 RefSeq:NP_990007.2
UniGene:Gga.210 ProteinModelPortal:Q9DEB6 SMR:Q9DEB6 STRING:Q9DEB6
Ensembl:ENSGALT00000009108 GeneID:395397 KEGG:gga:395397 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 InParanoid:Q9DEB6
OrthoDB:EOG42FSK7 NextBio:20815481 Uniprot:Q9DEB6
Length = 260
Score = 192 (72.6 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 190 TLYPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
T Y WM+ S S S KT +K R Y+ +Q LELEKEFHY++Y++ +R+ E+A L
Sbjct: 128 TPYEWMRRSIPSTSSSGKTRTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKAELAAAL 186
Query: 249 QLTERQIKIWFQNRRMKLKK 268
LTERQ+KIWFQNRR K +K
Sbjct: 187 GLTERQVKIWFQNRRAKERK 206
Score = 40 (19.1 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 26 QNQTFHPNQYYEPYNNNCPTKSEPNPCQYED 56
++ +P+ P N P P P QY D
Sbjct: 9 KDTNMYPSPVRHPSLNLNPQNYVPGPPQYSD 39
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 267 KKE 269
K++
Sbjct: 195 KRQ 197
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 267 KKE 269
K++
Sbjct: 195 KRQ 197
>RGD|2813 [details] [associations]
symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007379
"segment specification" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
"brain segmentation" evidence=ISO] [GO:0042474 "middle ear
morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 267 KKE 269
K++
Sbjct: 195 KRQ 197
>UNIPROTKB|P31246 [details] [associations]
symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
InParanoid:P31246 NextBio:603363 Genevestigator:P31246
GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 267 KKE 269
K++
Sbjct: 195 KRQ 197
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 137 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 196
Query: 267 KKE 269
K++
Sbjct: 197 KRQ 199
>UNIPROTKB|O43364 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0007379 "segment
specification" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
Uniprot:O43364
Length = 376
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 139 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 198
Query: 267 KKE 269
K++
Sbjct: 199 KRQ 201
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 223 (83.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
+GGG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK
Sbjct: 143 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 202
Query: 267 KKE 269
K++
Sbjct: 203 KRQ 205
>ZFIN|ZDB-GENE-990415-120 [details] [associations]
symbol:hoxd3a "homeo box D3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-120
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
EMBL:BX322661 Ensembl:ENSDART00000082359 Bgee:G8JL23 Uniprot:G8JL23
Length = 403
Score = 223 (83.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 48/99 (48%), Positives = 61/99 (61%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G +KR R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L LTERQIKIWFQNRRMK K
Sbjct: 165 GPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 224
Query: 268 KEVLRPNISSTTMLDEKLEAPPVFMP---AYSAALPKAN 303
K+ I + + +PP+ YS LP N
Sbjct: 225 KDQKSKGIMHSPLGHSPDRSPPLSGSNHIGYSGQLPNVN 263
>UNIPROTKB|P46692 [details] [associations]
symbol:CHOX-CAD1 "Homeobox protein CHOX-CAD" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
UniGene:Gga.210 HOVERGEN:HBG005302 EMBL:X57760 EMBL:X57761
IPI:IPI00582961 PIR:S16417 ProteinModelPortal:P46692 SMR:P46692
STRING:P46692 InParanoid:P46692 Uniprot:P46692
Length = 248
Score = 192 (72.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 190 TLYPWMK-SNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHEL 248
T Y WM+ S S S KT +K R Y+ +Q LELEKEFHY++Y++ +R+ E+A L
Sbjct: 116 TPYEWMRRSIPSTSSSGKTRTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKAELAAAL 174
Query: 249 QLTERQIKIWFQNRRMKLKK 268
LTERQ+KIWFQNRR K +K
Sbjct: 175 GLTERQVKIWFQNRRAKERK 194
Score = 38 (18.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 31 HPNQYYEPYNNNCPTKSEPNPCQYED 56
+P+ P N P P P QY D
Sbjct: 2 YPSPVRHPGLNLNPQNYVPGPPQYSD 27
>UNIPROTKB|J9NYN6 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 OMA:GDGAFVS EMBL:AAEX03017793
Ensembl:ENSCAFT00000048782 Uniprot:J9NYN6
Length = 248
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 51/105 (48%), Positives = 62/105 (59%)
Query: 185 GEDGATLYPWMKSNHDA---SYSCKTGGGNKRS--RQTYSRYQTLELEKEFHYNKYLSRK 239
G A+ + WMK A S + G + S R +S Q ELEKEFH+NKYL+R
Sbjct: 118 GLPAASTFEWMKVRRSAPRKSRPAEFGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRA 177
Query: 240 RRIEIAHELQLTERQIKIWFQNRRMKLKK---EVLRPNISSTTML 281
RRIEIA+ LQL + Q+KIWFQNRRMK KK E L P+ S L
Sbjct: 178 RRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGLLPSHSPVASL 222
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
R Q LELEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 20 RQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 69
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 220 RYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
R Q LELEKEFHYN+YL+R+RRIEIAH L L+ERQIKIWFQNRRMK KK+
Sbjct: 20 RQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 69
>UNIPROTKB|B7ZAD0 [details] [associations]
symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
Ensembl:ENST00000489475 Uniprot:B7ZAD0
Length = 358
Score = 214 (80.4 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 115 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 174
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 175 KAKGLASSSGGPSPAGSPP--QPMQSTA 200
Score = 38 (18.4 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 191 LYPWMKSNHDAS 202
++PWMK + S
Sbjct: 56 IFPWMKESRQTS 67
>UNIPROTKB|F8VXG0 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
Uniprot:F8VXG0
Length = 297
Score = 214 (80.4 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 54 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 113
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 114 KAKGLASSSGGPSPAGSPP--QPMQSTA 139
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 43/62 (69%), Positives = 48/62 (77%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
++R QT SRYQTLELEKEF N YL+ KR IE++H L LTERQIKIWFQNRRMK KK
Sbjct: 7 HRRGLQTCSRYQTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
Query: 271 LR 272
R
Sbjct: 67 QR 68
>UNIPROTKB|F6UWJ9 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3212 OMA:RAAWEAC
Ensembl:ENSCAFT00000026663 EMBL:AAEX03006513 RefSeq:XP_851108.1
GeneID:608880 KEGG:cfa:608880 Uniprot:F6UWJ9
Length = 342
Score = 219 (82.2 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 136 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 195
Query: 268 KE 269
++
Sbjct: 196 RQ 197
>UNIPROTKB|B7Z5N8 [details] [associations]
symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
Uniprot:B7Z5N8
Length = 299
Score = 214 (80.4 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 56 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 115
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 116 KAKGLASSSGGPSPAGSPP--QPMQSTA 141
>UNIPROTKB|F1RWG7 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
GO:GO:0021570 OMA:RAAWEAC GO:GO:0048857 EMBL:CU856160
RefSeq:XP_003131594.1 Ensembl:ENSSSCT00000019087 GeneID:100521989
KEGG:ssc:100521989 Uniprot:F1RWG7
Length = 353
Score = 219 (82.2 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 138 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 197
Query: 268 KE 269
++
Sbjct: 198 RQ 199
>UNIPROTKB|E1BGM6 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
GO:GO:0021570 CTD:3212 OMA:RAAWEAC GO:GO:0048857 EMBL:DAAA02049068
IPI:IPI00706154 RefSeq:NP_001178264.1 UniGene:Bt.17183
Ensembl:ENSBTAT00000013159 GeneID:616129 KEGG:bta:616129
NextBio:20899975 Uniprot:E1BGM6
Length = 354
Score = 219 (82.2 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 137 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 196
Query: 268 KE 269
++
Sbjct: 197 RQ 198
>UNIPROTKB|P14652 [details] [associations]
symbol:HOXB2 "Homeobox protein Hox-B2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=TAS] [GO:0008015 "blood circulation"
evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0008015 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
GO:GO:0002011 GO:GO:0021612 KO:K09302 GO:GO:0021569 GO:GO:0021570
HOGENOM:HOG000063664 HOVERGEN:HBG006088 EMBL:X16665 EMBL:BC074805
EMBL:BC074806 EMBL:X16176 EMBL:X14571 EMBL:X78978 IPI:IPI00027261
PIR:S07542 RefSeq:NP_002136.1 UniGene:Hs.514289
ProteinModelPortal:P14652 SMR:P14652 IntAct:P14652 STRING:P14652
PhosphoSite:P14652 DMDM:123270 PRIDE:P14652 DNASU:3212
Ensembl:ENST00000330070 GeneID:3212 KEGG:hsa:3212 UCSC:uc002inm.3
CTD:3212 GeneCards:GC17M046620 HGNC:HGNC:5113 MIM:142967
neXtProt:NX_P14652 PharmGKB:PA29389 eggNOG:NOG295272
InParanoid:P14652 OMA:RAAWEAC OrthoDB:EOG4QC167 PhylomeDB:P14652
GenomeRNAi:3212 NextBio:12780 ArrayExpress:P14652 Bgee:P14652
CleanEx:HS_HOXB2 Genevestigator:P14652 GermOnline:ENSG00000173917
GO:GO:0048857 Uniprot:P14652
Length = 356
Score = 219 (82.2 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
GGG +R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 140 GGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 199
Query: 268 KE 269
++
Sbjct: 200 RQ 201
>UNIPROTKB|P23682 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
InParanoid:P23682 NextBio:20815581 Uniprot:P23682
Length = 399
Score = 220 (82.5 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 53/123 (43%), Positives = 75/123 (60%)
Query: 191 LYPWMK---------SNHDASYSC---KTGGGN---KRSRQTYSRYQTLELEKEFHYNKY 235
++PWMK S+ ++ +C KT G+ KR+R Y+ Q +ELEKEFH+N+Y
Sbjct: 124 IFPWMKESRQNSKQKSSSPSTETCSGEKTPPGSSASKRARTAYTSAQLVELEKEFHFNRY 183
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAY 295
L R RR+E+A+ L L+ERQIKIWFQNRRMK KK+ + S++ +PP P
Sbjct: 184 LCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPP--QPMQ 241
Query: 296 SAA 298
S+A
Sbjct: 242 SSA 244
>UNIPROTKB|O93353 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
NextBio:20815320 Uniprot:O93353
Length = 413
Score = 214 (80.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 191 LYPWMK----------SNHDASYSC---KTGGG---NKRSRQTYSRYQTLELEKEFHYNK 234
++PWMK S+ + SC K+ G +KR+R Y+ Q +ELEKEFH+N+
Sbjct: 137 IFPWMKESRQNTKQKNSSSSSGESCAGDKSPPGQTSSKRARTAYTSAQLVELEKEFHFNR 196
Query: 235 YLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
YL R RR+E+A+ L LTERQIKIWFQNRRMK KK+
Sbjct: 197 YLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 231
Score = 39 (18.8 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 288 PPVFMPAYSAALPKANYDWNGSQIGEVGS 316
P +F + + P AN D++G+ G +G+
Sbjct: 352 PSIFGLTHLSHPPSANMDYSGA--GPMGN 378
>UNIPROTKB|F1N2F0 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 OMA:NNPVANW EMBL:DAAA02012841 IPI:IPI00698690
Ensembl:ENSBTAT00000007361 Uniprot:F1N2F0
Length = 263
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 196 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 252
>UNIPROTKB|E2R520 [details] [associations]
symbol:HOXA9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0042118 "endothelial cell activation"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0035115
GO:GO:0009954 GO:GO:0048706 GO:GO:0030879 GO:GO:0060216
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
CTD:3205 KO:K09294 OMA:SWLEPAP EMBL:AAEX03009390 RefSeq:XP_539489.2
ProteinModelPortal:E2R520 Ensembl:ENSCAFT00000004746 GeneID:482372
KEGG:cfa:482372 NextBio:20856985 Uniprot:E2R520
Length = 272
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P SN A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 181 ENESGGDKPPIDPSNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 238
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 239 VARLLNLTERQVKIWFQNRRMKMKK 263
>UNIPROTKB|P31274 [details] [associations]
symbol:HOXC9 "Homeobox protein Hox-C9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 EMBL:CH471054 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 PDB:2LP0 PDBsum:2LP0 HOVERGEN:HBG016849
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 EMBL:AY014302
EMBL:AY014301 EMBL:AK000445 EMBL:AK315194 EMBL:BC053894
IPI:IPI00644080 PIR:S15532 RefSeq:NP_008828.1 UniGene:Hs.658823
ProteinModelPortal:P31274 SMR:P31274 IntAct:P31274 STRING:P31274
DMDM:20141537 PRIDE:P31274 DNASU:3225 Ensembl:ENST00000303450
Ensembl:ENST00000508190 GeneID:3225 KEGG:hsa:3225 UCSC:uc001seq.3
CTD:3225 GeneCards:GC12P054388 HGNC:HGNC:5130 MIM:142971
neXtProt:NX_P31274 PharmGKB:PA29405 eggNOG:NOG288226
InParanoid:P31274 OMA:NNPVANW OrthoDB:EOG4SXNCJ PhylomeDB:P31274
GenomeRNAi:3225 NextBio:12835 Bgee:P31274 CleanEx:HS_HOXC9
Genevestigator:P31274 GermOnline:ENSG00000180806 Uniprot:P31274
Length = 260
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 193 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 249
>UNIPROTKB|F1SHT5 [details] [associations]
symbol:LOC100737711 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 OMA:SWLEPAP EMBL:CU570959 EMBL:CU480612
RefSeq:XP_003134886.1 RefSeq:XP_003484104.1
Ensembl:ENSSSCT00000018181 Ensembl:ENSSSCT00000029161
GeneID:100519066 GeneID:100737711 KEGG:ssc:100519066
KEGG:ssc:100737711 Uniprot:F1SHT5
Length = 272
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P SN A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 181 ENESGGDKPPIDPSNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 238
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 239 VARLLNLTERQVKIWFQNRRMKMKK 263
>MGI|MGI:96199 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96199
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GeneTree:ENSGT00700000104054
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:M35603 CTD:3225 eggNOG:NOG288226
OMA:NNPVANW OrthoDB:EOG4SXNCJ EMBL:X55318 EMBL:AK012173
EMBL:AK078758 EMBL:BC050838 EMBL:X07647 IPI:IPI00109000 PIR:A43821
RefSeq:NP_032298.1 UniGene:Mm.4765 ProteinModelPortal:P09633
SMR:P09633 IntAct:P09633 MINT:MINT-1172589 STRING:P09633
PRIDE:P09633 Ensembl:ENSMUST00000001706 GeneID:15427 KEGG:mmu:15427
UCSC:uc007xxa.1 InParanoid:P09633 NextBio:288182 Bgee:P09633
CleanEx:MM_HOXC9 Genevestigator:P09633
GermOnline:ENSMUSG00000036139 Uniprot:P09633
Length = 260
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 193 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 249
>ZFIN|ZDB-GENE-000328-5 [details] [associations]
symbol:hoxc9a "homeo box C9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:2001213 "negative
regulation of vasculogenesis" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000328-5 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX005254 OMA:NNPVANW GO:GO:2001213 IPI:IPI00484007
UniGene:Dr.132199 SMR:A2BE65 Ensembl:ENSDART00000127384
InParanoid:A2BE65 Uniprot:A2BE65
Length = 270
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 203 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 259
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 17 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKL 76
Query: 267 KK 268
KK
Sbjct: 77 KK 78
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 21 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKL 80
Query: 267 KK 268
KK
Sbjct: 81 KK 82
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 2 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 58
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 15 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKL 74
Query: 267 KK 268
KK
Sbjct: 75 KK 76
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 16 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKL 75
Query: 267 KK 268
KK
Sbjct: 76 KK 77
>ZFIN|ZDB-GENE-990415-109 [details] [associations]
symbol:hoxb9a "homeo box B9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-109
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX927395 Ensembl:ENSDART00000006479 Bgee:H7BWW5 Uniprot:H7BWW5
Length = 253
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 199 HDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIW 258
+D S + +++ R Y++YQTLELEKEF +N YL+R RR E+A L LTERQ+KIW
Sbjct: 176 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIW 235
Query: 259 FQNRRMKLKK 268
FQNRRMK+KK
Sbjct: 236 FQNRRMKMKK 245
>RGD|1310780 [details] [associations]
symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0021546 "rhombomere development"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
Length = 428
Score = 214 (80.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 186 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 245
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 246 KAKGLASSSGGPSPAGSPP--QPMQSTA 271
Score = 38 (18.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 191 LYPWMKSNHDAS 202
++PWMK + S
Sbjct: 129 IFPWMKESRQTS 140
>UNIPROTKB|P14651 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
Ensembl:ENST00000470495 Ensembl:ENST00000476342
Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
Uniprot:P14651
Length = 431
Score = 214 (80.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 188 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 247
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 248 KAKGLASSSGGPSPAGSPP--QPMQSTA 273
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 191 LYPWMKSNHDAS 202
++PWMK + S
Sbjct: 129 IFPWMKESRQTS 140
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 222 (83.2 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 50/102 (49%), Positives = 59/102 (57%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTG--GGN------------KRSRQTYSRYQTLELEKE 229
+G D YPWMK + S G N +R R Y+ Q LELEKE
Sbjct: 157 DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKE 216
Query: 230 FHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVL 271
FH+NKYL R RRIEIA L LTERQ+K+WFQNRRMK K++ L
Sbjct: 217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTL 258
>MGI|MGI:96184 [details] [associations]
symbol:Hoxb3 "homeobox B3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IDA] [GO:0051216
"cartilage development" evidence=IGI] [GO:0060216 "definitive
hemopoiesis" evidence=IGI] [GO:0060324 "face development"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96184
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:X66177 EMBL:S35628
EMBL:U02278 EMBL:M18168 IPI:IPI00315401 PIR:S20963
RefSeq:NP_001073338.1 RefSeq:NP_034588.2 UniGene:Mm.342481
ProteinModelPortal:P09026 SMR:P09026 STRING:P09026 PaxDb:P09026
PRIDE:P09026 Ensembl:ENSMUST00000055334 Ensembl:ENSMUST00000093944
GeneID:15410 KEGG:mmu:15410 InParanoid:P09026 NextBio:288128
Bgee:P09026 CleanEx:MM_HOXB3 Genevestigator:P09026
GermOnline:ENSMUSG00000048763 Uniprot:P09026
Length = 433
Score = 214 (80.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 191 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 250
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
++S++ +PP P S A
Sbjct: 251 KAKGLASSSGGPSPAGSPP--QPMQSTA 276
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 191 LYPWMKSNHDAS 202
++PWMK + S
Sbjct: 129 IFPWMKESRQTS 140
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 17 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKL 76
Query: 267 KK 268
KK
Sbjct: 77 KK 78
>UNIPROTKB|F1NH10 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0021546 "rhombomere development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0060324 "face development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000979
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
OMA:ATYYDNT IPI:IPI00594134 EMBL:AADN02027051
Ensembl:ENSGALT00000021935 Uniprot:F1NH10
Length = 377
Score = 217 (81.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 52/123 (42%), Positives = 73/123 (59%)
Query: 191 LYPWMKSNHD------ASYSCKTGGG---------NKRSRQTYSRYQTLELEKEFHYNKY 235
++PWMK + +S S +T G +KR+R Y+ Q +ELEKEFH+N+Y
Sbjct: 123 IFPWMKESRQNSKQKSSSPSTETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRY 182
Query: 236 LSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEVLRPNISSTTMLDEKLEAPPVFMPAY 295
L R RR+E+A+ L L+ERQIKIWFQNRRMK KK+ + S++ +PP P
Sbjct: 183 LCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTGSPP--QPMQ 240
Query: 296 SAA 298
S+A
Sbjct: 241 SSA 243
>ZFIN|ZDB-GENE-990415-104 [details] [associations]
symbol:hoxb3a "homeo box B3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
Length = 417
Score = 218 (81.8 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKEV 270
+KR+R Y+ Q +ELEKEFH+N+YL R RR+E+A+ L L+ERQIKIWFQNRRMK KK+
Sbjct: 180 SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQ 239
Query: 271 LRPNISSTTMLDEKLEAPPVFMPAYSAA 298
I S++ +PP +P S+A
Sbjct: 240 KSKGIGSSSGGPSPTGSPP--LPMQSSA 265
>MGI|MGI:96183 [details] [associations]
symbol:Hoxb2 "homeobox B2" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0021569 "rhombomere 3 development" evidence=IGI]
[GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021612
"facial nerve structural organization" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI] [GO:0048705
"skeletal system morphogenesis" evidence=IGI;IMP] [GO:0048857
"neural nucleus development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96183 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0048704 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
HOGENOM:HOG000063664 HOVERGEN:HBG006088 CTD:3212 eggNOG:NOG295272
OMA:RAAWEAC OrthoDB:EOG4QC167 GO:GO:0048857 EMBL:AL606824
EMBL:BC138494 EMBL:BC138495 IPI:IPI00124385 RefSeq:NP_598793.2
UniGene:Mm.281153 ProteinModelPortal:P0C1T1 SMR:P0C1T1
STRING:P0C1T1 PhosphoSite:P0C1T1 PRIDE:P0C1T1
Ensembl:ENSMUST00000100523 GeneID:103889 KEGG:mmu:103889
UCSC:uc007lby.1 InParanoid:P0C1T1 NextBio:356175 Bgee:P0C1T1
CleanEx:MM_HOXB2 Genevestigator:P0C1T1 Uniprot:P0C1T1
Length = 354
Score = 216 (81.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G G++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 138 GSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 197
Query: 268 KE 269
++
Sbjct: 198 RQ 199
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P +N A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 21 ENESGGDKPPIDPNNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 78
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 79 VARLLNLTERQVKIWFQNRRMKMKK 103
>UNIPROTKB|P31269 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0042118 "endothelial
cell activation" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0042118 GO:GO:0045638 EMBL:AC004080 UniGene:Hs.659350
HOVERGEN:HBG016849 HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ
InterPro:IPR017112 PIRSF:PIRSF037109 EMBL:U82759 EMBL:AF010258
EMBL:BT006990 EMBL:BC006537 EMBL:BC010023 EMBL:U41813
IPI:IPI00010744 PIR:S14929 RefSeq:NP_689952.1
ProteinModelPortal:P31269 SMR:P31269 IntAct:P31269 STRING:P31269
PhosphoSite:P31269 DMDM:6166219 PRIDE:P31269 DNASU:3205
Ensembl:ENST00000343483 GeneID:3205 KEGG:hsa:3205 UCSC:uc003syt.3
CTD:3205 GeneCards:GC07M027214 HGNC:HGNC:5109 MIM:142956
neXtProt:NX_P31269 PharmGKB:PA29386 InParanoid:P31269 KO:K09294
OMA:SWLEPAP PhylomeDB:P31269 ChiTaRS:HOXA9 GenomeRNAi:3205
NextBio:12752 ArrayExpress:P31269 Bgee:P31269 CleanEx:HS_HOXA9
Genevestigator:P31269 GermOnline:ENSG00000078399 Uniprot:P31269
Length = 272
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P +N A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 181 ENESGGDKPPIDPNNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 238
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 239 VARLLNLTERQVKIWFQNRRMKMKK 263
>MGI|MGI:96180 [details] [associations]
symbol:Hoxa9 "homeobox A9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0009954 "proximal/distal
pattern formation" evidence=IGI] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030879 "mammary gland development" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0042118 "endothelial cell activation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] [GO:0060216 "definitive hemopoiesis"
evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96180
GO:GO:0005737 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 eggNOG:NOG286554 GO:GO:0035115
GO:GO:0009954 GO:GO:0048706 GO:GO:0030879 GO:GO:0045638
GO:GO:0060216 GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 CTD:3205 KO:K09294 OMA:SWLEPAP EMBL:AB005457
EMBL:AB005458 EMBL:AB008914 EMBL:BC055059 EMBL:M28449
IPI:IPI00108996 IPI:IPI00230762 PIR:A31400 PIR:JC6553
RefSeq:NP_034586.1 UniGene:Mm.4694 PDB:1PUF PDBsum:1PUF
ProteinModelPortal:P09631 SMR:P09631 DIP:DIP-35619N IntAct:P09631
MINT:MINT-210007 STRING:P09631 PhosphoSite:P09631 PRIDE:P09631
Ensembl:ENSMUST00000048680 Ensembl:ENSMUST00000114425 GeneID:15405
KEGG:mmu:15405 UCSC:uc009byl.1 InParanoid:P09631
EvolutionaryTrace:P09631 NextBio:288114 Bgee:P09631
CleanEx:MM_HOXA9 Genevestigator:P09631
GermOnline:ENSMUSG00000038227 Uniprot:P09631
Length = 271
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P +N A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 180 ENESGGDKPPIDPNNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 237
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 238 VARLLNLTERQVKIWFQNRRMKMKK 262
>RGD|1310001 [details] [associations]
symbol:Hoxa9 "homeobox A9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030879 "mammary gland development" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0042118 "endothelial cell activation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0060216 "definitive hemopoiesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1310001 GO:GO:0005737
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0035115 GO:GO:0009954 GO:GO:0048706
GO:GO:0030879 GO:GO:0060216 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 OMA:SWLEPAP EMBL:CH474011 EMBL:AC122669
IPI:IPI00191520 RefSeq:XP_001057018.1 RefSeq:XP_003749799.1
RefSeq:XP_003749806.1 RefSeq:XP_003752231.1
Ensembl:ENSRNOT00000009487 GeneID:100909740 GeneID:100911710
GeneID:297099 KEGG:rno:100909740 KEGG:rno:100911710 KEGG:rno:297099
UCSC:RGD:1310001 CTD:297099 NextBio:642059 Uniprot:D3ZSU5
Length = 271
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 184 EGEDGATLYPWMKSNHDASYSCKTGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIE 243
E E G P +N A++ ++ R Y+++QTLELEKEF +N YL+R RR E
Sbjct: 180 ENESGGDKPPIDPNNPAANWL--HARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYE 237
Query: 244 IAHELQLTERQIKIWFQNRRMKLKK 268
+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 238 VARLLNLTERQVKIWFQNRRMKMKK 262
>ZFIN|ZDB-GENE-000823-2 [details] [associations]
symbol:hoxa9b "homeo box A9b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-2 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AL645795 HOVERGEN:HBG016849 HOGENOM:HOG000231180
OrthoDB:EOG4D26QZ InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AF071249 EMBL:BC095300 EMBL:DQ060537 IPI:IPI00498950
RefSeq:NP_571608.1 UniGene:Dr.88308 ProteinModelPortal:Q9YGT5
SMR:Q9YGT5 STRING:Q9YGT5 GeneID:58048 KEGG:dre:58048 CTD:58048
eggNOG:NOG261069 NextBio:20892312 ArrayExpress:Q9YGT5
Uniprot:Q9YGT5
Length = 253
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YLSR RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 188 RKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 244
>UNIPROTKB|D4A426 [details] [associations]
symbol:100365058 "Homeo box B2 (Predicted)" species:10116
"Rattus norvegicus" [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
EMBL:CH473948 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
CTD:3212 OrthoDB:EOG4QC167 GO:GO:0048857 IPI:IPI00958412
RefSeq:XP_002724587.1 RefSeq:XP_002727852.1 UniGene:Rn.231109
Ensembl:ENSRNOT00000011213 GeneID:100361765 KEGG:rno:100361765
UCSC:RGD:2319509 Uniprot:D4A426
Length = 355
Score = 216 (81.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 208 GGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLK 267
G G++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K
Sbjct: 139 GSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 198
Query: 268 KE 269
++
Sbjct: 199 RQ 200
>UNIPROTKB|E2QT60 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 Ensembl:ENSCAFT00000026663
Uniprot:E2QT60
Length = 310
Score = 203 (76.5 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 39/60 (65%), Positives = 46/60 (76%)
Query: 210 GNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
G R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K++
Sbjct: 130 GLDRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 189
Score = 41 (19.5 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 186 EDGATL---YPWMKSNHDA 201
EDG L +PWMK A
Sbjct: 73 EDGPALVPEFPWMKEKKSA 91
>UNIPROTKB|Q08727 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302
HOVERGEN:HBG006088 CTD:3199 EMBL:X74323 IPI:IPI00584066 PIR:I50589
PIR:S35941 RefSeq:NP_990481.1 UniGene:Gga.524
ProteinModelPortal:Q08727 SMR:Q08727 GeneID:396055 KEGG:gga:396055
NextBio:20816115 Uniprot:Q08727
Length = 375
Score = 216 (81.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 209 GGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
GG++R R Y+ Q LELEKEFH+NKYL R RR+EIA L LTERQ+K+WFQNRRMK K+
Sbjct: 138 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 197
Query: 269 E 269
+
Sbjct: 198 Q 198
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 217 (81.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 49/98 (50%), Positives = 63/98 (64%)
Query: 188 GATLYPWMK----------SNHDASYSC---KTGGG---NKRSRQTYSRYQTLELEKEFH 231
G ++PWMK S + SC K+ G +KR+R Y+ Q +ELEKEFH
Sbjct: 153 GKQIFPWMKESRQNTKQKTSGSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFH 212
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL R RR+E+A+ L LTERQIKIWFQNRRMK KK+
Sbjct: 213 FNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 250
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 217 (81.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 49/98 (50%), Positives = 63/98 (64%)
Query: 188 GATLYPWMK----------SNHDASYSC---KTGGG---NKRSRQTYSRYQTLELEKEFH 231
G ++PWMK S + SC K+ G +KR+R Y+ Q +ELEKEFH
Sbjct: 153 GKQIFPWMKESRQNTKQKTSGSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFH 212
Query: 232 YNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKKE 269
+N+YL R RR+E+A+ L LTERQIKIWFQNRRMK KK+
Sbjct: 213 FNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 250
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 36/57 (63%), Positives = 49/57 (85%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKLKK
Sbjct: 1 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLKK 57
>ZFIN|ZDB-GENE-990415-116 [details] [associations]
symbol:hoxd10a "homeo box D10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-116 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:BX322661 IPI:IPI00996139
Ensembl:ENSDART00000130837 ArrayExpress:E9QBR9 Bgee:E9QBR9
Uniprot:E9QBR9
Length = 341
Score = 204 (76.9 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 207 TGGGNKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKL 266
T ++ R Y+++QTLELEKEF +N YL+R+RR+EI+ + LT+RQ+KIWFQNRRMKL
Sbjct: 254 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKL 313
Query: 267 KK 268
KK
Sbjct: 314 KK 315
Score = 43 (20.2 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 10 YNQMNHNVMQSFNNWYQNQTFHPNQYYEPYNNNCPTKSEPNP-CQYE-----DRDAR 60
Y +++ + N Y N+T PN N P K++ P + E DRD R
Sbjct: 149 YFRLSQTYATAKNPDYDNETMSPNTTLMQLNRATP-KAQSTPFVEVEKKLAHDRDTR 204
Score = 40 (19.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 46 KSEPNPCQYEDRDAR 60
K E N C Y D+ A+
Sbjct: 106 KEETNCCMYSDKRAK 120
>UNIPROTKB|E1BQM6 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005739 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060326 GO:GO:0060070 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 OMA:CSFQPKP EMBL:AADN02070200
EMBL:AADN02070201 IPI:IPI00587901 Ensembl:ENSGALT00000001947
Uniprot:E1BQM6
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 182 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 239
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 104 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 160
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 2 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 58
>UNIPROTKB|F1NJG5 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
IPI:IPI00583350 OMA:SWLEPAP EMBL:AADN02000988
Ensembl:ENSGALT00000019407 Uniprot:F1NJG5
Length = 254
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 189 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 245
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 104 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 160
>UNIPROTKB|E1BIU9 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706
GO:GO:0030879 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP EMBL:DAAA02049060
IPI:IPI00712637 RefSeq:NP_001178115.1 UniGene:Bt.69910 PRIDE:E1BIU9
Ensembl:ENSBTAT00000034888 GeneID:783873 KEGG:bta:783873
NextBio:20926355 Uniprot:E1BIU9
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
>UNIPROTKB|E2RQ11 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326
"cell chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005739
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326 GO:GO:0060070
GO:GO:0048706 GO:GO:0030879 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP
EMBL:AAEX03006516 RefSeq:XP_864745.2 ProteinModelPortal:E2RQ11
Ensembl:ENSCAFT00000026702 GeneID:608958 KEGG:cfa:608958
NextBio:20894578 Uniprot:E2RQ11
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
>UNIPROTKB|P17482 [details] [associations]
symbol:HOXB9 "Homeobox protein Hox-B9" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0060326 "cell chemotaxis"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0060326 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:AY014296 EMBL:AY014295
EMBL:AK315480 EMBL:BC015565 EMBL:X16172 IPI:IPI00014539 PIR:A37042
RefSeq:NP_076922.1 UniGene:Hs.463350 ProteinModelPortal:P17482
SMR:P17482 IntAct:P17482 MINT:MINT-118223 STRING:P17482
PhosphoSite:P17482 DMDM:20141507 PaxDb:P17482 PRIDE:P17482
Ensembl:ENST00000311177 GeneID:3219 KEGG:hsa:3219 UCSC:uc002inx.3
CTD:3219 GeneCards:GC17M046694 HGNC:HGNC:5120 HPA:HPA031463
MIM:142964 neXtProt:NX_P17482 PharmGKB:PA29396 eggNOG:NOG325913
InParanoid:P17482 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ PhylomeDB:P17482
GenomeRNAi:3219 NextBio:12808 ArrayExpress:P17482 Bgee:P17482
CleanEx:HS_HOXB9 Genevestigator:P17482 GermOnline:ENSG00000170689
Uniprot:P17482
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 212 KRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
++ R Y+++QTLELEKEF +N YL+R RR E+A L LTERQ+KIWFQNRRMK+KK
Sbjct: 97 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 153
>MGI|MGI:96190 [details] [associations]
symbol:Hoxb9 "homeobox B9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030879 "mammary gland development"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0048706
"embryonic skeletal system development" evidence=IGI;IMP]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0060326 "cell chemotaxis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96190 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CH466556 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AL645478 CTD:3219 eggNOG:NOG325913 OMA:CSFQPKP
OrthoDB:EOG4DZ1VZ EMBL:S66855 EMBL:X64316 EMBL:M34857
IPI:IPI00121375 IPI:IPI00828552 PIR:A56572 RefSeq:NP_032296.2
UniGene:Mm.258271 ProteinModelPortal:P20615 STRING:P20615
PhosphoSite:P20615 PRIDE:P20615 Ensembl:ENSMUST00000000010
GeneID:15417 KEGG:mmu:15417 InParanoid:P20615 NextBio:288154
CleanEx:MM_HOXB9 Genevestigator:P20615
GermOnline:ENSMUSG00000020875 Uniprot:P20615
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
>RGD|1306158 [details] [associations]
symbol:Hoxb9 "homeo box B9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0030879 "mammary gland development" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0060326 "cell chemotaxis" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1306158
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326
EMBL:CH473948 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 CTD:3219 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ IPI:IPI00195907
RefSeq:NP_001093967.1 UniGene:Rn.198320 SMR:D3ZW24
Ensembl:ENSRNOT00000009951 GeneID:287647 KEGG:rno:287647
UCSC:RGD:1306158 Uniprot:D3ZW24
Length = 250
Score = 200 (75.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 211 NKRSRQTYSRYQTLELEKEFHYNKYLSRKRRIEIAHELQLTERQIKIWFQNRRMKLKK 268
+++ R Y++YQTLELEKEF +N YL+R RR E+A L L+ERQ+KIWFQNRRMK+KK
Sbjct: 185 SRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242
WARNING: HSPs involving 1026 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 321 306 0.00099 115 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1276
No. of states in DFA: 613 (65 KB)
Total size of DFA: 250 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.55u 0.16s 30.71t Elapsed: 00:00:02
Total cpu time: 30.58u 0.16s 30.74t Elapsed: 00:00:02
Start: Thu Aug 15 16:15:09 2013 End: Thu Aug 15 16:15:11 2013
WARNINGS ISSUED: 2