Query psy13596
Match_columns 186
No_of_seqs 185 out of 211
Neff 5.4
Searched_HMMs 46136
Date Fri Aug 16 23:13:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13596.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13596hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3390|consensus 100.0 1.3E-38 2.7E-43 240.5 14.9 119 47-172 1-119 (120)
2 PF06320 GCN5L1: GCN5-like pro 100.0 2E-37 4.3E-42 241.0 14.9 121 51-178 1-121 (121)
3 KOG1163|consensus 99.8 8.9E-22 1.9E-26 170.7 -3.3 106 7-130 80-194 (341)
4 KOG1165|consensus 99.8 6.7E-22 1.4E-26 177.1 -6.8 122 9-147 95-225 (449)
5 KOG1164|consensus 99.4 7.1E-15 1.5E-19 128.0 -4.8 104 9-127 92-207 (322)
6 PHA02882 putative serine/threo 97.7 2E-05 4.2E-10 66.8 3.1 84 5-104 94-177 (294)
7 cd05629 STKc_NDR_like_fungal C 97.5 6E-05 1.3E-09 66.1 3.1 58 8-72 71-129 (377)
8 cd05079 PTKc_Jak1_rpt2 Catalyt 97.4 0.00012 2.7E-09 60.9 3.0 63 3-72 73-137 (284)
9 cd05599 STKc_NDR_like Catalyti 97.3 0.00014 3.1E-09 63.1 3.1 57 9-72 72-129 (364)
10 cd07859 STKc_TDY_MAPK_plant Ca 97.3 0.00019 4.2E-09 61.0 3.3 55 11-72 77-131 (338)
11 cd05592 STKc_nPKC_theta_delta 97.2 0.00022 4.7E-09 61.3 3.0 57 9-72 67-124 (316)
12 PTZ00284 protein kinase; Provi 97.2 0.00024 5.3E-09 64.6 3.4 57 10-72 204-260 (467)
13 cd05573 STKc_ROCK_NDR_like Cat 97.2 0.00025 5.5E-09 60.8 3.3 57 9-72 72-129 (350)
14 KOG0663|consensus 97.2 4.4E-05 9.5E-10 69.5 -1.5 120 10-146 149-296 (419)
15 cd05617 STKc_aPKC_zeta Catalyt 97.2 0.00024 5.3E-09 61.2 3.1 57 9-72 67-124 (327)
16 cd07869 STKc_PFTAIRE1 Catalyti 97.2 0.00028 6E-09 59.6 3.3 57 9-72 74-131 (303)
17 KOG0581|consensus 97.2 6.5E-05 1.4E-09 68.3 -0.6 101 3-125 144-245 (364)
18 cd05059 PTKc_Tec_like Catalyti 97.2 0.00033 7.1E-09 57.4 3.6 57 9-72 70-128 (256)
19 cd05624 STKc_MRCK_beta Catalyt 97.2 0.00027 5.8E-09 61.1 3.2 57 9-72 72-130 (331)
20 cd05600 STKc_Sid2p_Dbf2p Catal 97.2 0.00032 6.9E-09 60.3 3.5 57 9-72 72-129 (333)
21 cd05620 STKc_nPKC_delta Cataly 97.2 0.00029 6.2E-09 60.5 3.1 57 9-72 67-124 (316)
22 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.2 0.00026 5.6E-09 59.2 2.7 56 10-72 88-145 (274)
23 cd05615 STKc_cPKC_alpha Cataly 97.2 0.00032 7E-09 60.4 3.3 57 9-72 72-129 (323)
24 cd05597 STKc_DMPK_like Catalyt 97.2 0.00027 5.9E-09 61.0 2.8 57 9-72 72-130 (331)
25 cd05587 STKc_cPKC Catalytic do 97.2 0.00031 6.7E-09 60.3 3.1 57 9-72 72-129 (324)
26 PHA03209 serine/threonine kina 97.1 0.00031 6.7E-09 61.5 3.0 56 10-72 129-185 (357)
27 PTZ00426 cAMP-dependent protei 97.1 0.00032 6.9E-09 61.4 3.0 57 9-72 102-159 (340)
28 cd05598 STKc_LATS Catalytic do 97.1 0.00032 6.8E-09 61.4 3.0 57 9-72 72-129 (376)
29 cd05626 STKc_LATS2 Catalytic d 97.1 0.00034 7.4E-09 61.7 3.1 57 9-72 72-129 (381)
30 cd05585 STKc_YPK1_like Catalyt 97.1 0.00036 7.9E-09 59.5 3.2 57 9-72 64-121 (312)
31 cd05147 RIO1_euk RIO kinase fa 97.1 0.00014 3E-09 59.5 0.5 86 13-115 92-179 (190)
32 cd05619 STKc_nPKC_theta Cataly 97.1 0.00033 7.2E-09 60.2 2.9 57 9-72 67-124 (316)
33 cd05064 PTKc_EphR_A10 Catalyti 97.1 0.00034 7.3E-09 57.9 2.8 57 9-72 77-135 (266)
34 cd05586 STKc_Sck1_like Catalyt 97.1 0.00037 7.9E-09 59.8 3.1 57 9-72 67-124 (330)
35 cd05627 STKc_NDR2 Catalytic do 97.1 0.00036 7.9E-09 60.8 3.1 57 9-72 72-129 (360)
36 cd07865 STKc_CDK9 Catalytic do 97.1 0.00043 9.3E-09 57.7 3.3 56 10-72 91-147 (310)
37 cd05628 STKc_NDR1 Catalytic do 97.1 0.00037 7.9E-09 61.0 3.0 57 9-72 72-129 (363)
38 cd05601 STKc_CRIK Catalytic do 97.1 0.00046 1E-08 59.1 3.3 57 9-72 72-130 (330)
39 KOG0661|consensus 97.1 0.00025 5.3E-09 66.8 1.7 79 12-106 84-163 (538)
40 cd05571 STKc_PKB Catalytic dom 97.1 0.00041 8.9E-09 59.6 2.9 57 9-72 66-123 (323)
41 cd05623 STKc_MRCK_alpha Cataly 97.1 0.00041 8.9E-09 59.8 2.9 57 9-72 72-130 (332)
42 cd07841 STKc_CDK7 Catalytic do 97.0 0.00041 8.9E-09 57.9 2.7 56 10-72 74-130 (298)
43 cd05612 STKc_PRKX_like Catalyt 97.0 0.0005 1.1E-08 58.0 3.2 57 9-72 72-129 (291)
44 cd05084 PTKc_Fes Catalytic dom 97.0 0.0005 1.1E-08 55.9 3.1 57 9-72 64-122 (252)
45 cd07871 STKc_PCTAIRE3 Catalyti 97.0 0.00056 1.2E-08 57.5 3.5 56 10-72 75-131 (288)
46 cd05066 PTKc_EphR_A Catalytic 97.0 0.0005 1.1E-08 56.6 3.1 57 9-72 76-134 (267)
47 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.0 0.00039 8.5E-09 57.1 2.4 56 10-72 71-128 (258)
48 cd07832 STKc_CCRK Catalytic do 97.0 0.00052 1.1E-08 56.5 3.1 57 9-72 70-127 (286)
49 cd05602 STKc_SGK1 Catalytic do 97.0 0.00049 1.1E-08 59.1 2.9 57 9-72 67-124 (325)
50 cd05038 PTKc_Jak_rpt2 Catalyti 97.0 0.00055 1.2E-08 56.2 3.1 63 3-72 73-137 (284)
51 cd07845 STKc_CDK10 Catalytic d 97.0 0.00054 1.2E-08 57.9 3.1 56 10-72 80-136 (309)
52 cd05115 PTKc_Zap-70 Catalytic 97.0 0.00047 1E-08 56.8 2.6 56 10-72 66-123 (257)
53 cd05594 STKc_PKB_alpha Catalyt 97.0 0.00045 9.7E-09 59.3 2.5 59 8-72 65-124 (325)
54 PHA03207 serine/threonine kina 97.0 0.00057 1.2E-08 60.7 3.1 57 9-72 157-213 (392)
55 cd05588 STKc_aPKC Catalytic do 97.0 0.00058 1.3E-08 58.9 3.1 57 9-72 67-124 (329)
56 cd05580 STKc_PKA Catalytic dom 97.0 0.00066 1.4E-08 56.9 3.2 57 9-72 72-129 (290)
57 cd05625 STKc_LATS1 Catalytic d 97.0 0.0006 1.3E-08 59.9 3.1 57 9-72 72-129 (382)
58 cd07862 STKc_CDK6 Catalytic do 96.9 0.0007 1.5E-08 56.3 3.3 57 9-72 80-138 (290)
59 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 96.9 0.00055 1.2E-08 56.7 2.7 58 8-72 77-136 (284)
60 PHA03212 serine/threonine kina 96.9 0.00067 1.4E-08 60.8 3.3 56 10-72 155-210 (391)
61 cd05610 STKc_MASTL Catalytic d 96.9 0.00052 1.1E-08 66.1 2.6 57 9-72 75-132 (669)
62 cd07857 STKc_MPK1 Catalytic do 96.9 0.0007 1.5E-08 58.1 3.1 57 9-72 77-133 (332)
63 cd05616 STKc_cPKC_beta Catalyt 96.9 0.00069 1.5E-08 58.1 3.0 57 9-72 72-129 (323)
64 cd06645 STKc_MAP4K3 Catalytic 96.9 0.00078 1.7E-08 55.2 3.2 56 10-72 78-134 (267)
65 cd07831 STKc_MOK Catalytic dom 96.9 0.00075 1.6E-08 55.5 3.1 62 4-72 66-128 (282)
66 cd05595 STKc_PKB_beta Catalyti 96.9 0.00075 1.6E-08 58.1 3.1 57 9-72 66-123 (323)
67 cd05590 STKc_nPKC_eta Catalyti 96.9 0.00074 1.6E-08 58.0 3.0 57 9-72 67-124 (320)
68 PHA03390 pk1 serine/threonine- 96.9 0.0008 1.7E-08 56.0 2.9 56 10-72 81-137 (267)
69 cd07872 STKc_PCTAIRE2 Catalyti 96.8 0.00083 1.8E-08 56.9 3.0 56 10-72 76-132 (309)
70 cd07844 STKc_PCTAIRE_like Cata 96.8 0.00096 2.1E-08 55.5 3.3 57 9-72 74-131 (291)
71 cd05591 STKc_nPKC_epsilon Cata 96.8 0.00093 2E-08 57.2 3.3 56 10-72 68-124 (321)
72 cd05605 STKc_GRK4_like Catalyt 96.8 0.00096 2.1E-08 56.0 3.3 57 9-72 71-130 (285)
73 cd05575 STKc_SGK Catalytic dom 96.8 0.00086 1.9E-08 57.5 2.9 57 9-72 67-124 (323)
74 cd07855 STKc_ERK5 Catalytic do 96.8 0.00077 1.7E-08 57.9 2.5 57 9-72 79-135 (334)
75 cd05618 STKc_aPKC_iota Catalyt 96.8 0.0009 2E-08 57.8 2.9 57 9-72 67-124 (329)
76 cd05593 STKc_PKB_gamma Catalyt 96.8 0.00092 2E-08 57.8 3.0 57 9-72 66-123 (328)
77 cd07878 STKc_p38beta_MAPK11 Ca 96.8 0.00081 1.8E-08 57.9 2.6 54 11-72 93-146 (343)
78 cd07843 STKc_CDC2L1 Catalytic 96.8 0.00092 2E-08 55.8 2.8 56 10-72 78-134 (293)
79 cd05041 PTKc_Fes_like Catalyti 96.8 0.0011 2.4E-08 53.6 3.2 57 9-72 63-121 (251)
80 cd07868 STKc_CDK8 Catalytic do 96.8 0.00099 2.2E-08 56.4 3.0 58 8-72 70-136 (317)
81 cd00192 PTKc Catalytic domain 96.8 0.00092 2E-08 53.7 2.6 56 10-72 68-133 (262)
82 PTZ00263 protein kinase A cata 96.8 0.0011 2.4E-08 57.2 3.2 57 9-72 89-146 (329)
83 cd05614 STKc_MSK2_N N-terminal 96.8 0.0012 2.5E-08 56.7 3.4 57 9-72 76-133 (332)
84 cd05570 STKc_PKC Catalytic dom 96.8 0.0011 2.4E-08 56.9 3.2 57 9-72 67-124 (318)
85 cd05603 STKc_SGK2 Catalytic do 96.8 0.0011 2.3E-08 56.7 3.1 57 9-72 67-124 (321)
86 cd05582 STKc_RSK_N N-terminal 96.8 0.0011 2.4E-08 56.6 3.1 57 9-72 69-126 (318)
87 cd07873 STKc_PCTAIRE1 Catalyti 96.8 0.0011 2.3E-08 55.9 2.9 56 10-72 76-132 (301)
88 cd07848 STKc_CDKL5 Catalytic d 96.7 0.0012 2.6E-08 54.8 3.2 57 9-72 71-128 (287)
89 cd05581 STKc_PDK1 Catalytic do 96.7 0.0013 2.9E-08 53.7 3.4 57 9-72 73-130 (280)
90 cd05037 PTK_Jak_rpt1 Pseudokin 96.7 0.0011 2.4E-08 53.7 2.7 55 11-72 73-129 (259)
91 cd05113 PTKc_Btk_Bmx Catalytic 96.7 0.0012 2.6E-08 54.3 2.9 56 10-72 71-128 (256)
92 cd05604 STKc_SGK3 Catalytic do 96.7 0.0012 2.7E-08 56.6 3.1 57 9-72 67-124 (325)
93 cd07839 STKc_CDK5 Catalytic do 96.7 0.0012 2.7E-08 54.5 3.0 57 9-72 70-127 (284)
94 cd05579 STKc_MAST_like Catalyt 96.7 0.0015 3.3E-08 52.6 3.5 57 9-72 64-121 (265)
95 cd05077 PTK_Jak1_rpt1 Pseudoki 96.7 0.001 2.2E-08 55.2 2.4 57 9-72 75-133 (262)
96 cd05596 STKc_ROCK Catalytic do 96.7 0.0012 2.6E-08 58.3 3.0 56 9-72 114-170 (370)
97 cd07863 STKc_CDK4 Catalytic do 96.7 0.0014 3.1E-08 54.3 3.2 56 10-72 79-136 (288)
98 cd05576 STKc_RPK118_like Catal 96.7 0.0014 3.1E-08 53.5 3.1 57 9-72 56-113 (237)
99 cd05609 STKc_MAST Catalytic do 96.7 0.0016 3.6E-08 55.0 3.6 57 9-72 72-129 (305)
100 cd05622 STKc_ROCK1 Catalytic d 96.7 0.0011 2.3E-08 58.7 2.6 56 9-72 114-170 (371)
101 PTZ00036 glycogen synthase kin 96.7 0.0016 3.4E-08 59.4 3.6 80 10-104 139-222 (440)
102 cd05065 PTKc_EphR_B Catalytic 96.7 0.0014 3.1E-08 53.9 3.0 57 9-72 76-134 (269)
103 cd05607 STKc_GRK7 Catalytic do 96.7 0.0013 2.8E-08 54.9 2.8 57 9-72 64-123 (277)
104 cd05036 PTKc_ALK_LTK Catalytic 96.7 0.0013 2.8E-08 54.6 2.8 57 9-72 80-144 (277)
105 cd05621 STKc_ROCK2 Catalytic d 96.6 0.0013 2.7E-08 58.4 2.8 57 8-72 113-170 (370)
106 cd07858 STKc_TEY_MAPK_plant Ca 96.6 0.0012 2.6E-08 57.0 2.5 55 11-72 82-136 (337)
107 cd05608 STKc_GRK1 Catalytic do 96.6 0.0018 4E-08 54.1 3.6 57 9-72 64-125 (280)
108 PF00069 Pkinase: Protein kina 96.6 0.0011 2.3E-08 53.7 2.0 56 10-72 70-126 (260)
109 cd05116 PTKc_Syk Catalytic dom 96.6 0.0014 3E-08 53.7 2.7 56 10-72 67-123 (257)
110 cd05631 STKc_GRK4 Catalytic do 96.6 0.0015 3.3E-08 54.8 2.9 57 9-72 71-130 (285)
111 PHA03211 serine/threonine kina 96.6 0.0013 2.9E-08 60.9 2.8 56 10-72 232-288 (461)
112 cd06650 PKc_MEK1 Catalytic dom 96.6 0.0015 3.3E-08 56.5 2.8 57 10-72 75-132 (333)
113 cd05056 PTKc_FAK Catalytic dom 96.6 0.0016 3.5E-08 53.6 2.8 56 10-72 78-135 (270)
114 cd05052 PTKc_Abl Catalytic dom 96.6 0.0015 3.2E-08 53.7 2.6 57 9-72 73-132 (263)
115 cd08227 PK_STRAD_alpha Pseudok 96.6 0.0016 3.5E-08 55.8 2.8 56 10-72 71-129 (327)
116 cd05085 PTKc_Fer Catalytic dom 96.6 0.0017 3.7E-08 52.5 2.9 57 9-72 63-121 (250)
117 PTZ00024 cyclin-dependent prot 96.6 0.0019 4.1E-08 55.3 3.2 57 9-72 91-147 (335)
118 cd05584 STKc_p70S6K Catalytic 96.6 0.0019 4.1E-08 55.5 3.2 57 9-72 71-128 (323)
119 cd05033 PTKc_EphR Catalytic do 96.5 0.002 4.4E-08 52.9 3.1 57 9-72 76-134 (266)
120 cd05114 PTKc_Tec_Rlk Catalytic 96.5 0.0022 4.9E-08 52.3 3.3 57 9-72 70-128 (256)
121 cd07853 STKc_NLK Catalytic dom 96.5 0.0016 3.4E-08 57.1 2.6 54 12-72 78-131 (372)
122 cd06611 STKc_SLK_like Catalyti 96.5 0.0023 5E-08 52.9 3.4 57 9-72 73-131 (280)
123 cd05606 STKc_beta_ARK Catalyti 96.5 0.0019 4.2E-08 53.9 3.0 57 9-72 68-125 (278)
124 KOG0616|consensus 96.5 0.0022 4.8E-08 57.7 3.4 59 7-72 113-172 (355)
125 cd05633 STKc_GRK3 Catalytic do 96.5 0.0022 4.8E-08 53.7 3.3 56 10-72 69-125 (279)
126 cd05070 PTKc_Fyn_Yrk Catalytic 96.5 0.0019 4.2E-08 52.8 2.7 57 9-72 71-130 (260)
127 cd05630 STKc_GRK6 Catalytic do 96.5 0.002 4.3E-08 54.2 2.7 56 10-72 72-130 (285)
128 KOG0615|consensus 96.5 0.002 4.4E-08 60.0 3.0 57 9-72 247-304 (475)
129 cd06628 STKc_MAPKKK_Byr2_like 96.5 0.0023 5.1E-08 52.3 3.1 57 9-72 77-134 (267)
130 cd05068 PTKc_Frk_like Catalyti 96.5 0.0018 3.9E-08 53.0 2.3 57 9-72 72-131 (261)
131 KOG0594|consensus 96.4 0.0019 4.1E-08 58.2 2.5 77 12-104 91-171 (323)
132 cd07867 STKc_CDC2L6 Catalytic 96.4 0.002 4.3E-08 54.3 2.5 58 8-72 70-136 (317)
133 cd07842 STKc_CDK8_like Catalyt 96.4 0.0022 4.8E-08 53.7 2.7 62 4-72 70-136 (316)
134 cd07870 STKc_PFTAIRE2 Catalyti 96.4 0.0029 6.2E-08 52.8 3.4 57 9-72 74-131 (291)
135 cd06646 STKc_MAP4K5 Catalytic 96.4 0.003 6.5E-08 51.8 3.4 57 9-72 77-134 (267)
136 cd06618 PKc_MKK7 Catalytic dom 96.4 0.0025 5.4E-08 53.5 3.0 57 10-72 86-143 (296)
137 cd07840 STKc_CDK9_like Catalyt 96.4 0.0024 5.3E-08 52.3 2.8 56 10-72 72-128 (287)
138 cd07829 STKc_CDK_like Catalyti 96.4 0.0028 6E-08 52.0 3.1 56 10-72 70-126 (282)
139 cd05611 STKc_Rim15_like Cataly 96.4 0.0032 6.9E-08 51.4 3.4 57 9-72 68-125 (260)
140 cd06658 STKc_PAK5 Catalytic do 96.4 0.0027 5.9E-08 53.6 3.0 56 9-72 90-146 (292)
141 cd05051 PTKc_DDR Catalytic dom 96.4 0.0032 6.9E-08 52.4 3.3 56 10-72 91-158 (296)
142 cd08529 STKc_FA2-like Catalyti 96.4 0.0035 7.5E-08 50.7 3.4 57 9-72 70-129 (256)
143 PLN00009 cyclin-dependent kina 96.4 0.0026 5.6E-08 53.1 2.7 57 9-72 72-130 (294)
144 cd05109 PTKc_HER2 Catalytic do 96.4 0.0024 5.2E-08 52.9 2.5 55 11-72 81-137 (279)
145 cd05145 RIO1_like RIO kinase f 96.3 0.0019 4E-08 52.2 1.7 81 13-110 92-174 (190)
146 cd06639 STKc_myosinIIIB Cataly 96.3 0.0033 7.1E-08 52.4 3.2 56 10-72 96-156 (291)
147 cd06652 STKc_MEKK2 Catalytic d 96.3 0.0034 7.4E-08 51.5 3.2 56 10-72 78-134 (265)
148 cd05123 STKc_AGC Catalytic dom 96.3 0.0035 7.6E-08 50.5 3.2 57 9-72 64-121 (250)
149 cd05083 PTKc_Chk Catalytic dom 96.3 0.0029 6.4E-08 51.5 2.7 55 11-72 71-128 (254)
150 cd05072 PTKc_Lyn Catalytic dom 96.3 0.0035 7.6E-08 51.2 3.2 57 9-72 72-131 (261)
151 cd07880 STKc_p38gamma_MAPK12 C 96.3 0.0028 6E-08 55.0 2.7 54 11-72 93-146 (343)
152 cd05094 PTKc_TrkC Catalytic do 96.3 0.0031 6.8E-08 52.8 2.9 57 9-72 78-151 (291)
153 cd07837 STKc_CdkB_plant Cataly 96.2 0.0038 8.1E-08 51.9 3.1 57 9-72 77-138 (295)
154 cd05088 PTKc_Tie2 Catalytic do 96.2 0.0038 8.2E-08 52.9 3.2 57 9-72 79-152 (303)
155 cd06629 STKc_MAPKKK_Bck1_like 96.2 0.0036 7.7E-08 51.4 2.8 57 9-72 79-136 (272)
156 cd05067 PTKc_Lck_Blk Catalytic 96.2 0.0033 7.1E-08 51.4 2.6 57 9-72 71-130 (260)
157 cd05063 PTKc_EphR_A2 Catalytic 96.2 0.0049 1.1E-07 50.5 3.4 57 9-72 77-135 (268)
158 cd05578 STKc_Yank1 Catalytic d 96.2 0.0049 1.1E-07 50.2 3.4 57 9-72 71-128 (258)
159 cd06617 PKc_MKK3_6 Catalytic d 96.2 0.0032 7E-08 51.9 2.3 57 10-72 72-132 (283)
160 cd05069 PTKc_Yes Catalytic dom 96.2 0.0035 7.5E-08 51.4 2.5 57 9-72 71-130 (260)
161 cd05082 PTKc_Csk Catalytic dom 96.2 0.0042 9.1E-08 50.7 3.0 56 10-72 72-130 (256)
162 cd07866 STKc_BUR1 Catalytic do 96.2 0.0043 9.3E-08 51.7 3.1 56 10-72 87-143 (311)
163 cd07849 STKc_ERK1_2_like Catal 96.2 0.004 8.7E-08 53.5 3.0 56 9-72 79-134 (336)
164 cd05042 PTKc_Aatyk Catalytic d 96.1 0.0048 1E-07 50.7 3.2 57 9-72 66-128 (269)
165 KOG0671|consensus 96.1 0.0025 5.5E-08 58.7 1.7 51 15-72 168-220 (415)
166 cd07834 STKc_MAPK Catalytic do 96.1 0.0036 7.7E-08 53.3 2.5 55 11-72 77-131 (330)
167 cd05632 STKc_GRK5 Catalytic do 96.1 0.0047 1E-07 51.8 3.2 57 9-72 71-130 (285)
168 cd05112 PTKc_Itk Catalytic dom 96.1 0.0053 1.2E-07 49.8 3.4 57 9-72 70-128 (256)
169 cd05098 PTKc_FGFR1 Catalytic d 96.1 0.0055 1.2E-07 51.8 3.6 57 9-72 95-168 (307)
170 cd07835 STKc_CDK1_like Catalyt 96.1 0.0048 1E-07 50.9 3.2 57 9-72 69-127 (283)
171 cd06620 PKc_MAPKK_Byr1_like Ca 96.1 0.0052 1.1E-07 51.1 3.4 57 10-72 75-132 (284)
172 cd06651 STKc_MEKK3 Catalytic d 96.1 0.005 1.1E-07 50.6 3.2 60 6-72 74-134 (266)
173 cd05060 PTKc_Syk_like Catalyti 96.1 0.0043 9.2E-08 50.7 2.6 56 10-72 67-123 (257)
174 KOG0669|consensus 96.1 0.0032 6.9E-08 56.1 2.0 79 13-108 99-179 (376)
175 cd06649 PKc_MEK2 Catalytic dom 96.1 0.0039 8.5E-08 53.7 2.5 57 10-72 75-132 (331)
176 cd05093 PTKc_TrkB Catalytic do 96.1 0.0046 1E-07 51.7 2.9 57 9-72 78-148 (288)
177 cd08220 STKc_Nek8 Catalytic do 96.1 0.0053 1.2E-07 49.6 3.1 57 9-72 70-129 (256)
178 cd05118 STKc_CMGC Catalytic do 96.1 0.0049 1.1E-07 50.6 2.9 57 9-72 69-126 (283)
179 cd08223 STKc_Nek4 Catalytic do 96.1 0.0054 1.2E-07 49.7 3.1 56 10-72 72-130 (257)
180 KOG0660|consensus 96.1 0.0019 4.2E-08 58.7 0.5 103 12-131 100-213 (359)
181 cd05046 PTK_CCK4 Pseudokinase 96.0 0.0054 1.2E-07 50.5 3.1 57 9-72 79-145 (275)
182 cd06615 PKc_MEK Catalytic doma 96.0 0.0046 9.9E-08 52.5 2.7 57 10-72 71-128 (308)
183 cd07860 STKc_CDK2_3 Catalytic 96.0 0.0055 1.2E-07 50.6 3.0 57 9-72 70-128 (284)
184 cd07852 STKc_MAPK15 Catalytic 96.0 0.0054 1.2E-07 52.7 3.1 58 7-72 78-135 (337)
185 cd08218 STKc_Nek1 Catalytic do 96.0 0.006 1.3E-07 49.5 3.1 57 9-72 70-129 (256)
186 cd06621 PKc_MAPKK_Pek1_like Ca 96.0 0.0062 1.3E-07 50.9 3.3 57 9-72 72-133 (287)
187 cd06606 STKc_MAPKKK Catalytic 96.0 0.0073 1.6E-07 48.1 3.5 56 10-72 73-129 (260)
188 cd06616 PKc_MKK4 Catalytic dom 96.0 0.0056 1.2E-07 50.8 2.8 57 10-72 75-136 (288)
189 cd06653 STKc_MEKK3_like_1 Cata 96.0 0.0065 1.4E-07 49.9 3.2 56 10-72 78-134 (264)
190 cd06643 STKc_SLK Catalytic dom 95.9 0.0059 1.3E-07 50.6 2.9 56 10-72 74-131 (282)
191 cd06633 STKc_TAO3 Catalytic do 95.9 0.0065 1.4E-07 51.8 3.2 57 9-72 92-149 (313)
192 cd07876 STKc_JNK2 Catalytic do 95.9 0.0057 1.2E-07 53.2 2.9 53 11-72 99-151 (359)
193 KOG1290|consensus 95.9 0.006 1.3E-07 58.0 3.2 59 8-72 156-216 (590)
194 cd05034 PTKc_Src_like Catalyti 95.9 0.0067 1.4E-07 49.4 3.1 56 10-72 73-131 (261)
195 cd08226 PK_STRAD_beta Pseudoki 95.9 0.0059 1.3E-07 52.3 2.9 56 10-72 71-129 (328)
196 cd06636 STKc_MAP4K4_6 Catalyti 95.9 0.0082 1.8E-07 49.7 3.6 56 10-72 91-149 (282)
197 smart00219 TyrKc Tyrosine kina 95.9 0.0058 1.3E-07 49.2 2.6 55 11-72 74-131 (258)
198 cd06637 STKc_TNIK Catalytic do 95.9 0.0079 1.7E-07 49.3 3.4 55 11-72 82-139 (272)
199 cd05572 STKc_cGK_PKG Catalytic 95.9 0.007 1.5E-07 49.4 3.1 57 9-72 64-121 (262)
200 cd05577 STKc_GRK Catalytic dom 95.9 0.0079 1.7E-07 49.9 3.4 56 10-72 65-123 (277)
201 PTZ00267 NIMA-related protein 95.9 0.0056 1.2E-07 56.2 2.7 56 10-72 137-197 (478)
202 cd05574 STKc_phototropin_like 95.9 0.007 1.5E-07 51.1 3.1 57 9-72 72-131 (316)
203 KOG0659|consensus 95.9 0.0019 4.1E-08 57.4 -0.4 104 13-132 76-188 (318)
204 cd06634 STKc_TAO2 Catalytic do 95.9 0.0082 1.8E-07 51.0 3.5 56 10-72 87-143 (308)
205 cd06622 PKc_MAPKK_PBS2_like Ca 95.9 0.0062 1.3E-07 50.5 2.7 57 10-72 71-131 (286)
206 cd06631 STKc_YSK4 Catalytic do 95.8 0.0089 1.9E-07 48.9 3.6 56 10-72 74-130 (265)
207 KOG0595|consensus 95.8 0.0066 1.4E-07 56.3 3.0 82 9-105 80-167 (429)
208 cd06635 STKc_TAO1 Catalytic do 95.8 0.0084 1.8E-07 51.1 3.2 56 10-72 97-153 (317)
209 cd05080 PTKc_Tyk2_rpt2 Catalyt 95.8 0.0083 1.8E-07 49.8 3.1 57 8-72 78-135 (283)
210 cd05101 PTKc_FGFR2 Catalytic d 95.8 0.0072 1.6E-07 50.9 2.7 56 10-72 93-165 (304)
211 cd06638 STKc_myosinIIIA Cataly 95.7 0.0097 2.1E-07 49.2 3.4 58 8-72 90-152 (286)
212 cd05047 PTKc_Tie Catalytic dom 95.7 0.007 1.5E-07 50.0 2.6 56 10-72 68-140 (270)
213 cd05583 STKc_MSK_N N-terminal 95.7 0.0092 2E-07 49.6 3.3 57 9-72 76-133 (288)
214 cd08221 STKc_Nek9 Catalytic do 95.7 0.01 2.2E-07 48.1 3.4 57 9-72 70-129 (256)
215 cd06632 STKc_MEKK1_plant Catal 95.7 0.011 2.3E-07 47.7 3.5 57 9-72 73-130 (258)
216 cd05055 PTKc_PDGFR Catalytic d 95.7 0.01 2.3E-07 50.3 3.5 57 9-72 110-169 (302)
217 cd08217 STKc_Nek2 Catalytic do 95.7 0.009 1.9E-07 48.1 3.0 57 9-72 72-138 (265)
218 cd05102 PTKc_VEGFR3 Catalytic 95.7 0.0072 1.6E-07 51.8 2.5 32 34-72 171-202 (338)
219 cd07875 STKc_JNK1 Catalytic do 95.7 0.0076 1.6E-07 52.5 2.7 53 11-72 102-154 (364)
220 cd05589 STKc_PKN Catalytic dom 95.7 0.008 1.7E-07 51.5 2.7 56 9-72 73-129 (324)
221 cd06613 STKc_MAP4K3_like Catal 95.7 0.0098 2.1E-07 48.2 3.0 56 10-72 72-129 (262)
222 cd07854 STKc_MAPK4_6 Catalytic 95.6 0.01 2.3E-07 51.3 3.3 54 11-72 89-142 (342)
223 cd05095 PTKc_DDR2 Catalytic do 95.6 0.0092 2E-07 50.1 2.8 56 10-72 91-158 (296)
224 cd05039 PTKc_Csk_like Catalyti 95.6 0.012 2.7E-07 47.8 3.5 56 10-72 72-130 (256)
225 KOG0667|consensus 95.6 0.0062 1.3E-07 58.7 1.9 55 11-72 261-317 (586)
226 KOG0198|consensus 95.6 0.011 2.5E-07 52.8 3.5 64 2-72 80-145 (313)
227 cd05071 PTKc_Src Catalytic dom 95.6 0.0098 2.1E-07 49.0 2.9 56 10-72 72-130 (262)
228 cd07847 STKc_CDKL1_4 Catalytic 95.6 0.01 2.2E-07 48.8 3.0 57 9-72 71-128 (286)
229 cd05044 PTKc_c-ros Catalytic d 95.6 0.011 2.5E-07 48.2 3.2 57 9-72 70-134 (269)
230 cd06625 STKc_MEKK3_like Cataly 95.6 0.011 2.3E-07 48.1 3.0 56 10-72 76-132 (263)
231 cd06917 STKc_NAK1_like Catalyt 95.6 0.011 2.4E-07 48.7 3.1 56 9-72 73-129 (277)
232 cd05032 PTKc_InsR_like Catalyt 95.6 0.011 2.4E-07 48.5 3.1 57 9-72 80-147 (277)
233 cd07830 STKc_MAK_like Catalyti 95.6 0.012 2.5E-07 48.5 3.2 56 10-72 70-127 (283)
234 cd07836 STKc_Pho85 Catalytic d 95.6 0.01 2.2E-07 48.9 2.9 56 10-72 70-128 (284)
235 cd05075 PTKc_Axl Catalytic dom 95.5 0.013 2.7E-07 48.1 3.3 56 10-72 78-140 (272)
236 cd07864 STKc_CDK12 Catalytic d 95.5 0.012 2.5E-07 49.1 3.1 56 10-72 88-144 (302)
237 KOG0662|consensus 95.5 0.002 4.3E-08 55.1 -1.6 77 14-106 77-154 (292)
238 cd07874 STKc_JNK3 Catalytic do 95.5 0.0084 1.8E-07 51.9 2.2 53 11-72 95-147 (355)
239 cd05073 PTKc_Hck Catalytic dom 95.5 0.011 2.4E-07 48.4 2.9 55 11-72 73-130 (260)
240 cd07850 STKc_JNK Catalytic dom 95.5 0.01 2.3E-07 51.4 2.8 53 11-72 94-146 (353)
241 cd05099 PTKc_FGFR4 Catalytic d 95.5 0.011 2.5E-07 50.2 3.0 56 10-72 90-162 (314)
242 cd05057 PTKc_EGFR_like Catalyt 95.5 0.01 2.2E-07 49.2 2.5 55 11-72 81-137 (279)
243 cd06623 PKc_MAPKK_plant_like C 95.5 0.013 2.8E-07 47.4 3.1 57 9-72 70-128 (264)
244 cd05097 PTKc_DDR_like Catalyti 95.4 0.013 2.9E-07 49.1 3.1 57 9-72 88-157 (295)
245 cd06648 STKc_PAK_II Catalytic 95.4 0.013 2.9E-07 49.0 3.1 56 9-72 87-143 (285)
246 cd06627 STKc_Cdc7_like Catalyt 95.4 0.015 3.2E-07 46.6 3.2 56 10-72 71-127 (254)
247 cd07851 STKc_p38 Catalytic dom 95.4 0.013 2.8E-07 50.7 3.1 54 11-72 93-146 (343)
248 PHA02988 hypothetical protein; 95.4 0.013 2.9E-07 49.4 3.1 59 8-72 92-151 (283)
249 KOG0600|consensus 95.4 0.0083 1.8E-07 57.1 1.9 123 12-151 192-345 (560)
250 cd07877 STKc_p38alpha_MAPK14 C 95.4 0.011 2.4E-07 51.3 2.6 54 11-72 95-148 (345)
251 cd08216 PK_STRAD Pseudokinase 95.4 0.013 2.8E-07 49.4 2.9 57 9-72 70-129 (314)
252 cd05148 PTKc_Srm_Brk Catalytic 95.3 0.013 2.7E-07 47.8 2.7 57 9-72 73-132 (261)
253 cd05062 PTKc_IGF-1R Catalytic 95.3 0.017 3.6E-07 47.8 3.4 57 9-72 80-147 (277)
254 cd08219 STKc_Nek3 Catalytic do 95.3 0.014 3E-07 47.5 2.8 57 9-72 69-128 (255)
255 cd06605 PKc_MAPKK Catalytic do 95.3 0.012 2.6E-07 47.9 2.5 57 10-72 71-129 (265)
256 PLN00181 protein SPA1-RELATED; 95.3 0.0072 1.6E-07 59.0 1.3 54 12-72 54-108 (793)
257 cd08229 STKc_Nek7 Catalytic do 95.3 0.014 3.1E-07 47.6 2.9 57 9-72 73-134 (267)
258 cd05090 PTKc_Ror1 Catalytic do 95.3 0.017 3.8E-07 47.8 3.4 57 9-72 78-152 (283)
259 cd07861 STKc_CDK1_euk Catalyti 95.3 0.014 3.1E-07 48.1 2.8 56 10-72 71-129 (285)
260 cd05096 PTKc_DDR1 Catalytic do 95.3 0.014 3.1E-07 49.1 2.9 55 11-72 92-166 (304)
261 cd06644 STKc_STK10_LOK Catalyt 95.2 0.013 2.9E-07 48.9 2.5 56 10-72 81-138 (292)
262 cd08225 STKc_Nek5 Catalytic do 95.2 0.021 4.5E-07 46.1 3.5 57 9-72 70-129 (257)
263 cd05061 PTKc_InsR Catalytic do 95.2 0.018 3.8E-07 48.1 3.2 57 9-72 80-147 (288)
264 cd06640 STKc_MST4 Catalytic do 95.2 0.017 3.6E-07 47.9 3.0 56 9-72 73-129 (277)
265 cd05048 PTKc_Ror Catalytic Dom 95.1 0.019 4E-07 47.5 3.1 56 10-72 80-152 (283)
266 cd08224 STKc_Nek6_Nek7 Catalyt 95.1 0.019 4E-07 46.7 3.0 56 10-72 74-134 (267)
267 cd07838 STKc_CDK4_6_like Catal 95.1 0.019 4.1E-07 47.1 3.1 55 11-72 79-135 (287)
268 cd06612 STKc_MST1_2 Catalytic 95.1 0.02 4.4E-07 46.1 3.2 56 10-72 70-127 (256)
269 cd05111 PTK_HER3 Pseudokinase 95.1 0.019 4.1E-07 47.9 3.0 54 12-72 82-137 (279)
270 cd06642 STKc_STK25-YSK1 Cataly 95.1 0.015 3.4E-07 48.0 2.5 56 9-72 73-129 (277)
271 cd07856 STKc_Sty1_Hog1 Catalyt 95.1 0.018 4E-07 49.7 3.0 54 11-72 83-136 (328)
272 cd05053 PTKc_FGFR Catalytic do 95.1 0.02 4.2E-07 47.7 3.1 56 10-72 88-160 (293)
273 cd05100 PTKc_FGFR3 Catalytic d 95.1 0.019 4E-07 49.4 3.0 57 9-72 89-162 (334)
274 cd06609 STKc_MST3_like Catalyt 95.1 0.018 4E-07 47.4 2.9 56 9-72 70-126 (274)
275 cd06654 STKc_PAK1 Catalytic do 95.1 0.019 4E-07 48.5 2.9 55 10-72 89-144 (296)
276 cd05045 PTKc_RET Catalytic dom 95.0 0.024 5.2E-07 47.3 3.6 57 9-72 74-155 (290)
277 cd06624 STKc_ASK Catalytic dom 95.0 0.02 4.4E-07 47.0 2.9 57 9-72 76-136 (268)
278 cd05089 PTKc_Tie1 Catalytic do 94.9 0.022 4.7E-07 47.9 3.0 56 10-72 75-147 (297)
279 cd06614 STKc_PAK Catalytic dom 94.9 0.023 4.9E-07 47.2 3.0 56 10-72 87-144 (286)
280 cd06657 STKc_PAK4 Catalytic do 94.9 0.021 4.6E-07 48.3 2.9 56 9-72 88-144 (292)
281 cd05040 PTKc_Ack_like Catalyti 94.9 0.023 5.1E-07 46.1 3.0 55 11-72 68-125 (257)
282 PTZ00266 NIMA-related protein 94.9 0.021 4.5E-07 58.3 3.3 63 9-72 85-153 (1021)
283 cd05110 PTKc_HER4 Catalytic do 94.9 0.017 3.8E-07 48.8 2.3 54 12-72 82-137 (303)
284 cd06630 STKc_MEKK1 Catalytic d 94.9 0.027 5.8E-07 45.9 3.3 56 10-72 75-131 (268)
285 KOG0583|consensus 94.9 0.019 4E-07 52.1 2.6 78 10-103 92-171 (370)
286 cd05122 PKc_STE Catalytic doma 94.8 0.022 4.7E-07 45.2 2.7 55 11-72 70-126 (253)
287 KOG0605|consensus 94.8 0.025 5.4E-07 54.0 3.4 59 6-72 209-269 (550)
288 cd08530 STKc_CNK2-like Catalyt 94.8 0.027 5.8E-07 45.3 3.1 56 10-72 71-131 (256)
289 PHA03210 serine/threonine kina 94.7 0.019 4.2E-07 53.2 2.4 56 10-72 235-295 (501)
290 cd08215 STKc_Nek Catalytic dom 94.7 0.028 6E-07 45.0 3.0 56 10-72 71-131 (258)
291 cd05087 PTKc_Aatyk1_Aatyk3 Cat 94.7 0.026 5.6E-07 46.4 3.0 57 9-72 66-128 (269)
292 cd05043 PTK_Ryk Pseudokinase d 94.7 0.024 5.3E-07 46.8 2.8 56 10-72 81-145 (280)
293 cd05092 PTKc_TrkA Catalytic do 94.7 0.03 6.5E-07 46.6 3.3 56 10-72 79-150 (280)
294 cd05104 PTKc_Kit Catalytic dom 94.7 0.021 4.5E-07 50.5 2.5 33 33-72 210-242 (375)
295 cd06607 STKc_TAO Catalytic dom 94.7 0.02 4.3E-07 48.4 2.2 56 10-72 87-143 (307)
296 cd06659 STKc_PAK6 Catalytic do 94.7 0.025 5.4E-07 47.9 2.8 55 10-72 90-145 (297)
297 cd05106 PTKc_CSF-1R Catalytic 94.6 0.019 4.1E-07 50.9 1.9 32 34-72 209-240 (374)
298 cd08528 STKc_Nek10 Catalytic d 94.5 0.025 5.3E-07 46.4 2.3 58 9-72 80-142 (269)
299 cd07833 STKc_CDKL Catalytic do 94.5 0.035 7.6E-07 45.7 3.1 56 10-72 72-128 (288)
300 cd08228 STKc_Nek6 Catalytic do 94.4 0.034 7.4E-07 45.4 3.0 56 10-72 74-134 (267)
301 cd07879 STKc_p38delta_MAPK13 C 94.4 0.032 7E-07 48.2 3.0 52 12-72 94-145 (342)
302 cd05086 PTKc_Aatyk2 Catalytic 94.4 0.033 7.2E-07 46.0 2.9 56 10-72 67-127 (268)
303 KOG0658|consensus 94.4 0.015 3.1E-07 53.2 0.7 57 10-73 94-154 (364)
304 cd06610 STKc_OSR1_SPAK Catalyt 94.4 0.039 8.5E-07 44.7 3.1 57 9-72 70-130 (267)
305 cd05049 PTKc_Trk Catalytic dom 94.3 0.035 7.7E-07 45.6 2.8 56 10-72 80-150 (280)
306 cd05613 STKc_MSK1_N N-terminal 94.3 0.042 9.1E-07 45.7 3.2 56 10-72 77-133 (290)
307 cd05108 PTKc_EGFR Catalytic do 94.3 0.039 8.4E-07 46.9 3.0 53 13-72 83-137 (316)
308 KOG0589|consensus 94.3 0.029 6.3E-07 52.3 2.4 82 9-107 75-160 (426)
309 cd06656 STKc_PAK3 Catalytic do 94.2 0.042 9E-07 46.4 3.0 56 9-72 87-143 (297)
310 cd07846 STKc_CDKL2_3 Catalytic 94.1 0.055 1.2E-06 44.6 3.6 57 9-72 71-128 (286)
311 PTZ00283 serine/threonine prot 94.1 0.042 9E-07 51.1 3.1 54 12-72 113-171 (496)
312 cd00180 PKc Catalytic domain o 94.1 0.051 1.1E-06 41.1 3.0 55 11-72 64-120 (215)
313 cd06626 STKc_MEKK4 Catalytic d 93.9 0.068 1.5E-06 43.3 3.6 57 9-72 70-127 (264)
314 cd05058 PTKc_Met_Ron Catalytic 93.8 0.059 1.3E-06 43.8 3.1 56 10-72 69-126 (262)
315 cd06608 STKc_myosinIII_like Ca 93.7 0.072 1.6E-06 43.2 3.5 57 9-72 80-141 (275)
316 cd06655 STKc_PAK2 Catalytic do 93.5 0.067 1.4E-06 45.2 3.1 56 9-72 87-143 (296)
317 smart00220 S_TKc Serine/Threon 93.5 0.074 1.6E-06 41.6 3.1 56 10-72 59-115 (244)
318 KOG0192|consensus 93.3 0.049 1.1E-06 49.4 2.1 53 13-72 115-171 (362)
319 cd05105 PTKc_PDGFR_alpha Catal 93.3 0.065 1.4E-06 48.4 2.9 33 33-72 233-265 (400)
320 cd06641 STKc_MST3 Catalytic do 93.2 0.054 1.2E-06 44.9 2.1 56 9-72 73-129 (277)
321 cd05050 PTKc_Musk Catalytic do 93.1 0.088 1.9E-06 43.7 3.1 56 10-72 80-158 (288)
322 KOG0984|consensus 93.0 0.081 1.7E-06 46.1 2.9 53 14-72 121-177 (282)
323 PRK13184 pknD serine/threonine 92.9 0.079 1.7E-06 53.8 3.1 57 9-72 73-141 (932)
324 KOG0614|consensus 92.8 0.041 8.9E-07 53.0 0.9 60 6-72 488-548 (732)
325 cd05103 PTKc_VEGFR2 Catalytic 92.8 0.084 1.8E-06 45.8 2.6 32 34-72 176-207 (343)
326 KOG0575|consensus 92.6 0.098 2.1E-06 50.6 3.1 57 9-72 89-146 (592)
327 KOG0592|consensus 92.6 0.083 1.8E-06 50.9 2.6 75 14-105 150-226 (604)
328 KOG0596|consensus 92.6 0.11 2.4E-06 50.3 3.4 80 9-105 431-511 (677)
329 smart00090 RIO RIO-like kinase 92.5 0.038 8.3E-07 46.8 0.1 78 13-107 123-202 (237)
330 cd05035 PTKc_Axl_like Catalyti 92.4 0.12 2.6E-06 42.0 3.0 57 9-72 78-141 (273)
331 PRK14879 serine/threonine prot 92.4 0.097 2.1E-06 41.8 2.4 51 11-72 72-123 (211)
332 cd08222 STKc_Nek11 Catalytic d 92.4 0.13 2.9E-06 41.8 3.2 56 10-72 74-134 (260)
333 KOG0591|consensus 92.4 0.044 9.5E-07 49.5 0.4 134 13-164 95-263 (375)
334 cd05054 PTKc_VEGFR Catalytic d 92.3 0.11 2.5E-06 45.1 2.9 33 33-72 169-201 (337)
335 cd06647 STKc_PAK_I Catalytic d 92.2 0.1 2.2E-06 43.9 2.4 56 9-72 87-143 (293)
336 KOG0598|consensus 92.1 0.14 3.1E-06 46.8 3.4 57 8-72 95-153 (357)
337 cd05091 PTKc_Ror2 Catalytic do 92.1 0.15 3.2E-06 42.1 3.2 55 11-72 81-152 (283)
338 PRK10345 hypothetical protein; 92.0 0.12 2.5E-06 43.4 2.4 60 3-72 68-133 (210)
339 cd06619 PKc_MKK5 Catalytic dom 91.8 0.1 2.2E-06 43.3 2.0 53 10-72 71-123 (279)
340 KOG1989|consensus 91.7 0.12 2.6E-06 51.3 2.6 52 13-71 117-173 (738)
341 PRK01723 3-deoxy-D-manno-octul 91.7 0.12 2.6E-06 43.7 2.3 70 14-105 122-194 (239)
342 PF07714 Pkinase_Tyr: Protein 91.6 0.12 2.6E-06 42.7 2.2 53 13-72 76-131 (259)
343 PLN00113 leucine-rich repeat r 91.5 0.11 2.3E-06 51.5 2.0 56 10-72 755-811 (968)
344 PLN00034 mitogen-activated pro 91.2 0.12 2.6E-06 44.9 1.8 52 10-72 144-196 (353)
345 PLN03225 Serine/threonine-prot 91.1 0.15 3.2E-06 48.6 2.4 57 9-72 206-283 (566)
346 KOG0664|consensus 90.6 0.06 1.3E-06 48.7 -0.6 102 14-131 133-243 (449)
347 KOG0574|consensus 90.5 0.3 6.4E-06 44.9 3.6 54 12-72 102-157 (502)
348 KOG0597|consensus 90.0 0.21 4.6E-06 48.9 2.5 57 10-73 73-129 (808)
349 KOG0610|consensus 89.9 0.3 6.4E-06 45.8 3.3 59 7-72 146-207 (459)
350 smart00221 STYKc Protein kinas 89.9 0.32 7E-06 37.9 3.1 56 10-72 69-126 (225)
351 KOG0666|consensus 89.6 0.081 1.7E-06 48.5 -0.6 104 11-131 101-225 (438)
352 TIGR03724 arch_bud32 Kae1-asso 89.1 0.2 4.3E-06 39.7 1.4 48 11-72 70-118 (199)
353 KOG0599|consensus 89.0 0.23 5E-06 45.0 1.8 58 8-72 93-151 (411)
354 KOG0612|consensus 88.7 0.31 6.6E-06 50.6 2.6 59 6-72 143-203 (1317)
355 KOG0032|consensus 86.4 0.37 8.1E-06 44.0 1.5 89 9-110 107-196 (382)
356 PRK09605 bifunctional UGMP fam 86.3 0.53 1.1E-05 44.2 2.6 67 11-102 409-476 (535)
357 PRK09188 serine/threonine prot 85.8 0.44 9.5E-06 43.4 1.7 72 12-106 92-165 (365)
358 cd05074 PTKc_Tyro3 Catalytic d 85.8 0.64 1.4E-05 37.9 2.5 52 14-72 83-141 (273)
359 KOG0194|consensus 84.9 0.84 1.8E-05 43.3 3.1 50 14-70 237-288 (474)
360 KOG0033|consensus 84.8 0.45 9.8E-06 42.6 1.3 58 7-72 79-138 (355)
361 KOG1027|consensus 84.5 0.64 1.4E-05 46.9 2.3 58 9-73 574-635 (903)
362 KOG0593|consensus 84.4 0.69 1.5E-05 42.3 2.3 74 14-104 77-152 (396)
363 KOG0578|consensus 84.4 0.52 1.1E-05 45.4 1.5 51 13-71 345-396 (550)
364 KOG1167|consensus 82.4 0.65 1.4E-05 43.3 1.3 83 8-110 105-190 (418)
365 PF09763 Sec3_C: Exocyst compl 82.2 8.4 0.00018 37.7 8.9 66 109-174 10-76 (701)
366 PLN03224 probable serine/threo 81.9 1.2 2.6E-05 42.3 2.9 55 11-72 258-337 (507)
367 KOG0577|consensus 80.9 0.75 1.6E-05 45.5 1.2 61 5-72 89-154 (948)
368 KOG0665|consensus 80.5 0.42 9.2E-06 43.7 -0.6 50 14-72 97-146 (369)
369 COG0515 SPS1 Serine/threonine 79.7 1.9 4E-05 33.8 2.9 76 13-104 73-153 (384)
370 PF05667 DUF812: Protein of un 79.1 50 0.0011 32.3 13.0 100 46-155 492-591 (594)
371 cd05144 RIO2_C RIO kinase fami 78.8 1 2.2E-05 36.1 1.2 49 11-72 104-153 (198)
372 KOG0193|consensus 78.6 0.88 1.9E-05 44.6 0.9 51 15-72 463-516 (678)
373 smart00750 KIND kinase non-cat 78.1 2 4.3E-05 32.9 2.6 34 23-57 2-36 (176)
374 KOG0580|consensus 77.2 1.9 4.1E-05 38.2 2.5 53 13-72 97-152 (281)
375 cd05107 PTKc_PDGFR_beta Cataly 76.3 0.87 1.9E-05 41.2 0.1 54 12-72 213-267 (401)
376 KOG0604|consensus 76.3 3 6.5E-05 38.3 3.5 59 7-72 128-189 (400)
377 cd05119 RIO RIO kinase family, 74.2 2 4.3E-05 33.5 1.6 77 11-109 88-170 (187)
378 KOG0582|consensus 73.8 1.9 4.2E-05 41.0 1.7 53 13-72 99-154 (516)
379 KOG1006|consensus 73.7 2.1 4.5E-05 38.8 1.8 54 13-72 138-196 (361)
380 KOG4257|consensus 73.3 3.6 7.9E-05 41.1 3.5 104 13-132 465-578 (974)
381 KOG4250|consensus 73.0 2.9 6.3E-05 41.6 2.8 79 10-107 89-178 (732)
382 KOG0983|consensus 71.9 0.9 2E-05 41.2 -0.9 54 13-72 166-220 (391)
383 KOG4236|consensus 71.7 2.4 5.2E-05 41.6 1.9 55 11-72 636-692 (888)
384 KOG4158|consensus 70.8 3.3 7.1E-05 39.5 2.5 54 10-71 315-368 (598)
385 PF10454 DUF2458: Protein of u 70.1 37 0.00081 27.3 8.2 53 89-145 65-118 (150)
386 cd07665 BAR_SNX1 The Bin/Amphi 69.9 32 0.00069 29.7 8.2 76 91-166 30-112 (234)
387 KOG1187|consensus 68.1 3.1 6.7E-05 37.6 1.7 57 12-72 146-205 (361)
388 KOG0197|consensus 66.9 5.4 0.00012 37.9 3.1 73 14-102 277-352 (468)
389 KOG0611|consensus 64.9 3 6.6E-05 39.8 1.0 85 9-110 124-210 (668)
390 KOG0603|consensus 64.7 4 8.6E-05 40.0 1.8 55 9-72 387-443 (612)
391 cd07664 BAR_SNX2 The Bin/Amphi 64.6 42 0.00091 28.9 7.9 75 92-166 31-112 (234)
392 KOG0586|consensus 64.2 5.7 0.00012 38.8 2.8 53 13-72 130-183 (596)
393 KOG1035|consensus 63.8 3.7 8.1E-05 43.2 1.5 55 11-72 669-725 (1351)
394 KOG4279|consensus 62.8 7 0.00015 39.8 3.1 60 3-71 639-702 (1226)
395 PF04912 Dynamitin: Dynamitin 62.8 1.2E+02 0.0026 27.6 12.2 61 99-159 324-385 (388)
396 KOG0608|consensus 62.7 5.7 0.00012 39.9 2.5 56 9-72 700-757 (1034)
397 KOG2345|consensus 61.6 7.5 0.00016 34.8 2.8 57 9-72 94-157 (302)
398 KOG0585|consensus 61.3 3.3 7.2E-05 39.9 0.6 76 9-103 181-260 (576)
399 KOG0668|consensus 60.7 3.2 6.9E-05 37.0 0.3 44 45-107 139-187 (338)
400 KOG4721|consensus 58.6 9.2 0.0002 38.0 3.1 53 12-71 186-239 (904)
401 cd05146 RIO3_euk RIO kinase fa 58.5 4.4 9.5E-05 33.9 0.8 85 12-115 98-186 (197)
402 cd07623 BAR_SNX1_2 The Bin/Amp 58.3 1.1E+02 0.0023 25.8 9.2 77 91-167 20-103 (224)
403 KOG2148|consensus 57.5 78 0.0017 31.9 9.1 81 91-172 180-262 (867)
404 PF10158 LOH1CR12: Tumour supp 57.2 95 0.0021 24.5 12.1 88 84-171 29-116 (131)
405 cd07598 BAR_FAM92 The Bin/Amph 56.4 57 0.0012 27.6 7.2 56 109-166 16-71 (211)
406 cd07627 BAR_Vps5p The Bin/Amph 54.6 1.3E+02 0.0027 25.1 9.9 76 92-167 13-95 (216)
407 PRK12274 serine/threonine prot 54.3 8.1 0.00017 33.1 1.7 71 13-107 73-146 (218)
408 TIGR01982 UbiB 2-polyprenylphe 52.7 95 0.0021 28.7 8.6 51 12-72 232-285 (437)
409 PF14531 Kinase-like: Kinase-l 52.4 4.1 8.9E-05 36.2 -0.4 53 13-72 114-173 (288)
410 KOG4717|consensus 52.2 6.6 0.00014 38.6 0.9 79 13-111 92-177 (864)
411 KOG0579|consensus 51.7 16 0.00035 37.0 3.5 52 14-72 105-158 (1187)
412 KOG1095|consensus 51.4 11 0.00023 39.2 2.4 121 12-150 769-911 (1025)
413 KOG1152|consensus 50.5 7.2 0.00016 38.6 0.9 75 9-100 640-717 (772)
414 cd07665 BAR_SNX1 The Bin/Amphi 49.7 33 0.00072 29.6 4.8 41 108-148 33-73 (234)
415 KOG1166|consensus 49.5 9 0.00019 39.5 1.5 59 5-72 763-822 (974)
416 PF09325 Vps5: Vps5 C terminal 49.5 1.1E+02 0.0023 25.1 7.7 75 92-166 33-114 (236)
417 PRK10359 lipopolysaccharide co 49.5 13 0.00028 32.0 2.2 47 11-72 116-163 (232)
418 KOG0670|consensus 48.2 12 0.00026 36.8 2.0 55 11-72 507-564 (752)
419 PRK15123 lipopolysaccharide co 47.6 17 0.00037 31.6 2.7 55 11-72 108-166 (268)
420 KOG1345|consensus 46.7 9.2 0.0002 34.9 0.9 55 9-71 93-148 (378)
421 PF14662 CCDC155: Coiled-coil 44.6 2E+02 0.0043 24.5 9.2 72 94-165 5-76 (193)
422 KOG0201|consensus 43.7 7.1 0.00015 37.0 -0.2 75 15-105 88-163 (467)
423 cd07664 BAR_SNX2 The Bin/Amphi 43.4 48 0.001 28.5 4.8 41 108-148 33-73 (234)
424 cd07624 BAR_SNX7_30 The Bin/Am 43.3 72 0.0016 26.3 5.8 57 91-147 22-78 (200)
425 cd07623 BAR_SNX1_2 The Bin/Amp 42.6 1.3E+02 0.0027 25.4 7.2 60 108-168 23-82 (224)
426 KOG0607|consensus 42.2 18 0.00039 33.7 2.1 52 13-72 151-204 (463)
427 cd07630 BAR_SNX_like The Bin/A 40.0 1.9E+02 0.0041 24.1 7.8 76 92-167 13-97 (198)
428 cd07628 BAR_Atg24p The Bin/Amp 39.9 2.1E+02 0.0045 23.4 8.4 54 92-145 13-67 (185)
429 PF09177 Syntaxin-6_N: Syntaxi 39.1 1.5E+02 0.0032 21.6 6.3 57 115-171 9-68 (97)
430 KOG3091|consensus 38.1 2.2E+02 0.0047 27.6 8.6 114 45-170 390-505 (508)
431 PF05700 BCAS2: Breast carcino 38.0 2.4E+02 0.0053 23.7 8.5 14 16-29 125-138 (221)
432 cd05120 APH_ChoK_like Aminogly 36.5 9.7 0.00021 27.2 -0.4 51 11-72 66-117 (155)
433 KOG0588|consensus 35.5 18 0.00039 36.3 1.1 85 8-110 82-169 (786)
434 KOG4278|consensus 35.3 31 0.00068 34.9 2.7 65 22-102 348-414 (1157)
435 cd07627 BAR_Vps5p The Bin/Amph 35.2 1.6E+02 0.0034 24.5 6.6 56 108-164 15-70 (216)
436 PF08397 IMD: IRSp53/MIM homol 34.8 2.7E+02 0.0058 23.2 8.2 85 73-159 18-105 (219)
437 cd07666 BAR_SNX7 The Bin/Amphi 33.6 3E+02 0.0065 23.9 8.2 57 91-147 62-118 (243)
438 PF06293 Kdo: Lipopolysacchari 32.1 52 0.0011 26.8 3.2 56 10-72 89-146 (206)
439 KOG4626|consensus 31.7 93 0.002 31.5 5.2 68 92-159 380-450 (966)
440 cd07609 BAR_SIP3_fungi The Bin 31.4 3.3E+02 0.0071 23.2 8.0 114 9-142 57-171 (214)
441 KOG0694|consensus 31.0 16 0.00034 36.4 -0.1 56 8-72 439-496 (694)
442 cd00446 GrpE GrpE is the adeni 30.8 2.5E+02 0.0054 21.6 9.3 69 98-167 10-81 (137)
443 cd07666 BAR_SNX7 The Bin/Amphi 29.7 3.8E+02 0.0082 23.3 10.6 38 122-161 181-218 (243)
444 COG5114 Histone acetyltransfer 29.2 4.7E+02 0.01 24.3 9.6 51 102-152 233-288 (432)
445 COG4842 Uncharacterized protei 29.0 80 0.0017 23.2 3.4 29 119-147 48-76 (97)
446 COG3452 Predicted periplasmic 29.0 2E+02 0.0043 25.9 6.4 62 34-103 13-74 (297)
447 KOG0576|consensus 28.3 13 0.00029 37.2 -1.0 49 14-71 88-139 (829)
448 cd07663 BAR_SNX5 The Bin/Amphi 27.6 4E+02 0.0086 22.9 7.9 77 91-167 31-113 (218)
449 PRK14145 heat shock protein Gr 26.0 4E+02 0.0087 22.5 9.0 69 97-166 69-137 (196)
450 KOG1026|consensus 25.6 69 0.0015 32.5 3.2 73 13-101 564-651 (774)
451 PF08654 DASH_Dad2: DASH compl 25.4 3E+02 0.0065 20.8 8.3 43 113-155 16-59 (103)
452 cd07621 BAR_SNX5_6 The Bin/Amp 24.7 3.6E+02 0.0079 23.1 7.1 76 92-167 33-114 (219)
453 KOG0587|consensus 24.6 47 0.001 34.3 1.9 78 7-101 90-171 (953)
454 PF04799 Fzo_mitofusin: fzo-li 24.3 3.2E+02 0.0069 22.7 6.5 50 100-149 116-165 (171)
455 KOG0057|consensus 24.1 2.3E+02 0.005 28.0 6.4 52 90-141 217-268 (591)
456 KOG4645|consensus 24.1 39 0.00085 36.4 1.3 93 15-124 1311-1405(1509)
457 cd00176 SPEC Spectrin repeats, 23.8 3.3E+02 0.0072 20.7 12.3 41 44-96 31-71 (213)
458 PF02662 FlpD: Methyl-viologen 22.8 75 0.0016 24.5 2.4 22 124-145 103-124 (124)
459 PF06103 DUF948: Bacterial pro 22.5 2.9E+02 0.0062 19.5 7.3 39 108-146 44-82 (90)
460 KOG4571|consensus 21.3 2.9E+02 0.0064 24.9 6.1 21 151-171 271-291 (294)
461 COG4663 FcbT1 TRAP-type mannit 21.3 1.3E+02 0.0028 27.7 3.9 101 9-136 247-355 (363)
462 KOG4512|consensus 20.8 1.5E+02 0.0033 28.7 4.4 58 92-151 118-178 (625)
No 1
>KOG3390|consensus
Probab=100.00 E-value=1.3e-38 Score=240.52 Aligned_cols=119 Identities=54% Similarity=0.721 Sum_probs=116.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhh
Q psy13596 47 ILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQ 126 (186)
Q Consensus 47 ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKq 126 (186)
||+.|+++|+. +|..+|+ .+|+.|++|+.++..++++||++||.||+++|.||++|+.|.|.|..+++.|+||
T Consensus 1 ml~~llKEhs~-----kq~eRre--lqEK~r~EAI~aA~~l~~alVdhlN~gVaqay~Nqkrld~E~k~l~~~~A~faKQ 73 (120)
T KOG3390|consen 1 MLPFLLKEHSE-----KQSERRE--LQEKTRKEAIRAAARLADALVDHLNGGVAQAYVNQKRLDSEIKNLAITVAKFAKQ 73 (120)
T ss_pred CccHHHHHHHH-----HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999 9999999 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy13596 127 TQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALETAYEGS 172 (186)
Q Consensus 127 t~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~~v~~~~ 172 (186)
|+||+.+++.+|.+||||||||||+++||.||+.|.+|||++|++.
T Consensus 74 T~QWl~vte~~N~AlKEIGDvENW~ktiE~Dmk~It~alr~~ye~q 119 (120)
T KOG3390|consen 74 TDQWLAVTEAVNSALKEIGDVENWMKTIEFDMKKITAALRNIYEDQ 119 (120)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999864
No 2
>PF06320 GCN5L1: GCN5-like protein 1 (GCN5L1); InterPro: IPR009395 This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown [,].
Probab=100.00 E-value=2e-37 Score=240.99 Aligned_cols=121 Identities=56% Similarity=0.772 Sum_probs=116.9
Q ss_pred HHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHH
Q psy13596 51 MSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQW 130 (186)
Q Consensus 51 l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW 130 (186)
|.++|+. +|..+|+ .+++.|++|++|+.+++++|++.||.||+.+|.|+++|++|+|+|..++++|+|+|.+|
T Consensus 1 ~~keH~~-----~q~~~re--~~e~~r~ea~~s~~~l~~~l~d~ln~~v~~~~~Nqk~ie~e~k~L~~~~~~l~kqt~qw 73 (121)
T PF06320_consen 1 MVKEHQA-----RQAELRE--EQERARKEAIASAQALTNALVDHLNSRVSEAYENQKKIEKEAKQLQRNTAKLAKQTDQW 73 (121)
T ss_pred CcHHHHH-----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999 9999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Q psy13596 131 LSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALETAYEGSINENTS 178 (186)
Q Consensus 131 ~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~~v~~~~~~~~~~ 178 (186)
+++++.|+++|||||||||||++||+||++|++|||+|+++..+..+|
T Consensus 74 ~~~~~~~~~~LKEiGDveNWa~~iE~Dl~~i~~~L~~v~~~~~~~~~~ 121 (121)
T PF06320_consen 74 LKLVDSFNDALKEIGDVENWAEMIERDLRVIEETLRYVYEGSEKEQTS 121 (121)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 999999999999999999999999999999999999999998876654
No 3
>KOG1163|consensus
Probab=99.81 E-value=8.9e-22 Score=170.69 Aligned_cols=106 Identities=15% Similarity=0.300 Sum_probs=96.3
Q ss_pred cCCCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh----hHHHHHHHH
Q psy13596 7 HNGNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG----LEVRRKEAL 81 (186)
Q Consensus 7 ~~~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~----~e~~rk~a~ 81 (186)
..+..|+.||||+|||+|++||+.|. +|+.||||+||| |||.++++.|.+ .++|||||| ++.+|.
T Consensus 80 ~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaD-Qml~RiEyvH~r------~fiHRDIKPdNFLMGlgrh--- 149 (341)
T KOG1163|consen 80 GTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLAD-QMLSRIEYVHLR------NFIHRDIKPDNFLMGLGRH--- 149 (341)
T ss_pred ccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHH-HHHHHHHHHHhh------ccccccCCccceeeccccc---
Confidence 35678999999999999999999999 899999999998 999999999999 999999998 777776
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhhh----HHHHHHHHHHHHHHhhHHHH
Q psy13596 82 SAANDLTQALVDHLNVGVAQAYLNQKKLD----AEAKQLHTNAITFSKQTQQW 130 (186)
Q Consensus 82 ~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie----~E~K~L~~~Ta~laKqt~qW 130 (186)
-+-++.||||+|+.|.+.++-. ++.+. .++|+||++++.+.
T Consensus 150 -------~~kl~LIDFGLaKky~d~~t~~HIpyre~r~-ltGTaRYASinAh~ 194 (341)
T KOG1163|consen 150 -------CNKLYLIDFGLAKKYRDIRTRQHIPYREDRN-LTGTARYASINAHL 194 (341)
T ss_pred -------cceEEEEeccchhhhccccccccCccccCCc-cceeeeehhhhhhh
Confidence 6789999999999999877655 77787 89999999998765
No 4
>KOG1165|consensus
Probab=99.79 E-value=6.7e-22 Score=177.11 Aligned_cols=122 Identities=16% Similarity=0.248 Sum_probs=101.6
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh----hHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG----LEVRRKEALSA 83 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~----~e~~rk~a~~s 83 (186)
.+.|+.||||+|||||++||+.|| +||.|||+||| +|||++|+++|.+ ..|-||||| +++-
T Consensus 95 eG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA-~Qmi~rie~vH~k------~LIYRDIKPdNFLIGrp------- 160 (449)
T KOG1165|consen 95 EGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIA-KQMITRIEYVHEK------DLIYRDIKPDNFLIGRP------- 160 (449)
T ss_pred ccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHH-HHHHHHHHHHHhc------ceeecccCccceeecCC-------
Confidence 467999999999999999999999 99999999999 8999999999999 999999998 4441
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhhh----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccH
Q psy13596 84 ANDLTQALVDHLNVGVAQAYLNQKKLD----AEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDV 147 (186)
Q Consensus 84 ~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie----~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDv 147 (186)
.+=..++++.||||+++-|+++++-. +|-|. ..+||||.+++..+-+.- .=++-|--+|.|
T Consensus 161 -~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KS-LsGTARYMSINTHlGrEQ-SRRDDLEaLGHv 225 (449)
T KOG1165|consen 161 -GTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKS-LSGTARYMSINTHLGREQ-SRRDDLEALGHV 225 (449)
T ss_pred -CCCCCceEEEEeccchhhhcCccccccCccccccc-cccceeeeEeeccccchh-hhhhhHHHhhhh
Confidence 11127799999999999999999988 88888 899999999998776542 223334444443
No 5
>KOG1164|consensus
Probab=99.39 E-value=7.1e-15 Score=128.04 Aligned_cols=104 Identities=18% Similarity=0.274 Sum_probs=82.7
Q ss_pred CCeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh----hHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG----LEVRRKEALS 82 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~----~e~~rk~a~~ 82 (186)
...|+||||+++|++|++|+..++ +||.+||+.|| +|+|+.|+.+|+. +++|||||| .+....
T Consensus 92 ~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia-~q~l~~l~~lH~~------G~iHRDiKp~N~~~g~~~~---- 160 (322)
T KOG1164|consen 92 TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIA-IQNLNALEDLHSK------GFIHRDIKPENFVVGQSSR---- 160 (322)
T ss_pred CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHH-HHHHHHHHHHHhc------CcccCCcCHHHeeecCCCC----
Confidence 568999999999999999997654 89999999999 8999999999999 999999998 332210
Q ss_pred HHHHHHHHHHHHhhHhHHH--Hhhhhhh----hhHHHHHHHHHHHHHHhhH
Q psy13596 83 AANDLTQALVDHLNVGVAQ--AYLNQKK----LDAEAKQLHTNAITFSKQT 127 (186)
Q Consensus 83 s~~~l~~~Lv~~Ln~gvs~--~y~Nqk~----ie~E~K~L~~~Ta~laKqt 127 (186)
-....++.||+|++. .|.+... -.+..+....+|.+|++.+
T Consensus 161 ----~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~ 207 (322)
T KOG1164|consen 161 ----SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASIN 207 (322)
T ss_pred ----cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHH
Confidence 002468999999999 6555442 2233345678999999976
No 6
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.75 E-value=2e-05 Score=66.78 Aligned_cols=84 Identities=14% Similarity=0.128 Sum_probs=63.6
Q ss_pred cccCCCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHH
Q psy13596 5 QEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAA 84 (186)
Q Consensus 5 ~~~~~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~ 84 (186)
.......|+|++|+.++.++.+++.....++...++.|+ .|++..|.+.|+. +.+||||||.-.. +.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~iiHrDiKp~Nil----l~-- 160 (294)
T PHA02882 94 FKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIM-KDMLTTLEYIHEH------GISHGDIKPENIM----VD-- 160 (294)
T ss_pred EecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCHHHEE----Ec--
Confidence 334455699999999999999999865568999999999 7999999999998 9999999882110 00
Q ss_pred HHHHHHHHHHhhHhHHHHhh
Q psy13596 85 NDLTQALVDHLNVGVAQAYL 104 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y~ 104 (186)
....+...|||++..+.
T Consensus 161 ---~~~~~~l~DFGla~~~~ 177 (294)
T PHA02882 161 ---GNNRGYIIDYGIASHFI 177 (294)
T ss_pred ---CCCcEEEEEcCCceeec
Confidence 01123367889887653
No 7
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.53 E-value=6e-05 Score=66.13 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=52.2
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....|.|||||.+ |.+|..++..++.|+..++..++ .|++..|.+.|+. +.+||||||
T Consensus 71 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~-~ql~~aL~~LH~~------givHrDlkp 129 (377)
T cd05629 71 QDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYM-AECVLAIEAVHKL------GFIHRDIKP 129 (377)
T ss_pred EcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 3557899999998 78999998866689999999999 6999999999998 999999997
No 8
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.38 E-value=0.00012 Score=60.94 Aligned_cols=63 Identities=22% Similarity=0.233 Sum_probs=54.3
Q ss_pred cccccCCCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 3 GQQEHNGNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 3 G~~~~~~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|.+...+..+.|+|||.+ |.+|.+++.... .++..+++.+. .||+..|.+.|+. +.+|++|+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~-~~i~~aL~~lH~~------gi~H~dlkp 137 (284)
T cd05079 73 GICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA-VQICKGMDYLGSR------QYVHRDLAA 137 (284)
T ss_pred eEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHC------Ceeecccch
Confidence 334444457889999999 899999988766 79999999999 7999999999988 999999987
No 9
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.35 E-value=0.00014 Score=63.10 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|..++...+.|+...+..++ .|++..|.+.|.. +.+||||||
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~------~ivH~Dlkp 129 (364)
T cd05599 72 DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYI-AETILAIDSIHKL------GYIHRDIKP 129 (364)
T ss_pred cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeccCCH
Confidence 457899999998 78999988866689999999999 7999999999999 999999997
No 10
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.30 E-value=0.00019 Score=60.98 Aligned_cols=55 Identities=7% Similarity=0.211 Sum_probs=50.5
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-|+|||.+|.+|.+++..++.|+...+..++ .|+++.|.+.|+. +.+||||+|
T Consensus 77 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~LH~~------~ivH~dlkp 131 (338)
T cd07859 77 KDIYVVFELMESDLHQVIKANDDLTPEHHQFFL-YQLLRALKYIHTA------NVFHRDLKP 131 (338)
T ss_pred ceEEEEEecCCCCHHHHHHhcccCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 356999999999999998866689999999999 7999999999999 999999987
No 11
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.24 E-value=0.00022 Score=61.25 Aligned_cols=57 Identities=11% Similarity=0.047 Sum_probs=51.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|......+++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~------~ivH~dlkp 124 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYA-AEIICGLQFLHKK------GIIYRDLKL 124 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEEeCCCCH
Confidence 456889999998 78999888876699999999999 7999999999998 999999987
No 12
>PTZ00284 protein kinase; Provisional
Probab=97.23 E-value=0.00024 Score=64.57 Aligned_cols=57 Identities=16% Similarity=0.171 Sum_probs=51.3
Q ss_pred CeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++||+.+|.+|.+.+...+.|+...+..|+ .|++..|.+.|.+ .+++||||||
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~-~qi~~aL~yLH~~-----~gIiHrDlKP 260 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQII-FQTGVALDYFHTE-----LHLMHTDLKP 260 (467)
T ss_pred CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhc-----CCeecCCCCH
Confidence 4577999999999999988876789999999999 7999999999985 4899999997
No 13
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.23 E-value=0.00025 Score=60.81 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=52.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|..++...+.|+...+..++ .|++..|.+.|.. +.+|+||+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~-~qi~~aL~~LH~~------giiH~Dlkp 129 (350)
T cd05573 72 DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYI-AELVLALDSVHKL------GFIHRDIKP 129 (350)
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 457899999998 78999999877789999999999 7999999999998 999999987
No 14
>KOG0663|consensus
Probab=97.22 E-value=4.4e-05 Score=69.50 Aligned_cols=120 Identities=18% Similarity=0.261 Sum_probs=91.8
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHH-HHHHHHHHHHH
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVR-RKEALSAANDL 87 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~-rk~a~~s~~~l 87 (186)
.+-=|||||-+-.||..+.+.-+ +|+.+-|--|. +|+|+.+.+.|.. -++|||+|+--.. -.
T Consensus 149 ~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~-~QlL~glk~lH~~------wilHRDLK~SNLLm~~--------- 212 (419)
T KOG0663|consen 149 MDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLM-LQLLRGLKHLHDN------WILHRDLKTSNLLLSH--------- 212 (419)
T ss_pred cceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHH-HHHHHHHHHHhhc------eeEecccchhheeecc---------
Confidence 34579999999999999999878 99999999999 8999999999999 8999998862110 00
Q ss_pred HHHHHHHhhHhHHHHhhhhhh-hh-------HHHHHHHHHHHHHHhhHHHHHH------------------HHHHHHHHh
Q psy13596 88 TQALVDHLNVGVAQAYLNQKK-LD-------AEAKQLHTNAITFSKQTQQWLS------------------LVDNFNSAL 141 (186)
Q Consensus 88 ~~~Lv~~Ln~gvs~~y~Nqk~-ie-------~E~K~L~~~Ta~laKqt~qW~~------------------l~~~~~~~L 141 (186)
...+..-|||+|..|.++.+ .. =.+=+|.-++..|..-.+=|.- -.++++.-.
T Consensus 213 -~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If 291 (419)
T KOG0663|consen 213 -KGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIF 291 (419)
T ss_pred -CCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHH
Confidence 12345579999999999832 11 2245667777888888888852 456777777
Q ss_pred hhhcc
Q psy13596 142 KEIGD 146 (186)
Q Consensus 142 KEiGD 146 (186)
+.+|-
T Consensus 292 ~llGt 296 (419)
T KOG0663|consen 292 KLLGT 296 (419)
T ss_pred HHhCC
Confidence 77774
No 15
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.22 E-value=0.00024 Score=61.22 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=51.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~qi~~al~~lH~~------~ivHrDlkp 124 (327)
T cd05617 67 TTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYA-AEICIALNFLHER------GIIYRDLKL 124 (327)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 446789999999 78999888866689999999999 7999999999998 999999987
No 16
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.21 E-value=0.00028 Score=59.64 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=52.0
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.++.+|...+..+. .++...+..++ .|++..|.+.|+. +.+||||||
T Consensus 74 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivH~dlkp 131 (303)
T cd07869 74 TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFL-FQLLRGLSYIHQR------YILHRDLKP 131 (303)
T ss_pred cCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 456889999999999999888766 89999999999 7999999999999 999999997
No 17
>KOG0581|consensus
Probab=97.20 E-value=6.5e-05 Score=68.28 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=75.7
Q ss_pred cccccCCCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHH
Q psy13596 3 GQQEHNGNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEAL 81 (186)
Q Consensus 3 G~~~~~~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~ 81 (186)
|.+.+++. -=.|+||.++ -||.+++..-|+++++.+-.|| .++|+.|.+.|.. ++++||||||.-..-+
T Consensus 144 gaF~~~~~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia-~~VL~GL~YLh~~-----~~IIHRDIKPsNlLvN--- 213 (364)
T KOG0581|consen 144 GAFYSNGE-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIA-RAVLRGLSYLHEE-----RKIIHRDIKPSNLLVN--- 213 (364)
T ss_pred EEEEeCCc-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhc-----cCeeeccCCHHHeeec---
Confidence 44555554 5679999996 8999999988899999999999 7999999999986 6999999998422111
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHh
Q psy13596 82 SAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSK 125 (186)
Q Consensus 82 ~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laK 125 (186)
+..-|...|||||..-.|. + +.. ..||..|.+
T Consensus 214 ------skGeVKicDFGVS~~lvnS--~---a~t-fvGT~~YMs 245 (364)
T KOG0581|consen 214 ------SKGEVKICDFGVSGILVNS--I---ANT-FVGTSAYMS 245 (364)
T ss_pred ------cCCCEEeccccccHHhhhh--h---ccc-ccccccccC
Confidence 0223567899999988886 1 222 556665543
No 18
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.20 E-value=0.00033 Score=57.38 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=51.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|.+.+..+. .++..+++.++ .|++..+.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~i~H~dl~p 128 (256)
T cd05059 70 KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC-SDVCEAMEYLESN------GFIHRDLAA 128 (256)
T ss_pred CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHC------CcccccccH
Confidence 446899999998 889999888766 89999999999 6999999999998 899999886
No 19
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.20 E-value=0.00027 Score=61.07 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=51.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+|.|+|||.+ |.+|..++..++ .|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 72 ~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~-~qi~~~L~~lH~~------~iiHrDlkp 130 (331)
T cd05624 72 DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYI-AEMVLAIHSIHQL------HYVHRDIKP 130 (331)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeccCch
Confidence 567899999987 899999998876 89999999999 6999999999998 999999987
No 20
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.18 E-value=0.00032 Score=60.29 Aligned_cols=57 Identities=11% Similarity=0.162 Sum_probs=51.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.+++...+.|+...+..++ .||+..|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 129 (333)
T cd05600 72 DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYM-AEMFEAVDALHEL------GYIHRDLKP 129 (333)
T ss_pred cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCCH
Confidence 456899999998 88999999866689999999999 6999999999998 999999987
No 21
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.17 E-value=0.00029 Score=60.48 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=50.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|||||.+ |.+|...+..+++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivHrDlkp 124 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYA-AEIVCGLQFLHSK------GIIYRDLKL 124 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 456889999988 57898888766689999999999 7999999999998 999999987
No 22
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.17 E-value=0.00026 Score=59.24 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=49.4
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+. .+|..+...++ +++...++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~iiH~dlkp 145 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVA-QQLASALSYLEDK------NLVHGNVCA 145 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHcC------CccCCCCCc
Confidence 468999999885 67888877655 89999999999 7999999999988 999999987
No 23
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.16 E-value=0.00032 Score=60.35 Aligned_cols=57 Identities=9% Similarity=0.009 Sum_probs=51.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.......+.|+...++.++ .|++..|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~-~qi~~al~~lH~~------~ivHrDikp 129 (323)
T cd05615 72 TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA-AEISVGLFFLHRR------GIIYRDLKL 129 (323)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 346789999998 78999888766699999999999 7999999999988 999999987
No 24
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.15 E-value=0.00027 Score=61.02 Aligned_cols=57 Identities=12% Similarity=0.145 Sum_probs=51.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|..++...+ +|+..++..++ .|++..|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 130 (331)
T cd05597 72 DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL-AEMVLAIDSVHQL------GYVHRDIKP 130 (331)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEECCCCH
Confidence 456889999987 899999998766 89999999999 6999999999998 999999987
No 25
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.15 E-value=0.00031 Score=60.27 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=50.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|...+...++|+...+..++ .||++.|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivH~dlkp 129 (324)
T cd05587 72 TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYA-AEIAIGLFFLHSK------GIIYRDLKL 129 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 456789999998 78998888766689999999999 6999999999998 999999997
No 26
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.14 E-value=0.00031 Score=61.51 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=51.6
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.+|||+.++.+|...+..++ .|+...++.|+ .|++..|.+.|.. +.+||||||
T Consensus 129 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~------~ivHrDlkp 185 (357)
T PHA03209 129 GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIE-KQILEGLRYLHAQ------RIIHRDVKT 185 (357)
T ss_pred CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 46789999999999999988777 89999999999 7999999999998 999999987
No 27
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.14 E-value=0.00032 Score=61.36 Aligned_cols=57 Identities=14% Similarity=0.215 Sum_probs=51.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.+++..++.|+...+..++ .||+..|.+.|+. +.+||||+|
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDLkp 159 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYA-AQIVLIFEYLQSL------NIVYRDLKP 159 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEccCCCH
Confidence 446889999988 78999998876699999999999 7999999999999 999999987
No 28
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.13 E-value=0.00032 Score=61.44 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=51.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|||||.+ |.+|..++...+.|+...+..++ .||+..|.+.|+. +++||||||
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivHrDlkp 129 (376)
T cd05598 72 DKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYI-AELTCAIESVHKM------GFIHRDIKP 129 (376)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeCCCCH
Confidence 456889999998 89999999876689999999998 6999999999998 999999987
No 29
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.12 E-value=0.00034 Score=61.67 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=51.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|..++...+.|+...+..++ .|++..|.+.|.. +++||||||
T Consensus 72 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~-~qi~~aL~~LH~~------givHrDlKp 129 (381)
T cd05626 72 DKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYI-AELTLAIESVHKM------GFIHRDIKP 129 (381)
T ss_pred cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecCCcH
Confidence 457899999998 78999998866689999999999 6999999999998 999999997
No 30
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.12 E-value=0.00036 Score=59.52 Aligned_cols=57 Identities=12% Similarity=0.178 Sum_probs=51.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+..+++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 64 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~HrDlkp 121 (312)
T cd05585 64 SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYT-AELLCALENLHKF------NVIYRDLKP 121 (312)
T ss_pred cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEeCCCCH
Confidence 456889999988 68999888876699999999999 6999999999998 999999987
No 31
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.12 E-value=0.00014 Score=59.47 Aligned_cols=86 Identities=9% Similarity=0.126 Sum_probs=60.9
Q ss_pred eEEeecccccc-HHHHHHHcCCCCcchhhcccchhHHHHHHHHH-HhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFGSD-LQKLLDEHKEFSLKNTLTITDFPILKVMSMEY-CYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 13 rfmVmerlG~d-L~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H-~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
.+||||.++.+ +.......+.|+..+++.++ .|++..|.+.| .. +.+||||+|--.. + .+.
T Consensus 92 ~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~-~qi~~~L~~l~H~~------giiHrDlkP~NIl----i------~~~ 154 (190)
T cd05147 92 HVLVMEFIGDDGWAAPRLKDAPLSESKARELY-LQVIQIMRILYQDC------RLVHADLSEYNLL----Y------HDG 154 (190)
T ss_pred CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHH-HHHHHHHHHHHHhC------CcccCCCCHHHEE----E------ECC
Confidence 48999999853 33322223489999999999 79999999995 55 9999999982110 0 011
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQ 115 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~ 115 (186)
-+..+|||.+....|+...+--.++
T Consensus 155 ~v~LiDFG~a~~~~~~~~~~~~~~d 179 (190)
T cd05147 155 KLYIIDVSQSVEHDHPHALEFLRMD 179 (190)
T ss_pred cEEEEEccccccCCCcCHHHHHHHH
Confidence 3678999999877777666643444
No 32
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.12 E-value=0.00033 Score=60.23 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=51.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|+|||.+ |.+|...+..+++|+..++..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~LH~~------~ivHrdikp 124 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYA-AEIICGLQFLHSK------GIVYRDLKL 124 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEeCCCCH
Confidence 456789999988 78999999877789999999999 7999999999998 999999987
No 33
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.11 E-value=0.00034 Score=57.88 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=50.7
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.+||||.++ .+|.++...++ .++...++.++ .+++..|.+.|+. +.+|+||+|
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~~i~~al~~lH~~------~iiH~dikp 135 (266)
T cd05064 77 RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGML-PGLASGMKYLSEM------GYVHKGLAA 135 (266)
T ss_pred cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeeccccH
Confidence 3467899999995 58998888766 89999999999 7999999999988 899999987
No 34
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.11 E-value=0.00037 Score=59.84 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=50.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|||||.+ |.+|...+...++|+...+..++ .|+++.|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-~qil~al~~LH~~------~ivHrDlkp 124 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYI-AELVLALEHLHKY------DIVYRDLKP 124 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeccCCH
Confidence 456789999987 67888887766689999999999 7999999999998 999999987
No 35
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.10 E-value=0.00036 Score=60.81 Aligned_cols=57 Identities=14% Similarity=0.113 Sum_probs=51.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.+++...+.|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 72 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~-~qi~~~L~~lH~~------givHrDLkp 129 (360)
T cd05627 72 DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYI-AETVLAIDAIHQL------GFIHRDIKP 129 (360)
T ss_pred cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEccCCCH
Confidence 456889999998 78999998866689999999999 7999999999998 999999997
No 36
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.10 E-value=0.00043 Score=57.73 Aligned_cols=56 Identities=13% Similarity=0.161 Sum_probs=51.3
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.++.+|..++...+ .|+..+++.++ .|+++.|.+.|+. +.+|++|+|
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~------~i~H~dl~p 147 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVM-KMLLNGLYYIHRN------KILHRDMKA 147 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 35679999999999999998777 89999999999 7999999999998 899999886
No 37
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.09 E-value=0.00037 Score=60.98 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=51.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|..+...++.|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 72 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~------givHrDlKp 129 (363)
T cd05628 72 DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYI-AETVLAIDSIHQL------GFIHRDIKP 129 (363)
T ss_pred cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEecCCCH
Confidence 456789999998 78999998876789999999999 7999999999998 999999997
No 38
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.06 E-value=0.00046 Score=59.11 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=51.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|..++..+. .|+...+..+. .|++..|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~------~i~H~Dlkp 130 (330)
T cd05601 72 DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYL-AELVLAIHSVHQM------GYVHRDIKP 130 (330)
T ss_pred cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEcccCch
Confidence 346789999998 899999999885 89999999999 7999999999999 999999987
No 39
>KOG0661|consensus
Probab=97.06 E-value=0.00025 Score=66.84 Aligned_cols=79 Identities=11% Similarity=0.164 Sum_probs=64.1
Q ss_pred eeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
.=|+|||.+-++|-.|++..+ -||++++..|. .|||+.|..+|.+ ++-|||+||--..=. +..
T Consensus 84 ~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim-~QilqGL~hiHk~------GfFHRDlKPENiLi~---------~~~ 147 (538)
T KOG0661|consen 84 ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIM-YQILQGLAHIHKH------GFFHRDLKPENILIS---------GND 147 (538)
T ss_pred eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHH-HHHHHHHHHHHhc------CcccccCChhheEec---------ccc
Confidence 568999999999999999888 79999999999 7999999999999 999999998321100 044
Q ss_pred HHHHhhHhHHHHhhhh
Q psy13596 91 LVDHLNVGVAQAYLNQ 106 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nq 106 (186)
++..-|||++.--.+.
T Consensus 148 ~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 148 VIKIADFGLAREVRSK 163 (538)
T ss_pred eeEecccccccccccC
Confidence 6677789988654433
No 40
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.06 E-value=0.00041 Score=59.59 Aligned_cols=57 Identities=12% Similarity=0.051 Sum_probs=50.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|+|||.+ |.+|...+..++.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 66 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~ivHrDlkp 123 (323)
T cd05571 66 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG-AEIVSALGYLHSC------DVVYRDLKL 123 (323)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEeCCCCH
Confidence 456889999988 57898888766689999999999 7999999999999 999999997
No 41
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.05 E-value=0.00041 Score=59.83 Aligned_cols=57 Identities=12% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+++..++ .|+..++..++ .||+..|.+.|+. +.+||||||
T Consensus 72 ~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~-~qi~~al~~lH~~------~iiHrDlkp 130 (332)
T cd05623 72 DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL-AEMVIAIDSVHQL------HYVHRDIKP 130 (332)
T ss_pred cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 456789999986 789999998776 89999999999 6999999999998 999999987
No 42
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.04 E-value=0.00041 Score=57.93 Aligned_cols=56 Identities=9% Similarity=0.096 Sum_probs=52.0
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+|.+|..++...+ .|+...++.++ .|+++.|.+.|.. +.+|++|+|
T Consensus 74 ~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~i~H~dl~p 130 (298)
T cd07841 74 KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYM-LMTLRGLEYLHSN------WILHRDLKP 130 (298)
T ss_pred CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecCCCh
Confidence 56899999999999999998777 89999999999 6999999999999 899999886
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.04 E-value=0.0005 Score=57.98 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=50.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+..++.|+...+..++ .||++.|.+.|+. +.+|+||+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dlkp 129 (291)
T cd05612 72 DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYA-SEIVCALEYLHSK------EIVYRDLKP 129 (291)
T ss_pred cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCH
Confidence 456899999976 67899988866689999999999 7999999999998 999999987
No 44
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.04 E-value=0.0005 Score=55.87 Aligned_cols=57 Identities=11% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++...+ .++..+++.+. .||++.|.+.|+. +.+|++|+|
T Consensus 64 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~i~H~dl~p 122 (252)
T cd05084 64 QKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMV-ENAAAGMEYLESK------HCIHRDLAA 122 (252)
T ss_pred CCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------Cccccccch
Confidence 346789999987 689999887766 79999999999 7999999999988 899999987
No 45
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.04 E-value=0.00056 Score=57.45 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=51.3
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.++.+|...+..++ .++...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 75 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivH~dlkp 131 (288)
T cd07871 75 ERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFM-FQLLRGLSYCHKR------KILHRDLKP 131 (288)
T ss_pred CCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 35678999999999999998888 79999999999 6999999999998 999999987
No 46
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.02 E-value=0.0005 Score=56.63 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=51.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+...+ .|+..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~------~i~h~dlkp 134 (267)
T cd05066 76 KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGML-RGIASGMKYLSDM------GYVHRDLAA 134 (267)
T ss_pred cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeehhhch
Confidence 446889999999 789999998776 89999999999 6999999999998 999999987
No 47
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.02 E-value=0.00039 Score=57.10 Aligned_cols=56 Identities=7% Similarity=0.027 Sum_probs=50.2
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.+||||.+ |.+|..++..++ .++...++.++ .|++..|.+.|+. +.+||||+|
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~iiH~dlkp 128 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVA-KQLAWALHFLEDK------GLTHGNVCA 128 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCcc
Confidence 35688999988 568999988777 79999999999 7999999999998 999999997
No 48
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.02 E-value=0.00052 Score=56.54 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+|.+|.+++...+ .|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 127 (286)
T cd07832 70 HGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYM-RMLLKGVAYMHAN------GIMHRDLKP 127 (286)
T ss_pred cCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCcCH
Confidence 356889999999999999998766 79999999999 6999999999998 899999876
No 49
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.01 E-value=0.00049 Score=59.08 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=50.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|..++...+.|+...+..++ .||+..|.+.|+. +.+||||||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------giiHrDlkp 124 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA-AEIASALGYLHSL------NIVYRDLKP 124 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 456789999999 56898888765589999999999 7999999999998 999999987
No 50
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.00 E-value=0.00055 Score=56.22 Aligned_cols=63 Identities=21% Similarity=0.257 Sum_probs=55.2
Q ss_pred cccccCCCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 3 GQQEHNGNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 3 G~~~~~~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|.....+..+.++|||.+ |.+|.+++..+. +++..+++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~l~~aL~~lH~~------~i~H~dl~p 137 (284)
T cd05038 73 GVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFS-SQICKGMDYLGSQ------RYIHRDLAA 137 (284)
T ss_pred eeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 344455677899999988 789999998777 89999999999 6999999999988 999999986
No 51
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.99 E-value=0.00054 Score=57.90 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=51.5
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.|+|||.++.+|..++..+. .|+...+..++ .||+..|.+.|+. +.+|++|+|
T Consensus 80 ~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dl~p 136 (309)
T cd07845 80 LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLM-LQLLRGLQYLHEN------FIIHRDLKV 136 (309)
T ss_pred CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 35679999999999999999876 89999999999 7999999999999 899999987
No 52
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.99 E-value=0.00047 Score=56.84 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=50.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|.+++..+. .++..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 66 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlkp 123 (257)
T cd05115 66 AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELM-HQVSMGMKYLEGK------NFVHRDLAA 123 (257)
T ss_pred CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhc------Ceeecccch
Confidence 45789999988 689999888666 89999999999 7999999999988 999999987
No 53
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=96.99 E-value=0.00045 Score=59.31 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=50.2
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....+.|||||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. ++.+||||+|
T Consensus 65 ~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~-----~~ivHrDikp 124 (325)
T cd05594 65 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG-AEIVSALDYLHSE-----KNVVYRDLKL 124 (325)
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhc-----CCEEecCCCC
Confidence 3456889999998 57887777655589999999999 7999999999985 4999999997
No 54
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.96 E-value=0.00057 Score=60.72 Aligned_cols=57 Identities=16% Similarity=0.214 Sum_probs=51.2
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-+|||+.++.+|...+..++.|+...++.++ .|++..|.+.|.. +.+||||||
T Consensus 157 ~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~-~ql~~aL~~LH~~------givHrDlkp 213 (392)
T PHA03207 157 WKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQ-RRLLEALAYLHGR------GIIHRDVKT 213 (392)
T ss_pred eCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCCH
Confidence 34678999999999999988655589999999999 7999999999998 999999987
No 55
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.96 E-value=0.00058 Score=58.91 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=50.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|...+...++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 124 (329)
T cd05588 67 TESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYS-AEISLALNFLHER------GIIYRDLKL 124 (329)
T ss_pred cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 346789999988 67998887766699999999999 7999999999998 999999987
No 56
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.96 E-value=0.00066 Score=56.86 Aligned_cols=57 Identities=11% Similarity=0.117 Sum_probs=52.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+++...+.|+..++..++ .|++..|.+.|.. +.+|++|+|
T Consensus 72 ~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~qil~~l~~lH~~------~i~H~dl~p 129 (290)
T cd05580 72 DDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYA-AQVVLALEYLHSL------DIVYRDLKP 129 (290)
T ss_pred cCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEecCCCCH
Confidence 456789999999 99999999877799999999999 7999999999998 999999986
No 57
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=96.95 E-value=0.0006 Score=59.90 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=50.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|.+++..++.|+...+..++ .|++..|.+.|+. +++||||||
T Consensus 72 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~-~qi~~al~~lH~~------~ivHrDlKp 129 (382)
T cd05625 72 DKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYI-AELTCAVESVHKM------GFIHRDIKP 129 (382)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 456889999998 67999998876689999999999 6999999999998 999999997
No 58
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.95 E-value=0.0007 Score=56.31 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=51.0
Q ss_pred CCeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-+||||.++.+|...+.... .++..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 80 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~lH~~------~iiH~dlkp 138 (290)
T cd07862 80 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM-FQLLRGLDFLHSH------RVVHRDLKP 138 (290)
T ss_pred CCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeCCCCH
Confidence 345688999999999999998654 59999999999 7999999999998 999999987
No 59
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=96.94 E-value=0.00055 Score=56.74 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=51.8
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..+.++|||.+ |.+|.+++..++ .++..+++.++ .|+++.|.+.|.. +.+|++|+|
T Consensus 77 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~~l~~aL~~LH~~------~i~H~dlkp 136 (284)
T cd05081 77 AGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYA-SQICKGMEYLGSK------RYVHRDLAT 136 (284)
T ss_pred CCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHH-HHHHHHHHHHHHC------CceeccCCH
Confidence 4456789999988 799999998776 89999999999 7999999999988 999999987
No 60
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.94 E-value=0.00067 Score=60.83 Aligned_cols=56 Identities=16% Similarity=0.320 Sum_probs=50.8
Q ss_pred CeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++||+.++.+|...+...+.++...++.++ .|++..|.+.|+. +.+||||||
T Consensus 155 ~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~-~qi~~aL~ylH~~------~IvHrDiKP 210 (391)
T PHA03212 155 NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIE-RSVLRAIQYLHEN------RIIHRDIKA 210 (391)
T ss_pred CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCh
Confidence 4678999999999998888765589999999999 7999999999998 999999997
No 61
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.92 E-value=0.00052 Score=66.08 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=51.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.++....+.|+...++.++ .|++..|.+.|.. +++||||||
T Consensus 75 ~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~-~qil~aL~yLH~~------gIiHrDLKP 132 (669)
T cd05610 75 SANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYI-SEVALALDYLHRH------GIIHRDLKP 132 (669)
T ss_pred ECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CEEeCCccH
Confidence 456899999988 89999998866689999999999 7999999999998 999999997
No 62
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.92 E-value=0.0007 Score=58.14 Aligned_cols=57 Identities=7% Similarity=0.081 Sum_probs=51.5
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.|++|+.+|.+|.+.+..+..|+..++..++ .|+++.|.+.|+. +.+|+||+|
T Consensus 77 ~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------givH~dlkp 133 (332)
T cd07857 77 NFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFI-YQILCGLKYIHSA------NVLHRDLKP 133 (332)
T ss_pred cCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 34578999999999999999765589999999999 7999999999998 999999987
No 63
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.91 E-value=0.00069 Score=58.10 Aligned_cols=57 Identities=9% Similarity=0.023 Sum_probs=50.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|+|||.+ |.+|...+...+.|+..+++.++ .|++..|.+.|+. +.+||||+|
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDlkp 129 (323)
T cd05616 72 TMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYA-AEIAIGLFFLHSK------GIIYRDLKL 129 (323)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEEecCCCH
Confidence 346789999988 67998887766689999999999 7999999999998 999999987
No 64
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.90 E-value=0.00078 Score=55.21 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=50.7
Q ss_pred CeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.++ .+|.+++...+.|+..+++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlkp 134 (267)
T cd06645 78 RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVS-RETLQGLYYLHSK------GKMHRDIKG 134 (267)
T ss_pred CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 467899999995 7999998876799999999999 7999999999999 999999886
No 65
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.90 E-value=0.00075 Score=55.49 Aligned_cols=62 Identities=11% Similarity=0.069 Sum_probs=52.7
Q ss_pred ccccCCCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 4 QQEHNGNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 4 ~~~~~~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..+...+.++|||.++.+|...+.... .|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~------~i~H~dl~p 128 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYM-YQLLKSLDHMHRN------GIFHRDIKP 128 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHC------CceecccCH
Confidence 33433346889999999989888887665 79999999999 7999999999998 999999886
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.89 E-value=0.00075 Score=58.10 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=50.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 66 ~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivH~Dlkp 123 (323)
T cd05595 66 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYG-AEIVSALEYLHSR------DVVYRDIKL 123 (323)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 346789999988 57888877765689999999999 7999999999998 999999987
No 67
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=96.88 E-value=0.00074 Score=58.03 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=50.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|...+..+++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~-~ql~~~L~~lH~~------~ivH~dlkp 124 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA-AEITSALMFLHDK------GIIYRDLKL 124 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeCCCCH
Confidence 456789999988 57998887766699999999999 7999999999998 999999987
No 68
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=96.86 E-value=0.0008 Score=56.03 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=51.0
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++-++|||.+ |.+|..++..++.|+...++.++ .|+++.|.+.|+. +.+|++|+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dl~p 137 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKII-RQLVEALNDLHKH------NIIHNDIKL 137 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeeCCCCH
Confidence 45889999998 79999999876689999999999 6999999999999 899999987
No 69
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=96.85 E-value=0.00083 Score=56.89 Aligned_cols=56 Identities=13% Similarity=0.204 Sum_probs=51.3
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.++.+|...+..++ .++...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~------~ivH~dlkp 132 (309)
T cd07872 76 DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFL-YQILRGLAYCHRR------KVLHRDLKP 132 (309)
T ss_pred CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 45789999999999999988877 79999999999 7999999999998 999999987
No 70
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=96.84 E-value=0.00096 Score=55.51 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=51.8
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.++.+|..++..++ .|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 74 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~-~ql~~al~~lH~~------~i~H~dl~p 131 (291)
T cd07844 74 TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFL-FQLLRGLAYCHQR------RVLHRDLKP 131 (291)
T ss_pred cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecccCCH
Confidence 446889999999999999988777 79999999999 6999999999988 999999987
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=96.84 E-value=0.00093 Score=57.23 Aligned_cols=56 Identities=9% Similarity=0.075 Sum_probs=49.7
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|||||.+ |.+|...+...++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 68 ~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDikp 124 (321)
T cd05591 68 KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYA-AEVTLALMFLHRH------GVIYRDLKL 124 (321)
T ss_pred CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 45679999998 57998888766689999999999 7999999999999 999999987
No 72
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.83 E-value=0.00096 Score=55.96 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|...+... + .|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 130 (285)
T cd05605 71 TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYA-AEITCGLEDLHRE------RIVYRDLKP 130 (285)
T ss_pred CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcEecCCCH
Confidence 446899999998 68898776554 3 79999999999 7999999999998 999999987
No 73
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=96.81 E-value=0.00086 Score=57.49 Aligned_cols=57 Identities=9% Similarity=0.093 Sum_probs=50.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+..++.|+...+..++ .|+++.|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------givH~dikp 124 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYA-AEIASALGYLHSL------NIIYRDLKP 124 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeCCCCH
Confidence 446789999998 57898888766689999999999 7999999999998 999999987
No 74
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.81 E-value=0.00077 Score=57.95 Aligned_cols=57 Identities=7% Similarity=0.178 Sum_probs=51.2
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++.+|..++...+.|+..++..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~------~ivH~dlkp 135 (334)
T cd07855 79 DFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFL-YQLLRGLKYIHSA------NVIHRDLKP 135 (334)
T ss_pred CCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 34688999999999999998755589999999999 7999999999998 899999986
No 75
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.81 E-value=0.0009 Score=57.85 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|...+...++++...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~-~qi~~~l~~lH~~------~ivH~Dikp 124 (329)
T cd05618 67 TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS-AEISLALNYLHER------GIIYRDLKL 124 (329)
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeCCCCH
Confidence 346889999987 57888777765689999999999 7999999999998 999999997
No 76
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.80 E-value=0.00092 Score=57.78 Aligned_cols=57 Identities=14% Similarity=0.052 Sum_probs=49.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|+|||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 66 ~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDikp 123 (328)
T cd05593 66 TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYG-AEIVSALDYLHSG------KIVYRDLKL 123 (328)
T ss_pred cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEecccCH
Confidence 456789999998 56887777655589999999999 7999999999998 999999997
No 77
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=96.80 E-value=0.00081 Score=57.90 Aligned_cols=54 Identities=9% Similarity=0.225 Sum_probs=48.7
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..-++||+.+|.+|..++. +++|+...+..++ .||+..|.+.|+. +.+||||+|
T Consensus 93 ~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~-~qi~~aL~~LH~~------~ivHrdikp 146 (343)
T cd07878 93 NEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLI-YQLLRGLKYIHSA------GIIHRDLKP 146 (343)
T ss_pred CcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecccCCh
Confidence 3468999999999999876 4589999999999 7999999999998 999999987
No 78
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.79 E-value=0.00092 Score=55.80 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=51.9
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.++.+|.+++..+. .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 78 ~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~------~i~H~dl~p 134 (293)
T cd07843 78 LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLM-LQLLSGVAHLHDN------WILHRDLKT 134 (293)
T ss_pred CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeccCCH
Confidence 37899999999999999998877 79999999999 7999999999988 899999987
No 79
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=96.79 E-value=0.0011 Score=53.65 Aligned_cols=57 Identities=14% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+...+ .++..+++.++ .+++..+.+.|.. +.+|++|+|
T Consensus 63 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~lH~~------~i~h~di~p 121 (251)
T cd05041 63 QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMS-LDAAAGMEYLESK------NCIHRDLAA 121 (251)
T ss_pred cCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEehhhcCc
Confidence 446789999998 799999987766 89999999999 7999999999988 899999987
No 80
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.78 E-value=0.00099 Score=56.36 Aligned_cols=58 Identities=9% Similarity=0.116 Sum_probs=49.7
Q ss_pred CCCeeeEEeeccccccHHHHHHHc--------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFGSDLQKLLDEH--------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG~dL~~l~~~~--------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....+-|+|||.++.+|..++... . .|+..++..++ .|++..|.+.|+. +.+||||||
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~LH~~------~ivHrDlkp 136 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLL-YQILDGIHYLHAN------WVLHRDLKP 136 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHH-HHHHHHHHHHHhC------CEEcCCCCH
Confidence 345678999999999999988643 1 48888899999 7999999999998 999999987
No 81
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=96.78 E-value=0.00092 Score=53.67 Aligned_cols=56 Identities=23% Similarity=0.320 Sum_probs=51.6
Q ss_pred CeeeEEeeccc-cccHHHHHHHc--------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH--------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~--------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|.+.+... + .|+...+..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~al~~lH~~------~i~H~di~p 133 (262)
T cd00192 68 EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFA-IQIAKGMEYLASK------KFVHRDLAA 133 (262)
T ss_pred CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHH-HHHHHHHHHHHcC------CcccCccCc
Confidence 56789999999 99999999886 5 89999999999 6999999999999 999999987
No 82
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.78 E-value=0.0011 Score=57.23 Aligned_cols=57 Identities=7% Similarity=0.056 Sum_probs=50.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|.+.+...++|+...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 89 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivH~dlkp 146 (329)
T PTZ00263 89 DENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYH-AELVLAFEYLHSK------DIIYRDLKP 146 (329)
T ss_pred cCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCH
Confidence 456889999975 78999988876699999999999 7999999999999 999999987
No 83
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.77 E-value=0.0012 Score=56.68 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=49.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivHrDlkp 133 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYS-GEIILALEHLHKL------GIVYRDIKL 133 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcEecCCCH
Confidence 446789999998 56888887755589999999999 7999999999998 999999997
No 84
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.77 E-value=0.0011 Score=56.85 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=50.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|...+..+++|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~qi~~~l~~LH~~------~ivH~dlkp 124 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYA-AEIVLGLQFLHER------GIIYRDLKL 124 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEccCCCH
Confidence 345789999998 78998888766699999999999 7999999999988 999999987
No 85
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=96.76 E-value=0.0011 Score=56.72 Aligned_cols=57 Identities=7% Similarity=0.051 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~ivH~Dlkp 124 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYA-AEVASAIGYLHSL------NIIYRDLKP 124 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeEeccCCH
Confidence 456789999998 57888777755589999999999 7999999999988 999999987
No 86
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=96.76 E-value=0.0011 Score=56.59 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=50.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|||||.+ |.+|.+.+.....|+...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 69 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dlkp 126 (318)
T cd05582 69 TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALALDHLHSL------GIIYRDLKP 126 (318)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEecCCCCH
Confidence 346789999988 68998887655589999999999 6999999999998 999999987
No 87
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.75 E-value=0.0011 Score=55.86 Aligned_cols=56 Identities=13% Similarity=0.208 Sum_probs=51.6
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.++.+|...+..++ .++...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~------~i~H~dlkp 132 (301)
T cd07873 76 EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFL-FQLLRGLNYCHRR------KVLHRDLKP 132 (301)
T ss_pred CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeCCCCCH
Confidence 46789999999999999998777 89999999999 7999999999998 999999987
No 88
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.75 E-value=0.0012 Score=54.79 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=50.8
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+..++.+.+...+ .++...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~i~H~dlkp 128 (287)
T cd07848 71 RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYI-YQLIKAIHWCHKN------DIVHRDIKP 128 (287)
T ss_pred cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 456789999999888888777666 89999999999 7999999999998 999999987
No 89
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.75 E-value=0.0013 Score=53.68 Aligned_cols=57 Identities=9% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+.++.|+||+.+ |.+|.+++...+.|+..+++.++ .|+++.|.+.|.. +..|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~-~ql~~~l~~Lh~~------~~~H~dl~~ 130 (280)
T cd05581 73 DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYA-AEILLALEYLHSK------GIIHRDLKP 130 (280)
T ss_pred CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCH
Confidence 456889999999 99999999876699999999999 7999999999988 999999876
No 90
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.73 E-value=0.0011 Score=53.73 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=49.4
Q ss_pred eeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+||||.+ |.+|..++...+ .|+...++.++ .|++..|.+.|.. +.+|+||+|
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~dlkp 129 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVA-KQLASALHYLEDK------KLVHGNVCG 129 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHH-HHHHHHHHHHhhC------CeecccCcc
Confidence 4679999998 478999888777 89999999999 6999999999988 999999997
No 91
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.72 E-value=0.0012 Score=54.31 Aligned_cols=56 Identities=16% Similarity=0.156 Sum_probs=49.9
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.|+|||.+ |.+|.+++..+. .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 128 (256)
T cd05113 71 QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMC-KDVCEGMAYLESK------QFIHRDLAA 128 (256)
T ss_pred CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccccCc
Confidence 45679999987 578999888776 89999999999 7999999999998 999999986
No 92
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=96.72 E-value=0.0012 Score=56.57 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~lH~~------givH~Dlkp 124 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYA-AEIASALGYLHSI------NIVYRDLKP 124 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCH
Confidence 456789999988 57888777655589999999999 7999999999998 999999987
No 93
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.72 E-value=0.0012 Score=54.51 Aligned_cols=57 Identities=12% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.++.+|.+.+..++ +++...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~------~i~H~dl~~ 127 (284)
T cd07839 70 SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFM-FQLLKGLAFCHSH------NVLHRDLKP 127 (284)
T ss_pred cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEecCCCCH
Confidence 346789999999999999988766 89999999999 7999999999998 999999886
No 94
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.71 E-value=0.0015 Score=52.63 Aligned_cols=57 Identities=12% Similarity=0.182 Sum_probs=51.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|..++...+.++..++..++ .|++..|.+.|.. +.+|++|+|
T Consensus 64 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~~L~~lH~~------~i~H~di~~ 121 (265)
T cd05579 64 GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYI-AEIVLALEYLHSN------GIIHRDLKP 121 (265)
T ss_pred cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHc------CeecCCCCH
Confidence 457889999999 68999999876689999999999 6999999999988 999999876
No 95
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.70 E-value=0.001 Score=55.18 Aligned_cols=57 Identities=5% Similarity=0.019 Sum_probs=48.2
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...++|||||.++ .+|..++...+ .|+...++.++ .|+++.|.+.|+. +.+||||+|
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~ivH~dlkp 133 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA-KQLASALSYLEDK------DLVHGNVCT 133 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHhhhC------CeECCCCCc
Confidence 4467899999986 45666655555 79999999999 7999999999988 999999987
No 96
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.70 E-value=0.0012 Score=58.31 Aligned_cols=56 Identities=13% Similarity=0.208 Sum_probs=49.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++. +++|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~-~~~l~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDLkp 170 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMS-NYDIPEKWARFYT-AEVVLALDAIHSM------GFIHRDVKP 170 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH-hcCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 457899999998 789999875 2379999999999 7999999999998 999999997
No 97
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.69 E-value=0.0014 Score=54.25 Aligned_cols=56 Identities=11% Similarity=0.117 Sum_probs=50.4
Q ss_pred CeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.++.+|..++.... .|+...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivH~dikp 136 (288)
T cd07863 79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLM-RQFLRGLDFLHAN------CIVHRDLKP 136 (288)
T ss_pred CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 45678999999999999888754 69999999999 7999999999999 999999987
No 98
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.69 E-value=0.0014 Score=53.49 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=49.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.+.+...+.++...+..++ .|+++.|.+.|+. +.+|+||+|
T Consensus 56 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~ql~~~l~~lH~~------~i~H~dlkp 113 (237)
T cd05576 56 SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWA-AEMVVALDALHRE------GIVCRDLNP 113 (237)
T ss_pred cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 357889999988 47898888755589999999999 6999999999988 999999987
No 99
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.68 E-value=0.0016 Score=54.96 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=51.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|..++..++.++...+..++ .++++.|.+.|+. +.+|++++|
T Consensus 72 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 129 (305)
T cd05609 72 TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYF-AETVLALEYLHNY------GIVHRDLKP 129 (305)
T ss_pred cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCch
Confidence 456889999988 68999999876689999999999 6999999999988 999999887
No 100
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.68 E-value=0.0011 Score=58.70 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...|.|+|||.+ |.+|..++.. .+|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDLkp 170 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYT-AEVVLALDAIHSM------GFIHRDVKP 170 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHH-HHHHHHHHHHHHC------CEEeCCCCH
Confidence 457899999998 7899998863 379999999999 7999999999998 999999997
No 101
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.68 E-value=0.0016 Score=59.36 Aligned_cols=80 Identities=8% Similarity=0.126 Sum_probs=59.2
Q ss_pred CeeeEEeeccccccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHH
Q psy13596 10 NSYRFIIISKFGSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAAN 85 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~ 85 (186)
..|-++|||.++.+|.+++.. .+ .|+..++..++ .||+..|.+.|+. +.+||||||.-.. +..
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~-~qi~~gL~yLH~~------~IiHrDLKp~NIL----l~~-- 205 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYS-YQLCRALAYIHSK------FICHRDLKPQNLL----IDP-- 205 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEecCCcCHHHEE----EcC--
Confidence 346779999999998877653 34 79999999999 7999999999998 9999999972110 000
Q ss_pred HHHHHHHHHhhHhHHHHhh
Q psy13596 86 DLTQALVDHLNVGVAQAYL 104 (186)
Q Consensus 86 ~l~~~Lv~~Ln~gvs~~y~ 104 (186)
....+...|+|++..+.
T Consensus 206 --~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 206 --NTHTLKLCDFGSAKNLL 222 (440)
T ss_pred --CCCceeeeccccchhcc
Confidence 01235567888887553
No 102
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=96.67 E-value=0.0014 Score=53.88 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=50.6
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++ .+|..++..++ .|+..+++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~-~~l~~al~~lH~~------g~~H~dl~p 134 (269)
T cd05065 76 KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGML-RGIAAGMKYLSEM------NYVHRDLAA 134 (269)
T ss_pred CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeecccCh
Confidence 4457899999985 68999988766 89999999999 6999999999988 999999987
No 103
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=96.66 E-value=0.0013 Score=54.93 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+...+ .++...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 64 ~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivH~dikp 123 (277)
T cd05607 64 SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYS-AQITCGILHLHSM------DIVYRDMKP 123 (277)
T ss_pred cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHHC------CEEEccCCh
Confidence 456889999998 789988776544 69999999999 6999999999998 999999987
No 104
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=96.66 E-value=0.0013 Score=54.57 Aligned_cols=57 Identities=21% Similarity=0.276 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.++....+ .|+.+.++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~------~ivH~dlkp 144 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCA-RDVAKGCKYLEEN------HFIHRDIAA 144 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeecccch
Confidence 345678999988 899999987653 48889999999 7999999999998 899999987
No 105
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.65 E-value=0.0013 Score=58.38 Aligned_cols=57 Identities=12% Similarity=0.209 Sum_probs=50.2
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....+.|+|||.+ |.+|..++.. .+++...+..++ .|++..|.+.|+. +.+||||||
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~-~qil~aL~~LH~~------~IvHrDLKp 170 (370)
T cd05621 113 QDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYT-AEVVLALDAIHSM------GLIHRDVKP 170 (370)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHH-HHHHHHHHHHHHC------CeEecCCCH
Confidence 3567899999998 7899998862 379999999999 7999999999998 999999997
No 106
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.65 E-value=0.0012 Score=56.96 Aligned_cols=55 Identities=9% Similarity=0.182 Sum_probs=50.4
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.||||+.++.+|.+.+..++.|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~------~i~H~dlkp 136 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFL-YQLLRGLKYIHSA------NVLHRDLKP 136 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEecCCCCH
Confidence 468999999999999998866699999999999 6999999999988 899999886
No 107
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=96.64 E-value=0.0018 Score=54.13 Aligned_cols=57 Identities=11% Similarity=0.083 Sum_probs=47.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|...... .+ .|+...++.++ .|+++.|.+.|+. +.+|+||+|
T Consensus 64 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dlkp 125 (280)
T cd05608 64 TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYT-AQIISGLEHLHQR------RIIYRDLKP 125 (280)
T ss_pred CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 446789999988 6889765532 33 69999999999 7999999999998 999999987
No 108
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.63 E-value=0.0011 Score=53.70 Aligned_cols=56 Identities=23% Similarity=0.348 Sum_probs=51.5
Q ss_pred CeeeEEeeccccc-cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGS-DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~-dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++||+.+.. +|..++...+.|+...++.++ .||+..|.+.|+. +.+|+||+|
T Consensus 70 ~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~Lh~~------~i~H~dikp 126 (260)
T PF00069_consen 70 DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIA-YQILEALAYLHSK------GIVHRDIKP 126 (260)
T ss_dssp SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHH-HHHHHHHHHHHHT------TEEESSBSG
T ss_pred ccccccccccccccccccccccccccccccccccc-ccccccccccccc------ccccccccc
Confidence 4677899999998 999999866699999999999 7999999999999 999999987
No 109
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=96.63 E-value=0.0014 Score=53.66 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=49.3
Q ss_pred CeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++|||.++ .+|.+++...+.|+..+++.++ .||+..|.+.|.. +.+|++|+|
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~al~~lH~~------~i~H~dlkp 123 (257)
T cd05116 67 AESWMLVMELAELGPLNKFLQKNKHVTEKNITELV-HQVSMGMKYLEET------NFVHRDLAA 123 (257)
T ss_pred CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeecccch
Confidence 456799999876 6799988755589999999999 7999999999988 899999987
No 110
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=96.61 E-value=0.0015 Score=54.75 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=48.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-++|||.+ |.+|....... + .|+...++.++ .|++..|.+.|+. +.+||||+|
T Consensus 71 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~iiH~dikp 130 (285)
T cd05631 71 TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYA-AELCCGLEDLQRE------RIVYRDLKP 130 (285)
T ss_pred cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEEeCCCCH
Confidence 446789999988 57898766543 4 79999999999 7999999999998 999999987
No 111
>PHA03211 serine/threonine kinase US3; Provisional
Probab=96.61 E-value=0.0013 Score=60.86 Aligned_cols=56 Identities=14% Similarity=0.197 Sum_probs=51.1
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.||||+.++.+|...+.... .|+...++.|+ .|++..|.+.|+. +++||||||
T Consensus 232 ~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~-~qi~~aL~yLH~~------gIvHrDLKP 288 (461)
T PHA03211 232 GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVA-RQLLSAIDYIHGE------GIIHRDIKT 288 (461)
T ss_pred CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CEEECcCCH
Confidence 45789999999999999888766 79999999999 7999999999998 999999997
No 112
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.59 E-value=0.0015 Score=56.53 Aligned_cols=57 Identities=9% Similarity=0.114 Sum_probs=50.9
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+ |.+|.+++..++.++...+..++ .+++..|.+.|+. .+.+|++|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~l~~~l~~lH~~-----~~ivH~dlkp 132 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKGLTYLREK-----HKIMHRDVKP 132 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhc-----CCEEecCCCh
Confidence 45889999988 88999999876689999999999 7999999999986 4799999987
No 113
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.58 E-value=0.0016 Score=53.59 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=50.0
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|.+++..++ .|+..+++.++ .+|+..|.+.|+. +.+|++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~~~H~dl~p 135 (270)
T cd05056 78 ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYS-YQLSTALAYLESK------RFVHRDIAA 135 (270)
T ss_pred CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccccCh
Confidence 35678999987 679999998777 79999999999 7999999999988 999999987
No 114
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=96.58 E-value=0.0015 Score=53.68 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=50.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|.+.+..+. .++..+++.++ .||+..|.+.|+. +.+|+||+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lH~~------~i~H~dlkp 132 (263)
T cd05052 73 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA-TQISSAMEYLEKK------NFIHRDLAA 132 (263)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEeecccCc
Confidence 345678999987 689999988765 69999999999 6999999999988 999999987
No 115
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.57 E-value=0.0016 Score=55.82 Aligned_cols=56 Identities=14% Similarity=0.072 Sum_probs=49.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|.+++..+. .|+..+++.++ .|++..|.+.|+. +.+||||+|
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~-~qi~~~L~~LH~~------~iiH~dlkp 129 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYIL-QGVLKALDYIHHM------GYVHRSVKA 129 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHC------CEecCCCCh
Confidence 46789999998 579999987653 69999999999 7999999999988 999999987
No 116
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=96.57 E-value=0.0017 Score=52.54 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=50.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|...+.... .|+..+++.+. .+++..|.+.|+. +.+|++|+|
T Consensus 63 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~~~H~dl~p 121 (250)
T cd05085 63 QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFA-LDAAAGMAYLESK------NCIHRDLAA 121 (250)
T ss_pred cCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecccCh
Confidence 345789999997 689998887666 79999999999 7999999999988 999999987
No 117
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.56 E-value=0.0019 Score=55.31 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=51.5
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...|.++|||.++.+|.+++.....++...++.++ .|+++.|.+.|+. +.+|++|++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~-~ql~~aL~~LH~~------~i~H~dl~~ 147 (335)
T PTZ00024 91 EGDFINLVMDIMASDLKKVVDRKIRLTESQVKCIL-LQILNGLNVLHKW------YFMHRDLSP 147 (335)
T ss_pred cCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecccccH
Confidence 45689999999999999999855589999999999 7999999999988 999999876
No 118
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.55 E-value=0.0019 Score=55.46 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|...+...+.|+...+..++ .|++..|.+.|+. +.+||||+|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 128 (323)
T cd05584 71 TGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYL-SEISLALEHLHQQ------GIIYRDLKP 128 (323)
T ss_pred cCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 345789999987 57999888866689999999888 6999999999998 999999987
No 119
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=96.54 E-value=0.002 Score=52.88 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=51.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|.+.+..+. +|+...++.++ .++++.+.+.|+. +.+|++|+|
T Consensus 76 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~Lh~~------~i~H~di~p 134 (266)
T cd05033 76 KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGML-RGIASGMKYLSEM------NYVHRDLAA 134 (266)
T ss_pred cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCc
Confidence 446789999988 679999998776 89999999999 7999999999998 999999987
No 120
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=96.53 E-value=0.0022 Score=52.29 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=50.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-++|||.+ |.+|.+++.... .++..+++.++ .+++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 128 (256)
T cd05114 70 QQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMC-QDVCEGMEYLERN------SFIHRDLAA 128 (256)
T ss_pred cCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH-HHHHHHHHHHHHC------CccccccCc
Confidence 345679999999 689999887655 89999999999 7999999999988 999999987
No 121
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.53 E-value=0.0016 Score=57.07 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=49.4
Q ss_pred eeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+-|+|||.++.+|..++...+.|+...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~------~ivH~dlkp 131 (372)
T cd07853 78 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFL-YQILRGLKYLHSA------GILHRDIKP 131 (372)
T ss_pred eEEEEeeccccCHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeCCCCCh
Confidence 67999999999999988755589999999999 7999999999998 999999987
No 122
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.53 E-value=0.0023 Score=52.94 Aligned_cols=57 Identities=11% Similarity=0.138 Sum_probs=51.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++...+ .|+...+..++ .|++..|.+.|+. +.+|++++|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lh~~------~i~h~dl~p 131 (280)
T cd06611 73 YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVC-RQMLEALNFLHSH------KVIHRDLKA 131 (280)
T ss_pred cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCh
Confidence 346789999998 569999998877 89999999999 6999999999998 999999876
No 123
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.52 E-value=0.0019 Score=53.93 Aligned_cols=57 Identities=18% Similarity=0.064 Sum_probs=50.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|...+...+.++...+..++ .||+..|.+.|+. +.+|++|+|
T Consensus 68 ~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~-~ql~~~l~~lH~~------~i~H~di~p 125 (278)
T cd05606 68 TPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYA-AEIILGLEHMHNR------FVVYRDLKP 125 (278)
T ss_pred cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEEcCCCCH
Confidence 456789999987 78999888755589999999999 7999999999998 899999987
No 124
>KOG0616|consensus
Probab=96.52 E-value=0.0022 Score=57.74 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=54.1
Q ss_pred cCCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 7 HNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 7 ~~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+...++=|||||.. |..|..++.+|++||.+...=.| .+++..|+++|.. ..+.||+||
T Consensus 113 ~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYA-AeivlAleylH~~------~iiYRDLKP 172 (355)
T KOG0616|consen 113 FKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYA-AEIVLALEYLHSL------DIIYRDLKP 172 (355)
T ss_pred eccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHH-HHHHHHHHHHHhc------CeeeccCCh
Confidence 34568899999986 59999999999999999999999 7999999999999 999999997
No 125
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.51 E-value=0.0022 Score=53.69 Aligned_cols=56 Identities=20% Similarity=0.106 Sum_probs=49.2
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++-|+|||.+ |.+|...+..++.|+...+..++ .||+..|.+.|.. +.+|+||+|
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~-~qi~~al~~lH~~------~ivH~dikp 125 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYA-TEIILGLEHMHNR------FVVYRDLKP 125 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcCCCCCCH
Confidence 45678999976 58898888766689999999999 7999999999998 899999987
No 126
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=96.49 E-value=0.0019 Score=52.79 Aligned_cols=57 Identities=11% Similarity=0.142 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+||+.+ |.+|.+++..+. .++..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~al~~lH~~------~i~H~di~p 130 (260)
T cd05070 71 SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMA-AQVAAGMAYIERM------NYIHRDLRS 130 (260)
T ss_pred CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCcc
Confidence 345678999988 679999887653 69999999999 6999999999998 899999987
No 127
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=96.48 E-value=0.002 Score=54.18 Aligned_cols=56 Identities=11% Similarity=0.005 Sum_probs=49.2
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++|||.+ |.+|.......+ .|+..+++.++ .||+..|.+.|+. +.+|++|+|
T Consensus 72 ~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~iiH~dikp 130 (285)
T cd05630 72 KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYA-AEICCGLEDLHQE------RIVYRDLKP 130 (285)
T ss_pred CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHhC------CEEeCCCCH
Confidence 46789999987 799988876554 69999999999 6999999999988 999999987
No 128
>KOG0615|consensus
Probab=96.48 E-value=0.002 Score=59.96 Aligned_cols=57 Identities=7% Similarity=-0.010 Sum_probs=48.7
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+|-|||||..+ -||-+-.-.++.+..-+---+. .|||..+.+.|.. ++.||||||
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f-~Qll~avkYLH~~------GI~HRDiKP 304 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLF-KQLLTAVKYLHSQ------GIIHRDIKP 304 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHhccccccchhHHHH-HHHHHHHHHHHHc------CcccccCCc
Confidence 4577899999985 7887777766667777778888 6999999999999 999999998
No 129
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=96.47 E-value=0.0023 Score=52.27 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=50.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...|.++|||.+ |.+|..++...+.|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~l~~~l~~lH~~------~ivH~di~p 134 (267)
T cd06628 77 DADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFV-RQILKGLNYLHNR------GIIHRDIKG 134 (267)
T ss_pred eCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHH-HHHHHHHHHHHhc------CcccccCCH
Confidence 356889999988 77999999866689999999999 7999999999988 999999886
No 130
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.46 E-value=0.0018 Score=53.04 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=50.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|.+.+.... +++..+++.++ .++++.+.+.|+. +.+|+||+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 131 (261)
T cd05068 72 LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMA-AQVASGMAYLEAQ------NYIHRDLAA 131 (261)
T ss_pred cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeeccCCc
Confidence 345689999999 999999997654 79999999999 6999999999998 999999987
No 131
>KOG0594|consensus
Probab=96.44 E-value=0.0019 Score=58.16 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=62.0
Q ss_pred eeEEeeccccccHHHHHHHcC----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKFGSDLQKLLDEHK----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDL 87 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l 87 (186)
-=+|||+.+-.||.+..+.++ ..+..+|..+. .|+|..|.+.|++ +.+|||+||+-.. +.+
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m-~Qll~gl~~~H~~------~IlHRDLKPQNlL----i~~---- 155 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFM-RQLLRGLAFLHSH------GILHRDLKPQNLL----ISS---- 155 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecccCCcceEE----ECC----
Confidence 445899999999999999887 27778899999 7999999999999 9999999984221 000
Q ss_pred HHHHHHHhhHhHHHHhh
Q psy13596 88 TQALVDHLNVGVAQAYL 104 (186)
Q Consensus 88 ~~~Lv~~Ln~gvs~~y~ 104 (186)
...+...|||++.+|.
T Consensus 156 -~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 156 -SGVLKLADFGLARAFS 171 (323)
T ss_pred -CCcEeeeccchHHHhc
Confidence 2234778999999877
No 132
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.43 E-value=0.002 Score=54.26 Aligned_cols=58 Identities=9% Similarity=0.122 Sum_probs=49.1
Q ss_pred CCCeeeEEeeccccccHHHHHHHc--------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFGSDLQKLLDEH--------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG~dL~~l~~~~--------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..+-++|||.++.+|..++... . .++..++..++ .|++..|.+.|+. +.+||||||
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~aL~~lH~~------~ivH~Dlkp 136 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLL-YQILDGIHYLHAN------WVLHRDLKP 136 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHH-HHHHHHHHHHHhC------CEEcCCCCH
Confidence 345677999999999999887632 1 47888899999 7999999999998 999999987
No 133
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.43 E-value=0.0022 Score=53.71 Aligned_cols=62 Identities=8% Similarity=0.086 Sum_probs=51.3
Q ss_pred ccccCCCeeeEEeeccccccHHHHHHHc----C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 4 QQEHNGNSYRFIIISKFGSDLQKLLDEH----K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 4 ~~~~~~~~yrfmVmerlG~dL~~l~~~~----~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..++..+-|||||.++.+|..++... + .|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~i~h~dlkp 136 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL-WQILNGVHYLHSN------WVLHRDLKP 136 (316)
T ss_pred EEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHH-HHHHHHHHHHHhC------CEeeCCCCH
Confidence 3344445788999999999998877643 2 58899999999 7999999999988 899999986
No 134
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.42 E-value=0.0029 Score=52.78 Aligned_cols=57 Identities=11% Similarity=0.107 Sum_probs=49.5
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.++.+|........ .++...+..++ .|+++.|.+.|.. +.+|++|+|
T Consensus 74 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~i~H~dlkp 131 (291)
T cd07870 74 TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFM-FQLLRGLAYIHGQ------HILHRDLKP 131 (291)
T ss_pred cCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCh
Confidence 446889999999999887766555 78888899999 7999999999998 999999987
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.42 E-value=0.003 Score=51.76 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=50.3
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.++ .+|.+++...+.++..++..++ .|++..|.+.|+. +.+|++++|
T Consensus 77 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dl~p 134 (267)
T cd06646 77 SREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVC-RETLQGLAYLHSK------GKMHRDIKG 134 (267)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCCH
Confidence 3467899999986 6899988766689999999999 6999999999988 999999886
No 136
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.41 E-value=0.0025 Score=53.50 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=51.4
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.++.+|..++.... .|+..++..++ .+++..|.+.|+. .+.+|++|+|
T Consensus 86 ~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~-~~i~~~l~~lH~~-----~~i~H~dl~p 143 (296)
T cd06618 86 DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMT-VAIVKALHYLKEK-----HGVIHRDVKP 143 (296)
T ss_pred CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhh-----CCEecCCCcH
Confidence 45789999999999999999866 89999999999 7999999999985 4899999886
No 137
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.40 E-value=0.0024 Score=52.33 Aligned_cols=56 Identities=16% Similarity=0.209 Sum_probs=51.4
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+||+.++.+|..++...+ .|+...++.++ .+++..|.+.|.. +.+|++|+|
T Consensus 72 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~-~~i~~al~~LH~~------~~~h~dl~p 128 (287)
T cd07840 72 KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYM-KQLLEGLQYLHSN------GILHRDIKG 128 (287)
T ss_pred CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CceeccCcH
Confidence 47899999999999999998776 89999999999 7999999999998 899999886
No 138
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.39 E-value=0.0028 Score=52.00 Aligned_cols=56 Identities=14% Similarity=0.209 Sum_probs=52.1
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||..+.+|.+++..++ .++...++.++ .+++..|.+.|.. +.+|++|+|
T Consensus 70 ~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~~l~~ 126 (282)
T cd07829 70 ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIM-YQLLRGLAYCHSH------RILHRDLKP 126 (282)
T ss_pred CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCh
Confidence 47899999999999999999886 89999999999 6999999999999 899999886
No 139
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=96.38 E-value=0.0032 Score=51.39 Aligned_cols=57 Identities=9% Similarity=0.076 Sum_probs=51.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|+|||.+ |.+|..++..++.++...+..++ .|++..|.+.|.. +.+|++++|
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~lH~~------~i~H~dl~p 125 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYI-AEVVLGVEDLHQR------GIIHRDIKP 125 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 346789999999 78999999877789999999999 6999999999998 999999876
No 140
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.36 E-value=0.0027 Score=53.62 Aligned_cols=56 Identities=13% Similarity=0.245 Sum_probs=49.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..+.. .++|+...++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~-~qi~~~l~~LH~~------~ivH~dlkp 146 (292)
T cd06658 90 VGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVC-LSVLRALSYLHNQ------GVIHRDIKS 146 (292)
T ss_pred cCCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeecCCCH
Confidence 457889999999 678888764 3489999999999 7999999999998 899999987
No 141
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=96.36 E-value=0.0032 Score=52.38 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=49.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-----------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-----------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-----------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..+...+. .|+..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~al~~LH~~------~i~H~dlkp 158 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMA-TQIASGMRYLESL------NFVHRDLAT 158 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHH-HHHHHHHHHHHHc------Cccccccch
Confidence 36889999987 589998887654 68999999999 7999999999988 999999987
No 142
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=96.35 E-value=0.0035 Score=50.67 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=50.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|.+++..+ + .++..++..++ .+++..|.+.|.. +.+|++++|
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~-~~l~~al~~lH~~------~i~h~dl~~ 129 (256)
T cd08529 70 DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF-IQILLGLAHLHSK------KILHRDIKS 129 (256)
T ss_pred cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCc
Confidence 346789999987 89999999876 4 79999999999 7999999999988 999999886
No 143
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.35 E-value=0.0026 Score=53.13 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=50.4
Q ss_pred CCeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++.+|...+..++ .++..++..++ .|++..|.+.|.. +.+|++|+|
T Consensus 72 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~------~i~H~dl~p 130 (294)
T PLN00009 72 SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYL-YQILRGIAYCHSH------RVLHRDLKP 130 (294)
T ss_pred cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHH-HHHHHHHHHHHhC------CeeCCCCCc
Confidence 456899999999999999887665 47889999999 6999999999988 899999987
No 144
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=96.35 E-value=0.0024 Score=52.91 Aligned_cols=55 Identities=18% Similarity=0.079 Sum_probs=47.0
Q ss_pred eeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+++|+.+ |.+|.+++..+. .|+..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~iiH~dlkp 137 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC-VQIAKGMSYLEEV------RLVHRDLAA 137 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHC------Ceecccccc
Confidence 4567888754 567888887665 89999999999 7999999999998 999999987
No 145
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=96.34 E-value=0.0019 Score=52.18 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=57.8
Q ss_pred eEEeecccccc--HHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFGSD--LQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 13 rfmVmerlG~d--L~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
.|||||.++.. +..+.. .+.++...++.++ .+++..+.+.|+. ++.+||||+|.-.. + . +.
T Consensus 92 ~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~-~~l~~~l~~lH~~-----~givHrDlkP~NIl----l-~-----~~ 154 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELY-EQVVEQMRRLYQE-----AGLVHGDLSEYNIL----Y-H-----DG 154 (190)
T ss_pred CEEEEEEecCCCchhhhhh-hccCCHHHHHHHH-HHHHHHHHHHHHh-----CCEecCCCChhhEE----E-E-----CC
Confidence 58999999754 233332 2378889999999 7999999999994 39999999982100 0 0 11
Q ss_pred HHHHhhHhHHHHhhhhhhhh
Q psy13596 91 LVDHLNVGVAQAYLNQKKLD 110 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie 110 (186)
-+..+|+|++....++...+
T Consensus 155 ~~~liDFG~a~~~~~~~~~~ 174 (190)
T cd05145 155 KPYIIDVSQAVELDHPNALE 174 (190)
T ss_pred CEEEEEcccceecCCCCHHH
Confidence 24568999998877765553
No 146
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=96.33 E-value=0.0033 Score=52.43 Aligned_cols=56 Identities=9% Similarity=0.112 Sum_probs=48.8
Q ss_pred CeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|.++... ++ +|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~ivH~dlkp 156 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYIL-YGALLGLQHLHNN------RIIHRDVKG 156 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 35789999998 7899887653 45 89999999999 7999999999988 999999987
No 147
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.32 E-value=0.0034 Score=51.46 Aligned_cols=56 Identities=20% Similarity=0.144 Sum_probs=49.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|.+.+...+.++...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 78 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~H~dl~p 134 (265)
T cd06652 78 ERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYT-RQILEGVSYLHSN------MIVHRDIKG 134 (265)
T ss_pred CceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CEecCCCCH
Confidence 45678999999 68999988765688999999999 6999999999988 899999886
No 148
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.31 E-value=0.0035 Score=50.47 Aligned_cols=57 Identities=11% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+||+.+ |.+|.+.+...+.++...+..+. .|++..|.+.|.. +.+|.+|+|
T Consensus 64 ~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lh~~------~~~H~~l~p 121 (250)
T cd05123 64 TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYA-AEIVLALEYLHSL------GIIYRDLKP 121 (250)
T ss_pred cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CceecCCCc
Confidence 567899999999 99999998865589999999999 6999999999998 999999886
No 149
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.30 E-value=0.0029 Score=51.55 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=48.3
Q ss_pred eeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.++|||.+ |.+|.+++..++ +++..+++.++ .|++..+.+.|+. +.+|+||+|
T Consensus 71 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~~~H~dl~p 128 (254)
T cd05083 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFS-LDVAEGMEYLESK------KLVHRDLAA 128 (254)
T ss_pred CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccccCc
Confidence 3468999987 579999988654 69999999999 6999999999988 999999987
No 150
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.30 E-value=0.0035 Score=51.16 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+++... + +++..+++.+. .+++..|.+.|+. +.+|++|+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~l~~~l~~LH~~------~i~H~dl~p 131 (261)
T cd05072 72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAEGMAYIERK------NYIHRDLRA 131 (261)
T ss_pred CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------Ceeccccch
Confidence 456789999987 78999988754 4 79999999999 7999999999988 999999987
No 151
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.30 E-value=0.0028 Score=55.01 Aligned_cols=54 Identities=17% Similarity=0.284 Sum_probs=48.5
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+||+.+|.+|..+.. .+.|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 93 ~~~~lv~e~~~~~l~~~~~-~~~l~~~~~~~i~-~qi~~al~~LH~~------gi~H~dlkp 146 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMK-HEKLSEDRIQFLV-YQMLKGLKYIHAA------GIIHRDLKP 146 (343)
T ss_pred ceEEEEEecCCCCHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 3569999999999999886 2389999999999 7999999999998 999999986
No 152
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.28 E-value=0.0031 Score=52.77 Aligned_cols=57 Identities=23% Similarity=0.241 Sum_probs=49.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc---------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH---------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~---------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
+..+.|+|||.+ |.+|.+.+... . .|+..+++.++ .++++.|.+.|.. +.+|++|+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~i~~al~~lH~~------~i~H~dlk 150 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA-SQIASGMVYLASQ------HFVHRDLA 150 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecccC
Confidence 456789999998 79999988643 2 48899999999 7999999999988 99999998
Q ss_pred h
Q psy13596 72 G 72 (186)
Q Consensus 72 ~ 72 (186)
|
T Consensus 151 p 151 (291)
T cd05094 151 T 151 (291)
T ss_pred c
Confidence 7
No 153
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.24 E-value=0.0038 Score=51.93 Aligned_cols=57 Identities=16% Similarity=0.259 Sum_probs=49.4
Q ss_pred CCeeeEEeeccccccHHHHHHHc----C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEH----K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~----~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+-|+|||.++.+|...+... + .|+...++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 77 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~------~i~H~dl~~ 138 (295)
T cd07837 77 GKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFM-YQLLKGVAHCHKH------GVMHRDLKP 138 (295)
T ss_pred CCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCh
Confidence 44567999999999998887653 3 58999999999 7999999999988 999999886
No 154
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=96.24 E-value=0.0038 Score=52.92 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=48.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC----------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK----------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~----------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
...+.|+|||.+ |.+|.+++..++ .|+..+++.++ .||+..|.+.|+. +.+|+||+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~al~~LH~~------gi~H~dlk 151 (303)
T cd05088 79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA-ADVARGMDYLSQK------QFIHRDLA 151 (303)
T ss_pred CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH-HHHHHHHHHHHhC------Cccccccc
Confidence 346789999998 689998886432 57899999999 7999999999988 99999998
Q ss_pred h
Q psy13596 72 G 72 (186)
Q Consensus 72 ~ 72 (186)
|
T Consensus 152 p 152 (303)
T cd05088 152 A 152 (303)
T ss_pred h
Confidence 7
No 155
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=96.22 E-value=0.0036 Score=51.45 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=50.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|.+.+..+++|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dl~~ 136 (272)
T cd06629 79 TEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFT-EQVLEGLAYLHSK------GILHRDLKA 136 (272)
T ss_pred cCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHH-HHHHHHHHHHhhC------CeeecCCCh
Confidence 456789999988 89999999877789999999999 6999999999998 899999876
No 156
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=96.21 E-value=0.0033 Score=51.43 Aligned_cols=57 Identities=11% Similarity=0.138 Sum_probs=49.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.++|||.+ |.+|.+++... + .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~-~~i~~al~~LH~~------~i~H~dl~p 130 (260)
T cd05067 71 TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMA-AQIAEGMAFIERK------NYIHRDLRA 130 (260)
T ss_pred ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHhcC------CeecccccH
Confidence 345789999987 78999887653 4 79999999999 6999999999988 899999987
No 157
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.18 E-value=0.0049 Score=50.53 Aligned_cols=57 Identities=21% Similarity=0.134 Sum_probs=50.1
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++ .+|.+++..++ .|+..+++.++ .+++..|.+.|.. +.+|++|+|
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~~al~~lH~~------~i~H~dlkp 135 (268)
T cd05063 77 KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML-RGIAAGMKYLSDM------NYVHRDLAA 135 (268)
T ss_pred cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------Ceeccccch
Confidence 3457899999886 58999888766 89999999999 7999999999988 899999987
No 158
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.17 E-value=0.0049 Score=50.22 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=51.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.|+|||.+ |.+|...+.....++..+++.+. .+++..|.+.|.. +.+|++++|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~i~~~l~~lh~~------~i~h~dl~~ 128 (258)
T cd05578 71 DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWI-CEIVLALEYLHSK------GIIHRDIKP 128 (258)
T ss_pred CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 567899999988 89999988866689999999999 7999999999988 899999886
No 159
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.16 E-value=0.0032 Score=51.86 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=49.9
Q ss_pred CeeeEEeeccccccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+..+|.+++... + .|+..+++.++ .|++..|.+.|+. .+.+|++|+|
T Consensus 72 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~-----~~i~h~dlkp 132 (283)
T cd06617 72 EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIA-VSIVKALEYLHSK-----LSVIHRDVKP 132 (283)
T ss_pred CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHH-HHHHHHHHHHhhc-----CCeecCCCCH
Confidence 4678999999999999988753 3 69999999999 7999999999986 5899999887
No 160
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=96.16 E-value=0.0035 Score=51.42 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=49.1
Q ss_pred CCeeeEEeecccc-ccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.|+|||.+. .+|.+++... + .++..+++.++ .+++..|.+.|+. +.+|+||+|
T Consensus 71 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~al~~lH~~------~i~H~dl~~ 130 (260)
T cd05069 71 SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMA-AQIADGMAYIERM------NYIHRDLRA 130 (260)
T ss_pred cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEeecccCc
Confidence 3457899999985 5999998764 3 58999999999 7999999999988 899999986
No 161
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.16 E-value=0.0042 Score=50.68 Aligned_cols=56 Identities=11% Similarity=0.095 Sum_probs=49.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|.+++...+ .++..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlkp 130 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS-LDVCEAMEYLEAN------NFVHRDLAA 130 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEeccccch
Confidence 35679999998 479999988655 58999999999 7999999999988 999999987
No 162
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.16 E-value=0.0043 Score=51.71 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=51.1
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+||+.++.+|...+...+ .|+...+..++ .|+++.|.+.|.. +.+|++++|
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~-~~l~~al~~lH~~------~i~H~dl~p 143 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYM-LQLLEGINYLHEN------HILHRDIKA 143 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 45789999999999999888766 89999999999 6999999999998 999999886
No 163
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.15 E-value=0.004 Score=53.54 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=49.4
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.|+||+.++.+|..++. .++|+...+..++ .|++..|.+.|+. +.+||+|+|
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~-~~~l~~~~~~~i~-~ql~~aL~~LH~~------~ivH~dlkp 134 (336)
T cd07849 79 SFNDVYIVQELMETDLYKLIK-TQHLSNDHIQYFL-YQILRGLKYIHSA------NVLHRDLKP 134 (336)
T ss_pred ccceEEEEehhcccCHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 345789999999999988875 3389999999999 7999999999999 999999987
No 164
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=96.14 E-value=0.0048 Score=50.73 Aligned_cols=57 Identities=7% Similarity=-0.039 Sum_probs=47.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.++..... .++..+++.++ .||+..|.+.|+. +.+||||+|
T Consensus 66 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~ivH~dlkp 128 (269)
T cd05042 66 ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMA-CEVASGLLWLHQA------DFIHSDLAL 128 (269)
T ss_pred CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHH-HHHHHHHHHHHhc------CEecccccH
Confidence 346789999999 469999887543 25677888999 7999999999998 999999987
No 165
>KOG0671|consensus
Probab=96.13 E-value=0.0025 Score=58.69 Aligned_cols=51 Identities=12% Similarity=0.245 Sum_probs=48.9
Q ss_pred EeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 15 IIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 15 mVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+|+|+||.|+.+.+..|+ .||...|-.+| .|++..+.+.|.- +.+|-|+||
T Consensus 168 ivfellG~S~~dFlk~N~y~~fpi~~ir~m~-~QL~~sv~fLh~~------kl~HTDLKP 220 (415)
T KOG0671|consen 168 IVFELLGLSTFDFLKENNYIPFPIDHIRHMG-YQLLESVAFLHDL------KLTHTDLKP 220 (415)
T ss_pred EEEeccChhHHHHhccCCccccchHHHHHHH-HHHHHHHHHHHhc------ceeecCCCh
Confidence 699999999999999988 69999999999 7999999999999 999999997
No 166
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.13 E-value=0.0036 Score=53.28 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=49.7
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-|+||+.++.+|..++...+.|+...++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 77 ~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~-~~l~~~l~~LH~~------gi~H~dlkp 131 (330)
T cd07834 77 NDVYIVTELMETDLHKVIKSPQPLTDDHIQYFL-YQILRGLKYLHSA------NVIHRDLKP 131 (330)
T ss_pred cceEEEecchhhhHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 467999999999999988754589999999999 7999999999998 899999987
No 167
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=96.13 E-value=0.0047 Score=51.79 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=48.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.++|||.+ |.+|...+... + .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~------~iiH~dikp 130 (285)
T cd05632 71 TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYA-AEILCGLEDLHRE------NTVYRDLKP 130 (285)
T ss_pred cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecCCCH
Confidence 456789999977 46888766544 3 79999999999 7999999999988 999999987
No 168
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=96.12 E-value=0.0053 Score=49.82 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=49.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++||+.+ |.+|..++..+. .|+...+..++ .+++..+.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~h~dl~p 128 (256)
T cd05112 70 ERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMC-LDVCEGMAYLESS------NVIHRDLAA 128 (256)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH-HHHHHHHHHHHHC------Ccccccccc
Confidence 345779999977 678999988766 89999999999 7999999999988 899999886
No 169
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.12 E-value=0.0055 Score=51.80 Aligned_cols=57 Identities=11% Similarity=0.274 Sum_probs=48.4
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC----------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK----------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~----------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
...+.|+|||.++ .+|.+++...+ .++.++++.++ .|+++.|.+.|+. +.+|+||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~------gi~H~dlk 167 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCA-YQVARGMEYLASK------KCIHRDLA 167 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH-HHHHHHHHHHHHC------Cccccccc
Confidence 3457899999985 69999987532 47888999999 7999999999988 99999998
Q ss_pred h
Q psy13596 72 G 72 (186)
Q Consensus 72 ~ 72 (186)
|
T Consensus 168 p 168 (307)
T cd05098 168 A 168 (307)
T ss_pred H
Confidence 7
No 170
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.12 E-value=0.0048 Score=50.95 Aligned_cols=57 Identities=9% Similarity=0.147 Sum_probs=51.4
Q ss_pred CCeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.++.+|..++.... +++..+++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 69 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~~L~~lH~~------~~~H~dl~p 127 (283)
T cd07835 69 SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYL-YQLLQGIAYCHSH------RVLHRDLKP 127 (283)
T ss_pred cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeCCCCCH
Confidence 457899999999999999888665 79999999999 7999999999988 899999876
No 171
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.12 E-value=0.0052 Score=51.13 Aligned_cols=57 Identities=7% Similarity=0.104 Sum_probs=49.8
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+ |.+|..++...+.|+.+.+..++ .+|+..|.+.|+. .+.+|++++|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~-----~~i~H~dl~p 132 (284)
T cd06620 75 ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIA-VAVVEGLTYLYNV-----HRIMHRDIKP 132 (284)
T ss_pred CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHHh-----cCeeccCCCH
Confidence 46899999999 47899988866689999999999 7999999999986 4799999886
No 172
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=96.10 E-value=0.005 Score=50.62 Aligned_cols=60 Identities=20% Similarity=0.138 Sum_probs=50.7
Q ss_pred ccCCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 6 EHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 6 ~~~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
......+.++|||.+ |.+|.+.+...+.++...++.++ .||+..|.+.|.. +.+|++++|
T Consensus 74 ~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~LH~~------~i~H~~l~p 134 (266)
T cd06651 74 RDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYT-RQILEGMSYLHSN------MIVHRDIKG 134 (266)
T ss_pred EcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeeCCCCH
Confidence 333456788999988 57999988765589999999999 7999999999988 899999876
No 173
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=96.08 E-value=0.0043 Score=50.68 Aligned_cols=56 Identities=11% Similarity=0.097 Sum_probs=48.8
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++||+.+ |.+|.+++...+.++..+++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 67 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lh~~------~i~H~di~p 123 (257)
T cd05060 67 GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELA-HQVAMGMAYLESK------HFVHRDLAA 123 (257)
T ss_pred CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHH-HHHHHHHHHHhhc------CeeccCccc
Confidence 45678999975 56899988765589999999999 7999999999988 899999987
No 174
>KOG0669|consensus
Probab=96.08 E-value=0.0032 Score=56.13 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=61.7
Q ss_pred eEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHH-HHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEV-RRKEALSAANDLTQA 90 (186)
Q Consensus 13 rfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~-~rk~a~~s~~~l~~~ 90 (186)
-+|||+++-.||--|+..-. +|+++++-... -..++.|.++|.. +++|||||+--. -.+ +.
T Consensus 99 ~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~M-k~Lm~GL~~iHr~------kilHRDmKaaNvLIt~----------dg 161 (376)
T KOG0669|consen 99 FYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVM-KGLMNGLYYIHRN------KILHRDMKAANVLITK----------DG 161 (376)
T ss_pred eeeeHHHhhhhHHHHhcCccccccHHHHHHHH-HHHHHHHHHHHHh------hHHhhcccHhhEEEcC----------Cc
Confidence 48999999999999999766 99999999999 5899999999999 999999876110 000 23
Q ss_pred HHHHhhHhHHHHhhhhhh
Q psy13596 91 LVDHLNVGVAQAYLNQKK 108 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ 108 (186)
++...|||.+.+|.-.+.
T Consensus 162 ilklADFGlar~fs~~~n 179 (376)
T KOG0669|consen 162 ILKLADFGLARAFSTSKN 179 (376)
T ss_pred eEEeeccccccceecccc
Confidence 455578888877765443
No 175
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.08 E-value=0.0039 Score=53.70 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=49.9
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-+||||.+ |.+|..++..++.++...+..++ .|++..|.+.|+. .+.+|+||+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~-----~~ivH~dlkp 132 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS-IAVLRGLAYLREK-----HQIMHRDVKP 132 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHhhc-----CCEEcCCCCh
Confidence 35679999988 57999999866689999999999 7999999999987 4799999987
No 176
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=96.08 E-value=0.0046 Score=51.68 Aligned_cols=57 Identities=19% Similarity=0.183 Sum_probs=48.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..+....+ .|+..+++.++ .|++..|.+.|+. +.+||+|+|
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ql~~aL~~lH~~------~i~H~dlkp 148 (288)
T cd05093 78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIA-QQIAAGMVYLASQ------HFVHRDLAT 148 (288)
T ss_pred cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeecccCc
Confidence 456889999987 589988876332 48999999999 7999999999988 999999987
No 177
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=96.06 E-value=0.0053 Score=49.58 Aligned_cols=57 Identities=11% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.++|||.+ |.+|.+++... + .++...++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lh~~------~i~h~dl~~ 129 (256)
T cd08220 70 EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFF-VQILLALHHVHTK------LILHRDLKT 129 (256)
T ss_pred cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 456889999999 78999999865 4 69999999999 6999999999998 999999876
No 178
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=96.06 E-value=0.0049 Score=50.56 Aligned_cols=57 Identities=9% Similarity=0.152 Sum_probs=52.0
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++.+|..++..++ .++...++.++ .+++..|.+.|.. +.+|++++|
T Consensus 69 ~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~dl~p 126 (283)
T cd05118 69 HKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYL-YQLLQGLAFCHSH------GILHRDLKP 126 (283)
T ss_pred cCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCcCH
Confidence 347889999999999999999876 89999999999 6999999999998 899999886
No 179
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=96.05 E-value=0.0054 Score=49.72 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=48.9
Q ss_pred CeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.+ |.+|.+.+..+ + .++..++..++ .+++..+.+.|+. +.+|++|+|
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~l~~~l~~lH~~------~i~H~di~p 130 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWF-VQIAMALQYLHEK------HILHRDLKT 130 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCc
Confidence 34678999998 57899888764 3 69999999999 7999999999998 999999986
No 180
>KOG0660|consensus
Probab=96.05 E-value=0.0019 Score=58.71 Aligned_cols=103 Identities=13% Similarity=0.204 Sum_probs=72.6
Q ss_pred eeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQAL 91 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~L 91 (186)
-=++|+|+++.||.+|.+....++..-+--+- +|+|..|.++|++ +.+|||+||.-..=+ + +--
T Consensus 100 DvYiV~elMetDL~~iik~~~~L~d~H~q~f~-YQiLrgLKyiHSA------nViHRDLKPsNll~n----~-----~c~ 163 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKSQQDLTDDHAQYFL-YQILRGLKYIHSA------NVIHRDLKPSNLLLN----A-----DCD 163 (359)
T ss_pred eeEEehhHHhhHHHHHHHcCccccHHHHHHHH-HHHHHhcchhhcc------cccccccchhheeec----c-----CCC
Confidence 34799999999999999954468888777777 7999999999999 999999998321100 0 111
Q ss_pred HHHhhHhHHHHhhhhhhhh-----------HHHHHHHHHHHHHHhhHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLD-----------AEAKQLHTNAITFSKQTQQWL 131 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie-----------~E~K~L~~~Ta~laKqt~qW~ 131 (186)
.-..|||++....+. ..+ =.+=+|.-....|.+..+=|.
T Consensus 164 lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWS 213 (359)
T KOG0660|consen 164 LKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWS 213 (359)
T ss_pred EEeccccceeecccc-CcccchhcceeeeeecCHHHHhccccccchhhhhh
Confidence 256788988876543 111 123345566677777777775
No 181
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.04 E-value=0.0054 Score=50.45 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC---------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK---------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~---------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++-|||||.+ |.+|..++.... .|+...++.+. .|++..|.+.|.. +.+|+||+|
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~-~~l~~~l~~LH~~------~i~H~dlkp 145 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC-TQIALGMDHLSNA------RFVHRDLAA 145 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH-HHHHHHHHHhhhc------CcccCcCcc
Confidence 446789999998 479999887654 58999999999 6999999999988 999999997
No 182
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.03 E-value=0.0046 Score=52.54 Aligned_cols=57 Identities=11% Similarity=0.119 Sum_probs=50.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..+...++.|+...+..++ .|+++.|.+.|+. .+.+|++|+|
T Consensus 71 ~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~-----~~i~H~dl~p 128 (308)
T cd06615 71 DGEISICMEHMDGGSLDQVLKKAGRIPENILGKIS-IAVLRGLTYLREK-----HKIMHRDVKP 128 (308)
T ss_pred CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhh-----CCEEECCCCh
Confidence 46789999987 68999999877789999999999 7999999999985 4799999886
No 183
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.01 E-value=0.0055 Score=50.64 Aligned_cols=57 Identities=12% Similarity=0.207 Sum_probs=50.6
Q ss_pred CCeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+.++.|+|||.++.+|.+.+..+. .++...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lh~~------~i~H~~l~p 128 (284)
T cd07860 70 TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYL-FQLLQGLAFCHSH------RVLHRDLKP 128 (284)
T ss_pred cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 456889999999999998887653 79999999999 7999999999988 899999886
No 184
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.01 E-value=0.0054 Score=52.65 Aligned_cols=58 Identities=9% Similarity=0.162 Sum_probs=49.2
Q ss_pred cCCCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 7 HNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 7 ~~~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+..+.|||||.++.+|...+... .|+...+..++ .||+..|.+.|+. +.+|++|+|
T Consensus 78 ~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~-~qi~~~L~~LH~~------~i~H~dl~p 135 (337)
T cd07852 78 AENDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIM-YQLLKALKYIHSG------NVIHRDLKP 135 (337)
T ss_pred cCCCceEEEEecccccCHHHHHhcC-CCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 3445678999999999998887643 78888888889 7999999999998 999999886
No 185
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=96.00 E-value=0.006 Score=49.53 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=50.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+..+ + .++..+++.++ .|++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~~l~~ 129 (256)
T cd08218 70 ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWF-VQICLALKHVHDR------KILHRDIKS 129 (256)
T ss_pred CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEecCCCCH
Confidence 446899999988 78999998865 4 79999999999 7999999999988 999999876
No 186
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.00 E-value=0.0062 Score=50.88 Aligned_cols=57 Identities=18% Similarity=0.089 Sum_probs=48.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.....|||||.+ |.+|.+++.. .. .|+...+..++ .+++..|.+.|+. +.+|++++|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~-~~i~~~L~~lH~~------~i~H~dl~~ 133 (287)
T cd06621 72 SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIA-ESVLKGLSYLHSR------KIIHRDIKP 133 (287)
T ss_pred CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 344678999998 6899887663 33 79999999999 7999999999998 999999875
No 187
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=95.99 E-value=0.0073 Score=48.10 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=50.7
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..++...+.|+...+..++ .+++..|.+.|+. +.+|++++|
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~~~h~dl~p 129 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYT-RQILEGLAYLHSN------GIVHRDIKG 129 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCCH
Confidence 36789999999 99999998866689999999999 6999999999998 999999876
No 188
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=95.96 E-value=0.0056 Score=50.84 Aligned_cols=57 Identities=11% Similarity=0.018 Sum_probs=48.7
Q ss_pred CeeeEEeeccccccHHHHHHH----cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDE----HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~----~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+||+.++.+|..++.. .+ .|+..++..++ .+++..|.+.|+. .+.+|+||+|
T Consensus 75 ~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~lh~~-----~~i~H~dlkp 136 (288)
T cd06616 75 EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIA-VATVKALNYLKEE-----LKIIHRDVKP 136 (288)
T ss_pred CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhc-----CCeeccCCCH
Confidence 356789999999998887653 23 79999999999 7999999999986 5899999987
No 189
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.96 E-value=0.0065 Score=49.91 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=48.8
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|...+...+.++.+.+..++ .|+++.|.+.|+. +.+|++++|
T Consensus 78 ~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~~i~~al~~LH~~------~i~H~dl~p 134 (264)
T cd06653 78 EKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYT-RQILQGVSYLHSN------MIVHRDIKG 134 (264)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CEecCCCCH
Confidence 34567899998 68999988866689999999999 6999999999988 899999886
No 190
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=95.94 E-value=0.0059 Score=50.64 Aligned_cols=56 Identities=7% Similarity=0.074 Sum_probs=48.3
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.++ .+|..++.... .++..++..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 74 ~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~-~qi~~~L~~LH~~------~i~H~dlkp 131 (282)
T cd06643 74 ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVC-KQTLEALNYLHEN------KIIHRDLKA 131 (282)
T ss_pred CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCc
Confidence 467899999884 67777766555 79999999999 7999999999998 999999986
No 191
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=95.93 E-value=0.0065 Score=51.82 Aligned_cols=57 Identities=14% Similarity=0.132 Sum_probs=51.1
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.++|||.++.+|..++...+ .++..+++.++ .|++..|.+.|.. +.+|++++|
T Consensus 92 ~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~-~qi~~al~~LH~~------gi~H~dl~p 149 (313)
T cd06633 92 KEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT-HGALQGLAYLHSH------NMIHRDIKA 149 (313)
T ss_pred eCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCh
Confidence 347889999999999999998766 89999999999 6999999999988 899999886
No 192
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.93 E-value=0.0057 Score=53.20 Aligned_cols=53 Identities=6% Similarity=0.114 Sum_probs=46.4
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.++.+|...+. ..++...+..+. .||+..|.+.|+. +.+||||+|
T Consensus 99 ~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~-~qi~~~L~~LH~~------~ivHrDlkp 151 (359)
T cd07876 99 QDVYLVMELMDANLCQVIH--MELDHERMSYLL-YQMLCGIKHLHSA------GIIHRDLKP 151 (359)
T ss_pred ceeEEEEeCCCcCHHHHHh--ccCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 3579999999998877653 368999999999 7999999999999 999999987
No 193
>KOG1290|consensus
Probab=95.92 E-value=0.006 Score=58.03 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCCeeeEEeeccccccHHHHHHHcC-C-CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFGSDLQKLLDEHK-E-FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG~dL~~l~~~~~-k-f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.+=-||+|-||.+|-++..+++ + +|+.-|-+|+ .|+|..|-|.|.+ -+++|-||||
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~-~qvL~GLdYLH~e-----cgIIHTDlKP 216 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEIC-RQVLTGLDYLHRE-----CGIIHTDLKP 216 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHH-HHHHHHHHHHHHh-----cCccccCCCc
Confidence 4556678999999999999999999 4 9999999999 7999999999999 8999999997
No 194
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=95.92 E-value=0.0067 Score=49.40 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=49.2
Q ss_pred CeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|.+++... + .|+..+++.++ .+|+..|.+.|.. +.+|++|+|
T Consensus 73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~-~~i~~al~~lh~~------~i~h~di~p 131 (261)
T cd05034 73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMA-AQIAEGMAYLESR------NYIHRDLAA 131 (261)
T ss_pred CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCcch
Confidence 46789999987 67898888764 3 79999999999 6999999999988 899999987
No 195
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=95.92 E-value=0.0059 Score=52.35 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=48.9
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+. .+|.+++.... .++...+..++ .|++..|.+.|+. +.+||||||
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~------~ivHrDlkp 129 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNIL-FGALRGLNYLHQN------GYIHRNIKA 129 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 457799999876 69999888654 69999999999 7999999999988 999999997
No 196
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=95.90 E-value=0.0082 Score=49.67 Aligned_cols=56 Identities=14% Similarity=0.198 Sum_probs=48.9
Q ss_pred CeeeEEeeccccc-cHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGS-DLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~-dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.|+|||.++. +|.+++.... .++...++.+. .|+++.|.+.|+. +.+|++++|
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~------~ivH~dl~~ 149 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYIC-REILRGLAHLHAH------KVIHRDIKG 149 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 5688999999975 9999887643 68899899999 6999999999998 999999886
No 197
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=95.89 E-value=0.0058 Score=49.17 Aligned_cols=55 Identities=18% Similarity=0.293 Sum_probs=49.8
Q ss_pred eeeEEeeccc-cccHHHHHHHcC-C-CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK-E-FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~-k-f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
++.++||+.+ |.+|.+++.... . ++...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~ql~~~l~~lh~~------~~~h~dl~~ 131 (258)
T smart00219 74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFA-LQIARGMEYLESK------NFIHRDLAA 131 (258)
T ss_pred CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHH-HHHHHHHHHHhcC------Ceeeccccc
Confidence 6789999998 789999998655 4 9999999999 6999999999999 999999987
No 198
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=95.89 E-value=0.0079 Score=49.28 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=48.8
Q ss_pred eeeEEeecccc-ccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.++ .+|.+++... + .|+...++.++ .|++..|.+.|+. +.+|++++|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~-~qi~~~l~~LH~~------~ivh~dl~~ 139 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC-REILRGLSHLHQH------KVIHRDIKG 139 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CCccCCCCH
Confidence 57899999996 5999998874 3 79999999999 7999999999998 999999876
No 199
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=95.88 E-value=0.007 Score=49.42 Aligned_cols=57 Identities=9% Similarity=0.104 Sum_probs=50.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.. |.+|..++.....++...+..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 64 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~i~~~l~~lH~~------~~~h~dl~~ 121 (262)
T cd05572 64 DKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYI-ACVVLAFEYLHNR------GIIYRDLKP 121 (262)
T ss_pred cCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhC------CcccCCCCH
Confidence 346789999985 78999998865589999999999 6999999999998 999999876
No 200
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.87 E-value=0.0079 Score=49.87 Aligned_cols=56 Identities=11% Similarity=0.059 Sum_probs=49.0
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|...+...+ .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~------~i~H~di~p 123 (277)
T cd05577 65 KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYA-AQIICGLEHLHQR------RIVYRDLKP 123 (277)
T ss_pred CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 45789999998 579988877655 69999999999 7999999999998 999999886
No 201
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=95.87 E-value=0.0056 Score=56.23 Aligned_cols=56 Identities=13% Similarity=0.173 Sum_probs=48.4
Q ss_pred CeeeEEeeccc-cccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+ |.+|.+.+... . .|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 137 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~-~qi~~aL~~lH~~------~ivHrDlkp 197 (478)
T PTZ00267 137 DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLF-YQIVLALDEVHSR------KMMHRDLKS 197 (478)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhC------CEEECCcCH
Confidence 46789999998 88998876532 2 58899999999 6999999999998 999999997
No 202
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.87 E-value=0.007 Score=51.14 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=50.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++... + .|+...+..++ .|++..|.+.|.. +.+|++|+|
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dlkp 131 (316)
T cd05574 72 TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYA-AEVLLALEYLHLL------GIVYRDLKP 131 (316)
T ss_pred cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCh
Confidence 456889999965 88999998864 4 79999999999 7999999999988 999999986
No 203
>KOG0659|consensus
Probab=95.86 E-value=0.0019 Score=57.44 Aligned_cols=104 Identities=10% Similarity=0.156 Sum_probs=83.4
Q ss_pred eEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQAL 91 (186)
Q Consensus 13 rfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~L 91 (186)
=-+|+|-+-.||+.+.+... -|+..-|-..+ ++||+.+.+.|.+ -.+||||||.-.. -+ ++.+
T Consensus 76 l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~-~m~LkGl~y~H~~------~IlHRDlKPnNLL-----is----~~g~ 139 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKNIILSPADIKSYM-LMTLKGLAYCHSK------WILHRDLKPNNLL-----IS----SDGQ 139 (318)
T ss_pred eEEEEEeccccHHHHhcccccccCHHHHHHHH-HHHHHHHHHHHhh------hhhcccCCccceE-----Ec----CCCc
Confidence 34899999999999999887 79999999999 7999999999999 9999999984221 00 1445
Q ss_pred HHHhhHhHHHHhhhhhhhhH--------HHHHHHHHHHHHHhhHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDA--------EAKQLHTNAITFSKQTQQWLS 132 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~--------E~K~L~~~Ta~laKqt~qW~~ 132 (186)
+..-|||++..|-+..+... .+=+|.=|+..|....+-|+.
T Consensus 140 lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWav 188 (318)
T KOG0659|consen 140 LKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAV 188 (318)
T ss_pred EEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhH
Confidence 56789999999998777763 235667788888888888864
No 204
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=95.86 E-value=0.0082 Score=50.99 Aligned_cols=56 Identities=11% Similarity=0.130 Sum_probs=50.3
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.++.+|..++..++ .|+..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 87 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~-~~l~~~l~~LH~~------~i~H~dl~p 143 (308)
T cd06634 87 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT-HGALQGLAYLHSH------NMIHRDVKA 143 (308)
T ss_pred CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 46789999999999998887777 79999999999 6999999999988 999999886
No 205
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.85 E-value=0.0062 Score=50.50 Aligned_cols=57 Identities=11% Similarity=0.116 Sum_probs=49.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHc--C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH--K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~--~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..+...+ . .|+...+..++ .++++.|.+.|.. .+.+|++|+|
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~-----~~i~H~dl~p 131 (286)
T cd06622 71 EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRIT-YAVVKGLKFLKEE-----HNIIHRDVKP 131 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHH-HHHHHHHHHHHhc-----CCEeeCCCCH
Confidence 46889999988 67998888764 3 79999999999 6999999999975 5899999987
No 206
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=95.85 E-value=0.0089 Score=48.87 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=50.2
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++|||.+ |.+|.+++...+.|+...+..++ .|++..|.+.|.. +.+|++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dl~p 130 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT-KQILDGVAYLHNN------CVVHRDIKG 130 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCcCH
Confidence 47899999987 78999999866689999999999 6999999999988 899999886
No 207
>KOG0595|consensus
Probab=95.84 E-value=0.0066 Score=56.29 Aligned_cols=82 Identities=7% Similarity=0.167 Sum_probs=64.0
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHH-----HHHHHH
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVR-----RKEALS 82 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~-----rk~a~~ 82 (186)
..+|=|||||.+- .||.......+++++.|+-... .|+=+.|...|.. +++|||+||+-.. +..
T Consensus 80 ~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm-~QLA~alq~L~~~------~IiHRDLKPQNiLLs~~~~~~--- 149 (429)
T KOG0595|consen 80 DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFM-QQLASALQFLHEN------NIIHRDLKPQNILLSTTARND--- 149 (429)
T ss_pred cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeccCCcceEEeccCCCCC---
Confidence 3468899999995 9999999988899999999999 6999999999999 9999999984221 110
Q ss_pred HHHHHHHHHHHHhhHhHHHHhhh
Q psy13596 83 AANDLTQALVDHLNVGVAQAYLN 105 (186)
Q Consensus 83 s~~~l~~~Lv~~Ln~gvs~~y~N 105 (186)
+......-|||.|+-..+
T Consensus 150 -----~~~~LKIADFGfAR~L~~ 167 (429)
T KOG0595|consen 150 -----TSPVLKIADFGFARFLQP 167 (429)
T ss_pred -----CCceEEecccchhhhCCc
Confidence 003445568888865544
No 208
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=95.77 E-value=0.0084 Score=51.12 Aligned_cols=56 Identities=14% Similarity=0.141 Sum_probs=50.1
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+..+|..++...+ .++...+..++ .+|+..|.+.|+. +.+|++++|
T Consensus 97 ~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~lH~~------~i~H~dL~p 153 (317)
T cd06635 97 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT-HGALQGLAYLHSH------NMIHRDIKA 153 (317)
T ss_pred CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCc
Confidence 45789999999989999888766 89999999999 6999999999998 999999886
No 209
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=95.76 E-value=0.0083 Score=49.78 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=48.6
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..+.|||||.+ |.+|.+++.. ++++...++.++ .|+++.|.+.|+. +.+|++|+|
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~-~~l~~~l~~lH~~------~i~H~dlkp 135 (283)
T cd05080 78 QGGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFA-QQICEGMAYLHSQ------HYIHRDLAA 135 (283)
T ss_pred CCCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccccCh
Confidence 3456789999976 4688888763 379999999999 7999999999998 999999987
No 210
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.76 E-value=0.0072 Score=50.92 Aligned_cols=56 Identities=11% Similarity=0.270 Sum_probs=47.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHc---------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH---------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~---------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..+...+ + .|+..+++.++ .|+++.|.+.|+. +.+|+||+|
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~------givH~dlkp 165 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCT-YQVARGMEYLASQ------KCIHRDLAA 165 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHH-HHHHHHHHHHHHC------Ceeeccccc
Confidence 45678999988 46999888753 2 47778889999 6999999999998 999999987
No 211
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=95.75 E-value=0.0097 Score=49.22 Aligned_cols=58 Identities=9% Similarity=0.118 Sum_probs=48.9
Q ss_pred CCCeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..+.|+|||.+ |.+|..+... .+ +++...+..++ .|++..|.+.|+. +.+|++++|
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlkp 152 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYIL-HEALMGLQHLHVN------KTIHRDVKG 152 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHH-HHHHHHHHHHHhC------CccccCCCH
Confidence 3456899999988 7899887652 23 68888999999 6999999999998 999999886
No 212
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=95.74 E-value=0.007 Score=49.98 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=47.4
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC----------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK----------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~----------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.+ |.+|.+++..+. .|+..+++.++ .+++..|.+.|+. +.+|+||+|
T Consensus 68 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~al~~lH~~------~i~H~dikp 140 (270)
T cd05047 68 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA-ADVARGMDYLSQK------QFIHRDLAA 140 (270)
T ss_pred CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH-HHHHHHHHHHHHC------CEeeccccc
Confidence 45679999988 578998876432 47888999999 7999999999988 999999987
No 213
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=95.74 E-value=0.0092 Score=49.63 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=48.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.+||||.+ |.+|.+.+..++.|+...+..++ .|++..|.+.|.. ..+|++|+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~------~~~H~dl~p 133 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYI-AEIVLALDHLHQL------GIIYRDIKL 133 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCCH
Confidence 345778999998 46888887755589999999999 6999999999988 999999876
No 214
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=95.72 E-value=0.01 Score=48.14 Aligned_cols=57 Identities=16% Similarity=0.071 Sum_probs=50.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|..++... + .|+..++..+. .|++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~dl~p 129 (256)
T cd08221 70 DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL-FQIVSAVSYIHKA------GILHRDIKT 129 (256)
T ss_pred cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHhC------CccccCCCh
Confidence 346789999998 68999988765 4 79999999999 6999999999988 899999887
No 215
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=95.71 E-value=0.011 Score=47.71 Aligned_cols=57 Identities=23% Similarity=0.180 Sum_probs=50.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+++...+.++...++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~~ 130 (258)
T cd06632 73 EEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYT-RQILLGLEYLHDR------NTVHRDIKG 130 (258)
T ss_pred cCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 346789999999 68999999866679999999999 6999999999988 999999886
No 216
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=95.71 E-value=0.01 Score=50.32 Aligned_cols=57 Identities=14% Similarity=0.201 Sum_probs=48.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|.+++.... .|+..+++.++ .+|+..|.+.|+. +.+|++|+|
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~-~~i~~~l~~lH~~------~ivH~dlkp 169 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS-YQVAKGMAFLASK------NCIHRDLAA 169 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------Ceehhhhcc
Confidence 345789999976 579999887544 49999999999 7999999999998 899999987
No 217
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=95.71 E-value=0.009 Score=48.12 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=49.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHH-----HhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEY-----CYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H-----~~~~~~~~~~~~r~i~~ 72 (186)
+..+-|+|||.+ |.+|.+++..+ + +|+...++.++ .+++..|.+.| .. +.+|++|+|
T Consensus 72 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lH~~~~~~~------~i~h~dl~p 138 (265)
T cd08217 72 SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRIL-TQLLLALYECHNRSDPGN------TVLHRDLKP 138 (265)
T ss_pred CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHhcCccccC------cceecCCCH
Confidence 445679999998 57999998764 4 79999999999 69999999999 66 999999886
No 218
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=95.69 E-value=0.0072 Score=51.80 Aligned_cols=32 Identities=6% Similarity=0.243 Sum_probs=28.8
Q ss_pred CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 34 FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 34 f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|+..+++.++ .|++..|.+.|+. +.+||||||
T Consensus 171 l~~~~~~~~~-~qi~~aL~~LH~~------~ivHrDiKp 202 (338)
T cd05102 171 LTMEDLICYS-FQVARGMEFLASR------KCIHRDLAA 202 (338)
T ss_pred CCHHHHHHHH-HHHHHHHHHHHHC------CEECCCCcc
Confidence 6667788889 7999999999988 999999997
No 219
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.69 E-value=0.0076 Score=52.51 Aligned_cols=53 Identities=8% Similarity=0.125 Sum_probs=46.8
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-|+|||.++.+|...+. ..++...+..++ .||+..|.+.|+. +.+||||+|
T Consensus 102 ~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~-~qi~~aL~~LH~~------~ivH~Dlkp 154 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ--MELDHERMSYLL-YQMLCGIKHLHSA------GIIHRDLKP 154 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH--hcCCHHHHHHHH-HHHHHHHHHHhhC------CeecCCCCH
Confidence 3569999999999888775 268888999999 7999999999998 999999997
No 220
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=95.67 E-value=0.008 Score=51.53 Aligned_cols=56 Identities=11% Similarity=0.001 Sum_probs=47.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|..... .+.|+...++.++ .|++..|.+.|+. +.+||||+|
T Consensus 73 ~~~~~~lv~E~~~~~~L~~~~~-~~~l~~~~~~~~~-~qi~~al~~lH~~------~ivHrdlkp 129 (324)
T cd05589 73 TEDHVCFVMEYAAGGDLMMHIH-TDVFSEPRAVFYA-ACVVLGLQYLHEN------KIVYRDLKL 129 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHhh-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CeEecCCCH
Confidence 346789999986 578876654 2389999999999 7999999999998 999999987
No 221
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=95.65 E-value=0.0098 Score=48.19 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=50.0
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.++ .+|..++...+ +|+..++..+. .|++..|.+.|+. +.+|++++|
T Consensus 72 ~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lh~~------~i~h~dl~p 129 (262)
T cd06613 72 RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVC-RETLKGLAYLHET------GKIHRDIKG 129 (262)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHH-HHHHHHHHHHHhC------CceecCCCh
Confidence 456789999987 69999998875 99999999999 6999999999988 899999886
No 222
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=95.62 E-value=0.01 Score=51.31 Aligned_cols=54 Identities=11% Similarity=0.196 Sum_probs=48.3
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.++.+|.+++. .++|+...+..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 89 ~~~~lv~e~~~~~L~~~~~-~~~l~~~~~~~~~-~qi~~aL~~LH~~------givH~dikp 142 (342)
T cd07854 89 NSVYIVQEYMETDLANVLE-QGPLSEEHARLFM-YQLLRGLKYIHSA------NVLHRDLKP 142 (342)
T ss_pred ceEEEEeecccccHHHHHH-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 4679999999999988875 2389999999999 7999999999988 999999986
No 223
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=95.62 E-value=0.0092 Score=50.08 Aligned_cols=56 Identities=16% Similarity=0.174 Sum_probs=47.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-----------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-----------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-----------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++|||.+ |.+|..++.... .++..+++.++ .|+++.|.+.|+. +.+|++|+|
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~------~i~H~dlkp 158 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMA-TQIASGMKYLSSL------NFVHRDLAT 158 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHH-HHHHHHHHHHHHC------CeecccCCh
Confidence 46789999988 589999887543 35667899999 6999999999998 999999987
No 224
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=95.62 E-value=0.012 Score=47.82 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=50.3
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....++|||.+. .+|.+++.... .++...++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lh~~------~i~H~di~p 130 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFA-LDVCEGMEYLEEK------NFVHRDLAA 130 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhC------Cccchhccc
Confidence 567899999996 69999988765 69999999999 7999999999998 999999987
No 225
>KOG0667|consensus
Probab=95.60 E-value=0.0062 Score=58.69 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=51.2
Q ss_pred eeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+=+||+|+|+.+|-++.+.++ .||++.|-.++ .|||..|.+.|.. ++||=|+||
T Consensus 261 ~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~-~Qil~~L~~L~~l------~IIHcDLKP 317 (586)
T KOG0667|consen 261 NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFA-QQILTALLFLHEL------GIIHCDLKP 317 (586)
T ss_pred cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeeccCCh
Confidence 3457999999999999999988 59999999999 7999999999988 999999998
No 226
>KOG0198|consensus
Probab=95.60 E-value=0.011 Score=52.80 Aligned_cols=64 Identities=17% Similarity=0.083 Sum_probs=53.1
Q ss_pred CcccccCCCeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 2 KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 2 ~G~~~~~~~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|.+......+-.+.||.. |-+|.++....+ +||+..|...+ -|+|..|.++|++ +++|+|||+
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~yt-r~iL~GL~ylHs~------g~vH~DiK~ 145 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYT-RQILEGLAYLHSK------GIVHCDIKP 145 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEeccCccc
Confidence 3443333334677888887 579999999988 99999999999 6999999999988 999999985
No 227
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=95.60 E-value=0.0098 Score=49.02 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=48.4
Q ss_pred CeeeEEeecccc-ccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+. .+|.+++... + .++..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~aL~~lH~~------~i~H~dl~p 130 (262)
T cd05071 72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA-AQIASGMAYVERM------NYVHRDLRA 130 (262)
T ss_pred CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHH-HHHHHHHHHHHHC------CccccccCc
Confidence 456789999884 6999988753 4 68999999999 7999999999998 999999987
No 228
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=95.59 E-value=0.01 Score=48.82 Aligned_cols=57 Identities=5% Similarity=0.025 Sum_probs=48.1
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+...+..-+.... +|+..+++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~ql~~~l~~LH~~------~i~H~dl~p 128 (286)
T cd07847 71 RKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKII-WQTLQAVNFCHKH------NCIHRDVKP 128 (286)
T ss_pred eCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CceecCCCh
Confidence 346789999999766655555455 89999999999 7999999999998 999999987
No 229
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=95.59 E-value=0.011 Score=48.23 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=47.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+... . .|+..+++.++ .+++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~H~dl~p 134 (269)
T cd05044 70 LNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDIC-LDVAKGCVYLEQM------HFIHRDLAA 134 (269)
T ss_pred CCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCh
Confidence 345789999987 67998887642 2 48889999999 7999999999988 899999886
No 230
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=95.58 E-value=0.011 Score=48.13 Aligned_cols=56 Identities=18% Similarity=0.115 Sum_probs=49.6
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|.+.+...+.++...+..++ .+++..|.+.|.. +.+|++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~H~dl~p 132 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYT-RQILEGVEYLHSN------MIVHRDIKG 132 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 35889999998 78999988866689999999999 6999999999998 999999886
No 231
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=95.57 E-value=0.011 Score=48.68 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=49.0
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++.. +.++...++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~-~~i~~~l~~lh~~------~i~H~dl~p 129 (277)
T cd06917 73 KGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVII-REVLVALKYIHKV------GVIHRDIKA 129 (277)
T ss_pred eCCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCcCH
Confidence 456789999988 8899998763 388999999999 6999999999988 999999876
No 232
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=95.57 E-value=0.011 Score=48.49 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC----------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK----------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~----------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++.... .++...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~di~p 147 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMA-AEIADGMAYLAAK------KFVHRDLAA 147 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CccccccCh
Confidence 347899999998 579998886421 36777899999 7999999999988 999999987
No 233
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=95.57 E-value=0.012 Score=48.55 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=50.7
Q ss_pred CeeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....++|||.++.+|.+.+.... .++...++.++ .|+++.|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~Lh~~------~i~H~dl~~ 127 (283)
T cd07830 70 NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSII-YQILQGLAHIHKH------GFFHRDLKP 127 (283)
T ss_pred CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCh
Confidence 56789999999999999988764 78999999999 7999999999998 999999876
No 234
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=95.56 E-value=0.01 Score=48.88 Aligned_cols=56 Identities=14% Similarity=0.253 Sum_probs=49.4
Q ss_pred CeeeEEeeccccccHHHHHHHcC---CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK---EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~---kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.++.+|.+++...+ .|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~h~dl~p 128 (284)
T cd07836 70 ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFT-YQLLKGIAFCHEN------RVLHRDLKP 128 (284)
T ss_pred CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHH-HHHHHHHHHHHHC------CeeeCCCCH
Confidence 46789999999999999887543 58999999999 7999999999988 899999886
No 235
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=95.54 E-value=0.013 Score=48.06 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=46.1
Q ss_pred CeeeEEeecccc-ccHHHHHHH-----cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDE-----HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~-----~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++||+.+. .+|...+.. +. .++..+++.++ .||+..|.+.|+. +.+||||+|
T Consensus 78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlkp 140 (272)
T cd05075 78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFM-TDIASGMEYLSSK------SFIHRDLAA 140 (272)
T ss_pred CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHH-HHHHHHHHHHHHC------Ceeccccch
Confidence 346789999874 688876532 33 58999999999 6999999999998 999999987
No 236
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=95.52 E-value=0.012 Score=49.13 Aligned_cols=56 Identities=14% Similarity=0.123 Sum_probs=50.5
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-+||||.++.+|..++.... .|+...+..++ .|++..|.+.|+. +.+|++++|
T Consensus 88 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~------~i~H~dl~p 144 (302)
T cd07864 88 KGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFM-KQLLEGLNYCHKK------NFLHRDIKC 144 (302)
T ss_pred CCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 34889999999999998888666 89999999999 6999999999999 999999876
No 237
>KOG0662|consensus
Probab=95.51 E-value=0.002 Score=55.13 Aligned_cols=77 Identities=10% Similarity=0.151 Sum_probs=60.8
Q ss_pred EEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy13596 14 FIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALV 92 (186)
Q Consensus 14 fmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv 92 (186)
-+|++-+..||.|.|+.++ -+...+|-.+. +|+|..+-+-|++ ..+|||+||+-..-+ .+.-.
T Consensus 77 tlvfe~cdqdlkkyfdslng~~d~~~~rsfm-lqllrgl~fchsh------nvlhrdlkpqnllin---------~ngel 140 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNGDLDPEIVRSFM-LQLLRGLGFCHSH------NVLHRDLKPQNLLIN---------RNGEL 140 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCCcCCHHHHHHHH-HHHHhhhhhhhhh------hhhhccCCcceEEec---------cCCcE
Confidence 4899999999999999998 89999999999 8999999999999 999999998533111 02223
Q ss_pred HHhhHhHHHHhhhh
Q psy13596 93 DHLNVGVAQAYLNQ 106 (186)
Q Consensus 93 ~~Ln~gvs~~y~Nq 106 (186)
...++|++.+|-=+
T Consensus 141 kladfglarafgip 154 (292)
T KOG0662|consen 141 KLADFGLARAFGIP 154 (292)
T ss_pred EecccchhhhcCCc
Confidence 34578888776543
No 238
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=95.49 E-value=0.0084 Score=51.94 Aligned_cols=53 Identities=6% Similarity=0.117 Sum_probs=46.3
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.++.+|...+. ..++...+..++ .||+..|.+.|+. +.+||||||
T Consensus 95 ~~~~lv~e~~~~~l~~~~~--~~l~~~~~~~~~-~qi~~aL~~LH~~------givHrDikp 147 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQ--MELDHERMSYLL-YQMLCGIKHLHSA------GIIHRDLKP 147 (355)
T ss_pred ceeEEEhhhhcccHHHHHh--hcCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCh
Confidence 4579999999998877664 268888999999 7999999999998 999999987
No 239
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=95.49 E-value=0.011 Score=48.38 Aligned_cols=55 Identities=13% Similarity=0.101 Sum_probs=48.4
Q ss_pred eeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.+ |.+|.+++... + +++..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~aL~~lH~~------~i~H~dl~p 130 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS-AQIAEGMAFIEQR------NYIHRDLRA 130 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHH-HHHHHHHHHHHhC------CccccccCc
Confidence 5679999998 57999998763 4 79999999999 6999999999988 999999987
No 240
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.48 E-value=0.01 Score=51.43 Aligned_cols=53 Identities=4% Similarity=0.108 Sum_probs=47.0
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|||||.++.+|...+.. .|+...+..++ .|++..|.+.|+. +.+|+||+|
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~-~ql~~aL~~LH~~------gi~H~dlkp 146 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQM--DLDHERMSYLL-YQMLCGIKHLHSA------GIIHRDLKP 146 (353)
T ss_pred CcEEEEEeccCCCHHHHHhh--cCCHHHHHHHH-HHHHHHHHHHHhC------CeeeCCCCH
Confidence 46799999999998887753 38999999999 7999999999998 999999987
No 241
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.48 E-value=0.011 Score=50.16 Aligned_cols=56 Identities=11% Similarity=0.270 Sum_probs=47.6
Q ss_pred CeeeEEeeccc-cccHHHHHHHc---------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH---------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~---------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..++... + .++.++++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~------gi~H~dlkp 162 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA-YQVARGMEYLESR------RCIHRDLAA 162 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH-HHHHHHHHHHHHC------Ceeeccccc
Confidence 45789999987 57999888652 2 58888999999 7999999999988 999999987
No 242
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=95.46 E-value=0.01 Score=49.18 Aligned_cols=55 Identities=20% Similarity=0.071 Sum_probs=48.7
Q ss_pred eeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...++||+.+ |.+|.+.+..+. .++...++.++ .||+..|.+.|.. +.+|++|+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~------~i~H~di~p 137 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC-VQIAKGMSYLEEK------RLVHRDLAA 137 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhC------CEEecccCc
Confidence 4567889876 679999888776 89999999999 7999999999998 999999987
No 243
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=95.45 E-value=0.013 Score=47.41 Aligned_cols=57 Identities=16% Similarity=0.071 Sum_probs=51.2
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHH-hhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYC-YQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~-~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+. .+|..++...+.++..+++.++ .|++..+.+.|. . +.+|++|+|
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~l~~~l~~lh~~~------~~~H~~l~~ 128 (264)
T cd06623 70 KEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIA-RQILKGLDYLHTKR------HIIHRDIKP 128 (264)
T ss_pred cCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHhccC------CCccCCCCH
Confidence 3478999999997 8999999866689999999999 799999999999 7 999999876
No 244
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=95.41 E-value=0.013 Score=49.10 Aligned_cols=57 Identities=18% Similarity=0.206 Sum_probs=47.8
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|..++.... .++..+++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~i~~al~~lH~~------~i~H~dlkp 157 (295)
T cd05097 88 SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMA-VQIASGMKYLASL------NFVHRDLAT 157 (295)
T ss_pred CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHH-HHHHHHHHHHHhc------CeeccccCh
Confidence 456889999987 589999886432 36778889999 6999999999998 999999987
No 245
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=95.41 E-value=0.013 Score=49.03 Aligned_cols=56 Identities=13% Similarity=0.238 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++.. ++++...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 87 ~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~-~ql~~~l~~lH~~------~i~H~dl~p 143 (285)
T cd06648 87 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVC-LAVLKALSFLHAQ------GVIHRDIKS 143 (285)
T ss_pred cCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCh
Confidence 346789999988 8899998875 589999999999 6999999999998 999999986
No 246
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=95.40 E-value=0.015 Score=46.64 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=50.0
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+||+.+ |.+|.+++...+.++...+..++ .|++..|.+.|.. +.+|++|+|
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dl~p 127 (254)
T cd06627 71 SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYV-YQVLQGLAYLHEQ------GVIHRDIKA 127 (254)
T ss_pred CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHhhC------CcccCCCCH
Confidence 46789999988 57999999876689999999999 6999999999988 999999886
No 247
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=95.39 E-value=0.013 Score=50.70 Aligned_cols=54 Identities=11% Similarity=0.206 Sum_probs=48.7
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.++||+.+|.+|..++.. ++|+...+..++ .|++..|.+.|.. +.+|++|+|
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~-~ql~~aL~~LH~~------gi~H~dlkp 146 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLV-YQILRGLKYIHSA------GIIHRDLKP 146 (343)
T ss_pred ccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 45899999999999998873 389999999999 7999999999998 899999987
No 248
>PHA02988 hypothetical protein; Provisional
Probab=95.39 E-value=0.013 Score=49.37 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=50.4
Q ss_pred CCCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+..|.+||||.+. .+|..++..++.++..+.+.++ .+++..|.+.|+. .+.+||+|+|
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~-~~i~~~l~~lH~~-----~~~~Hrdlkp 151 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMA-IDCCKGLYNLYKY-----TNKPYKNLTS 151 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHH-HHHHHHHHHHHhc-----CCCCCCcCCh
Confidence 34568899999886 5799998866689999999999 7999999999986 4778999987
No 249
>KOG0600|consensus
Probab=95.38 E-value=0.0083 Score=57.10 Aligned_cols=123 Identities=15% Similarity=0.257 Sum_probs=88.4
Q ss_pred eeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhH-HHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLE-VRRKEALSAANDLTQ 89 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e-~~rk~a~~s~~~l~~ 89 (186)
-=|||+|.+--||--|....+ +|+..-|--+. .|+|..|++.|.. +.+|||||.-- .--+ +
T Consensus 192 siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~m-kQLl~Gl~~cH~~------gvlHRDIK~SNiLidn----------~ 254 (560)
T KOG0600|consen 192 SIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYM-KQLLEGLEYCHSR------GVLHRDIKGSNILIDN----------N 254 (560)
T ss_pred eEEEEEecccchhhhhhcCCCcccChHHHHHHH-HHHHHHHHHHhhc------CeeeccccccceEEcC----------C
Confidence 458999999999999999888 99999999999 6999999999999 99999998510 0001 2
Q ss_pred HHHHHhhHhHHHHhhhhhhhh---------HHHHHHHHHHHHHHhhHHHHH------------------HHHHHHHHHhh
Q psy13596 90 ALVDHLNVGVAQAYLNQKKLD---------AEAKQLHTNAITFSKQTQQWL------------------SLVDNFNSALK 142 (186)
Q Consensus 90 ~Lv~~Ln~gvs~~y~Nqk~ie---------~E~K~L~~~Ta~laKqt~qW~------------------~l~~~~~~~LK 142 (186)
.+...-|||++..|.-...-. =..=+|+-|+..|.--.+-|. .-++++..-.|
T Consensus 255 G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfk 334 (560)
T KOG0600|consen 255 GVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFK 334 (560)
T ss_pred CCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHH
Confidence 234456899998776544321 123456677777777777774 34666666677
Q ss_pred hhcc--HHHHH
Q psy13596 143 EIGD--VENWA 151 (186)
Q Consensus 143 EiGD--veNWa 151 (186)
..|- ...|.
T Consensus 335 lcGSP~e~~W~ 345 (560)
T KOG0600|consen 335 LCGSPTEDYWP 345 (560)
T ss_pred HhCCCChhccc
Confidence 6663 23454
No 250
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.38 E-value=0.011 Score=51.26 Aligned_cols=54 Identities=9% Similarity=0.228 Sum_probs=48.0
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.++|++.+|.+|..++. +++|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 95 ~~~~lv~~~~~~~L~~~~~-~~~l~~~~~~~i~-~qi~~aL~~LH~~------~ivH~dlkp 148 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLI-YQILRGLKYIHSA------DIIHRDLKP 148 (345)
T ss_pred ccEEEEehhcccCHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeecCCCh
Confidence 4568999999999999876 3489999999999 7999999999998 999999886
No 251
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=95.37 E-value=0.013 Score=49.36 Aligned_cols=57 Identities=11% Similarity=0.099 Sum_probs=49.8
Q ss_pred CCeeeEEeecccc-ccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|++||.++ .+|..++... + .++...+..++ .|+++.|.+.|.. +.+|+||+|
T Consensus 70 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~l~~~L~~LH~~------~ivH~dlk~ 129 (314)
T cd08216 70 VDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFIL-KDVLNALDYIHSK------GFIHRSVKA 129 (314)
T ss_pred cCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCc
Confidence 4567899999986 7898888864 4 79999999999 6999999999998 999999986
No 252
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.35 E-value=0.013 Score=47.76 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-++|||.+ |.+|.+++... + .|+...++.++ .++++.|.+.|+. +.+|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~------~i~h~dl~~ 132 (261)
T cd05148 73 VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMA-CQVAEGMAYLEEQ------NSIHRDLAA 132 (261)
T ss_pred cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeccccCc
Confidence 446778999988 56999988764 3 79999999999 6999999999988 899999986
No 253
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=95.32 E-value=0.017 Score=47.82 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=46.8
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC----------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK----------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~----------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+. .+|.+++.... .++.++++.++ .+++..|.+.|+. +.+|++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~~vH~dlkp 147 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMA-GEIADGMAYLNAN------KFVHRDLAA 147 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCcch
Confidence 4467899999864 78998886532 25667899999 7999999999998 999999987
No 254
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=95.32 E-value=0.014 Score=47.47 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=49.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.|+|||.+ |.+|...+... + .|+...++.++ .++++.|.+.|+. +.+|++|+|
T Consensus 69 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~------~i~H~dl~p 128 (255)
T cd08219 69 ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWF-VQMCLGVQHIHEK------RVLHRDIKS 128 (255)
T ss_pred ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHhhC------CcccCCCCc
Confidence 456889999998 67998887654 3 69999999999 7999999999998 999999987
No 255
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=95.32 E-value=0.012 Score=47.87 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=50.7
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-+||||.++ .+|..++.... .|+...+..++ .|+++.|.+.|.. .+.+|++|+|
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~-----~~i~H~dl~~ 129 (265)
T cd06605 71 NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIA-VAVLKGLTYLHEK-----HKIIHRDVKP 129 (265)
T ss_pred CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHH-HHHHHHHHHHcCC-----CCeecCCCCH
Confidence 367899999998 99999999874 89999999999 6999999999993 3999999886
No 256
>PLN00181 protein SPA1-RELATED; Provisional
Probab=95.31 E-value=0.0072 Score=59.03 Aligned_cols=54 Identities=9% Similarity=0.040 Sum_probs=48.3
Q ss_pred eeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.-+++||..|.+|.+++.... .|+...++.+. .||+..|.+.|+. +++||||||
T Consensus 54 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~------gIvHrDlKP 108 (793)
T PLN00181 54 SIVRALECEDVSLRQWLDNPDRSVDAFECFHVF-RQIVEIVNAAHSQ------GIVVHNVRP 108 (793)
T ss_pred hhhhhhccCCccHHHHHhcccccccHHHHHHHH-HHHHHHHHHHHhC------CeeeccCCc
Confidence 346668889999999998656 79999999999 7999999999988 999999998
No 257
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=95.29 E-value=0.014 Score=47.58 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=48.6
Q ss_pred CCeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-++|||.+ |.+|.+++.. .+ .++..++..++ .|+++.|.+.|.. +.+|++|+|
T Consensus 73 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~dl~p 134 (267)
T cd08229 73 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYF-VQLCSALEHMHSR------RVMHRDIKP 134 (267)
T ss_pred eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 346788999988 4799998874 23 68999999999 6999999999988 999999986
No 258
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.29 E-value=0.017 Score=47.85 Aligned_cols=57 Identities=16% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCeeeEEeecccc-ccHHHHHHHc----------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEH----------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVI 70 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~----------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i 70 (186)
...+.++|||.+. .+|.+++... . .++...++.++ .+|+..|.+.|+. +.+|++|
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~i~~al~~lH~~------~i~H~dl 150 (283)
T cd05090 78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA-IQIAAGMEYLSSH------FFVHKDL 150 (283)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHH-HHHHHHHHHHHhc------Ceehhcc
Confidence 3456799999885 6999987522 2 47788889999 7999999999998 8999999
Q ss_pred hh
Q psy13596 71 IG 72 (186)
Q Consensus 71 ~~ 72 (186)
+|
T Consensus 151 kp 152 (283)
T cd05090 151 AA 152 (283)
T ss_pred cc
Confidence 87
No 259
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=95.27 E-value=0.014 Score=48.11 Aligned_cols=56 Identities=16% Similarity=0.170 Sum_probs=48.9
Q ss_pred CeeeEEeeccccccHHHHHHHc--C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEH--K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~--~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+..+|.+.+... + .|+...+..++ .|++..|.+.|.. +.+|++++|
T Consensus 71 ~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~i~H~dl~p 129 (285)
T cd07861 71 ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYL-YQILQGILFCHSR------RVLHRDLKP 129 (285)
T ss_pred CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHH-HHHHHHHHHHHhC------CeeecCCCH
Confidence 4678999999988888887643 2 69999999999 6999999999998 999999987
No 260
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=95.26 E-value=0.014 Score=49.07 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=45.9
Q ss_pred eeeEEeeccc-cccHHHHHHHc------------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEH------------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVI 70 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~------------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i 70 (186)
..-+||||.+ |.+|.++.... . .++..+++.++ .|++..|.+.|.. +.+|+||
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~i~~al~~lH~~------~ivH~dl 164 (304)
T cd05096 92 DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVA-LQIASGMKYLSSL------NFVHRDL 164 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHH-HHHHHHHHHHHHC------CccccCc
Confidence 4579999988 67998887542 1 36777889999 7999999999998 8999999
Q ss_pred hh
Q psy13596 71 IG 72 (186)
Q Consensus 71 ~~ 72 (186)
+|
T Consensus 165 kp 166 (304)
T cd05096 165 AT 166 (304)
T ss_pred ch
Confidence 87
No 261
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=95.23 E-value=0.013 Score=48.91 Aligned_cols=56 Identities=11% Similarity=0.158 Sum_probs=48.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|..++...+ .|+..+++.+. .|++..|.+.|.. +.+|++++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lH~~------~i~H~dlkp 138 (292)
T cd06644 81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVIC-RQMLEALQYLHSM------KIIHRDLKA 138 (292)
T ss_pred CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhcC------CeeecCCCc
Confidence 34678999988 477888777666 89999999999 7999999999988 999999886
No 262
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=95.20 E-value=0.021 Score=46.12 Aligned_cols=57 Identities=21% Similarity=0.176 Sum_probs=49.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.+.+... + .++...++.++ .++++.|.+.|.. +.+|++++|
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~H~dl~~ 129 (257)
T cd08225 70 ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWF-VQISLGLKHIHDR------KILHRDIKS 129 (257)
T ss_pred cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccccCCH
Confidence 346789999998 78999988764 3 69999999999 7999999999988 999999886
No 263
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=95.19 E-value=0.018 Score=48.14 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=46.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC----------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK----------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~----------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+ |.+|...+...+ .++.+.++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~H~dikp 147 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA-AEIADGMAYLNAK------KFVHRDLAA 147 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CCcCCCCCh
Confidence 345789999997 589999987422 24556788888 6999999999988 999999987
No 264
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=95.18 E-value=0.017 Score=47.90 Aligned_cols=56 Identities=20% Similarity=0.169 Sum_probs=48.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|.++.. .++++...+..++ .+++..|.+.|+. +.+|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~i~-~~~l~~~~~~~~~-~~l~~~l~~lh~~------~ivH~dl~p 129 (277)
T cd06640 73 KGTKLWIIMEYLGGGSALDLLR-AGPFDEFQIATML-KEILKGLDYLHSE------KKIHRDIKA 129 (277)
T ss_pred ECCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CccCcCCCh
Confidence 346899999999 678988775 3488999999999 6999999999988 999999886
No 265
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=95.13 E-value=0.019 Score=47.46 Aligned_cols=56 Identities=14% Similarity=0.161 Sum_probs=47.3
Q ss_pred CeeeEEeeccc-cccHHHHHHHc----------------CCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH----------------KEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~----------------~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|.+++..+ ..++..+++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~l~~al~~lH~~------~i~H~dlkp 152 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA-IQIAAGMEYLSSH------HFVHRDLAA 152 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHH-HHHHHHHHHHHhC------Ceecccccc
Confidence 35678999987 57898888754 247788899999 7999999999999 899999987
No 266
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=95.11 E-value=0.019 Score=46.69 Aligned_cols=56 Identities=11% Similarity=0.092 Sum_probs=48.4
Q ss_pred CeeeEEeecccc-ccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+. .+|..++..+ + .|+...++.++ .+++..|.+.|+. +.+|++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~dl~p 134 (267)
T cd08224 74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYF-VQLCSALEHMHSK------RIMHRDIKP 134 (267)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHH-HHHHHHHHHHHhC------CEecCCcCh
Confidence 357899999884 6999988643 3 69999999999 6999999999998 999999886
No 267
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=95.11 E-value=0.019 Score=47.15 Aligned_cols=55 Identities=9% Similarity=0.073 Sum_probs=49.3
Q ss_pred eeeEEeeccccccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.++|||.++.+|.+.+..+. .|+...++.++ .|++..|.+.|+. +.+|++++|
T Consensus 79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~i~~al~~LH~~------~i~h~~l~~ 135 (287)
T cd07838 79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLM-RQLLRGVDFLHSH------RIVHRDLKP 135 (287)
T ss_pred ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeeeccCCh
Confidence 3489999999999999888765 69999999999 7999999999999 899999876
No 268
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=95.10 E-value=0.02 Score=46.15 Aligned_cols=56 Identities=13% Similarity=0.221 Sum_probs=50.3
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.++ .+|.+++..++ .++...+..++ .+++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~~l~~~l~~lh~~------~i~H~dl~~ 127 (256)
T cd06612 70 NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL-YQTLKGLEYLHSN------KKIHRDIKA 127 (256)
T ss_pred CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCc
Confidence 467889999986 79999998777 89999999999 7999999999998 899999876
No 269
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=95.08 E-value=0.019 Score=47.88 Aligned_cols=54 Identities=13% Similarity=0.030 Sum_probs=46.4
Q ss_pred eeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+.++||+.+ |.+|.+++..++ .++...++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~------~iiH~dlkp 137 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWC-VQIAKGMYYLEEH------RMVHRNLAA 137 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHC------CEeccccCc
Confidence 345677654 689999988776 89999999999 7999999999988 899999987
No 270
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=95.08 E-value=0.015 Score=48.00 Aligned_cols=56 Identities=20% Similarity=0.157 Sum_probs=48.4
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++ .+|.+++. .+.++...+..++ .+++..+.+.|+. +.+|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~-~~i~~~l~~lH~~------~ivH~dl~p 129 (277)
T cd06642 73 KGTKLWIIMEYLGGGSALDLLK-PGPLEETYIATIL-REILKGLDYLHSE------RKIHRDIKA 129 (277)
T ss_pred cCCceEEEEEccCCCcHHHHhh-cCCCCHHHHHHHH-HHHHHHHHHHhcC------CeeccCCCh
Confidence 4567899999995 78888875 3489999999999 6999999999988 999999886
No 271
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=95.07 E-value=0.018 Score=49.67 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=47.7
Q ss_pred eeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-++||+.+|.+|..++. .+.|+...+..++ .|+++.|.+.|+. +.+|++|+|
T Consensus 83 ~~~~lv~e~~~~~L~~~~~-~~~~~~~~~~~~~-~ql~~aL~~LH~~------~iiH~dl~p 136 (328)
T cd07856 83 EDIYFVTELLGTDLHRLLT-SRPLEKQFIQYFL-YQILRGLKYVHSA------GVVHRDLKP 136 (328)
T ss_pred CcEEEEeehhccCHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 4678999999999999886 2378988999999 6999999999999 899999886
No 272
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=95.06 E-value=0.02 Score=47.68 Aligned_cols=56 Identities=7% Similarity=0.237 Sum_probs=47.5
Q ss_pred CeeeEEeeccc-cccHHHHHHH---------------cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDE---------------HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~---------------~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|..++.. .+ +|+...++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~LH~~------~ivH~dlkp 160 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA-YQVARGMEFLASK------KCIHRDLAA 160 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH-HHHHHHHHHHHHC------Cccccccce
Confidence 45679999987 5799988863 23 68899999999 7999999999988 999999987
No 273
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.06 E-value=0.019 Score=49.37 Aligned_cols=57 Identities=7% Similarity=0.248 Sum_probs=47.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc---------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH---------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~---------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
...+.|+|||.+ |.+|..++... . +++..+++.++ .|++..|.+.|.. +.+|+||+
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~al~~LH~~------givH~dlk 161 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA-YQVARGMEYLASQ------KCIHRDLA 161 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH-HHHHHHHHHHHHC------Ceeccccc
Confidence 345789999998 46998887642 2 47778889999 7999999999998 99999998
Q ss_pred h
Q psy13596 72 G 72 (186)
Q Consensus 72 ~ 72 (186)
|
T Consensus 162 p 162 (334)
T cd05100 162 A 162 (334)
T ss_pred c
Confidence 7
No 274
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=95.06 E-value=0.018 Score=47.37 Aligned_cols=56 Identities=16% Similarity=0.057 Sum_probs=49.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.++|||.+ |.+|...+..+ .++...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 70 ~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~-~ql~~~l~~lh~~------~i~h~dl~p 126 (274)
T cd06609 70 KGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFIL-REVLLGLEYLHEE------GKIHRDIKA 126 (274)
T ss_pred ECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHH-HHHHHHHHHHHhC------CcccCCCCH
Confidence 347889999988 57999998854 89999999999 6999999999998 899999886
No 275
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.05 E-value=0.019 Score=48.52 Aligned_cols=55 Identities=9% Similarity=0.158 Sum_probs=48.3
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|..+.. .+.|+...++.++ .|++..|.+.|+. +.+|++|+|
T Consensus 89 ~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~-~ql~~aL~~LH~~------gi~H~dLkp 144 (296)
T cd06654 89 GDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVC-RECLQALEFLHSN------QVIHRDIKS 144 (296)
T ss_pred CCEEEEeecccCCCCHHHHHH-hcCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 46889999988 789999875 3378999999999 6999999999998 999999987
No 276
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=95.04 E-value=0.024 Score=47.27 Aligned_cols=57 Identities=12% Similarity=0.217 Sum_probs=47.3
Q ss_pred CCeeeEEeecccc-ccHHHHHHHc------------------------CCCCcchhhcccchhHHHHHHHHHHhhhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEH------------------------KEFSLKNTLTITDFPILKVMSMEYCYQRNWQK 63 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~------------------------~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~ 63 (186)
...+.|+|||.+. .+|.+++... ..|+..+++.++ .|++..|.+.|+.
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~LH~~------ 146 (290)
T cd05045 74 QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFA-WQISRGMQYLAEM------ 146 (290)
T ss_pred cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHH-HHHHHHHHHHHHC------
Confidence 3467899999875 7898887642 147788999999 7999999999988
Q ss_pred hHHHhhhhh
Q psy13596 64 QAVTSVIIG 72 (186)
Q Consensus 64 ~~~~r~i~~ 72 (186)
+.+|++|+|
T Consensus 147 ~ivH~dikp 155 (290)
T cd05045 147 KLVHRDLAA 155 (290)
T ss_pred Ceehhhhhh
Confidence 999999987
No 277
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=94.98 E-value=0.02 Score=46.96 Aligned_cols=57 Identities=23% Similarity=0.218 Sum_probs=48.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-CC--CcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-EF--SLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-kf--~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|...+.... .+ +..+++.++ .|++..|.+.|+. +.+|++++|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~i~h~dl~p 136 (268)
T cd06624 76 ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYT-KQILEGLKYLHDN------QIVHRDIKG 136 (268)
T ss_pred cCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHH-HHHHHHHHHHHHC------CEeecCCCH
Confidence 346789999987 689999887543 55 888888888 6999999999988 999999886
No 278
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=94.91 E-value=0.022 Score=47.93 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=46.7
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC----------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK----------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~----------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-|+|||.+ |.+|.+++..+. .++.++++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~lH~~------~ivH~dlkp 147 (297)
T cd05089 75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA-SDVATGMQYLSEK------QFIHRDLAA 147 (297)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCcCCc
Confidence 35678999986 568988886432 47888999999 7999999999988 999999987
No 279
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=94.91 E-value=0.023 Score=47.24 Aligned_cols=56 Identities=5% Similarity=0.112 Sum_probs=51.4
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+. .+|.+++..++ .|+...++.++ .+++..|.+.|+. +.+|++++|
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~-~~i~~~L~~lH~~------gi~H~dl~p 144 (286)
T cd06614 87 GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVC-REVLQGLEYLHSQ------NVIHRDIKS 144 (286)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHhC------CeeeCCCCh
Confidence 368899999997 99999999888 89999999999 6999999999998 999999876
No 280
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=94.90 E-value=0.021 Score=48.31 Aligned_cols=56 Identities=13% Similarity=0.260 Sum_probs=48.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..++.|+|||.+ |.+|.++.. .++++...+..++ .|++..+.+.|.. +.+|++|+|
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~-~ql~~~l~~lH~~------givH~dl~p 144 (292)
T cd06657 88 VGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVC-LAVLKALSVLHAQ------GVIHRDIKS 144 (292)
T ss_pred eCCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 357899999998 568888764 3489999999999 7999999999998 999999886
No 281
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=94.90 E-value=0.023 Score=46.05 Aligned_cols=55 Identities=9% Similarity=0.019 Sum_probs=48.7
Q ss_pred eeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||.+ |.+|...+.... .++..++..++ .|++..|.+.|.. +.+|++|+|
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~------~i~H~di~p 125 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYA-VQIANGMRYLESK------RFIHRDLAA 125 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHH-HHHHHHHHHHHhC------CccccccCc
Confidence 6779999987 789999887654 68999999999 7999999999998 999999886
No 282
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=94.89 E-value=0.021 Score=58.33 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=49.2
Q ss_pred CCeeeEEeecccc-ccHHHHHHHc----CCCCcchhhcccchhHHHHHHHHHHhh-hhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEH----KEFSLKNTLTITDFPILKVMSMEYCYQ-RNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~----~kf~~ktVl~la~~~ml~~l~~~H~~~-~~~~~~~~~r~i~~ 72 (186)
...+-|||||.+. .+|..++..+ +.|+...|+.|+ .||+..|.+.|+.. ....+.++|+||||
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia-~QIL~ALaYLHs~g~~~~~k~IVHRDLKP 153 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDIT-RQLLHALAYCHNLKDGPNGERVLHRDLKP 153 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHhcccccccCCceeccCcH
Confidence 3456799999985 6999888753 379999999999 79999999999850 00013599999998
No 283
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=94.88 E-value=0.017 Score=48.75 Aligned_cols=54 Identities=17% Similarity=0.058 Sum_probs=47.0
Q ss_pred eeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+.++||+.+. .+|.+.+..+. .|+.+.++.++ .||+..|.+.|+. +.+|++|+|
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~------~ivH~dikp 137 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC-VQIAKGMMYLEER------RLVHRDLAA 137 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHhhc------Ceecccccc
Confidence 4668888774 67888888777 89999999999 7999999999998 999999987
No 284
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=94.88 E-value=0.027 Score=45.89 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=48.3
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
....++||+.+ |.+|.+++...+.|+...++.+. .|++..|.+.|+. +.+|++|+|
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~ql~~al~~LH~~------~i~H~~i~~ 131 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYT-EQLLRGLSYLHEN------QIIHRDVKG 131 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 34567888864 58999999866689999999999 6999999999999 999999886
No 285
>KOG0583|consensus
Probab=94.87 E-value=0.019 Score=52.08 Aligned_cols=78 Identities=6% Similarity=0.049 Sum_probs=58.1
Q ss_pred CeeeEEeeccccc-cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHH
Q psy13596 10 NSYRFIIISKFGS-DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLT 88 (186)
Q Consensus 10 ~~yrfmVmerlG~-dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~ 88 (186)
..+-|||||.+.. ||.+.+...+++++...-.+- .|+++.+.+.|+. +.+|||+|+--...- .
T Consensus 92 ~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F-~Qlisav~y~H~~------gi~HRDLK~ENilld-----~---- 155 (370)
T KOG0583|consen 92 PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYF-RQLISAVAYCHSR------GIVHRDLKPENILLD-----G---- 155 (370)
T ss_pred CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHH-HHHHHHHHHHHhC------CEeeCCCCHHHEEec-----C----
Confidence 3458999999875 888888876699997777788 6999999999999 999999987211100 0
Q ss_pred H-HHHHHhhHhHHHHh
Q psy13596 89 Q-ALVDHLNVGVAQAY 103 (186)
Q Consensus 89 ~-~Lv~~Ln~gvs~~y 103 (186)
+ .-+...|||++...
T Consensus 156 ~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 156 NEGNLKLSDFGLSAIS 171 (370)
T ss_pred CCCCEEEecccccccc
Confidence 0 12444678888776
No 286
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=94.85 E-value=0.022 Score=45.16 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=50.3
Q ss_pred eeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...++||+.++ .+|.+++.... .++...+..++ .|++..|.+.|.. +.+|++|+|
T Consensus 70 ~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lh~~------~i~h~dl~p 126 (253)
T cd05122 70 DELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVC-KELLKGLEYLHSN------GIIHRDIKA 126 (253)
T ss_pred CeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHhhcC------CEecCCCCH
Confidence 67899999998 99999998775 89999999999 6999999999998 899999876
No 287
>KOG0605|consensus
Probab=94.83 E-value=0.025 Score=54.01 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=50.3
Q ss_pred ccCCCeeeEEeeccc-cccHHHHHHHcCCCCcc-hhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 6 EHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLK-NTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 6 ~~~~~~yrfmVmerl-G~dL~~l~~~~~kf~~k-tVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+...+|=|||||-| |-|+-.|+..-+.|++- |=+-|| .|+-.|+.+|+. +++||||||
T Consensus 209 sFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYia--E~vlAI~~iH~~------gyIHRDIKP 269 (550)
T KOG0605|consen 209 SFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIA--ETVLAIESIHQL------GYIHRDIKP 269 (550)
T ss_pred EecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHH--HHHHHHHHHHHc------CcccccCCh
Confidence 455678999999988 89999999977777754 445566 799999999999 999999998
No 288
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=94.79 E-value=0.027 Score=45.34 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=48.9
Q ss_pred CeeeEEeeccc-cccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|...+... + .|+...++.++ .+++..|.+.|.. +.+|++|+|
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~l~~al~~lh~~------~i~h~~l~~ 131 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIF-IQLLRGLQALHEQ------KILHRDLKS 131 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhC------CcccCCCCc
Confidence 47789999988 89999988752 3 68999999999 6999999999988 999999886
No 289
>PHA03210 serine/threonine kinase US3; Provisional
Probab=94.75 E-value=0.019 Score=53.24 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=45.4
Q ss_pred CeeeEEeeccccccHHHHHHHcC-----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.||||+.++.+|...+.... .+..+.+..|+ .|++..|.+.|.. +.+||||||
T Consensus 235 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~-~ql~~aL~yLH~~------gIiHrDLKP 295 (501)
T PHA03210 235 EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIM-KQLLCAVEYIHDK------KLIHRDIKL 295 (501)
T ss_pred CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 46789999999999888765432 23455677788 6999999999998 999999997
No 290
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=94.75 E-value=0.028 Score=44.96 Aligned_cols=56 Identities=13% Similarity=0.129 Sum_probs=49.5
Q ss_pred CeeeEEeeccc-cccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++-++|||.+ |.+|...+... + .|+..+++.++ .+++..|.+.|.. +..|++++|
T Consensus 71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lh~~------~~~H~dl~~ 131 (258)
T cd08215 71 KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF-VQLCLALKYLHSR------KILHRDIKP 131 (258)
T ss_pred CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHH-HHHHHHHHHHHhC------CEecccCCh
Confidence 37889999988 57999998864 4 79999999999 7999999999998 999999876
No 291
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=94.74 E-value=0.026 Score=46.45 Aligned_cols=57 Identities=9% Similarity=-0.057 Sum_probs=46.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcC-----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHK-----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~-----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|..+..... .++..+++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 66 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~------~i~H~dlkp 128 (269)
T cd05087 66 EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMA-CEIALGLLHLHKN------NFIHSDLAL 128 (269)
T ss_pred CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHH-HHHHHHHHHHHHC------CEeccccCc
Confidence 346789999987 478988876432 35667888899 6999999999988 999999987
No 292
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=94.72 E-value=0.024 Score=46.78 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=47.7
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|++++.. |.+|...+..+. .|+..+++.++ .++++.|.+.|+. +.+|++|+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~LH~~------~i~H~di~p 145 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMA-IQIACGMSYLHKR------GVIHKDIAA 145 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHH-HHHHHHHHHHHHC------CEeecccCH
Confidence 45778888876 589999887642 48999999999 7999999999988 999999987
No 293
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=94.71 E-value=0.03 Score=46.55 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=47.3
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC---------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK---------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~---------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+ |.+|..++...+ .++..+++.++ .|++..+.+.|+. +.+|++|+|
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~al~~LH~~------~i~H~dlkp 150 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA-SQIASGMVYLASL------HFVHRDLAT 150 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHH-HHHHHHHHHHHHC------CeecccccH
Confidence 45679999987 578988886532 48889999999 6999999999988 999999987
No 294
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=94.71 E-value=0.021 Score=50.51 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=29.0
Q ss_pred CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 33 EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 33 kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++...++.++ .|+++.|.+.|+. +.+|+||||
T Consensus 210 ~l~~~~~~~~~-~qi~~~l~~lH~~------~ivH~Dlkp 242 (375)
T cd05104 210 ALDTEDLLSFS-YQVAKGMSFLASK------NCIHRDLAA 242 (375)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHHC------CeeccCCch
Confidence 35667788899 7999999999998 999999987
No 295
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=94.68 E-value=0.02 Score=48.38 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=50.0
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-+||||.+..+|..++..+. .++...++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 87 ~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~-~ql~~~L~~LH~~------~i~H~dl~p 143 (307)
T cd06607 87 EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAIC-HGALQGLAYLHSH------ERIHRDIKA 143 (307)
T ss_pred CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHH-HHHHHHHHHHHHC------CceecCCCc
Confidence 35678999999999999988776 89999999999 6999999999988 899999886
No 296
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=94.68 E-value=0.025 Score=47.86 Aligned_cols=55 Identities=9% Similarity=0.198 Sum_probs=47.4
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|+|||.+ |.+|..++. ...|+...++.++ .||+..|.+.|+. +.+|++|+|
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~-~qi~~~L~~LH~~------~ivH~dl~p 145 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIVS-QTRLNEEQIATVC-ESVLQALCYLHSQ------GVIHRDIKS 145 (297)
T ss_pred CCeEEEEEecCCCCCHHHHHh-hcCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 46789999988 478888765 3479999999999 6999999999998 899999886
No 297
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=94.60 E-value=0.019 Score=50.87 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=28.8
Q ss_pred CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 34 FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 34 f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|+...++.++ .||++.|.+.|+. +.+||||+|
T Consensus 209 l~~~~~~~i~-~qi~~aL~yLH~~------giiHrDLkp 240 (374)
T cd05106 209 LDLDDLLRFS-SQVAQGMDFLASK------NCIHRDVAA 240 (374)
T ss_pred cCHHHHHHHH-HHHHHHHHHHHHC------CEEeccCch
Confidence 6667788899 7999999999998 999999987
No 298
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=94.53 E-value=0.025 Score=46.36 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=48.5
Q ss_pred CCeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|+|||.+ |.+|.+++.. .+ .|+...++.++ .|++..|.+.|+. .+.+|++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~-----~~i~H~dl~~ 142 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIF-VQMVLALRYLHKE-----KRIVHRDLTP 142 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHhccC-----CceeecCCCH
Confidence 456889999987 6788887753 34 79999999999 7999999999976 4789999876
No 299
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=94.49 E-value=0.035 Score=45.70 Aligned_cols=56 Identities=9% Similarity=0.152 Sum_probs=48.9
Q ss_pred CeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.|||||-++.++...+.... .++...+..++ .|++..|.+.|+. +.+|+++++
T Consensus 72 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~dl~~ 128 (288)
T cd07833 72 KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYI-WQLLQAIAYCHSH------NIIHRDIKP 128 (288)
T ss_pred CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHC------CeecCCCCH
Confidence 56899999999988777666655 89999999999 7999999999998 899999876
No 300
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=94.44 E-value=0.034 Score=45.37 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=47.2
Q ss_pred CeeeEEeecccc-ccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+. .+|.++... ++ .++...++.++ .++++.|.+.|+. +.+|++|+|
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~H~dl~~ 134 (267)
T cd08228 74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYF-VQLCSAVEHMHSR------RVMHRDIKP 134 (267)
T ss_pred CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHH-HHHHHHHHHHhhC------CeeCCCCCH
Confidence 357789999886 588887763 33 58999999999 7999999999988 999999886
No 301
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=94.43 E-value=0.032 Score=48.23 Aligned_cols=52 Identities=12% Similarity=0.183 Sum_probs=45.6
Q ss_pred eeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..|+||+.++.+|+.+.. ..|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 94 ~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~-~qi~~aL~~LH~~------~i~H~dlkp 145 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMG--HPLSEDKVQYLV-YQMLCGLKYIHSA------GIIHRDLKP 145 (342)
T ss_pred eEEEEecccccCHHHHHc--CCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 459999999998887642 389999999999 7999999999998 899999986
No 302
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=94.42 E-value=0.033 Score=46.00 Aligned_cols=56 Identities=11% Similarity=0.012 Sum_probs=46.1
Q ss_pred CeeeEEeecccc-ccHHHHHHHcC----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHK----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+. .+|........ .++...++.++ .|++..|.+.|+. +.+|+||+|
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~------~i~H~dikp 127 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMA-CEIAAGVTHMHKH------NFLHSDLAL 127 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHH-HHHHHHHHHHHHC------CeeccCCcc
Confidence 457899999985 68988877542 35667788888 6999999999988 899999987
No 303
>KOG0658|consensus
Probab=94.38 E-value=0.015 Score=53.20 Aligned_cols=57 Identities=9% Similarity=0.127 Sum_probs=51.5
Q ss_pred CeeeEEeeccccccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL 73 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~ 73 (186)
.-|-=+|||-+..+|....+. ++ ++|..-|-..+ .|++..|.+.|.. +..||||||+
T Consensus 94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt-~Qlfrgl~yLh~~------~IcHRDIKPq 154 (364)
T KOG0658|consen 94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYT-YQLFRGLAYLHSH------GICHRDIKPQ 154 (364)
T ss_pred hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHH-HHHHHHHHHHHhc------CcccCCCChh
Confidence 347789999999999999885 46 89999999999 7999999999999 9999999995
No 304
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=94.36 E-value=0.039 Score=44.67 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=49.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc---CCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH---KEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~---~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++||+.+ |.+|..++... +.|+...+..+. .|++..|.+.|+. +.+|++++|
T Consensus 70 ~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ql~~al~~lh~~------~i~h~~l~p 130 (267)
T cd06610 70 VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVL-KEVLKGLEYLHSN------GQIHRDIKA 130 (267)
T ss_pred eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 346789999999 78999998764 269999999999 7999999999988 999999886
No 305
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=94.31 E-value=0.035 Score=45.59 Aligned_cols=56 Identities=21% Similarity=0.249 Sum_probs=47.6
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC--------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK--------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~--------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.+||||.+ |.+|.+.....+ +|+...++.+. .+++..+.+.|.. +.+|++|+|
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lH~~------~i~h~dlkp 150 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA-VQIASGMVYLASQ------HFVHRDLAT 150 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHH-HHHHHHHHHHhhC------Ceecccccc
Confidence 36789999987 688988886432 47888899999 6999999999998 999999987
No 306
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=94.29 E-value=0.042 Score=45.72 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=48.2
Q ss_pred CeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.+. .+|.+.+..++.|+..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~al~~lH~~------~i~H~dl~p 133 (290)
T cd05613 77 DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYS-GEIVLALEHLHKL------GIIYRDIKL 133 (290)
T ss_pred CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 356789999984 6888887766689999999999 6999999999988 999999886
No 307
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=94.26 E-value=0.039 Score=46.93 Aligned_cols=53 Identities=19% Similarity=0.047 Sum_probs=44.7
Q ss_pred eEEeec-cccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIIS-KFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVme-rlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++||+ .-|.+|.+.+..+. .++...++.++ .|++..|.+.|+. +.+||||+|
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~------~iiH~dlkp 137 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC-VQIAKGMNYLEER------RLVHRDLAA 137 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHH-HHHHHHHHHHHhc------Ceeccccch
Confidence 345554 45678888888776 89999999999 7999999999998 999999987
No 308
>KOG0589|consensus
Probab=94.25 E-value=0.029 Score=52.32 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=65.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHH-cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh-hHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDE-HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG-LEVRRKEALSAA 84 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~-~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~-~e~~rk~a~~s~ 84 (186)
++-|=++||+.+ |.||-++..+ +| -|+++.++.-- +||+..+.+.|.. ..+|||+|. .....+
T Consensus 75 ~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~-~Q~~~av~ylH~~------~iLHRDlK~~Nifltk------ 141 (426)
T KOG0589|consen 75 DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWF-VQILLAVNYLHEN------RVLHRDLKCANIFLTK------ 141 (426)
T ss_pred CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHH-HHHHHHHHHHHhh------hhhcccchhhhhhccc------
Confidence 345688999988 6898888775 45 79999999999 7999999999966 999999986 444444
Q ss_pred HHHHHHHHHHhhHhHHHHhhhhh
Q psy13596 85 NDLTQALVDHLNVGVAQAYLNQK 107 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y~Nqk 107 (186)
+..|..=|||+|++-.+..
T Consensus 142 ----~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 142 ----DKKVKLGDFGLAKILNPED 160 (426)
T ss_pred ----cCceeecchhhhhhcCCch
Confidence 5556667899998877665
No 309
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.17 E-value=0.042 Score=46.41 Aligned_cols=56 Identities=11% Similarity=0.156 Sum_probs=48.4
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++.. +.++...++.++ .+++..|.+.|+. +.+|++++|
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~-~~l~~~L~~LH~~------~i~H~dL~p 143 (297)
T cd06656 87 VGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVC-RECLQALDFLHSN------QVIHRDIKS 143 (297)
T ss_pred cCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 456889999998 7899988753 368888999999 6999999999998 999999886
No 310
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=94.11 E-value=0.055 Score=44.60 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=46.4
Q ss_pred CCeeeEEeeccccc-cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFGS-DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~-dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|||||.+.. +|..+....+.++...++.++ .|++..|.+.|+. +.+|++++|
T Consensus 71 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~------~i~h~~l~p 128 (286)
T cd07846 71 RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL-FQILRGIEFCHSH------NIIHRDIKP 128 (286)
T ss_pred cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHC------CccccCCCH
Confidence 45688999998875 455444433389999999999 7999999999988 899999876
No 311
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=94.10 E-value=0.042 Score=51.13 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=46.5
Q ss_pred eeEEeeccc-cccHHHHHHHc---C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKF-GSDLQKLLDEH---K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerl-G~dL~~l~~~~---~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+-+||||.+ |.+|.+.+... + .|+...+..++ .|++..|.+.|+. +.+||||||
T Consensus 113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~-~qll~aL~~lH~~------~IiHrDLKP 171 (496)
T PTZ00283 113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLF-IQVLLAVHHVHSK------HMIHRDIKS 171 (496)
T ss_pred EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEecCCCCH
Confidence 568999987 57898877642 3 69999999999 7999999999999 999999997
No 312
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=94.06 E-value=0.051 Score=41.05 Aligned_cols=55 Identities=16% Similarity=0.238 Sum_probs=50.0
Q ss_pred eeeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.|+|||..+ .+|..++..+. .++...+..++ .++++.+.+.|.. +.+|.++++
T Consensus 64 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~~~H~dl~~ 120 (215)
T cd00180 64 NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRIL-LQILEGLEYLHSN------GIIHRDLKP 120 (215)
T ss_pred CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCH
Confidence 68999999999 99999998775 78999999999 6999999999999 999999876
No 313
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=93.88 E-value=0.068 Score=43.27 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=49.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+....++|||.+ |.+|.+++...+.++...+..++ .++++.|.+.|+. +.+|+++++
T Consensus 70 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lh~~------~i~H~dl~~ 127 (264)
T cd06626 70 HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYT-LQLLEGLAYLHSH------GIVHRDIKP 127 (264)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 346788999987 68999998865578999999999 6999999999998 899999876
No 314
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=93.75 E-value=0.059 Score=43.83 Aligned_cols=56 Identities=11% Similarity=0.200 Sum_probs=47.1
Q ss_pred CeeeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++||+.+ |.+|.++..... .++...++.++ .++++.|.+.|+. +.+|++|+|
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dlk~ 126 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFG-LQVAKGMEYLASK------KFVHRDLAA 126 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhC------CccccccCc
Confidence 34577899875 479999888666 67888888899 6999999999988 999999987
No 315
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=93.69 E-value=0.072 Score=43.18 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCeeeEEeecccc-ccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+.++|||.+. .+|.+++.. ++ .|+...+..++ .|++..|.+.|+. +.+|++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~ql~~al~~lH~~------~i~H~~l~p 141 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYIL-RETLRGLAYLHEN------KVIHRDIKG 141 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHHhcC------CcccCCCCH
Confidence 3567899999986 588888764 24 79999999999 6999999999998 999999876
No 316
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=93.51 E-value=0.067 Score=45.24 Aligned_cols=56 Identities=13% Similarity=0.181 Sum_probs=48.3
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.+ |.+|..++.. +.|+...++.+. .+++..|.+.|+. +.+|++|+|
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~-~~l~~al~~LH~~------~i~H~dL~p 143 (296)
T cd06655 87 VGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVC-RECLQALEFLHAN------QVIHRDIKS 143 (296)
T ss_pred cCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHH-HHHHHHHHHHHHC------CcccCCCCH
Confidence 346789999977 7899887763 379999999999 6999999999999 999999987
No 317
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=93.51 E-value=0.074 Score=41.62 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=49.6
Q ss_pred CeeeEEeeccccc-cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGS-DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~-dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++|||.++. +|..++...+.++..+++.+. .+++..|.+.|+. +.+|.+|.|
T Consensus 59 ~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~~i~~ 115 (244)
T smart00220 59 EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYA-RQILSALEYLHSN------GIIHRDLKP 115 (244)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHHc------CeecCCcCH
Confidence 3689999999998 999998865569999999999 6999999999999 999999865
No 318
>KOG0192|consensus
Probab=93.33 E-value=0.049 Score=49.44 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=47.8
Q ss_pred eEEeecccc-ccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhh-HHHhhhhh
Q psy13596 13 RFIIISKFG-SDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQ-AVTSVIIG 72 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~-~~~r~i~~ 72 (186)
-.+|||.+. -+|..+...+ + +|+.++++.+| +++=..|.|.|+. . ++|||+|+
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~a-ldiArGm~YLH~~------~~iIHrDLK~ 171 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIA-LDIARGMEYLHSE------GPIIHRDLKS 171 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHH-HHHHHHHHHHhcC------CCeeecccCh
Confidence 468999885 8999999884 5 89999999999 8999999999999 6 89999986
No 319
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=93.33 E-value=0.065 Score=48.43 Aligned_cols=33 Identities=12% Similarity=0.186 Sum_probs=29.1
Q ss_pred CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 33 EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 33 kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|+...++.++ .|+++.|.+.|.. +.+|++|+|
T Consensus 233 ~l~~~~~~~~~-~qi~~aL~~LH~~------~ivH~dikp 265 (400)
T cd05105 233 GLTTLDLLSFT-YQVARGMEFLASK------NCVHRDLAA 265 (400)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHhC------CeeCCCCCh
Confidence 36677788899 7999999999998 999999987
No 320
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=93.25 E-value=0.054 Score=44.86 Aligned_cols=56 Identities=20% Similarity=0.195 Sum_probs=48.0
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.|+|||.++ .+|..++. ++.++...++.++ .+++..+.+.|+. +..|++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~l~~~i~-~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~dl~p 129 (277)
T cd06641 73 KDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATIL-REILKGLDYLHSE------KKIHRDIKA 129 (277)
T ss_pred eCCeEEEEEEeCCCCcHHHHHh-cCCCCHHHHHHHH-HHHHHHHHHHccC------CeecCCCCH
Confidence 4568999999985 68888776 3389999999999 6999999999988 999999886
No 321
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=93.10 E-value=0.088 Score=43.74 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=45.8
Q ss_pred CeeeEEeecccc-ccHHHHHHHc---------------------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHH
Q psy13596 10 NSYRFIIISKFG-SDLQKLLDEH---------------------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAV 66 (186)
Q Consensus 10 ~~yrfmVmerlG-~dL~~l~~~~---------------------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~ 66 (186)
....++|||.+. .+|....... . .|+...++.++ .+++..|.+.|+. +.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~aL~~lH~~------~i~ 152 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIA-KQVAAGMAYLSER------KFV 152 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHH-HHHHHHHHHHHhC------Cee
Confidence 346799999875 5888887632 1 46777889999 7999999999988 999
Q ss_pred Hhhhhh
Q psy13596 67 TSVIIG 72 (186)
Q Consensus 67 ~r~i~~ 72 (186)
|++|+|
T Consensus 153 H~dl~p 158 (288)
T cd05050 153 HRDLAT 158 (288)
T ss_pred cccccH
Confidence 999987
No 322
>KOG0984|consensus
Probab=93.05 E-value=0.081 Score=46.14 Aligned_cols=53 Identities=8% Similarity=0.116 Sum_probs=48.1
Q ss_pred EEeeccccccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 14 FIIISKFGSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 14 fmVmerlG~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-||..-.||.+++.+ .| ..|+.-+=.|| ..+++.|.+.|.+ -+.+|||+||
T Consensus 121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa-~Svv~al~~L~~k-----L~vIHRDvKP 177 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIA-VSVVHALEFLHSK-----LSVIHRDVKP 177 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhH-HHHHHHHHHHHHH-----hhhhhccCCc
Confidence 57899999999999984 45 78888888999 7999999999999 9999999998
No 323
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=92.93 E-value=0.079 Score=53.78 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=46.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc----------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH----------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~----------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+-|||||.+ |.+|.+++... . .++..+++.++ .|+++.|.+.|+. +.+||||||
T Consensus 73 d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~-~QIa~AL~yLHs~------GIIHRDLKP 141 (932)
T PRK13184 73 DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF-HKICATIEYVHSK------GVLHRDLKP 141 (932)
T ss_pred eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHH-HHHHHHHHHHHHC------CccccCCch
Confidence 346789999987 78999988632 1 35566788899 7999999999998 999999997
No 324
>KOG0614|consensus
Probab=92.85 E-value=0.041 Score=53.03 Aligned_cols=60 Identities=10% Similarity=0.167 Sum_probs=53.7
Q ss_pred ccCCCeeeEEeecc-ccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 6 EHNGNSYRFIIISK-FGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 6 ~~~~~~yrfmVmer-lG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|...+|=||.||- ||-+||.|+...|.|..+|.-=++ ...+..++|.|.+ +++.||+||
T Consensus 488 Tfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~-acv~EAfeYLH~k------~iIYRDLKP 548 (732)
T KOG0614|consen 488 TFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYV-ACVLEAFEYLHRK------GIIYRDLKP 548 (732)
T ss_pred HhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhH-HHHHHHHHHHHhc------CceeccCCh
Confidence 45678899999985 799999999988899999887777 4899999999999 999999997
No 325
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=92.76 E-value=0.084 Score=45.78 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=28.2
Q ss_pred CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 34 FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 34 f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|+...++.++ .|+++.|.+.|+. +++||+|+|
T Consensus 176 ~~~~~~~~~~-~qi~~al~~lH~~------~i~H~dikp 207 (343)
T cd05103 176 LTLEDLICYS-FQVAKGMEFLASR------KCIHRDLAA 207 (343)
T ss_pred CCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCcc
Confidence 5666777888 7999999999988 999999987
No 326
>KOG0575|consensus
Probab=92.60 E-value=0.098 Score=50.57 Aligned_cols=57 Identities=11% Similarity=0.097 Sum_probs=50.7
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+|=|||.|++- .+|-.|.++.+.|++.=|..+. .|++..|.+.|+. +++|||+|.
T Consensus 89 Ds~nVYivLELC~~~sL~el~Krrk~ltEpEary~l-~QIv~GlkYLH~~------~IiHRDLKL 146 (592)
T KOG0575|consen 89 DSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFL-RQIVEGLKYLHSL------GIIHRDLKL 146 (592)
T ss_pred cCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHH-HHHHHHHHHHHhc------Cceecccch
Confidence 4578899999998 7889998855589999999999 6999999999999 899999763
No 327
>KOG0592|consensus
Probab=92.60 E-value=0.083 Score=50.86 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=56.1
Q ss_pred EEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh-HHHHHHHHHHHHHHHHHH
Q psy13596 14 FIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL-EVRRKEALSAANDLTQAL 91 (186)
Q Consensus 14 fmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~-e~~rk~a~~s~~~l~~~L 91 (186)
|+|++.- +-||-++..+-|.|..-.+---| .++|+.|+++|.. ++|||||||- -...+ +.-
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YA-AeIldAleylH~~------GIIHRDlKPENILLd~----------dmh 212 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYA-AEILDALEYLHSN------GIIHRDLKPENILLDK----------DGH 212 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHH-HHHHHHHHHHHhc------CceeccCChhheeEcC----------CCc
Confidence 5666654 46888888888899998888888 6999999999999 9999999982 11222 334
Q ss_pred HHHhhHhHHHHhhh
Q psy13596 92 VDHLNVGVAQAYLN 105 (186)
Q Consensus 92 v~~Ln~gvs~~y~N 105 (186)
+-.-|||.+++...
T Consensus 213 ikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 213 IKITDFGSAKILSP 226 (604)
T ss_pred EEEeeccccccCCh
Confidence 55667888876443
No 328
>KOG0596|consensus
Probab=92.56 E-value=0.11 Score=50.30 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=58.5
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDL 87 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l 87 (186)
+..|=|||||-=-.||.+|++... -.+..-+--+- .|||..+-++|++ ++||.|+||---. +
T Consensus 431 ~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~yw-kqML~aV~~IH~~------gIVHSDLKPANFL----------l 493 (677)
T KOG0596|consen 431 TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYW-KQMLLAVKTIHQH------GIVHSDLKPANFL----------L 493 (677)
T ss_pred cCceEEEEeecccccHHHHHHhccCCCchHHHHHHH-HHHHHHHHHHHHh------ceeecCCCcccEE----------E
Confidence 568999999988899999999766 44434555556 5999999999999 9999999981100 0
Q ss_pred HHHHHHHhhHhHHHHhhh
Q psy13596 88 TQALVDHLNVGVAQAYLN 105 (186)
Q Consensus 88 ~~~Lv~~Ln~gvs~~y~N 105 (186)
-...+..||||+|++-.+
T Consensus 494 VkG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 494 VKGRLKLIDFGIANAIQP 511 (677)
T ss_pred EeeeEEeeeechhcccCc
Confidence 011345688888876443
No 329
>smart00090 RIO RIO-like kinase.
Probab=92.47 E-value=0.038 Score=46.76 Aligned_cols=78 Identities=14% Similarity=0.095 Sum_probs=53.5
Q ss_pred eEEeecccccc-HHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhh-HHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFGSD-LQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQ-AVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 13 rfmVmerlG~d-L~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~-~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
.|||||.++.+ |......+..++...+..++ .|++..+.+.|.. + .+|+||+|.-.. +. ..
T Consensus 123 ~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~------g~iiH~Dikp~NIl----i~------~~ 185 (237)
T smart00090 123 NVLVMEFIGGDGLPAPRLKDVEPEEEEEFELY-DDILEEMRKLYKE------GELVHGDLSEYNIL----VH------DG 185 (237)
T ss_pred ceEEEEEecCCcccccccccCCcchHHHHHHH-HHHHHHHHHHHhc------CCEEeCCCChhhEE----EE------CC
Confidence 58999999974 54443223367777888899 6999999999999 8 999999882110 00 11
Q ss_pred HHHHhhHhHHHHhhhhh
Q psy13596 91 LVDHLNVGVAQAYLNQK 107 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk 107 (186)
-+..+|+|.+....++.
T Consensus 186 ~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 186 KVVIIDVSQSVELDHPM 202 (237)
T ss_pred CEEEEEChhhhccCCcc
Confidence 24457788776655544
No 330
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=92.40 E-value=0.12 Score=42.01 Aligned_cols=57 Identities=14% Similarity=0.104 Sum_probs=46.1
Q ss_pred CCeeeEEeeccc-cccHHHHHHHc-----C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEH-----K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~-----~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+-++|||-+ |.||..++... . +|+..+++.++ .|++..|.+.|.. +.+|+||+|
T Consensus 78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~aL~~lH~~------~i~H~dlkp 141 (273)
T cd05035 78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM-VDIALGMEYLSNR------NFIHRDLAA 141 (273)
T ss_pred cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHH-HHHHHHHHHHHhC------Ceeccccch
Confidence 345678888864 46888776432 2 68999999999 7999999999998 899999987
No 331
>PRK14879 serine/threonine protein kinase; Provisional
Probab=92.40 E-value=0.097 Score=41.83 Aligned_cols=51 Identities=12% Similarity=0.180 Sum_probs=42.7
Q ss_pred eeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...++|||.+ |.+|.++...... ++..++ .++...|.+.|+. +.+|+|++|
T Consensus 72 ~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~-~~i~~~l~~lH~~------~i~H~Dl~p 123 (211)
T PRK14879 72 ENFIIVMEYIEGEPLKDLINSNGM----EELELS-REIGRLVGKLHSA------GIIHGDLTT 123 (211)
T ss_pred CCCEEEEEEeCCcCHHHHHHhccH----HHHHHH-HHHHHHHHHHHhC------CcccCCCCc
Confidence 4578999998 8999999873322 788888 5899999999999 999999876
No 332
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=92.38 E-value=0.13 Score=41.80 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=47.3
Q ss_pred CeeeEEeeccc-cccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++.++|||.+ |.+|..++.. .+ .++....+.++ .|+++.|.+.|+. +.+|++++|
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~------~i~h~~l~~ 134 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWF-IQLLLGVHYMHQR------RILHRDLKA 134 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHH-HHHHHHHHHHHHc------CccccCCCh
Confidence 45678999987 5799887764 23 69999999999 7999999999988 999999876
No 333
>KOG0591|consensus
Probab=92.35 E-value=0.044 Score=49.53 Aligned_cols=134 Identities=11% Similarity=0.130 Sum_probs=87.1
Q ss_pred eEEeecccc-ccHHHHHHH---cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhh-HHHhhhhhhHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFG-SDLQKLLDE---HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQ-AVTSVIIGLEVRRKEALSAAND 86 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~---~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~-~~~r~i~~~e~~rk~a~~s~~~ 86 (186)
=.||||.++ -||..+.+. .+ .||++||..+- .|.+..|...|.+ |-++ .+||||||--. ++.
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f-~QL~~AL~~cH~~---~~r~~VmHRDIKPaNI----Fl~---- 162 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF-VQLCRALYHCHSK---IPRGTVMHRDIKPANI----FLT---- 162 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH-HHHHHHHHHHhcc---ccccceeeccCcchhe----EEc----
Confidence 368999998 789888764 34 69999999999 7999999999995 4443 68999998210 010
Q ss_pred HHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHH-----------HHHHhhHHHHHH-----------------HHHHHH
Q psy13596 87 LTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNA-----------ITFSKQTQQWLS-----------------LVDNFN 138 (186)
Q Consensus 87 l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~T-----------a~laKqt~qW~~-----------------l~~~~~ 138 (186)
++.+|..=|+|+++.+.+...-.. -..|| ..|..-++-|.- -+.++.
T Consensus 163 -~~gvvKLGDfGL~r~l~s~~tfA~----S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~ 237 (375)
T KOG0591|consen 163 -ANGVVKLGDFGLGRFLSSKTTFAH----SLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC 237 (375)
T ss_pred -CCCceeeccchhHhHhcchhHHHH----hhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH
Confidence 144566667888887777544331 01111 345566777752 122333
Q ss_pred HHhhhhccHH-HHHHHHHHHHHHHHHH
Q psy13596 139 SALKEIGDVE-NWAKVIEEDMRLISAA 164 (186)
Q Consensus 139 ~~LKEiGDve-NWa~~iE~D~~~i~~t 164 (186)
+.+ |=||.- -|++.--.|+..|...
T Consensus 238 ~KI-~qgd~~~~p~~~YS~~l~~li~~ 263 (375)
T KOG0591|consen 238 KKI-EQGDYPPLPDEHYSTDLRELINM 263 (375)
T ss_pred HHH-HcCCCCCCcHHHhhhHHHHHHHH
Confidence 333 446765 6777777777765544
No 334
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=92.32 E-value=0.11 Score=45.10 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=29.8
Q ss_pred CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 33 EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 33 kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|+...+..++ .||+..|.+.|.. +++||||+|
T Consensus 169 ~l~~~~~~~~~-~qi~~aL~~lH~~------~ivHrDikp 201 (337)
T cd05054 169 PLTLEDLISYS-FQVARGMEFLASR------KCIHRDLAA 201 (337)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCc
Confidence 46778889999 7999999999988 999999987
No 335
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=92.19 E-value=0.1 Score=43.91 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=47.9
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...+.++|||.+ |.+|..++.. .+|+...++.+. .+++..|.+.|+. +.+|++++|
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~-~~l~~al~~LH~~------gi~H~dL~p 143 (293)
T cd06647 87 VGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVC-RECLQALEFLHSN------QVIHRDIKS 143 (293)
T ss_pred eCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHH-HHHHHHHHHHHhC------CEeeccCCH
Confidence 346889999988 7899888763 378888999999 6999999999988 999999886
No 336
>KOG0598|consensus
Probab=92.13 E-value=0.14 Score=46.78 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=48.7
Q ss_pred CCCeeeEEeecccc-ccHHHHHHHcCCCCcchhh-cccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTL-TITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl-~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.....=|||+|.+. -+|-.-+++.++|++.++. -|| .++..|.+.|++ ++++||+||
T Consensus 95 Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYla--Ei~lAL~~LH~~------gIiyRDlKP 153 (357)
T KOG0598|consen 95 QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLA--EIVLALGYLHSK------GIIYRDLKP 153 (357)
T ss_pred ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHH--HHHHHHHHHHhC------CeeeccCCH
Confidence 34566789999875 5999999988899999764 455 699999999999 999999998
No 337
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=92.10 E-value=0.15 Score=42.14 Aligned_cols=55 Identities=20% Similarity=0.102 Sum_probs=44.4
Q ss_pred eeeEEeeccc-cccHHHHHHH---------------cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDE---------------HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~---------------~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+++|+.+ |.+|..++.. .. .|+..+++.++ .|++..|.+.|.. +.+|+||+|
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ql~~aL~~lH~~------gi~H~dlkp 152 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV-TQIAAGMEFLSSH------HVVHKDLAT 152 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH-HHHHHHHHHHHHc------Cccccccch
Confidence 4577888876 4778887642 12 47888899999 6999999999988 999999987
No 338
>PRK10345 hypothetical protein; Provisional
Probab=91.96 E-value=0.12 Score=43.40 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=42.4
Q ss_pred cccccC-CCeeeE-Eeecccc---ccHHHHHHHcCCCCcchhhcccchhHHHHH-HHHHHhhhhhhhhHHHhhhhh
Q psy13596 3 GQQEHN-GNSYRF-IIISKFG---SDLQKLLDEHKEFSLKNTLTITDFPILKVM-SMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 3 G~~~~~-~~~yrf-mVmerlG---~dL~~l~~~~~kf~~ktVl~la~~~ml~~l-~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|..+.+ |..|=| +|||..| .+|.+++.. ++|+.. + ... .++|..+ .+.|+. +.+||||||
T Consensus 68 g~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~-~-~~~-~~~L~~l~~yLh~~------~IvhrDlKp 133 (210)
T PRK10345 68 GTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED-V-AQL-RQLLKKLKRYLLDN------RIVTMELKP 133 (210)
T ss_pred EEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh-H-HHH-HHHHHHHHHHHHHC------CEeecCCCH
Confidence 444443 234545 7899666 899999964 366665 2 223 3788888 899999 999999998
No 339
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=91.84 E-value=0.1 Score=43.31 Aligned_cols=53 Identities=6% Similarity=0.025 Sum_probs=43.0
Q ss_pred CeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.+||||.+....-..+ +.++..++..++ .|++..|.+.|+. +.+|++|+|
T Consensus 71 ~~~~~lv~e~~~~~~l~~~---~~~~~~~~~~~~-~qi~~~l~~lH~~------~i~H~dlkp 123 (279)
T cd06619 71 ENRISICTEFMDGGSLDVY---RKIPEHVLGRIA-VAVVKGLTYLWSL------KILHRDVKP 123 (279)
T ss_pred CCEEEEEEecCCCCChHHh---hcCCHHHHHHHH-HHHHHHHHHHHHC------CEeeCCCCH
Confidence 3567899998865332333 378899999999 7999999999998 999999987
No 340
>KOG1989|consensus
Probab=91.73 E-value=0.12 Score=51.27 Aligned_cols=52 Identities=6% Similarity=0.179 Sum_probs=46.7
Q ss_pred eEEeecccc-ccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhh--HHHhhhh
Q psy13596 13 RFIIISKFG-SDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQ--AVTSVII 71 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~--~~~r~i~ 71 (186)
=+|.||.|. -.|=++++..- +|++..||+|. .++-..+..+|+. + ++|||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf-~dv~~AVa~mH~~------~pPiIHRDLK 173 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIF-YDVCEAVAAMHYL------KPPIIHRDLK 173 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHH-HHHHHHHHHHhcC------CCccchhhhh
Confidence 467899998 69999999543 89999999999 6999999999999 6 9999987
No 341
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=91.70 E-value=0.12 Score=43.73 Aligned_cols=70 Identities=13% Similarity=0.032 Sum_probs=48.9
Q ss_pred EEeecccc--ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHH-HHHHHHHHHHHHHH
Q psy13596 14 FIIISKFG--SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVR-RKEALSAANDLTQA 90 (186)
Q Consensus 14 fmVmerlG--~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~-rk~a~~s~~~l~~~ 90 (186)
+|||+++. .+|..++.. +.++...+ .++...|.+.|+. +.+|+|++|.-.. .. +.
T Consensus 122 ~lV~e~l~G~~~L~~~l~~-~~l~~~~~-----~~i~~~l~~lH~~------GI~HrDlkp~NILv~~----------~~ 179 (239)
T PRK01723 122 DILIERIEGARDLVALLQE-APLSEEQW-----QAIGQLIARFHDA------GVYHADLNAHNILLDP----------DG 179 (239)
T ss_pred eEEEEecCCCCCHHHHHhc-CCCCHHHH-----HHHHHHHHHHHHC------CCCCCCCCchhEEEcC----------CC
Confidence 59999775 689888752 35666543 3567789999999 9999999872110 00 11
Q ss_pred HHHHhhHhHHHHhhh
Q psy13596 91 LVDHLNVGVAQAYLN 105 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~N 105 (186)
-+..+|+|.+..+..
T Consensus 180 ~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 180 KFWLIDFDRGELRTP 194 (239)
T ss_pred CEEEEECCCcccCCC
Confidence 366789998888774
No 342
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=91.64 E-value=0.12 Score=42.69 Aligned_cols=53 Identities=19% Similarity=0.307 Sum_probs=44.9
Q ss_pred eEEeeccc-cccHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKF-GSDLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerl-G~dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
-+||||.+ +.+|.+.+... . .|+..+.+.++ +|+.+.|.+.|.. +.+|+++.+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~-~~i~~~l~~Lh~~------~iiH~~l~~ 131 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIA-IQIAEALSYLHSN------NIIHGNLSP 131 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHH-HHHHHHHHHHHHT------TEEEST-SG
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccc------ccccccccc
Confidence 78999997 46999999987 4 89999999999 7999999999998 899999764
No 343
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=91.50 E-value=0.11 Score=51.49 Aligned_cols=56 Identities=18% Similarity=0.282 Sum_probs=46.7
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.|||||.+ |.+|.+++. +++...++.++ .++.+.|.+.|+. =++..+||||+|
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~-~~ia~~L~yLH~~---~~~~iiH~dlkp 811 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIA-IGIAKALRFLHCR---CSPAVVVGNLSP 811 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHH-HHHHHHHHHhccC---CCCCeecCCCCH
Confidence 35679999988 789999986 58888899999 7999999999942 014899999997
No 344
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=91.18 E-value=0.12 Score=44.92 Aligned_cols=52 Identities=13% Similarity=0.034 Sum_probs=40.8
Q ss_pred CeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+-++|||.+ |.+|.. ...++...+..++ .||+..|.+.|+. +.+||||++
T Consensus 144 ~~~~~lv~e~~~~~~L~~----~~~~~~~~~~~i~-~qi~~aL~~LH~~------~ivHrDlkp 196 (353)
T PLN00034 144 NGEIQVLLEFMDGGSLEG----THIADEQFLADVA-RQILSGIAYLHRR------HIVHRDIKP 196 (353)
T ss_pred CCeEEEEEecCCCCcccc----cccCCHHHHHHHH-HHHHHHHHHHHHC------CEeecCCCH
Confidence 45678999987 345532 1156677888899 6999999999998 999999987
No 345
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=91.06 E-value=0.15 Score=48.63 Aligned_cols=57 Identities=18% Similarity=0.111 Sum_probs=43.6
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcC-CCC-------------------cchhhcccchhHHHHHHHHHHhhhhhhhhHHH
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHK-EFS-------------------LKNTLTITDFPILKVMSMEYCYQRNWQKQAVT 67 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~-kf~-------------------~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~ 67 (186)
.....+|||+..+ .+|.+++..++ .+. ...+..++ .|++..|.+.|+. +++|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~-~qll~aL~yLH~~------gIiH 278 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIM-RQILFALDGLHST------GIVH 278 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHH-HHHHHHHHHHHHC------CEEe
Confidence 4567899999987 56888876443 222 23455678 6999999999988 9999
Q ss_pred hhhhh
Q psy13596 68 SVIIG 72 (186)
Q Consensus 68 r~i~~ 72 (186)
|||||
T Consensus 279 RDLKP 283 (566)
T PLN03225 279 RDVKP 283 (566)
T ss_pred CcCCH
Confidence 99998
No 346
>KOG0664|consensus
Probab=90.60 E-value=0.06 Score=48.70 Aligned_cols=102 Identities=14% Similarity=0.267 Sum_probs=66.1
Q ss_pred EEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy13596 14 FIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVD 93 (186)
Q Consensus 14 fmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~ 93 (186)
|.|-|++-+||.||.-.-..+|.--|.-.- +|+|..|.+.|.. .++||||||--..-+ +|-+..
T Consensus 133 YV~TELmQSDLHKIIVSPQ~Ls~DHvKVFl-YQILRGLKYLHsA------~ILHRDIKPGNLLVN---------SNCvLK 196 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQALTPDHVKVFV-YQILRGLKYLHTA------NILHRDIKPGNLLVN---------SNCILK 196 (449)
T ss_pred HHHHHHHHhhhhheeccCCCCCcchhhhhH-HHHHhhhHHHhhc------chhhccCCCccEEec---------cCceEE
Confidence 456788999999998844478877776667 6999999999999 999999997221111 122333
Q ss_pred HhhHhHHHHhhhhhhhh---------HHHHHHHHHHHHHHhhHHHHH
Q psy13596 94 HLNVGVAQAYLNQKKLD---------AEAKQLHTNAITFSKQTQQWL 131 (186)
Q Consensus 94 ~Ln~gvs~~y~Nqk~ie---------~E~K~L~~~Ta~laKqt~qW~ 131 (186)
..|||++....-..+.. =.+-++.-|+.+|..-.+-|.
T Consensus 197 ICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWS 243 (449)
T KOG0664|consen 197 ICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWS 243 (449)
T ss_pred ecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceeh
Confidence 44555554322211111 013345667777777777775
No 347
>KOG0574|consensus
Probab=90.47 E-value=0.3 Score=44.87 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=43.8
Q ss_pred eeEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
-=++|||.|| -|+.+|....+ .+++.-+-.+- -..|+.|+|.|-- +.+|||||.
T Consensus 102 DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL-~~TLKGL~YLH~~------~KIHRDIKA 157 (502)
T KOG0574|consen 102 DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVL-RDTLKGLQYLHDL------KKIHRDIKA 157 (502)
T ss_pred ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHH-HHHHhHHHHHHHH------HHHHhhccc
Confidence 3589999999 79999999777 68865544444 2579999999999 889999984
No 348
>KOG0597|consensus
Probab=90.04 E-value=0.21 Score=48.88 Aligned_cols=57 Identities=7% Similarity=0.131 Sum_probs=52.0
Q ss_pred CeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL 73 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~ 73 (186)
...=|+|.|..--||..|+...+++|+-.|..|| ++..+.|.+.|.. .++|||+||+
T Consensus 73 ~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a-~~LVsaL~yLhs~------rilhrd~kPq 129 (808)
T KOG0597|consen 73 SAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIA-YDLVSALYYLHSN------RILHRDMKPQ 129 (808)
T ss_pred cceEEEEehhhhhhHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHhc------CcccccCCcc
Confidence 3556889998877999999988899999999999 7999999999999 9999999984
No 349
>KOG0610|consensus
Probab=89.94 E-value=0.3 Score=45.84 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=51.6
Q ss_pred cCCCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 7 HNGNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 7 ~~~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+-..+|-++|||.+ |-||..+..+.. .||...+-=-| ..+|-.|+|.|-- +++.||+||
T Consensus 146 fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYa-AEvl~ALEYLHml------GivYRDLKP 207 (459)
T KOG0610|consen 146 FETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYA-AEVLLALEYLHML------GIVYRDLKP 207 (459)
T ss_pred eeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHH-HHHHHHHHHHHhh------ceeeccCCc
Confidence 44668999999998 699999999764 69998886666 4799999999999 999999998
No 350
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=89.89 E-value=0.32 Score=37.89 Aligned_cols=56 Identities=13% Similarity=0.082 Sum_probs=49.3
Q ss_pred CeeeEEeeccccc-cHHHHHHHcCC-CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFGS-DLQKLLDEHKE-FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG~-dL~~l~~~~~k-f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.++||+.++. +|.+++..... ++...+..++ .+++..+.+.|+. +..|+++++
T Consensus 69 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~------~i~h~di~~ 126 (225)
T smart00221 69 PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYL-RQILEALEYLHSL------GIVHRDLKP 126 (225)
T ss_pred CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHhC------CeecCCCCH
Confidence 4678999999887 99999987665 9999999999 6999999999998 999999765
No 351
>KOG0666|consensus
Probab=89.63 E-value=0.081 Score=48.50 Aligned_cols=104 Identities=17% Similarity=0.234 Sum_probs=81.3
Q ss_pred eeeEEeeccccccHHHHHHHcC-----CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh-----hHHHHHHH
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHK-----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG-----LEVRRKEA 80 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~-----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~-----~e~~rk~a 80 (186)
.-=.|++|.---||+.|..... .+|..+|-.|- .|+|+.+-+.|+. =.+|||+|| ++.+..
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsil-wQil~Gv~YLH~N------WvlHRDLKPaNIlvmgdgpe-- 171 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSIL-WQILDGVHYLHSN------WVLHRDLKPANILVMGDGPE-- 171 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHH-HHHHhhhHHHhhh------heeeccCCcceEEEeccCCc--
Confidence 4457999999999999998653 38899999999 7999999999998 689999998 332111
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHhhhhhh-h---h-------HHHHHHHHHHHHHHhhHHHHH
Q psy13596 81 LSAANDLTQALVDHLNVGVAQAYLNQKK-L---D-------AEAKQLHTNAITFSKQTQQWL 131 (186)
Q Consensus 81 ~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~-i---e-------~E~K~L~~~Ta~laKqt~qW~ 131 (186)
...|..-|.|++.+|.|+-. + + =.+-+|.-|+..|.+-.+-|+
T Consensus 172 --------rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWA 225 (438)
T KOG0666|consen 172 --------RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWA 225 (438)
T ss_pred --------cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHH
Confidence 23466778999999999732 2 1 236678888888988888886
No 352
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=89.15 E-value=0.2 Score=39.73 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=38.7
Q ss_pred eeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+||||.+ |.+|.+++...+. .++ .++...|.+.|+. +.+|+|++|
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~~-------~~~-~~i~~~l~~lH~~------gi~H~Dl~~ 118 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGND-------ELL-REIGRLVGKLHKA------GIVHGDLTT 118 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcHH-------HHH-HHHHHHHHHHHHC------CeecCCCCc
Confidence 4568999998 8999998763212 567 5899999999998 999999876
No 353
>KOG0599|consensus
Probab=89.01 E-value=0.23 Score=44.97 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=46.9
Q ss_pred CCCeeeEEeeccccc-cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFGS-DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG~-dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
-..+|-|+|+|++-. .|.+.+...=.+|+|-.-.|. -|+|..++++|.. .++|||+||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iM-rqlfegVeylHa~------~IVHRDLKp 151 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIM-RQLFEGVEYLHAR------NIVHRDLKP 151 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHH-HHHHHHHHHHHHh------hhhhcccCh
Confidence 456899999999863 455544422279999999999 5999999999999 999999987
No 354
>KOG0612|consensus
Probab=88.70 E-value=0.31 Score=50.65 Aligned_cols=59 Identities=15% Similarity=0.240 Sum_probs=49.6
Q ss_pred ccCCCeeeEEeeccc-cccHHHHHHHcCCCCcc-hhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 6 EHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLK-NTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 6 ~~~~~~yrfmVmerl-G~dL~~l~~~~~kf~~k-tVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-...|=|||||.+ |-||=.|..+-+++|.+ +-+.+| .|.-.|-.+|+- ++|||||||
T Consensus 143 AFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~a--EiVlAldslH~m------gyVHRDiKP 203 (1317)
T KOG0612|consen 143 AFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTA--EIVLALDSLHSM------GYVHRDIKP 203 (1317)
T ss_pred HhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHH--HHHHHHHHHHhc------cceeccCCc
Confidence 455678999999986 89999999966678866 446666 599999999999 999999998
No 355
>KOG0032|consensus
Probab=86.35 E-value=0.37 Score=44.05 Aligned_cols=89 Identities=12% Similarity=0.159 Sum_probs=62.4
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDL 87 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l 87 (186)
...+-++|||++- .+|.+-..+. .||+..+..+. .|+++.+.+.|.. +.+|||+||--..- ....-
T Consensus 107 ~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~-~~il~av~~lH~~------gvvHrDlKpEN~L~-----~~~~~ 173 (382)
T KOG0032|consen 107 DPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGII-RQILEAVKYLHSL------GVVHRDLKPENLLL-----ASKDE 173 (382)
T ss_pred cCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHH-HHHHHHHHHHHhC------CceeccCCHHHeee-----ccccC
Confidence 3458899999985 5554443322 29999999999 6999999999999 99999999832111 11111
Q ss_pred HHHHHHHhhHhHHHHhhhhhhhh
Q psy13596 88 TQALVDHLNVGVAQAYLNQKKLD 110 (186)
Q Consensus 88 ~~~Lv~~Ln~gvs~~y~Nqk~ie 110 (186)
.+.-+...|||++..+..+..+.
T Consensus 174 ~~~~ik~~DFGla~~~~~~~~~~ 196 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKPGERLH 196 (382)
T ss_pred CCCcEEEeeCCCceEccCCceEe
Confidence 12457788999998877744443
No 356
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=86.30 E-value=0.53 Score=44.18 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=48.5
Q ss_pred eeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHH
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQ 89 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~ 89 (186)
.+.++|||.+ |.+|.+++. ....++ .++...|.+.|+. +.+|+|++|.-..=. +
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~-~~i~~~L~~lH~~------giiHrDlkp~NILl~----------~ 463 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELV-RKVGEIVAKLHKA------GIVHGDLTTSNFIVR----------D 463 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHH-HHHHHHHHHHHhC------CCccCCCChHHEEEE----------C
Confidence 4578999999 899998876 235567 5899999999999 999999987211000 1
Q ss_pred HHHHHhhHhHHHH
Q psy13596 90 ALVDHLNVGVAQA 102 (186)
Q Consensus 90 ~Lv~~Ln~gvs~~ 102 (186)
.-+..+|+|.+..
T Consensus 464 ~~~~liDFGla~~ 476 (535)
T PRK09605 464 DRLYLIDFGLGKY 476 (535)
T ss_pred CcEEEEeCccccc
Confidence 2345678888765
No 357
>PRK09188 serine/threonine protein kinase; Provisional
Probab=85.83 E-value=0.44 Score=43.40 Aligned_cols=72 Identities=4% Similarity=-0.130 Sum_probs=47.1
Q ss_pred eeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhh-hhhHHHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVI-IGLEVRRKEALSAANDLTQ 89 (186)
Q Consensus 12 yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i-~~~e~~rk~a~~s~~~l~~ 89 (186)
..|||||.+ |.+|.. .. .... ..+. .++++.|.+.|+. +.+|||| ||.-..-. .+
T Consensus 92 ~~~LVmE~~~G~~L~~-~~---~~~~---~~~~-~~i~~aL~~lH~~------gIiHrDL~KP~NILv~---------~~ 148 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-AR---PHGD---PAWF-RSAHRALRDLHRA------GITHNDLAKPQNWLMG---------PD 148 (365)
T ss_pred CcEEEEEccCCCCHHH-hC---ccch---HHHH-HHHHHHHHHHHHC------CCeeCCCCCcceEEEc---------CC
Confidence 469999998 788862 22 1111 2345 4899999999999 9999999 87211000 01
Q ss_pred HHHHHhhHhHHHHhhhh
Q psy13596 90 ALVDHLNVGVAQAYLNQ 106 (186)
Q Consensus 90 ~Lv~~Ln~gvs~~y~Nq 106 (186)
.-+..+|||++..+...
T Consensus 149 ~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 149 GEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCEEEEECccceecccC
Confidence 12567899988876543
No 358
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=85.78 E-value=0.64 Score=37.93 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=40.2
Q ss_pred EEeeccc-cccHHHHHHH-----cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 14 FIIISKF-GSDLQKLLDE-----HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 14 fmVmerl-G~dL~~l~~~-----~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+++++.+ |.+|..++.. +. .++..+++.++ .|++..|.+.|.. +.+|++|+|
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lH~~------~i~H~dikp 141 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM-IDIASGMEYLSSK------NFIHRDLAA 141 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------CEeecccch
Confidence 4566544 5678766532 11 47888999999 7999999999988 999999987
No 359
>KOG0194|consensus
Probab=84.86 E-value=0.84 Score=43.27 Aligned_cols=50 Identities=12% Similarity=0.250 Sum_probs=44.2
Q ss_pred EEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhh
Q psy13596 14 FIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVI 70 (186)
Q Consensus 14 fmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i 70 (186)
++|||++ |-+|++.+.+++ .+|...-+..+ ++....|.|+|++ +.+||||
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~-~~AA~Gl~YLh~k------~~IHRDI 288 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC-YDAARGLEYLHSK------NCIHRDI 288 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH-HHHHhHHHHHHHC------CCcchhH
Confidence 5889986 459999999888 68888888888 6899999999999 9999996
No 360
>KOG0033|consensus
Probab=84.80 E-value=0.45 Score=42.56 Aligned_cols=58 Identities=12% Similarity=0.200 Sum_probs=45.1
Q ss_pred cCCCeeeEEeeccc-cccHH-HHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 7 HNGNSYRFIIISKF-GSDLQ-KLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 7 ~~~~~yrfmVmerl-G~dL~-~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
++...|++||+|.. |.||. +|..+ --||+.-+--.. -|+|..+-+=|.. +++|||++|
T Consensus 79 i~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~-rQiLeal~yCH~n------~IvHRDvkP 138 (355)
T KOG0033|consen 79 IQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCI-QQILEALAYCHSN------GIVHRDLKP 138 (355)
T ss_pred hcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHhc------CceeccCCh
Confidence 36778999999987 56653 23321 157777777777 5999999999999 999999987
No 361
>KOG1027|consensus
Probab=84.47 E-value=0.64 Score=46.88 Aligned_cols=58 Identities=10% Similarity=0.205 Sum_probs=44.0
Q ss_pred CCeeeEEeeccccccHHHHHHHcC-CCCcchh---hcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK-EFSLKNT---LTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL 73 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~-kf~~ktV---l~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~ 73 (186)
...|+|+.+|+|-++|+++.+..+ .+....+ ..+- .|+.+.+.-.|.- +++|||+||+
T Consensus 574 d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l-~q~~~GlaHLHsl------~iVHRDLkPQ 635 (903)
T KOG1027|consen 574 DRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVL-SQIASGLAHLHSL------KIVHRDLKPQ 635 (903)
T ss_pred CCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHH-HHHHHHHHHHHhc------ccccccCCCc
Confidence 457999999999999999999754 4444431 1122 2677788888988 9999999983
No 362
>KOG0593|consensus
Probab=84.43 E-value=0.69 Score=42.33 Aligned_cols=74 Identities=9% Similarity=0.103 Sum_probs=58.2
Q ss_pred EEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhH-HHHHHHHHHHHHHHHHH
Q psy13596 14 FIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLE-VRRKEALSAANDLTQAL 91 (186)
Q Consensus 14 fmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e-~~rk~a~~s~~~l~~~L 91 (186)
.||+|.+---+-.-+++.. ..+...|-++- +|+|..+-+-|.. ..+||||||-- .-.+ +.+
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l-~Q~l~ai~~cHk~------n~IHRDIKPENILit~----------~gv 139 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYL-YQLLKAIHFCHKN------NCIHRDIKPENILITQ----------NGV 139 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHH-HHHHHHhhhhhhc------CeecccCChhheEEec----------CCc
Confidence 6899988877666667655 89999999999 7999999999999 99999999821 1112 556
Q ss_pred HHHhhHhHHHHhh
Q psy13596 92 VDHLNVGVAQAYL 104 (186)
Q Consensus 92 v~~Ln~gvs~~y~ 104 (186)
+...|||.|....
T Consensus 140 vKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 140 VKLCDFGFARTLS 152 (396)
T ss_pred EEeccchhhHhhc
Confidence 7778888886544
No 363
>KOG0578|consensus
Probab=84.43 E-value=0.52 Score=45.38 Aligned_cols=51 Identities=12% Similarity=0.194 Sum_probs=42.1
Q ss_pred eEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 13 RFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 13 rfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
=+.|||.+ |-+|.++...+ .|++-.+--|+ ..+|..|.+.|.. +.+|||||
T Consensus 345 LWVVMEym~ggsLTDvVt~~-~~~E~qIA~Ic-re~l~aL~fLH~~------gIiHrDIK 396 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTKT-RMTEGQIAAIC-REILQGLKFLHAR------GIIHRDIK 396 (550)
T ss_pred eEEEEeecCCCchhhhhhcc-cccHHHHHHHH-HHHHHHHHHHHhc------ceeeeccc
Confidence 35788877 56799998844 67777777777 5799999999999 99999998
No 364
>KOG1167|consensus
Probab=82.45 E-value=0.65 Score=43.31 Aligned_cols=83 Identities=19% Similarity=0.162 Sum_probs=53.9
Q ss_pred CCCeeeEEeeccccccH-HHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHH--HHHHHHHHH
Q psy13596 8 NGNSYRFIIISKFGSDL-QKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEV--RRKEALSAA 84 (186)
Q Consensus 8 ~~~~yrfmVmerlG~dL-~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~--~rk~a~~s~ 84 (186)
++++-.-+||+-++-+= -+|+. .++..-+..-. ..||..|...|.. +++||||||.-- -++
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl-~~ll~Al~~~h~~------GIvHRDiKpsNFL~n~~------ 168 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYL-RNLLKALAHLHKN------GIVHRDIKPSNFLYNRR------ 168 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHH-HHHHHHhhhhhcc------CccccCCCccccccccc------
Confidence 45677899999999554 44444 34433333333 3489999999999 999999998211 000
Q ss_pred HHHHHHHHHHhhHhHHHHhhhhhhhh
Q psy13596 85 NDLTQALVDHLNVGVAQAYLNQKKLD 110 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y~Nqk~ie 110 (186)
..--..+|||+++.|...+.-+
T Consensus 169 ----t~rg~LvDFgLA~~~d~~~~~~ 190 (418)
T KOG1167|consen 169 ----TQRGVLVDFGLAQRYDGYQQTE 190 (418)
T ss_pred ----cCCceEEechhHHHHHhhhhhh
Confidence 1124568999998866655433
No 365
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8. This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.
Probab=82.20 E-value=8.4 Score=37.66 Aligned_cols=66 Identities=20% Similarity=0.320 Sum_probs=55.1
Q ss_pred hhHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q psy13596 109 LDAEAKQL-HTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALETAYEGSIN 174 (186)
Q Consensus 109 ie~E~K~L-~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~~v~~~~~~ 174 (186)
|.+|...| ..+...+-.--.+|..+...++.++.|+-+++.|-...+..+..+.+.|++++..++.
T Consensus 10 L~~eL~~le~~ni~~l~~s~~~v~~l~~~ld~a~~e~d~le~~l~~y~~~L~~~~~di~~IE~qn~~ 76 (701)
T PF09763_consen 10 LSKELSALEAANIHSLLESEKQVNSLMEYLDEALAECDELESWLSLYDVELNSVRDDIEYIESQNNG 76 (701)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 34444444 3445667778888999999999999999999999999999999999999999987654
No 366
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=81.88 E-value=1.2 Score=42.33 Aligned_cols=55 Identities=11% Similarity=0.013 Sum_probs=42.0
Q ss_pred eeeEEeecccc-ccHHHHHHHcC------------------------CCCcchhhcccchhHHHHHHHHHHhhhhhhhhH
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEHK------------------------EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQA 65 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~~------------------------kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~ 65 (186)
...+||||..+ .+|.+++.... +++..++..++ .|++..|.+.|+. +.
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~-~ql~~aL~~lH~~------~i 330 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVM-RQVLTGLRKLHRI------GI 330 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHH-HHHHHHHHHHHHC------Ce
Confidence 35789999876 57777665321 23445677788 6999999999998 89
Q ss_pred HHhhhhh
Q psy13596 66 VTSVIIG 72 (186)
Q Consensus 66 ~~r~i~~ 72 (186)
+||||||
T Consensus 331 vHrDLKp 337 (507)
T PLN03224 331 VHRDIKP 337 (507)
T ss_pred ecCCCch
Confidence 9999987
No 367
>KOG0577|consensus
Probab=80.91 E-value=0.75 Score=45.51 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=49.9
Q ss_pred cccCCCeee----EEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 5 QEHNGNSYR----FIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 5 ~~~~~~~yr----fmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+|+|+..| +||||.|=-|-.+|++-.. .+-.--+.-|+ -..|+.|.|.|+. .-||||||.
T Consensus 89 ieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~-~gaL~gLaYLHS~------~~IHRDiKA 154 (948)
T KOG0577|consen 89 IEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT-HGALQGLAYLHSH------NRIHRDIKA 154 (948)
T ss_pred ccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHH-HHHHHHHHHHHHh------hHHhhhccc
Confidence 467777765 7999999999999998665 46666666666 5799999999999 999999983
No 368
>KOG0665|consensus
Probab=80.48 E-value=0.42 Score=43.65 Aligned_cols=50 Identities=8% Similarity=0.131 Sum_probs=43.4
Q ss_pred EEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 14 FIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 14 fmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
++|||..--+|..+.. -.+..+|+-.|- +||+..+..+|+. +++|||+||
T Consensus 97 y~v~e~m~~nl~~vi~--~elDH~tis~i~-yq~~~~ik~lhs~------~IihRdLkP 146 (369)
T KOG0665|consen 97 YLVMELMDANLCQVIL--MELDHETISYIL-YQMLCGIKHLHSA------GIIHRDLKP 146 (369)
T ss_pred HHHHHhhhhHHHHHHH--HhcchHHHHHHH-HHHHHHHHHHHhc------ceeecccCc
Confidence 5788888888877655 367788999999 7999999999999 999999997
No 369
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=79.74 E-value=1.9 Score=33.75 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=54.1
Q ss_pred eEEeecccc-ccHHHHHHHcC---CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFG-SDLQKLLDEHK---EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLT 88 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~~---kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~ 88 (186)
-++||+.+. .++..++.... .++...+..+. .++++.+.+.|.. +.+|||++|.-..-. .
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~H~~------~~~hrd~kp~nil~~-----~---- 136 (384)
T COG0515 73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFIL-AQILSALEYLHSK------GIIHRDIKPENILLD-----R---- 136 (384)
T ss_pred EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHH-HHHHHHHHHHHhC------CeeccCCCHHHeeec-----C----
Confidence 477888776 77776777554 58888899999 6999999999999 899999986221111 0
Q ss_pred HH-HHHHhhHhHHHHhh
Q psy13596 89 QA-LVDHLNVGVAQAYL 104 (186)
Q Consensus 89 ~~-Lv~~Ln~gvs~~y~ 104 (186)
.. .+..+++|.+..+.
T Consensus 137 ~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 137 DGRVVKLIDFGLAKLLP 153 (384)
T ss_pred CCCeEEEeccCcceecC
Confidence 11 35567788776444
No 370
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function.
Probab=79.15 E-value=50 Score=32.32 Aligned_cols=100 Identities=19% Similarity=0.214 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHh
Q psy13596 46 PILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSK 125 (186)
Q Consensus 46 ~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laK 125 (186)
++|.-+-.++.+ +.-|.|-+. -.+..-.-.+++++.|...-..--..+|.|+|+-+. .|..-..-+.+..
T Consensus 492 RIlEIv~NI~KQ-----k~eI~KIl~----DTr~lQkeiN~l~gkL~RtF~v~dElifrdAKkDe~-~rkaYK~La~lh~ 561 (594)
T PF05667_consen 492 RILEIVKNIRKQ-----KEEIEKILS----DTRELQKEINSLTGKLDRTFTVTDELIFRDAKKDEA-ARKAYKLLASLHE 561 (594)
T ss_pred HHHHHHHhHHHH-----HHHHHHHHH----HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHH
Confidence 677777777777 555555532 223344456778888888887777889999996664 6666788888999
Q ss_pred hHHHHHHHHHHHHHHhhhhccHHHHHHHHH
Q psy13596 126 QTQQWLSLVDNFNSALKEIGDVENWAKVIE 155 (186)
Q Consensus 126 qt~qW~~l~~~~~~~LKEiGDveNWa~~iE 155 (186)
...+....++..-...+||-|+|+|.++..
T Consensus 562 ~c~~Li~~v~~tG~~~rEirdLe~qI~~e~ 591 (594)
T PF05667_consen 562 NCSQLIETVEETGTISREIRDLEEQIDTES 591 (594)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987643
No 371
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=78.82 E-value=1 Score=36.09 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=37.2
Q ss_pred eeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+-+||||.+ |.+|.++.. ......++ .++++.+.+.|+. +.+|+||+|
T Consensus 104 ~~~~lv~e~~~g~~L~~~~~------~~~~~~~~-~~i~~~l~~lh~~------gi~H~Dl~p 153 (198)
T cd05144 104 NRHAVVMEYIDGVELYRVRV------LEDPEEVL-DEILEEIVKAYKH------GIIHGDLSE 153 (198)
T ss_pred CCceEEEEEeCCcchhhccc------cccHHHHH-HHHHHHHHHHHHC------CCCcCCCCc
Confidence 3458999976 567766532 13455677 5899999999998 999999987
No 372
>KOG0193|consensus
Probab=78.60 E-value=0.88 Score=44.58 Aligned_cols=51 Identities=22% Similarity=0.316 Sum_probs=43.2
Q ss_pred Eeeccc--cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 15 IIISKF--GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 15 mVmerl--G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+||..+ |.+|-+..---. ||..-+..+|| -|+-..|-|.|.+ .+||||+|.
T Consensus 463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIA-qQiaqGM~YLHAK------~IIHrDLKS 516 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIA-QQIAQGMDYLHAK------NIIHRDLKS 516 (678)
T ss_pred eeeehhccCchhhhhccchhhhhhHHHHHHHH-HHHHHhhhhhhhh------hhhhhhccc
Confidence 444443 688888887677 99999999999 6999999999999 999999873
No 373
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=78.06 E-value=2 Score=32.90 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=30.9
Q ss_pred cHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHh
Q psy13596 23 DLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCY 57 (186)
Q Consensus 23 dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~ 57 (186)
+|.+++...+ .|+...+..++ .|+++.|.+.|+.
T Consensus 2 sL~~~l~~~~~~l~~~~~~~i~-~qi~~~L~~lH~~ 36 (176)
T smart00750 2 SLADILEVRGRPLNEEEIWAVC-LQCLRALRELHRQ 36 (176)
T ss_pred cHHHHHHHhCCCCCHHHHHHHH-HHHHHHHHHHHhc
Confidence 6888888767 79999999999 7999999999997
No 374
>KOG0580|consensus
Probab=77.24 E-value=1.9 Score=38.18 Aligned_cols=53 Identities=17% Similarity=0.136 Sum_probs=43.1
Q ss_pred eEEeecccc-ccHHHHHHH--cCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKFG-SDLQKLLDE--HKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~--~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
=|+++|+-+ .+|-+.+.. +.+|+.+.--... .|+-..+.+-|.+ ..+||||||
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi-~q~A~Al~y~h~k------~VIhRdiKp 152 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI-KQLANALLYCHLK------RVIHRDIKP 152 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHH-HHHHHHHHHhccC------CcccCCCCH
Confidence 478888876 566666663 3389988887777 5899999999999 999999997
No 375
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=76.31 E-value=0.87 Score=41.22 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=43.9
Q ss_pred eeEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|-+..+..++.+..+.+..+. .|+...++.++ .+|+..|.+.|.. +.+|++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~------~ivHrdlkp 267 (401)
T cd05107 213 YDQYLPSAPERTRRDTLINESPALSYMDLVGFS-YQVANGMEFLASK------NCVHRDLAA 267 (401)
T ss_pred hhhhhcccCCCcchhhhhcCCCCCCHHHHHHHH-HHHHHHHHHHhcC------CcCcccCCc
Confidence 445566666766666666555 79999999999 7999999999988 899999987
No 376
>KOG0604|consensus
Probab=76.25 E-value=3 Score=38.27 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=51.5
Q ss_pred cCCCeeeEEeeccc-cccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 7 HNGNSYRFIIISKF-GSDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 7 ~~~~~yrfmVmerl-G~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|+|.+.=.||||-+ |-+|..=+...| -|+++-+-+|. -|+=..+.+.|.. .+-|||+||
T Consensus 128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~-~qI~~Av~~lH~~------nIAHRDlKp 189 (400)
T KOG0604|consen 128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIM-KQIGLAVRYLHSM------NIAHRDLKP 189 (400)
T ss_pred ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHH-HHHHHHHHHHHhc------chhhccCCh
Confidence 45667778999987 788888888877 49999999999 5999999999999 999999997
No 377
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=74.19 E-value=2 Score=33.53 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=48.2
Q ss_pred eeeEEeeccccc------cHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHH
Q psy13596 11 SYRFIIISKFGS------DLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAA 84 (186)
Q Consensus 11 ~yrfmVmerlG~------dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~ 84 (186)
...+||||.++. .|..+.. . .....++ .+++..+...|.. .+.+|+|++|--.. +
T Consensus 88 ~~~~lv~e~~~g~~~~~~~l~~~~~---~---~~~~~~~-~~~~~~l~~lh~~-----~~ivH~Dl~p~Nil----i--- 148 (187)
T cd05119 88 NRHVLVMEFIGGDGIPAPRLKDVRL---L---EDPEELY-DQILELMRKLYRE-----AGLVHGDLSEYNIL----V--- 148 (187)
T ss_pred CCCEEEEEEeCCCCccChhhhhhhh---c---ccHHHHH-HHHHHHHHHHhhc-----cCcCcCCCChhhEE----E---
Confidence 356899999986 2332211 1 4556677 5899999999993 39999998872110 0
Q ss_pred HHHHHHHHHHhhHhHHHHhhhhhhh
Q psy13596 85 NDLTQALVDHLNVGVAQAYLNQKKL 109 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y~Nqk~i 109 (186)
++..+..+|+|.+..+..+.+.
T Consensus 149 ---~~~~~~liDfg~a~~~~~~~~~ 170 (187)
T cd05119 149 ---DDGKVYIIDVPQAVEIDHPNAE 170 (187)
T ss_pred ---ECCcEEEEECcccccccCcchH
Confidence 0122446778877655554333
No 378
>KOG0582|consensus
Probab=73.81 E-value=1.9 Score=40.99 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=41.0
Q ss_pred eEEeeccc--cccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKF--GSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerl--G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
=+.||+.+ |.-|+=|+..-. -|++.++..|- -..|+.|.|.|+. +.||||||+
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iL-re~LkaL~YLH~~------G~IHRdvKA 154 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATIL-REVLKALDYLHQN------GHIHRDVKA 154 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHH-HHHHHHHHHHHhc------Cceeccccc
Confidence 35677765 444444444445 79999999888 5899999999999 999999985
No 379
>KOG1006|consensus
Probab=73.71 E-value=2.1 Score=38.75 Aligned_cols=54 Identities=13% Similarity=0.080 Sum_probs=42.5
Q ss_pred eEEeeccccccHHHHHHH----cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKFGSDLQKLLDE----HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerlG~dL~~l~~~----~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
=.|-||++..||.++|.. .. +.|+.-+=.|+ +...+.|.+.-.. .+++||||||
T Consensus 138 cWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~It-vatV~AL~yLK~~-----lkiIHRDvKP 196 (361)
T KOG1006|consen 138 CWICMELMDISLDKLYKRVYSVQKSRIPENILGHIT-VATVDALDYLKEE-----LKIIHRDVKP 196 (361)
T ss_pred eeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhhee-eeehhHHHHHHHH-----hhhhhccCCh
Confidence 368999999999999984 23 68877776666 5667777777666 6789999998
No 380
>KOG4257|consensus
Probab=73.27 E-value=3.6 Score=41.11 Aligned_cols=104 Identities=15% Similarity=0.250 Sum_probs=70.0
Q ss_pred eEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 13 RFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
=.+|||+.- -.|-..++.+. .++..|.+.-+ +|+-..|.|.|++ .++||||- +|+ ++.|. .-
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~-~Qi~talaYLeSk------rfVHRDIA----aRN-iLVsS----p~ 528 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYC-YQICTALAYLESK------RFVHRDIA----ARN-ILVSS----PQ 528 (974)
T ss_pred eeEEEecccchhHHHHHHhccccchHHHHHHHH-HHHHHHHHHHHhh------chhhhhhh----hhh-eeecC----cc
Confidence 468999875 46777788777 89999999999 7999999999999 99999951 333 33332 33
Q ss_pred HHHHhhHhHHHHhhhhhhhh-----HHHHHH---HHHHHHHHhhHHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLD-----AEAKQL---HTNAITFSKQTQQWLS 132 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie-----~E~K~L---~~~Ta~laKqt~qW~~ 132 (186)
-|..-|||+|..-.++.--. -..|=+ ..+-.+|..-++-|.-
T Consensus 529 CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMF 578 (974)
T KOG4257|consen 529 CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMF 578 (974)
T ss_pred eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHH
Confidence 35567899997555443222 111111 2233456667777864
No 381
>KOG4250|consensus
Probab=73.02 E-value=2.9 Score=41.58 Aligned_cols=79 Identities=10% Similarity=0.158 Sum_probs=59.5
Q ss_pred CeeeEEeeccc-cccHHHHHHH--cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh------hHH-HHH
Q psy13596 10 NSYRFIIISKF-GSDLQKLLDE--HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG------LEV-RRK 78 (186)
Q Consensus 10 ~~yrfmVmerl-G~dL~~l~~~--~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~------~e~-~rk 78 (186)
.+--.+|||.+ |.||.++++. |- .+|..-++.|= -.+-+.|-..|+. +++|||||| .+. ++
T Consensus 89 ~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL-~d~~~al~~LrEn------~IvHRDlKP~NIvl~~Gedgq- 160 (732)
T KOG4250|consen 89 TRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLL-SDLVSALRHLREN------GIVHRDLKPGNIVLQIGEDGQ- 160 (732)
T ss_pred cccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHH-HHHHHHHHHHHHc------CceeccCCCCcEEEeecCCCc-
Confidence 45678999998 6999999995 33 69998888877 4688899999988 999999998 222 33
Q ss_pred HHHHHHHHHHHHHHHHhhHhHHHHhhhhh
Q psy13596 79 EALSAANDLTQALVDHLNVGVAQAYLNQK 107 (186)
Q Consensus 79 ~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk 107 (186)
.+--..|+|.|+.-....
T Consensus 161 -----------~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 161 -----------SIYKLTDFGAARELDDNS 178 (732)
T ss_pred -----------eEEeeecccccccCCCCC
Confidence 245556888886544443
No 382
>KOG0983|consensus
Probab=71.92 E-value=0.9 Score=41.23 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=47.9
Q ss_pred eEEeeccccccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKFGSDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerlG~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
=|+-||.++.=+++|+..-. .||+.-.=.+. +.+++.|-|.-.+ .+.+|||+||
T Consensus 166 V~IcMelMs~C~ekLlkrik~piPE~ilGk~t-va~v~AL~YLKeK-----H~viHRDvKP 220 (391)
T KOG0983|consen 166 VFICMELMSTCAEKLLKRIKGPIPERILGKMT-VAIVKALYYLKEK-----HGVIHRDVKP 220 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHhhhhhH-HHHHHHHHHHHHh-----cceeecccCc
Confidence 35679999999999999877 79988877777 6899999999999 8999999998
No 383
>KOG4236|consensus
Probab=71.73 E-value=2.4 Score=41.63 Aligned_cols=55 Identities=16% Similarity=0.190 Sum_probs=43.1
Q ss_pred eeeEEeecccccc-HHHHHHHc-CCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSD-LQKLLDEH-KEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~d-L~~l~~~~-~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+-=|.|||.|--| |+-|+..- |++|..+..-+- .|+|-.|.+.|.+ .++|=|+||
T Consensus 636 ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlv-tQIL~ALr~LH~k------nIvHCDLKP 692 (888)
T KOG4236|consen 636 ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLV-TQILVALRYLHFK------NIVHCDLKP 692 (888)
T ss_pred ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHH-HHHHHHHHHhhhc------ceeeccCCc
Confidence 4469999999766 45555543 389977665555 3999999999999 999999987
No 384
>KOG4158|consensus
Probab=70.83 E-value=3.3 Score=39.48 Aligned_cols=54 Identities=6% Similarity=0.106 Sum_probs=42.8
Q ss_pred CeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 10 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 10 ~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
..-=|+||-|+-..|..++.-+..=+..-.+.|+ |||...-..|++ +.-|||+|
T Consensus 315 ~~tlylvMkrY~~tLr~yl~~~~~s~r~~~~~la--QlLEav~hL~~h------gvAhRDlK 368 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQTLREYLWTRHRSYRTGRVILA--QLLEAVTHLHKH------GVAHRDLK 368 (598)
T ss_pred CceEEEehhcchhhHHHHHhcCCCchHHHHHHHH--HHHHHHHHHHHc------cchhhccc
Confidence 3456999999999999988743333344455566 999999999999 99999987
No 385
>PF10454 DUF2458: Protein of unknown function (DUF2458); InterPro: IPR018858 This entry represents a family of uncharacterised proteins.
Probab=70.07 E-value=37 Score=27.35 Aligned_cols=53 Identities=13% Similarity=0.183 Sum_probs=32.7
Q ss_pred HHHHHHhhHhHHHHhhhhhhhh-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhc
Q psy13596 89 QALVDHLNVGVAQAYLNQKKLD-AEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIG 145 (186)
Q Consensus 89 ~~Lv~~Ln~gvs~~y~Nqk~ie-~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiG 145 (186)
..+...++.+++..... .+.+ ...++| ..- -.+.-..|..++...+..|+++|
T Consensus 65 ~~~l~s~g~~i~~~~~~-~~~~~e~~~EL-~~f--D~kV~~a~~~m~~~~~~~L~~Lg 118 (150)
T PF10454_consen 65 DEVLRSVGGGISDQSEV-TTPEKEDEAEL-DKF--DEKVYKASKQMSKEQQAELKELG 118 (150)
T ss_pred HHHHHhccccccccccc-ccccHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHhcC
Confidence 34455566666654222 2333 223332 222 26788899999999999999998
No 386
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX1 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=69.95 E-value=32 Score=29.72 Aligned_cols=76 Identities=21% Similarity=0.194 Sum_probs=54.0
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHH--HHHHHhhhhccHH-----HHHHHHHHHHHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVD--NFNSALKEIGDVE-----NWAKVIEEDMRLISA 163 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~--~~~~~LKEiGDve-----NWa~~iE~D~~~i~~ 163 (186)
-++.|...+.++|.---.+.++-++|..++..|++-..-+...=+ .+.++|-.+|||+ .+.+.=+.|+..+.+
T Consensus 30 ~ie~LE~qLk~L~k~~~~lv~~r~eLa~~~~eFa~s~~~L~~~E~~~~Ls~als~laev~~~i~~~~~~qa~qd~~~f~e 109 (234)
T cd07665 30 EVECEEQRLRKLHAVVETLVNHRKELALNTALFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAE 109 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 466677777777777777777788888888888877666655543 3677777777775 466666778887777
Q ss_pred HHH
Q psy13596 164 ALE 166 (186)
Q Consensus 164 tl~ 166 (186)
+|+
T Consensus 110 ~l~ 112 (234)
T cd07665 110 LLA 112 (234)
T ss_pred hHH
Confidence 764
No 387
>KOG1187|consensus
Probab=68.07 E-value=3.1 Score=37.59 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=46.2
Q ss_pred eeEEeeccccc-cHHHHHHHc-C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKFGS-DLQKLLDEH-K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerlG~-dL~~l~~~~-~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.++||.|.+.. +|++.+-.. + .++-.+=+.|| +.+=..|.+.|.. ....++|||||+
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa-~g~A~gL~yLH~~---~~~~iiHrDiKs 205 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIA-LGAARGLAYLHEG---CPPPIIHRDIKS 205 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHH-HHHHHHHHHHccC---CCCCEecCCCCH
Confidence 59999999986 997766533 3 57788888999 7999999999998 223599999996
No 388
>KOG0197|consensus
Probab=66.94 E-value=5.4 Score=37.90 Aligned_cols=73 Identities=16% Similarity=0.199 Sum_probs=55.0
Q ss_pred EEeecccc-ccHHHHHHH-cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy13596 14 FIIISKFG-SDLQKLLDE-HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQA 90 (186)
Q Consensus 14 fmVmerlG-~dL~~l~~~-~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~ 90 (186)
+||||.+- -+|.+.+.. .+ ++.....+..| .|+=+.|.|..++ ++||||+ .+|+ +|..- +.
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a-~qIaeGM~YLes~------~~IHRDL----AARN-iLV~~----~~ 340 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFA-AQIAEGMAYLESK------NYIHRDL----AARN-ILVDE----DL 340 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHH-HHHHHHHHHHHhC------Cccchhh----hhhh-eeecc----Cc
Confidence 79999887 468887776 55 89999999999 7999999999999 9999993 1332 11111 33
Q ss_pred HHHHhhHhHHHH
Q psy13596 91 LVDHLNVGVAQA 102 (186)
Q Consensus 91 Lv~~Ln~gvs~~ 102 (186)
++-.-|||+++.
T Consensus 341 ~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 341 VVKISDFGLARL 352 (468)
T ss_pred eEEEcccccccc
Confidence 445568999983
No 389
>KOG0611|consensus
Probab=64.90 E-value=3 Score=39.80 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=65.2
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh-HHHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL-EVRRKEALSAAND 86 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~-e~~rk~a~~s~~~ 86 (186)
+.+-=.+|||.- |-+|-+...+|+.+|+.-.-.+- -|+.+.+.|-|+. ..+|||+|.- -..-+
T Consensus 124 NkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfF-RQIvSAVhYCHkn------rVvHRDLKLENILLD~-------- 188 (668)
T KOG0611|consen 124 NKDKIVIVMEYASGGELYDYISERGSLSEREARHFF-RQIVSAVHYCHKN------RVVHRDLKLENILLDQ-------- 188 (668)
T ss_pred CCceEEEEEEecCCccHHHHHHHhccccHHHHHHHH-HHHHHHHHHHhhc------cceecccchhheeecC--------
Confidence 445668999975 68999999999999998888888 5899999999999 9999997631 11111
Q ss_pred HHHHHHHHhhHhHHHHhhhhhhhh
Q psy13596 87 LTQALVDHLNVGVAQAYLNQKKLD 110 (186)
Q Consensus 87 l~~~Lv~~Ln~gvs~~y~Nqk~ie 110 (186)
|+=+...|||++.+|...+-+.
T Consensus 189 --N~NiKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 189 --NNNIKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred --CCCeeeeccchhhhhccccHHH
Confidence 2334456799999999877665
No 390
>KOG0603|consensus
Probab=64.68 E-value=4 Score=39.96 Aligned_cols=55 Identities=9% Similarity=0.139 Sum_probs=42.9
Q ss_pred CCeeeEEeeccc--cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF--GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl--G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+..+=++|||.+ |..|..|+. ...|+ +-.-+++ .+|.+.+.+.|.+ +.+|||++|
T Consensus 387 ~~~~~~~v~e~l~g~ell~ri~~-~~~~~-~e~~~w~-~~lv~Av~~LH~~------gvvhRDLkp 443 (612)
T KOG0603|consen 387 DGKEIYLVMELLDGGELLRRIRS-KPEFC-SEASQWA-AELVSAVDYLHEQ------GVVHRDLKP 443 (612)
T ss_pred CCceeeeeehhccccHHHHHHHh-cchhH-HHHHHHH-HHHHHHHHHHHhc------CeeecCCCh
Confidence 456789999998 466777766 22566 4444588 6999999999999 999999987
No 391
>cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX2 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=64.59 E-value=42 Score=28.87 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=38.1
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHH--HHHHHHhhhhccHH-----HHHHHHHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLV--DNFNSALKEIGDVE-----NWAKVIEEDMRLISAA 164 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~--~~~~~~LKEiGDve-----NWa~~iE~D~~~i~~t 164 (186)
++.|...+.++|.---.+.++-++|...+..|++-...+..+= ..+.++|-.+|||+ .+.+.-+.|+..+.++
T Consensus 31 i~~Le~~Lk~l~k~~~~lv~~rkela~~~~efa~s~~~L~~~E~~~~ls~~l~~laev~~ki~~~~~~qa~~d~~~l~e~ 110 (234)
T cd07664 31 FENLDQQLRKLHASVESLVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQDQAFADFYLFSEL 110 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 4444445555555555555555555555555555555554432 23445555555553 2444445556555555
Q ss_pred HH
Q psy13596 165 LE 166 (186)
Q Consensus 165 l~ 166 (186)
|+
T Consensus 111 L~ 112 (234)
T cd07664 111 LG 112 (234)
T ss_pred HH
Confidence 54
No 392
>KOG0586|consensus
Probab=64.17 E-value=5.7 Score=38.76 Aligned_cols=53 Identities=13% Similarity=0.138 Sum_probs=44.7
Q ss_pred eEEeecc-ccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISK-FGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmer-lG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
=++|||. .|-++.+-+.++++...++.--+- -|+++.++|-|++ .++|||+|.
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F-~q~vsaveYcH~k------~ivHrdLk~ 183 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKF-RQIVSAVEYCHSK------NIVHRDLKA 183 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhh-HHHHHHHHHHhhc------ceeccccch
Confidence 3677876 578899999988866668888888 4999999999999 999999874
No 393
>KOG1035|consensus
Probab=63.77 E-value=3.7 Score=43.25 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=43.8
Q ss_pred eeeEEeeccccccHHHHHHHcCCCC-cch-hhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHKEFS-LKN-TLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~kf~-~kt-Vl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|=||=|+.|-.+|..-+...|+|- ..+ +-.|- -++|..+.++|.. +.+|||+||
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLF-reIlEGLaYIH~~------giIHRDLKP 725 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLF-REILEGLAYIHDQ------GIIHRDLKP 725 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHH-HHHHHHHHHHHhC------ceeeccCCc
Confidence 5778999999999988888777554 222 23344 3689999999999 899999998
No 394
>KOG4279|consensus
Probab=62.83 E-value=7 Score=39.80 Aligned_cols=60 Identities=22% Similarity=0.164 Sum_probs=46.9
Q ss_pred cccccCCCeeeEEeecc-ccccHHHHHHHc-C--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 3 GQQEHNGNSYRFIIISK-FGSDLQKLLDEH-K--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 3 G~~~~~~~~yrfmVmer-lG~dL~~l~~~~-~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
|+.-.|| |--+.||- =|-||..|++.. | |=.++|+---+ -|+|..|.+.|.. +++|||||
T Consensus 639 Gs~senG--f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYt-kQILeGLkYLHen------~IVHRDIK 702 (1226)
T KOG4279|consen 639 GSVSENG--FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYT-KQILEGLKYLHEN------KIVHRDIK 702 (1226)
T ss_pred hccCCCC--eEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHH-HHHHHHhhhhhhc------ceeecccc
Confidence 4544343 55566665 589999999854 4 44788988888 5999999999999 99999997
No 395
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) []. It is also thought to modulate cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organisation during mitosis. Dynamitin is also involved in anchoring microtubules to centrosomes and may play a role in synapse formation during brain development []. ; GO: 0007017 microtubule-based process, 0005869 dynactin complex
Probab=62.82 E-value=1.2e+02 Score=27.55 Aligned_cols=61 Identities=16% Similarity=0.328 Sum_probs=43.2
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh-hccHHHHHHHHHHHHH
Q psy13596 99 VAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKE-IGDVENWAKVIEEDMR 159 (186)
Q Consensus 99 vs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKE-iGDveNWa~~iE~D~~ 159 (186)
+..+|.+......-...|...-....++..+|..++..++..+++ +..|++|.+.||.-+.
T Consensus 324 L~~lH~~a~~~~~~l~~le~~q~~l~~~l~~~~~~L~~ve~~~~~N~~~i~~n~~~le~Ri~ 385 (388)
T PF04912_consen 324 LKSLHEEAAEFSQTLSELESQQSDLQSQLKKWEELLNKVEEKFKENMETIEKNVKKLEERIA 385 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445666666666666666667777888888888888888888763 6666667666665544
No 396
>KOG0608|consensus
Probab=62.72 E-value=5.7 Score=39.91 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=45.7
Q ss_pred CCeeeEEeeccc-cccHHHHHHHcCCCCcch-hhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 9 GNSYRFIIISKF-GSDLQKLLDEHKEFSLKN-TLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerl-G~dL~~l~~~~~kf~~kt-Vl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
..+.=|.|||.. |-|+-.|+-+-|-|++.. -+.|| .+-..+++.|.- ++|||||||
T Consensus 700 DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIA--EltcAiesVHkm------GFIHRDiKP 757 (1034)
T KOG0608|consen 700 DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIA--ELTCAIESVHKM------GFIHRDIKP 757 (1034)
T ss_pred cCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHH--HHHHHHHHHHhc------cceecccCc
Confidence 345567899976 899999999888888654 35677 477899999999 999999998
No 397
>KOG2345|consensus
Probab=61.56 E-value=7.5 Score=34.78 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=49.1
Q ss_pred CCeeeEEeeccccc-cHHHHHHHcC----CCCcchhhcccchhHHHHHHHHHHhhhhhhhh--HHHhhhhh
Q psy13596 9 GNSYRFIIISKFGS-DLQKLLDEHK----EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQ--AVTSVIIG 72 (186)
Q Consensus 9 ~~~yrfmVmerlG~-dL~~l~~~~~----kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~--~~~r~i~~ 72 (186)
+...=|++++.+-. +|++-++.+. -+|+.-+|.|. ..+-+.|+.+|.. - +.||||||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if-~gic~gL~~lH~~------~~~yAH~DiKP 157 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIF-LGICRGLEALHEK------EPPYAHRDIKP 157 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHH-HHHHHHHHHHhcc------CCcccccCCCc
Confidence 56678999999874 4888888654 49999999999 7999999999999 6 89999998
No 398
>KOG0585|consensus
Probab=61.32 E-value=3.3 Score=39.85 Aligned_cols=76 Identities=7% Similarity=0.041 Sum_probs=47.5
Q ss_pred CCeeeEEeeccccccHHHHHHHcC---C-CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHK---E-FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAA 84 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~---k-f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~ 84 (186)
..++=|||+|.+- ...+ .+|+ - |+..+--.+- --|+..|+|.|.+ +.+||||||--..= +
T Consensus 181 ~s~~~YlVley~s--~G~v-~w~p~d~~els~~~Ar~yl-rDvv~GLEYLH~Q------giiHRDIKPsNLLl-----~- 244 (576)
T KOG0585|consen 181 ESDKLYLVLEYCS--KGEV-KWCPPDKPELSEQQARKYL-RDVVLGLEYLHYQ------GIIHRDIKPSNLLL-----S- 244 (576)
T ss_pred ccCceEEEEEecc--CCcc-ccCCCCcccccHHHHHHHH-HHHHHHHHHHHhc------CeeccccchhheEE-----c-
Confidence 3456788888764 2222 2333 1 4444444444 2489999999999 99999999821100 0
Q ss_pred HHHHHHHHHHhhHhHHHHh
Q psy13596 85 NDLTQALVDHLNVGVAQAY 103 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y 103 (186)
.+..|..-||||+..+
T Consensus 245 ---~~g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 245 ---SDGTVKISDFGVSNEF 260 (576)
T ss_pred ---CCCcEEeeccceeeec
Confidence 0234556689999876
No 399
>KOG0668|consensus
Probab=60.75 E-value=3.2 Score=37.01 Aligned_cols=44 Identities=18% Similarity=0.213 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHhhhhhhhhHHHhhhhh-----hHHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhh
Q psy13596 45 FPILKVMSMEYCYQRNWQKQAVTSVIIG-----LEVRRKEALSAANDLTQALVDHLNVGVAQAYLNQK 107 (186)
Q Consensus 45 ~~ml~~l~~~H~~~~~~~~~~~~r~i~~-----~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk 107 (186)
.++|+.|-+-|+. ++.|||+|| ..+.|+ ...||.|++.-|.-.+
T Consensus 139 ~elLkALdyCHS~------GImHRDVKPhNvmIdh~~rk-------------LrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 139 YELLKALDYCHSM------GIMHRDVKPHNVMIDHELRK-------------LRLIDWGLAEFYHPGK 187 (338)
T ss_pred HHHHHHHhHHHhc------CcccccCCcceeeechhhce-------------eeeeecchHhhcCCCc
Confidence 3689999999999 999999998 233444 6678888887776443
No 400
>KOG4721|consensus
Probab=58.64 E-value=9.2 Score=38.05 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=43.7
Q ss_pred eeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 12 YRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 12 yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
.--||||.+- --|+.+++..+..+.....+-. .+|-..|-|.|.+ ++||||+|
T Consensus 186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Ws-k~IA~GM~YLH~h------KIIHRDLK 239 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWS-KGIAGGMNYLHLH------KIIHRDLK 239 (904)
T ss_pred eeEEeeeccccccHHHHHhccCccCHHHHHHHH-HHhhhhhHHHHHh------hHhhhccC
Confidence 3458999886 5689998865577777777777 4788999999999 99999998
No 401
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=58.46 E-value=4.4 Score=33.90 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=49.9
Q ss_pred eeEEeecccccc-H--HHHHHHcCCCCcchhhcccchhHHHHHHHH-HHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHH
Q psy13596 12 YRFIIISKFGSD-L--QKLLDEHKEFSLKNTLTITDFPILKVMSME-YCYQRNWQKQAVTSVIIGLEVRRKEALSAANDL 87 (186)
Q Consensus 12 yrfmVmerlG~d-L--~~l~~~~~kf~~ktVl~la~~~ml~~l~~~-H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l 87 (186)
-.++|||.+|.+ + ..+ . ...++......+. .+++..|.+. |.. +.+|.|+.+- + ++-
T Consensus 98 ~~~lvME~Ig~~~~~~~~L-k-d~~~~~~~~~~i~-~~i~~~l~~l~H~~------glVHGDLs~~----N-IL~----- 158 (197)
T cd05146 98 KHVLVMSFIGDDQVPAPKL-K-DAKLNDEEMKNAY-YQVLSMMKQLYKEC------NLVHADLSEY----N-MLW----- 158 (197)
T ss_pred CCEEEEEEcCCCCccchhh-h-ccccCHHHHHHHH-HHHHHHHHHHHHhC------CeecCCCCHH----H-EEE-----
Confidence 479999999864 1 111 1 1145545555666 4899999999 555 9999996541 1 000
Q ss_pred HHHHHHHhhHhHHHHhhhhhhhhHHHHH
Q psy13596 88 TQALVDHLNVGVAQAYLNQKKLDAEAKQ 115 (186)
Q Consensus 88 ~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~ 115 (186)
.+.-++.||++-+--..++.+.+-=.++
T Consensus 159 ~~~~v~iIDF~qav~~~hp~a~~~l~RD 186 (197)
T cd05146 159 HDGKVWFIDVSQSVEPTHPHGLEFLFRD 186 (197)
T ss_pred ECCcEEEEECCCceeCCCCCHHHHHHHH
Confidence 0123567777766555555554433333
No 402
>cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. This subfamily consists of SNX1, SNX2, and similar proteins. SNX1 and SNX2 are components of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), wh
Probab=58.34 E-value=1.1e+02 Score=25.83 Aligned_cols=77 Identities=17% Similarity=0.263 Sum_probs=47.0
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHH--HHHHHHhhhhccHHHHHHH-----HHHHHHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLV--DNFNSALKEIGDVENWAKV-----IEEDMRLISA 163 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~--~~~~~~LKEiGDveNWa~~-----iE~D~~~i~~ 163 (186)
-++.|...+..+|.-.-.+.+.-++|...+..|++-...+...= ..+.++|..+|+++--... -..|+..+.+
T Consensus 20 ~i~~Le~~Lk~l~~~~e~lv~~r~ela~~~~~f~~s~~~L~~~E~~~~Ls~al~~la~~~~ki~~~~~~qa~~d~~~l~e 99 (224)
T cd07623 20 QIENLDQQLRKLHASVESLVNHRKELALNTGSFAKSAAMLSNCEEHTSLSRALSQLAEVEEKIEQLHGEQADTDFYILAE 99 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666666777777777777666666532 3566777777776544333 3445666666
Q ss_pred HHHH
Q psy13596 164 ALET 167 (186)
Q Consensus 164 tl~~ 167 (186)
+|+.
T Consensus 100 ~L~e 103 (224)
T cd07623 100 LLKD 103 (224)
T ss_pred HHHH
Confidence 6654
No 403
>KOG2148|consensus
Probab=57.52 E-value=78 Score=31.93 Aligned_cols=81 Identities=21% Similarity=0.376 Sum_probs=54.9
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHH-H-HHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNA-I-TFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALETA 168 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~T-a-~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~~v 168 (186)
+....+.|+..++.=.-++.+|...|-.+. + -++++ .+-..+.+.++.+|+|+-|+|+|--.-|-=+.-+-++|+.+
T Consensus 180 l~~ta~~~igeaeaFaE~L~reLq~LdgANiqsilaSE-~~Vn~ll~~ldaAl~~vd~~e~~Ld~yediL~hvre~iE~I 258 (867)
T KOG2148|consen 180 LLGTAVLGIGEAEAFAERLKRELQALDAANIQSILASE-PLVNELLNGLDAALNEVDDMEEWLDSYEDILRHVREDIESI 258 (867)
T ss_pred HHhHHhhchhhHHHHHHHHHHHHHhhhcccHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555556667666652221 1 12221 23456788889999999999999999998888899999988
Q ss_pred HcCC
Q psy13596 169 YEGS 172 (186)
Q Consensus 169 ~~~~ 172 (186)
.+..
T Consensus 259 eekn 262 (867)
T KOG2148|consen 259 EEKN 262 (867)
T ss_pred hccc
Confidence 7764
No 404
>PF10158 LOH1CR12: Tumour suppressor protein; InterPro: IPR018780 This entry represents a region of 130 amino acids that is the most conserved part of some hypothetical proteins involved in loss of heterozygosity, and thus, tumour suppression []. The exact function of these proteins is not known.
Probab=57.15 E-value=95 Score=24.50 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHH
Q psy13596 84 ANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISA 163 (186)
Q Consensus 84 ~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~ 163 (186)
+-.|+..+-.+++.-+..+-..|..|.+..|++-...++...+..+=.+..+.|...|++|-.+.+=...+..=+..+.+
T Consensus 29 ~l~Lc~R~Q~HL~~cA~~Va~~Q~~L~~riKevd~~~~~l~~~~~erqk~~~k~ae~L~kv~els~~L~~~~~lL~~~v~ 108 (131)
T PF10158_consen 29 VLRLCSRYQEHLNQCAEAVAFDQNALAKRIKEVDQEIAKLLQQMVERQKRFAKFAEQLEKVNELSQQLSRCQSLLNQTVP 108 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888888888999999988999888888888888888888888999998888888777777777777778
Q ss_pred HHHHHHcC
Q psy13596 164 ALETAYEG 171 (186)
Q Consensus 164 tl~~v~~~ 171 (186)
.|+.+++-
T Consensus 109 ~ie~LN~~ 116 (131)
T PF10158_consen 109 SIETLNEI 116 (131)
T ss_pred HHHHHHhh
Confidence 87777654
No 405
>cd07598 BAR_FAM92 The Bin/Amphiphysin/Rvs (BAR) domain of Family with sequence similarity 92 (FAM92). BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This group is composed of proteins from the family with sequence similarity 92 (FAM92), which were originally identified by the presence of the unknown domain DUF1208. This domain shows similarity to the BAR domains of sorting nexins. Mammals contain at least two member types, FAM92A and FAM92B, which may exist in many variants. The Xenopus homolog of FAM92A1, xVAP019, is essential for embryo survival and cell differentiation. FAM92A1 may be involved in regulating cell proliferation and apoptosis. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=56.37 E-value=57 Score=27.60 Aligned_cols=56 Identities=13% Similarity=0.295 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHH
Q psy13596 109 LDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALE 166 (186)
Q Consensus 109 ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~ 166 (186)
+++..+.|...+..|.+-+.......+.|.+++..+|+.|| ..+=+-|..+.+++.
T Consensus 16 lE~hl~~l~~~~~~lv~k~~~L~~~~~~fak~~~~la~~E~--~~L~~~L~~lae~~~ 71 (211)
T cd07598 16 VEKHFGELCQDFAAYTRKTARLRDKGDELAKSINAYADTEN--PSLKQGLKNFAECLA 71 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHH
Confidence 34556666666777777777777777777777777777763 444444444444433
No 406
>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Vsp5p is the yeast counterpart of human SNX1 and is part of the retromer complex, which functions in the endosome-to-Golgi retrieval of vacuolar protein sorting receptor Vps10p, the Golgi-resident membrane protein A-ALP, and endopeptidase Kex2. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in
Probab=54.62 E-value=1.3e+02 Score=25.12 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=38.2
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHH--HHHHHHhhhhccHH-----HHHHHHHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLV--DNFNSALKEIGDVE-----NWAKVIEEDMRLISAA 164 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~--~~~~~~LKEiGDve-----NWa~~iE~D~~~i~~t 164 (186)
++.|..++..+|.--..+.+.-++|...+..|++....+..+= ..+..+|..+|++. .+.+.=..|+..+.++
T Consensus 13 i~~Le~~Lk~l~~~~~~l~~~r~ela~~~~efa~~~~~L~~~E~~~~l~~~l~~~a~~~~~~~~~~~~~a~~e~~~l~~~ 92 (216)
T cd07627 13 LDSLESQLKQLYKSLELVSSQRKELASATEEFAETLEALSSLELSKSLSDLLAALAEVQKRIKESLERQALQDVLTLGVT 92 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555555555555555555533 34445555555442 2333444455555555
Q ss_pred HHH
Q psy13596 165 LET 167 (186)
Q Consensus 165 l~~ 167 (186)
|+.
T Consensus 93 L~e 95 (216)
T cd07627 93 LDE 95 (216)
T ss_pred HHH
Confidence 443
No 407
>PRK12274 serine/threonine protein kinase; Provisional
Probab=54.27 E-value=8.1 Score=33.14 Aligned_cols=71 Identities=7% Similarity=-0.057 Sum_probs=45.4
Q ss_pred eEEeecc-ccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhh-hhhH-HHHHHHHHHHHHHHH
Q psy13596 13 RFIIISK-FGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVI-IGLE-VRRKEALSAANDLTQ 89 (186)
Q Consensus 13 rfmVmer-lG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i-~~~e-~~rk~a~~s~~~l~~ 89 (186)
.|+||+. -|.+|..... .. .+.+. .+++..|.+.|.. +.+|+|| +|.- .... +
T Consensus 73 ~~lvmeyI~G~~L~~~~~---~~----~~~~~-~qi~~~L~~lH~~------GIvHrDL~kp~NILv~~----------~ 128 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPP---RG----DLAYF-RAARRLLQQLHRC------GVAHNDLAKEANWLVQE----------D 128 (218)
T ss_pred EEEEEeeecCccHHhhhh---hh----hHHHH-HHHHHHHHHHHHC------cCccCCCCCcceEEEcC----------C
Confidence 5899998 4888864332 11 12344 3788899999999 9999999 5510 0000 1
Q ss_pred HHHHHhhHhHHHHhhhhh
Q psy13596 90 ALVDHLNVGVAQAYLNQK 107 (186)
Q Consensus 90 ~Lv~~Ln~gvs~~y~Nqk 107 (186)
.-+..+|||.+..+....
T Consensus 129 g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 129 GSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred CCEEEEECCCceecCCcc
Confidence 235678999987555433
No 408
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=52.66 E-value=95 Score=28.73 Aligned_cols=51 Identities=6% Similarity=0.034 Sum_probs=35.0
Q ss_pred eeEEeeccc-cccHHHHHHHcC-CCCcchhhcccchhHHHH-HHHHHHhhhhhhhhHHHhhhhh
Q psy13596 12 YRFIIISKF-GSDLQKLLDEHK-EFSLKNTLTITDFPILKV-MSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 12 yrfmVmerl-G~dL~~l~~~~~-kf~~ktVl~la~~~ml~~-l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
-++||||.+ |.+|.++..... .+. ...++ .+++.. +.+.|.. +.+|+|++|
T Consensus 232 ~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia-~~~~~~~l~ql~~~------g~~H~D~hP 285 (437)
T TIGR01982 232 ERVLTMEWIDGIPLSDIAALDEAGLD---RKALA-ENLARSFLNQVLRD------GFFHADLHP 285 (437)
T ss_pred CceEEEEeECCcccccHHHHHhcCCC---HHHHH-HHHHHHHHHHHHhC------CceeCCCCc
Confidence 479999999 889888765332 332 23455 355553 5667777 999999875
No 409
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=52.39 E-value=4.1 Score=36.18 Aligned_cols=53 Identities=23% Similarity=0.367 Sum_probs=38.8
Q ss_pred eEEeeccccccHHHHHHHcC---C--CCcchh--hcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKFGSDLQKLLDEHK---E--FSLKNT--LTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerlG~dL~~l~~~~~---k--f~~ktV--l~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
+|++|++.-.||+++..... . ++...+ +.|+ +||++.....|.+ +.+|.+|++
T Consensus 114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT-~Q~I~lvA~Lh~~------GlVHgdi~~ 173 (288)
T PF14531_consen 114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLT-VQMIRLVANLHSY------GLVHGDIKP 173 (288)
T ss_dssp EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHH-HHHHHHHHHHHHT------TEEEST-SG
T ss_pred hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHH-HHHHHHHHHHhhc------ceEecccce
Confidence 79999999999999987532 1 222233 3455 7999999999999 999999986
No 410
>KOG4717|consensus
Probab=52.18 E-value=6.6 Score=38.65 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=61.3
Q ss_pred eEEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh-----hHHHHHHHHHHHH
Q psy13596 13 RFIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG-----LEVRRKEALSAAN 85 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~-----~e~~rk~a~~s~~ 85 (186)
=|||+|+=. -||.+..-+.. .+++..--+-- -|++..|-|-|+- ..+|||+|| -|+
T Consensus 92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF-~QI~~AI~YCHqL------HVVHRDLKPENVVFFEK---------- 154 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYF-AQIVHAISYCHQL------HVVHRDLKPENVVFFEK---------- 154 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhccccHHHHHHHH-HHHHHHHHHHhhh------hhhcccCCcceeEEeee----------
Confidence 477887643 48888877766 67776666655 5899999999999 999999998 222
Q ss_pred HHHHHHHHHhhHhHHHHhhhhhhhhH
Q psy13596 86 DLTQALVDHLNVGVAQAYLNQKKLDA 111 (186)
Q Consensus 86 ~l~~~Lv~~Ln~gvs~~y~Nqk~ie~ 111 (186)
-.||..-|||.+..|.--++++.
T Consensus 155 ---lGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 155 ---LGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred ---cCceEeeeccccccCCCcchhhc
Confidence 23788889999999998887774
No 411
>KOG0579|consensus
Probab=51.67 E-value=16 Score=36.99 Aligned_cols=52 Identities=10% Similarity=0.204 Sum_probs=43.8
Q ss_pred EEeecccc-ccHHHHHHHcC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 14 FIIISKFG-SDLQKLLDEHK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 14 fmVmerlG-~dL~~l~~~~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.|.+|-|| --...|.-.-+ .++..-+--++ .|||+.|-+.|+. .++|||+|.
T Consensus 105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc-~q~ldALn~LHs~------~iIHRDLKA 158 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVC-YQVLDALNWLHSQ------NIIHRDLKA 158 (1187)
T ss_pred EEEEeecCCchHhHHHHHhccccchHHHHHHH-HHHHHHHHHHhhc------chhhhhccc
Confidence 57777776 56777777777 79998888899 6999999999999 999999873
No 412
>KOG1095|consensus
Probab=51.37 E-value=11 Score=39.19 Aligned_cols=121 Identities=19% Similarity=0.278 Sum_probs=84.3
Q ss_pred eeEEeeccc-cccHHHHHHHc------C-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHH
Q psy13596 12 YRFIIISKF-GSDLQKLLDEH------K-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSA 83 (186)
Q Consensus 12 yrfmVmerl-G~dL~~l~~~~------~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s 83 (186)
-.++++|.+ |-||.+.++++ . .++.+-.+.+| +++=..+.+.+.+ .++||||- +|+=.|+.
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a-~dvA~G~~YLe~~------~fvHRDLA----aRNCLL~~ 837 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFA-LDVAKGMNYLESK------HFVHRDLA----ARNCLLDE 837 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHH-HHHhhhhHHHHhC------CCcCcchh----hhheeecc
Confidence 367888876 79999999998 6 67888889999 8999999999999 99999952 33322221
Q ss_pred HHHHHHHHHHHhhHhHHH-HhhhhhhhhHHH----------HHHHHHHHHHHhhHHHHHH---HHHHHHHHhhhhccHHH
Q psy13596 84 ANDLTQALVDHLNVGVAQ-AYLNQKKLDAEA----------KQLHTNAITFSKQTQQWLS---LVDNFNSALKEIGDVEN 149 (186)
Q Consensus 84 ~~~l~~~Lv~~Ln~gvs~-~y~Nqk~ie~E~----------K~L~~~Ta~laKqt~qW~~---l~~~~~~~LKEiGDveN 149 (186)
...|...|||+++ +|..+.-..... ..|.. ..|..+|+-|.= +-+=|.-+--=-|+.-|
T Consensus 838 -----~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n 910 (1025)
T KOG1095|consen 838 -----RRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN 910 (1025)
T ss_pred -----cCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcch
Confidence 2467888999998 777665444222 12233 479999999962 33444443334456666
Q ss_pred H
Q psy13596 150 W 150 (186)
Q Consensus 150 W 150 (186)
|
T Consensus 911 ~ 911 (1025)
T KOG1095|consen 911 F 911 (1025)
T ss_pred H
Confidence 5
No 413
>KOG1152|consensus
Probab=50.55 E-value=7.2 Score=38.60 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCeeeEEeecccc--ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh-hHHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFG--SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG-LEVRRKEALSAAN 85 (186)
Q Consensus 9 ~~~yrfmVmerlG--~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~-~e~~rk~a~~s~~ 85 (186)
..+|-+|+||-=| .||.++.+...+++++---.|- .|+--.+.-.|.. .++|||||- .-..-
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IF-kQV~agi~hlh~~------~ivhrdikdenvivd-------- 704 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIF-KQVVAGIKHLHDQ------GIVHRDIKDENVIVD-------- 704 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHH-HHHHhcccccccc------CceecccccccEEEe--------
Confidence 5689999999987 5777777766678887777777 5888889999999 999999873 10000
Q ss_pred HHHHHHHHHhhHhHH
Q psy13596 86 DLTQALVDHLNVGVA 100 (186)
Q Consensus 86 ~l~~~Lv~~Ln~gvs 100 (186)
++..+..||||-+
T Consensus 705 --~~g~~klidfgsa 717 (772)
T KOG1152|consen 705 --SNGFVKLIDFGSA 717 (772)
T ss_pred --cCCeEEEeeccch
Confidence 1446667888866
No 414
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX1 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=49.68 E-value=33 Score=29.60 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHH
Q psy13596 108 KLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVE 148 (186)
Q Consensus 108 ~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDve 148 (186)
.++.+.|.|...+..+.++-......+..|..++..||++|
T Consensus 33 ~LE~qLk~L~k~~~~lv~~r~eLa~~~~eFa~s~~~L~~~E 73 (234)
T cd07665 33 CEEQRLRKLHAVVETLVNHRKELALNTALFAKSLAMLGSSE 73 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35689999999999999999999999999999999999998
No 415
>KOG1166|consensus
Probab=49.54 E-value=9 Score=39.54 Aligned_cols=59 Identities=10% Similarity=0.097 Sum_probs=43.2
Q ss_pred cccCCCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 5 QEHNGNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 5 ~~~~~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
|-+.+.++ +|++.-- -+|.++.+.++-.+..-|+-+. +|||..++..|.. ++||-||||
T Consensus 763 ~~~~~~S~--lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~-~qml~ive~lH~~------~IIHgDiKP 822 (974)
T KOG1166|consen 763 HVFQNASV--LVSEYSPYGTLLDLINTNKVMDEYLVMFFS-CQMLRIVEHLHAM------GIIHGDIKP 822 (974)
T ss_pred HccCCcce--eeeeccccccHHHhhccCCCCCchhhhHHH-HHHHHHHHHHHhc------ceecccCCc
Confidence 33444443 4444432 3566666633368899999999 7999999999999 999999997
No 416
>PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking. This is the C-terminal dimerisation domain [].
Probab=49.53 E-value=1.1e+02 Score=25.10 Aligned_cols=75 Identities=15% Similarity=0.235 Sum_probs=42.3
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHH--HHHHhhhhccHH-----HHHHHHHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDN--FNSALKEIGDVE-----NWAKVIEEDMRLISAA 164 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~--~~~~LKEiGDve-----NWa~~iE~D~~~i~~t 164 (186)
++.+...+..++.-...+-++.+++...+..|+..-..|...=.. +.++|..+|++. .|.+....|+..+.++
T Consensus 33 ~~~le~~Lk~l~~~~~~l~~~~~~l~~~~~e~~~~~~~la~~E~~~~l~~~l~~l~~~~~~~~~~~~~~a~~~~~~l~~~ 112 (236)
T PF09325_consen 33 VDKLEEQLKKLYKSLERLVKRRQELASALAEFGSSFSQLAKSEEEKSLSEALSQLAEAFEKISELLEEQANQEEETLGEP 112 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 444555555566666666666666666666666666665554443 455555555532 3455555555555555
Q ss_pred HH
Q psy13596 165 LE 166 (186)
Q Consensus 165 l~ 166 (186)
|+
T Consensus 113 L~ 114 (236)
T PF09325_consen 113 LR 114 (236)
T ss_pred HH
Confidence 54
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=49.53 E-value=13 Score=32.00 Aligned_cols=47 Identities=13% Similarity=0.030 Sum_probs=35.8
Q ss_pred eeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+||||.+. .+|.++. .++.. +. .++...|...|.. +.+|+|++|
T Consensus 116 ~~~~lvmEyi~G~tL~~~~----~~~~~----~~-~~i~~~l~~lH~~------gi~H~Dikp 163 (232)
T PRK10359 116 HTYIMLIEYIEGVELNDMP----EISED----VK-AKIKASIESLHQH------GMVSGDPHK 163 (232)
T ss_pred CCeEEEEEEECCccHHHhh----hccHH----HH-HHHHHHHHHHHHc------CCccCCCCh
Confidence 45889999996 7887762 23332 23 3788999999999 999999887
No 418
>KOG0670|consensus
Probab=48.21 E-value=12 Score=36.80 Aligned_cols=55 Identities=7% Similarity=0.112 Sum_probs=48.5
Q ss_pred eeeEEeeccccccHHHHHHHcC---CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGSDLQKLLDEHK---EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~dL~~l~~~~~---kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+=-||+|-|..+|-.++++-| .+.++.|-.-| .|||-.|.-.-+- +.+|-||||
T Consensus 507 nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYa-qQLflALklLK~c------~vlHaDIKP 564 (752)
T KOG0670|consen 507 NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYA-QQLFLALKLLKKC------GVLHADIKP 564 (752)
T ss_pred ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHH-HHHHHHHHHHHhc------CeeecccCc
Confidence 3446999999999999999877 49999999999 6999888877777 999999998
No 419
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=47.57 E-value=17 Score=31.56 Aligned_cols=55 Identities=7% Similarity=-0.037 Sum_probs=41.1
Q ss_pred eeeEEeeccccc--cHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFGS--DLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG~--dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.--|+||+.++. +|.+++.... ..+....-.|. .++-..+-..|.. +.+|+|+.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll-~~la~~i~~LH~~------Gi~HgDL~~ 166 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLI-KRVATMVRDMHAA------GINHRDCYI 166 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHHHC------cCccCCCCh
Confidence 346899999986 7999987432 44444444566 3677888899999 999999765
No 420
>KOG1345|consensus
Probab=46.72 E-value=9.2 Score=34.85 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=38.8
Q ss_pred CCeeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 9 GNSYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 9 ~~~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
..+|-|.+||-.- -||-.=...+| .-+-....++ .|.+|.|.++|++ ..+|||||
T Consensus 93 t~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~-~ql~SAi~fMHsk------nlVHRdlK 148 (378)
T KOG1345|consen 93 TSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVF-AQLLSAIEFMHSK------NLVHRDLK 148 (378)
T ss_pred cCceEEEeeccCccchhhhhcCccc-ccHHHHHHHH-HHHHHHHHHhhcc------chhhcccc
Confidence 4468888998754 34444434333 3344445567 5999999999999 99999998
No 421
>PF14662 CCDC155: Coiled-coil region of CCDC155
Probab=44.65 E-value=2e+02 Score=24.47 Aligned_cols=72 Identities=22% Similarity=0.252 Sum_probs=42.1
Q ss_pred HhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHH
Q psy13596 94 HLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAAL 165 (186)
Q Consensus 94 ~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl 165 (186)
.|.+-|..+..|.+++.-|.+.|+..+..+--.+.++..-+.++...++-+--.-+-++.++..+..+-..+
T Consensus 5 dL~~~v~dL~~~n~~L~~en~kL~~~ve~~ee~na~L~~e~~~L~~q~~s~Qqal~~aK~l~eEledLk~~~ 76 (193)
T PF14662_consen 5 DLLSCVEDLQLNNQKLADENAKLQRSVETAEEGNAQLAEEITDLRKQLKSLQQALQKAKALEEELEDLKTLA 76 (193)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666677777777777777666666666666666666666655555444445555554444333333
No 422
>KOG0201|consensus
Probab=43.70 E-value=7.1 Score=37.02 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=42.3
Q ss_pred Eeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy13596 15 IIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVD 93 (186)
Q Consensus 15 mVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~ 93 (186)
++||-+| -++-++++.++-|.+.-+--|. ...|..+.++|.+ +.+|||||.... +.+. ...+.
T Consensus 88 iiMey~~gGsv~~lL~~~~~~~E~~i~~il-re~l~~l~ylH~~------~kiHrDIKaani-----l~s~----~g~vk 151 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGNILDEFEIAVIL-REVLKGLDYLHSE------KKIHRDIKAANI-----LLSE----SGDVK 151 (467)
T ss_pred HHHHHhcCcchhhhhccCCCCccceeeeeh-HHHHHHhhhhhhc------ceecccccccce-----eEec----cCcEE
Confidence 3444443 4555555544433333333333 4689999999999 999999875210 0000 13455
Q ss_pred HhhHhHHHHhhh
Q psy13596 94 HLNVGVAQAYLN 105 (186)
Q Consensus 94 ~Ln~gvs~~y~N 105 (186)
..+|||+-...|
T Consensus 152 l~DfgVa~ql~~ 163 (467)
T KOG0201|consen 152 LADFGVAGQLTN 163 (467)
T ss_pred EEecceeeeeec
Confidence 667777755444
No 423
>cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX2 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=43.41 E-value=48 Score=28.53 Aligned_cols=41 Identities=17% Similarity=0.327 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHH
Q psy13596 108 KLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVE 148 (186)
Q Consensus 108 ~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDve 148 (186)
.++.+.|.|...+..+.++-......+..|..++..||++|
T Consensus 33 ~Le~~Lk~l~k~~~~lv~~rkela~~~~efa~s~~~L~~~E 73 (234)
T cd07664 33 NLDQQLRKLHASVESLVCHRKELSANTAAFAKSAAMLGNSE 73 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 35688999999999999999999999999999999999987
No 424
>cd07624 BAR_SNX7_30 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 7 and 30. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. This subfamily consists of SNX7, SNX30, and similar proteins. The specific functions of SNX7 and SNX30 have not been elucidated. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=43.27 E-value=72 Score=26.34 Aligned_cols=57 Identities=9% Similarity=0.139 Sum_probs=47.3
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDV 147 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDv 147 (186)
-++.|..++..+..-..++-+..+++...+..|++.-..|...=..+..+|..+|+.
T Consensus 22 yi~~L~~~l~~~~kv~~Rl~kr~~el~~~~~efg~~~~~ls~~E~~L~~~L~~~~~~ 78 (200)
T cd07624 22 YLTLFGEKLGTIERISQRIHKERIEYFDELKEYSPIFQLWSASETELAPLLEGVSSA 78 (200)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 467777777878777788888889999999999999999998888888888888854
No 425
>cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. This subfamily consists of SNX1, SNX2, and similar proteins. SNX1 and SNX2 are components of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), wh
Probab=42.56 E-value=1.3e+02 Score=25.35 Aligned_cols=60 Identities=12% Similarity=0.252 Sum_probs=48.0
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHH
Q psy13596 108 KLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALETA 168 (186)
Q Consensus 108 ~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~~v 168 (186)
.++.+.|.|...+..+.++-......+..|..++..||++|- ...+-+.|..+.++-+.+
T Consensus 23 ~Le~~Lk~l~~~~e~lv~~r~ela~~~~~f~~s~~~L~~~E~-~~~Ls~al~~la~~~~ki 82 (224)
T cd07623 23 NLDQQLRKLHASVESLVNHRKELALNTGSFAKSAAMLSNCEE-HTSLSRALSQLAEVEEKI 82 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999984 245666666666654443
No 426
>KOG0607|consensus
Probab=42.20 E-value=18 Score=33.71 Aligned_cols=52 Identities=12% Similarity=0.179 Sum_probs=40.7
Q ss_pred eEEeeccc--cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 13 RFIIISKF--GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 13 rfmVmerl--G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
-|||||.+ |+=|+.|.++ .-|++.---++. --+-+.|-+.|.+ ++-|||+||
T Consensus 151 FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vv-kdia~aLdFlH~k------gIAHRDlKP 204 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKR-KHFNEREASRVV-KDIASALDFLHTK------GIAHRDLKP 204 (463)
T ss_pred EEEEEecccCchHHHHHHHh-hhccHHHHHHHH-HHHHHHHHHHhhc------CcccccCCc
Confidence 46899976 7888888772 268876655565 3577889999999 999999997
No 427
>cd07630 BAR_SNX_like The Bin/Amphiphysin/Rvs (BAR) domain of uncharacterized Sorting Nexins. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This subfamily is composed of uncharacterized proteins with similarity to sorting nexins (SNXs), which are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=40.04 E-value=1.9e+02 Score=24.14 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=46.0
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHH----HHHHHhhhhccHH-----HHHHHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVD----NFNSALKEIGDVE-----NWAKVIEEDMRLIS 162 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~----~~~~~LKEiGDve-----NWa~~iE~D~~~i~ 162 (186)
++.+...+-++|..--.+-+..+.|...+..|++-.......=. .+.+.|--+|||+ +..+.-..|...+.
T Consensus 13 l~~l~~~lk~~~~~~~~lv~~rk~la~~~~~fs~al~~L~~~E~~~~~~l~~~l~~lse~~e~i~~~~~~~a~~d~~~Lg 92 (198)
T cd07630 13 NTKLSANMKEAAEKFLKIVNTEQRLANALGHLSSSLQLCVGLDEASVVALNRLCTKLSEALEEAKENIEVVAGNNENTLG 92 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 44455555555555555666666766676677666655554321 4556666666664 34555566777777
Q ss_pred HHHHH
Q psy13596 163 AALET 167 (186)
Q Consensus 163 ~tl~~ 167 (186)
++|++
T Consensus 93 ~~L~~ 97 (198)
T cd07630 93 LTLDL 97 (198)
T ss_pred HHHHH
Confidence 77775
No 428
>cd07628 BAR_Atg24p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Atg24p. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Atg24p is involved in membrane fusion events at the vacuolar surface during pexophagy. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=39.91 E-value=2.1e+02 Score=23.40 Aligned_cols=54 Identities=17% Similarity=0.133 Sum_probs=41.6
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHhhhhc
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDN-FNSALKEIG 145 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~-~~~~LKEiG 145 (186)
++.|..++..+..-..++-+...+|......|+++-..|..+-.. +..+|+.+|
T Consensus 13 ~~~L~~~L~~l~ki~~Rl~kr~~~l~~d~~efg~~~~~L~~~E~~~L~~~l~~~~ 67 (185)
T cd07628 13 SDKLDENLTKIDKIFAKVVKRQSDLSVDYADLATQFQKLGSLESGEITEPFKIFS 67 (185)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhhhHHHHHHH
Confidence 445555555555556666677788888888999999999988888 888888888
No 429
>PF09177 Syntaxin-6_N: Syntaxin 6, N-terminal; InterPro: IPR015260 Members of this entry, which are found in the amino terminus of various SNARE proteins, adopt a structure consisting of an antiparallel three-helix bundle. Their exact function has not been determined, though it is known that they regulate the SNARE motif, as well as mediate various protein-protein interactions involved in membrane-transport []. ; GO: 0048193 Golgi vesicle transport, 0016020 membrane; PDB: 1LVF_B 2C5I_T 2C5J_A 2C5K_T 4DND_A.
Probab=39.10 E-value=1.5e+02 Score=21.56 Aligned_cols=57 Identities=16% Similarity=0.247 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHH--HHhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy13596 115 QLHTNAITFSKQTQQWLSLVDNFN--SALKEI-GDVENWAKVIEEDMRLISAALETAYEG 171 (186)
Q Consensus 115 ~L~~~Ta~laKqt~qW~~l~~~~~--~~LKEi-GDveNWa~~iE~D~~~i~~tl~~v~~~ 171 (186)
++..+..+..+.-..|..+..... ..++++ .++++=-+.||-|+..|+.|+..|...
T Consensus 9 ev~~sl~~l~~~~~~~~~~~~~~~~~~e~~~~~~eL~~~l~~ie~~L~DL~~aV~ive~n 68 (97)
T PF09177_consen 9 EVQSSLDRLESLYRRWQRLRSDTSSSEELKWLKRELRNALQSIEWDLEDLEEAVRIVEKN 68 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555566666667776655443 222222 356666788999999999999998865
No 430
>KOG3091|consensus
Probab=38.06 E-value=2.2e+02 Score=27.60 Aligned_cols=114 Identities=17% Similarity=0.147 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhHHHhhhhhh-HHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHH
Q psy13596 45 FPILKVMSMEYCYQRNWQKQAVTSVIIGL-EVRRKEALSAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITF 123 (186)
Q Consensus 45 ~~ml~~l~~~H~~~~~~~~~~~~r~i~~~-e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~l 123 (186)
.|||.+|.+.|.- |+ .-..|.+. |+.|..+-.-...|.+- ..+-.+|+.+|.=.+..+.+.+........+
T Consensus 390 ~RiLRv~ikqeil-----r~-~G~~L~~~EE~Lr~Kldtll~~ln~P--nq~k~Rl~~L~e~~r~q~~~~~~~~~~~iD~ 461 (508)
T KOG3091|consen 390 HRILRVMIKQEIL-----RK-RGYALTPDEEELRAKLDTLLAQLNAP--NQLKARLDELYEILRMQNSQLKLQESYWIDF 461 (508)
T ss_pred HHHHHHHHHHHHH-----hc-cCCcCCccHHHHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHhhcchhccccceeech
Confidence 3688888888877 22 22244443 33443333333333332 5666888888877666653333322222233
Q ss_pred HhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHH-HHHHHHHHHHHc
Q psy13596 124 SKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDM-RLISAALETAYE 170 (186)
Q Consensus 124 aKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~-~~i~~tl~~v~~ 170 (186)
.+.-+.-.. +.....-|+-+-|-.+-+-+|+ ..|.+.++.+.+
T Consensus 462 ~~~~e~~e~----lt~~~e~l~~Lv~Ilk~d~edi~~~l~E~~~~~~~ 505 (508)
T KOG3091|consen 462 DKLIEMKEH----LTQEQEALTKLVNILKGDQEDIKHQLIEDLEICRK 505 (508)
T ss_pred hhhHHHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHhh
Confidence 333332222 2233333444445555666677 666777766543
No 431
>PF05700 BCAS2: Breast carcinoma amplified sequence 2 (BCAS2); InterPro: IPR008409 This family consists of several eukaryotic sequences of unknown function. The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins []. BCAS2 is a putative spliceosome associated protein [].
Probab=37.96 E-value=2.4e+02 Score=23.66 Aligned_cols=14 Identities=21% Similarity=0.529 Sum_probs=8.1
Q ss_pred eeccccccHHHHHH
Q psy13596 16 IISKFGSDLQKLLD 29 (186)
Q Consensus 16 VmerlG~dL~~l~~ 29 (186)
+|+.+|.+.|.++.
T Consensus 125 Ll~~~g~naW~~~n 138 (221)
T PF05700_consen 125 LLSKYGENAWLIHN 138 (221)
T ss_pred HHHHHhHHHHHHHH
Confidence 35556666666555
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=36.52 E-value=9.7 Score=27.19 Aligned_cols=51 Identities=6% Similarity=0.071 Sum_probs=35.0
Q ss_pred eeeEEeecccc-ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 11 SYRFIIISKFG-SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 11 ~yrfmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
.+.+++|+.+. .++..+ +..+...+. .++.+.+...|.... +..+|+|++|
T Consensus 66 ~~~~~v~e~~~g~~~~~~-------~~~~~~~~~-~~~~~~l~~lh~~~~---~~i~H~Dl~~ 117 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV-------SEEEKEDIA-EQLAELLAKLHQLPL---LVLCHGDLHP 117 (155)
T ss_pred CccEEEEEecCCeecccC-------CHHHHHHHH-HHHHHHHHHHhCCCc---eEEEecCCCc
Confidence 57899999874 444432 344556666 578889999998610 2588999775
No 433
>KOG0588|consensus
Probab=35.48 E-value=18 Score=36.31 Aligned_cols=85 Identities=13% Similarity=0.170 Sum_probs=60.9
Q ss_pred CCCeeeEEeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHH--HHHHHHHHH
Q psy13596 8 NGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEV--RRKEALSAA 84 (186)
Q Consensus 8 ~~~~yrfmVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~--~rk~a~~s~ 84 (186)
-++.|=|+|.|.- |-.|.+.+-..|+|+.+--..-- -|+|..+.+=|.. .+.|||+||-.. ..+
T Consensus 82 e~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff-~QIi~gv~yCH~~------~icHRDLKpENlLLd~~------ 148 (786)
T KOG0588|consen 82 ENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFF-RQILDGVSYCHAF------NICHRDLKPENLLLDVK------ 148 (786)
T ss_pred ccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHH-HHHHHHHHHHhhh------cceeccCCchhhhhhcc------
Confidence 3456667777764 68888888888877766665555 4999999999999 999999987322 111
Q ss_pred HHHHHHHHHHhhHhHHHHhhhhhhhh
Q psy13596 85 NDLTQALVDHLNVGVAQAYLNQKKLD 110 (186)
Q Consensus 85 ~~l~~~Lv~~Ln~gvs~~y~Nqk~ie 110 (186)
++ +..-|||.|.+-.+-+-++
T Consensus 149 ----~n-IKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 149 ----NN-IKIADFGMASLEVPGKLLE 169 (786)
T ss_pred ----cC-EeeeccceeecccCCcccc
Confidence 33 6667888887766655544
No 434
>KOG4278|consensus
Probab=35.30 E-value=31 Score=34.94 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=47.1
Q ss_pred ccHHHHHHHcC--CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHhH
Q psy13596 22 SDLQKLLDEHK--EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLNVGV 99 (186)
Q Consensus 22 ~dL~~l~~~~~--kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln~gv 99 (186)
-+|-+.+.+|+ -.+.--.|+.| .||-+.|+|.-.+ .+||||+- +|+ .|.. -+.+|...|||+
T Consensus 348 GNLLdYLRecnr~ev~avvLlyMA-tQIsSaMeYLEkk------nFIHRDLA----ARN-CLVg----EnhiVKvADFGL 411 (1157)
T KOG4278|consen 348 GNLLDYLRECNRSEVPAVVLLYMA-TQISSAMEYLEKK------NFIHRDLA----ARN-CLVG----ENHIVKVADFGL 411 (1157)
T ss_pred ccHHHHHHHhchhhcchhHHHHHH-HHHHHHHHHHHHh------hhhhhhhh----hhh-cccc----ccceEEeeccch
Confidence 46777888898 46666667778 4999999999888 99999941 222 1111 167788889999
Q ss_pred HHH
Q psy13596 100 AQA 102 (186)
Q Consensus 100 s~~ 102 (186)
+.+
T Consensus 412 sRl 414 (1157)
T KOG4278|consen 412 SRL 414 (1157)
T ss_pred hhh
Confidence 974
No 435
>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Vsp5p is the yeast counterpart of human SNX1 and is part of the retromer complex, which functions in the endosome-to-Golgi retrieval of vacuolar protein sorting receptor Vps10p, the Golgi-resident membrane protein A-ALP, and endopeptidase Kex2. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in
Probab=35.16 E-value=1.6e+02 Score=24.51 Aligned_cols=56 Identities=20% Similarity=0.308 Sum_probs=39.7
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHH
Q psy13596 108 KLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAA 164 (186)
Q Consensus 108 ~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~t 164 (186)
.++.+.|.+...+..+.++-......+..|..++..||.+|- ...+.+=+..+.++
T Consensus 15 ~Le~~Lk~l~~~~~~l~~~r~ela~~~~efa~~~~~L~~~E~-~~~l~~~l~~~a~~ 70 (216)
T cd07627 15 SLESQLKQLYKSLELVSSQRKELASATEEFAETLEALSSLEL-SKSLSDLLAALAEV 70 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHhHHHHHHHHHH
Confidence 355778888888888888888888888888888888888872 13344434444433
No 436
>PF08397 IMD: IRSp53/MIM homology domain; InterPro: IPR013606 The IMD (IRSp53 and MIM (missing in metastases) homology) domain is a BAR-like domain of approximately 250 amino acids found at the N-terminal in the insulin receptor tyrosine kinase substrate p53 (IRSp53) and in the evolutionarily related IRSp53/MIM family. In IRSp53, a ubiquitous regulator o the actin cytoskeleton, the IMD domain acts as conserved F-actin bundling domain involved in filopodium formation. Filopodium-inducing IMD activity is regulated by Cdc42 and Rac1 (Rho-family GTPases) and is SH3-independent [, , ]. The IRSp53/MIM family is a novel F-actin bundling protein family that includes invertebrate relatives: Vertebrate MIM (missing in metastasis), an actin-binding scaffold protein that may be involved in cancer metastasis. Vertebrate ABBA-1, a MIM-related protein. Vertebrate brain-specific angiogenesis inhibitor 1-associated protein 2 (BAI1-associated protein 2) or insulin receptor tyrosine kinase substrate p53 (IRSp53), a multifunctional adaptor protein that links Rac1 with a Wiskott-Aldrich syndrome family verprolin-homologous protein 2 (WAVE2) to induce lamellipodia or Cdc42 with Mena to induce filopodia []. Vertebrate brain-specific angiogenesis inhibitor 1-associated protein 2-like proteins 1 and 2 (BAI1-associated protein 2-like proteins 1 and 2). Drosophila melanogaster (Fruit fly) CG32082-PA. Caenorhabditis elegans M04F3.5 protein. The vertebrate IRSp53/MIM family is divided into two major groups: the IRSp53 subfamily and the MIM/ABBA subfamily. The putative invertebrate homologues are positioned between them. The IRSp53 subfamily members contain an SH3 domain, and the MIM/ABBA subfamily proteins contain a WH2 (WASP-homology 2) domain. The vertebrate SH3-containing subfamily is further divided into three groups according to the presence or absence of the WWB and the half-CRIB motif. The IMD domain can bind to and bundle actin filaments, bind to membranes and interact with the small GTPase Rac [, ]. The IMD domain folds as a coiled coil of three extended alpha-helices and a shorter C-terminal helix. Helix 4 packs tightly against the other three helices, and thus represents an integral part of the domain. The fold of the IMD domain closely resembles that of the BAR (Bin-Amphiphysin-RVS) domain, a functional module serving both as a sensor and inducer of membrane curvature []. The WH2 domain performs a scaffolding function [].; GO: 0008093 cytoskeletal adaptor activity, 0017124 SH3 domain binding, 0007165 signal transduction, 0046847 filopodium assembly; PDB: 2D1L_A 3OK8_B 1WDZ_B 1Y2O_A 2YKT_A.
Probab=34.82 E-value=2.7e+02 Score=23.18 Aligned_cols=85 Identities=19% Similarity=0.183 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHhh--hhccHHH
Q psy13596 73 LEVRRKEALSAANDLTQALVDHLNVGVAQAYLNQKKLDAE-AKQLHTNAITFSKQTQQWLSLVDNFNSALK--EIGDVEN 149 (186)
Q Consensus 73 ~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E-~K~L~~~Ta~laKqt~qW~~l~~~~~~~LK--EiGDveN 149 (186)
.+..=..|+.++...+....+.+.. ++..-.+... .++ ...|..-+...++...++..++..|...|= --..++.
T Consensus 18 ~~~kY~~al~~~~~a~~~f~dal~k-i~~~A~~s~~-s~~lG~~L~~~s~~~r~i~~~~~~~~~~~~~~li~pLe~~~e~ 95 (219)
T PF08397_consen 18 LGKKYQKALRAMSQAAAAFFDALQK-IGDMASNSRG-SKELGDALMQISEVHRRIENELEEVFKAFHSELIQPLEKKLEE 95 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCCc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455666666666666666643 2222122112 222 233455566677788888888888887552 2267778
Q ss_pred HHHHHHHHHH
Q psy13596 150 WAKVIEEDMR 159 (186)
Q Consensus 150 Wa~~iE~D~~ 159 (186)
|.+.|..-.+
T Consensus 96 d~k~i~~~~K 105 (219)
T PF08397_consen 96 DKKYITQLEK 105 (219)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhhHHHH
Confidence 8877764433
No 437
>cd07666 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 7. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. The specific function of SNX7 is still unknown. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=33.57 E-value=3e+02 Score=23.94 Aligned_cols=57 Identities=9% Similarity=0.193 Sum_probs=48.3
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDV 147 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDv 147 (186)
-++.++.+++.+.....+|-++..++...+..|.+...-|...=..+...|.++|..
T Consensus 62 y~d~L~~~L~~ieki~~Rl~kr~~ey~~~~~~fgk~~~lws~~E~~L~~~L~~~a~~ 118 (243)
T cd07666 62 YVEAFSQKINVLDKISQRIYKEQREYFEELKEYGPIYTLWSASEEELADSLKGMASC 118 (243)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 467788888888888888888888999999999999999999888888888888764
No 438
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=32.13 E-value=52 Score=26.80 Aligned_cols=56 Identities=9% Similarity=0.117 Sum_probs=41.0
Q ss_pred CeeeEEeecccc--ccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 10 NSYRFIIISKFG--SDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 10 ~~yrfmVmerlG--~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...-|+|++.+. .+|.+++.....++....-.+. .++-.-+.++|.. +..|.|+.+
T Consensus 89 ~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll-~~l~~~i~~lH~~------gi~H~Dl~~ 146 (206)
T PF06293_consen 89 GYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELL-RALARLIAKLHDA------GIYHGDLNP 146 (206)
T ss_pred ceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHH-HHHHHHHHHHHHC------cCCCCCCCc
Confidence 333589999985 4899999853334444445556 3677888999999 999999765
No 439
>KOG4626|consensus
Probab=31.72 E-value=93 Score=31.54 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=53.1
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSK---QTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMR 159 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laK---qt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~ 159 (186)
.-+++.+.+.+|.|-..|-+|.-.|..+...|.. +..-.+..+.+.-..+||+|||.-=+..+++-++
T Consensus 380 al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGnt~ke~g~v~~A~q~y~rAI~ 450 (966)
T KOG4626|consen 380 ALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMGNTYKEMGDVSAAIQCYTRAIQ 450 (966)
T ss_pred HHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcchHHHHhhhHHHHHHHHHHHHh
Confidence 3467788899999999998888888888877764 4445566666777789999999988888877655
No 440
>cd07609 BAR_SIP3_fungi The Bin/Amphiphysin/Rvs (BAR) domain of fungal Snf1p-interacting protein 3. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This group is composed of mostly uncharacterized fungal proteins with similarity to Saccharomyces cerevisiae Snf1p-interacting protein 3 (SIP3). These proteins contain an N-terminal BAR domain followed by a Pleckstrin Homology (PH) domain. SIP3 interacts with SNF1 protein kinase and activates transcription when anchored to DNA. It may function in the SNF1 pathway. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=31.43 E-value=3.3e+02 Score=23.15 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCeeeEEeeccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHH
Q psy13596 9 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLT 88 (186)
Q Consensus 9 ~~~yrfmVmerlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~ 88 (186)
..+|-+..+.++|.+|.+++. .++..+ +-.......-= +.++..+|.|--..|+..-..-
T Consensus 57 dqdYT~~al~~f~~~l~e~~~--------~ll~~~--~~~~~~~~~pL------~~f~k~~i~~~Ke~rk~Fd~~q---- 116 (214)
T cd07609 57 DQDYTPLALKRFGDGLKDFWG--------GVLSAL--KGNDSLILDPL------RSFVKSDIRPYKELRKNFEYYQ---- 116 (214)
T ss_pred CchhHHHHHHHHHHHHHHHHH--------HHHHHH--hcchHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH----
Confidence 357888888999999999985 222222 10001111111 2556677766555555444333
Q ss_pred HHHHHHhhHhHHHHhh-hhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q psy13596 89 QALVDHLNVGVAQAYL-NQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALK 142 (186)
Q Consensus 89 ~~Lv~~Ln~gvs~~y~-Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LK 142 (186)
...+..|..-++.--. ++..++..+.+|...=..|.+.+=...-.+..+...|.
T Consensus 117 ~kyD~~L~r~~~~sk~K~p~~l~Eda~qL~e~Rk~Y~~aSLDyv~qi~~lq~~lD 171 (214)
T cd07609 117 RKYDSMLARYVAQSKTKEPSSLREDAFQLFEARKAYLKASLDLVIAIPQLRLTLD 171 (214)
T ss_pred HHHHHHHHHHhcCCCCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444443332211 45566666777766666777766666655555555553
No 441
>KOG0694|consensus
Probab=31.02 E-value=16 Score=36.38 Aligned_cols=56 Identities=7% Similarity=-0.012 Sum_probs=44.0
Q ss_pred CCCeeeEEeeccccccHHHHHHH--cCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhh
Q psy13596 8 NGNSYRFIIISKFGSDLQKLLDE--HKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIG 72 (186)
Q Consensus 8 ~~~~yrfmVmerlG~dL~~l~~~--~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~ 72 (186)
...++=|.|||...-.- ++-. .++|++...--.| ..+...|.+.|++ +++.||+|.
T Consensus 439 QT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfya-Aev~l~L~fLH~~------~IIYRDlKL 496 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYA-AEVVLGLQFLHEN------GIIYRDLKL 496 (694)
T ss_pred ccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHH-HHHHHHHHHHHhc------Cceeeecch
Confidence 35678899999875333 4443 3489988777777 6899999999999 999999874
No 442
>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.
Probab=30.79 E-value=2.5e+02 Score=21.60 Aligned_cols=69 Identities=17% Similarity=0.311 Sum_probs=48.2
Q ss_pred hHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhc---cHHHHHHHHHHHHHHHHHHHHH
Q psy13596 98 GVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIG---DVENWAKVIEEDMRLISAALET 167 (186)
Q Consensus 98 gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiG---DveNWa~~iE~D~~~i~~tl~~ 167 (186)
++..-|.|-++.....++ ........+....|+.++|+|..++.-.. ++++|.+-++-=...+...|..
T Consensus 10 r~~ae~~N~rkr~~~e~~-~~~~~~~~~~~~~ll~v~D~le~a~~~~~~~~~~~~~~~g~~~i~~~l~~~L~~ 81 (137)
T cd00446 10 RALAEFENYRKRTERERE-EARKYAIEKFAKDLLPVLDNLERALEAAKKEEELKNLVEGVEMTLKQLLDVLEK 81 (137)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 445556776666644444 23334778899999999999999998654 5788998777666666666654
No 443
>cd07666 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 7. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. The specific function of SNX7 is still unknown. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.
Probab=29.67 E-value=3.8e+02 Score=23.31 Aligned_cols=38 Identities=26% Similarity=0.444 Sum_probs=32.6
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Q psy13596 122 TFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLI 161 (186)
Q Consensus 122 ~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i 161 (186)
........|..-++.++..+| +|++.|-+..-+||+.+
T Consensus 181 ~~~~ev~~~e~kve~a~~~~k--~e~~Rf~~~k~~D~k~~ 218 (243)
T cd07666 181 LLKEEIEKLEDKVECANNALK--ADWERWKQNMQTDLRSA 218 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 444456779999999999999 89999999999999875
No 444
>COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]
Probab=29.17 E-value=4.7e+02 Score=24.32 Aligned_cols=51 Identities=16% Similarity=0.221 Sum_probs=34.9
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHhhH--HHHHHHHHHHHH---HhhhhccHHHHHH
Q psy13596 102 AYLNQKKLDAEAKQLHTNAITFSKQT--QQWLSLVDNFNS---ALKEIGDVENWAK 152 (186)
Q Consensus 102 ~y~Nqk~ie~E~K~L~~~Ta~laKqt--~qW~~l~~~~~~---~LKEiGDveNWa~ 152 (186)
+-.|.|+-.+|++.|...+..|++.. .-....+.++-. .=|-|-++|+|..
T Consensus 233 Lqa~dkk~skEe~~l~N~iK~fAr~lT~~Df~~F~~~~~e~v~~~kri~~LqewR~ 288 (432)
T COG5114 233 LQAKDKKRSKEECGLVNSIKWFARYLTKSDFNVFFRDILEGVYIEKRIHELQEWRN 288 (432)
T ss_pred HHhhhhhccHHHHhHHHhhhHHHHhhcchhHHHHHHHHhhhhhHHHHHHHHHHHHh
Confidence 33455666689999999999999843 233444443333 3478999999987
No 445
>COG4842 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.05 E-value=80 Score=23.22 Aligned_cols=29 Identities=31% Similarity=0.564 Sum_probs=24.4
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhhccH
Q psy13596 119 NAITFSKQTQQWLSLVDNFNSALKEIGDV 147 (186)
Q Consensus 119 ~Ta~laKqt~qW~~l~~~~~~~LKEiGDv 147 (186)
+..+|...-.+|-+-+.+++..|.+||+-
T Consensus 48 a~~~f~~~~~~w~~~~~~l~~~l~~i~~~ 76 (97)
T COG4842 48 AAEAFQSEQQQWNQAATELNEALEQLADA 76 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578889999999999999999888875
No 446
>COG3452 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=29.00 E-value=2e+02 Score=25.94 Aligned_cols=62 Identities=16% Similarity=0.063 Sum_probs=46.9
Q ss_pred CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHh
Q psy13596 34 FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLNVGVAQAY 103 (186)
Q Consensus 34 f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln~gvs~~y 103 (186)
|..+.+|-..---.+.++...|-- ....++ .+++.|+.+.+.++.+-..|...||..+..+-
T Consensus 13 ~~~s~~LPali~~~i~vv~sv~~~------~~~~~~--~qe~lrq~v~~~l~~ir~qLE~qlNg~I~~vk 74 (297)
T COG3452 13 LLKSNYLPALIGAVILVVVSVHAW------LQLRRV--SQERLRQLVKQQLNIIRTQLETQLNGNIQLVK 74 (297)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHH------HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 444444443311246668888888 777788 79999999999999999999999999887653
No 447
>KOG0576|consensus
Probab=28.33 E-value=13 Score=37.22 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=37.4
Q ss_pred EEeecccc-ccHHHHHHHcCCCCcchhhcccch--hHHHHHHHHHHhhhhhhhhHHHhhhh
Q psy13596 14 FIIISKFG-SDLQKLLDEHKEFSLKNTLTITDF--PILKVMSMEYCYQRNWQKQAVTSVII 71 (186)
Q Consensus 14 fmVmerlG-~dL~~l~~~~~kf~~ktVl~la~~--~ml~~l~~~H~~~~~~~~~~~~r~i~ 71 (186)
.+.||.+| -+||+||---|-++ + +|||.. ..|..+.+.|.. +.+|||||
T Consensus 88 wicMEycgggslQdiy~~Tgpls--e-lqiayvcRetl~gl~ylhs~------gk~hRdiK 139 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLS--E-LQIAYVCRETLQGLKYLHSQ------GKIHRDIK 139 (829)
T ss_pred EEEEEecCCCcccceeeecccch--h-HHHHHHHhhhhccchhhhcC------Cccccccc
Confidence 68999998 78999998444333 2 455521 269999999999 99999998
No 448
>cd07663 BAR_SNX5 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 5. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX5, abundantly expressed in macrophages, regulates macropinocytosis, a process that enables cells to internalize large amounts of external solutes. It may also be a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, acting as a mammalian equivalent of yeast Vsp17p. It
Probab=27.58 E-value=4e+02 Score=22.89 Aligned_cols=77 Identities=9% Similarity=0.091 Sum_probs=46.0
Q ss_pred HHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHhhhhccHHHHHHHHHH-----HHHHHHHH
Q psy13596 91 LVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLV-DNFNSALKEIGDVENWAKVIEE-----DMRLISAA 164 (186)
Q Consensus 91 Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~-~~~~~~LKEiGDveNWa~~iE~-----D~~~i~~t 164 (186)
-+..+...+..++...-++-+--|+|...+..+++-......-- ..+.++|-.+|||+-=.+.++. |...+.++
T Consensus 31 ~l~~l~~~Lk~a~~~~~~lv~~rkela~~~~~~s~al~~l~~ee~t~L~kals~lae~~Ek~~~l~~r~A~~d~~~L~e~ 110 (218)
T cd07663 31 FLVNYYNRIKDSCAKADKMTRSHKNVADDYIHISAALNSVAAEEPTVIKKYLLKVAELFEKLRKVEDRVASDQDLKLTEL 110 (218)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHHH
Confidence 34555666666666666666666666665555554333332111 1466777778887655554444 88888888
Q ss_pred HHH
Q psy13596 165 LET 167 (186)
Q Consensus 165 l~~ 167 (186)
|++
T Consensus 111 L~~ 113 (218)
T cd07663 111 LRY 113 (218)
T ss_pred HHH
Confidence 876
No 449
>PRK14145 heat shock protein GrpE; Provisional
Probab=26.02 E-value=4e+02 Score=22.46 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=47.9
Q ss_pred HhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHH
Q psy13596 97 VGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVENWAKVIEEDMRLISAALE 166 (186)
Q Consensus 97 ~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveNWa~~iE~D~~~i~~tl~ 166 (186)
-++..-|.|-++--...++ ....-...+....|+-++|+|..+|.-.+|...+.+-|+-=...+..+|.
T Consensus 69 lR~~AEfeN~rkR~~kE~e-~~~~~a~e~~~~~LLpV~DnLerAl~~~~~~~~l~~Gv~mi~k~l~~vL~ 137 (196)
T PRK14145 69 QRLKAEFENYRKRTEKEKS-EMVEYGKEQVILELLPVMDNFERALASSGDYNSLKEGIELIYRQFKKILD 137 (196)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHHhHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777666544444 33334577788999999999999998888877766666555555555554
No 450
>KOG1026|consensus
Probab=25.55 E-value=69 Score=32.51 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=51.5
Q ss_pred eEEeecccc-ccHHHHHHHcC-C-------------CCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHH
Q psy13596 13 RFIIISKFG-SDLQKLLDEHK-E-------------FSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRR 77 (186)
Q Consensus 13 rfmVmerlG-~dL~~l~~~~~-k-------------f~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~r 77 (186)
=.||+|..- -||.+++..++ + ++.+-.|.|| .|+=..|++.-++ .++|||+ +.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA-~QIAaGM~YLs~~------~FVHRDL-----AT 631 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA-TQIAAGMEYLSSH------HFVHRDL-----AT 631 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHhC------cccccch-----hh
Confidence 368888876 79999998654 2 4556689999 6999999999999 9999994 22
Q ss_pred HHHHHHHHHHHHHHHHHhhHhHHH
Q psy13596 78 KEALSAANDLTQALVDHLNVGVAQ 101 (186)
Q Consensus 78 k~a~~s~~~l~~~Lv~~Ln~gvs~ 101 (186)
+..|.+. +.+|..=|+|+++
T Consensus 632 RNCLVge----~l~VKIsDfGLsR 651 (774)
T KOG1026|consen 632 RNCLVGE----NLVVKISDFGLSR 651 (774)
T ss_pred hhceecc----ceEEEecccccch
Confidence 2222221 3445555677764
No 451
>PF08654 DASH_Dad2: DASH complex subunit Dad2; InterPro: IPR013963 The DASH complex is a ~10 subunit microtubule-binding complex that is transferred to the kinetochore prior to mitosis []. In Saccharomyces cerevisiae (Baker's yeast) DASH forms both rings and spiral structures on microtubules in vitro [, ].
Probab=25.44 E-value=3e+02 Score=20.80 Aligned_cols=43 Identities=19% Similarity=0.360 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccH-HHHHHHHH
Q psy13596 113 AKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDV-ENWAKVIE 155 (186)
Q Consensus 113 ~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDv-eNWa~~iE 155 (186)
.++|..-++.++.+.+....-++..+++-.-++.| +||-.++.
T Consensus 16 L~~l~~lS~~L~~qle~L~~kl~~m~dg~e~Va~Vl~NW~nV~r 59 (103)
T PF08654_consen 16 LKQLRDLSADLASQLEALSEKLETMADGAEAVASVLANWQNVFR 59 (103)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhHHHHHH
Confidence 34444444555555554444444444444444443 67765543
No 452
>cd07621 BAR_SNX5_6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Members of this subfamily include SNX5, SNX6, the mammalian SNX32, and similar proteins. SNX5 and SNX6 may be components of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, acting as a mammalian equivalent of yeast Vsp17p. The function of SNX32 is still unknown. BAR domain
Probab=24.67 E-value=3.6e+02 Score=23.06 Aligned_cols=76 Identities=12% Similarity=0.119 Sum_probs=40.7
Q ss_pred HHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHhhhhccHHHHHHHH-----HHHHHHHHHHH
Q psy13596 92 VDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVD-NFNSALKEIGDVENWAKVI-----EEDMRLISAAL 165 (186)
Q Consensus 92 v~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~-~~~~~LKEiGDveNWa~~i-----E~D~~~i~~tl 165 (186)
+..+...+..++..--.+-+.-|+|...+..|++-...+...-+ .+.++|-.+||++-=.+.+ ..|...+.++|
T Consensus 33 l~~l~~~Lk~~~~~~~~lv~~rkela~~~~~fs~al~~L~~~E~t~L~~~ls~lae~~ek~~~l~~r~A~~d~l~L~e~L 112 (219)
T cd07621 33 LVEYHNRIKDATAKADKMTRKHKDVADSYIKISAALTQLATSEPTPLDKFLLKVAETFEKLRKLEGRVASDEDLKLSDTL 112 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Confidence 34444445555555555555566666666666665555444322 2455566666665333333 34666666666
Q ss_pred HH
Q psy13596 166 ET 167 (186)
Q Consensus 166 ~~ 167 (186)
++
T Consensus 113 ~~ 114 (219)
T cd07621 113 RY 114 (219)
T ss_pred HH
Confidence 65
No 453
>KOG0587|consensus
Probab=24.60 E-value=47 Score=34.29 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=53.0
Q ss_pred cCCCeeeEEeecccc-ccHHHHHHH-cC-CCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhh-HHHHHHHHH
Q psy13596 7 HNGNSYRFIIISKFG-SDLQKLLDE-HK-EFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGL-EVRRKEALS 82 (186)
Q Consensus 7 ~~~~~yrfmVmerlG-~dL~~l~~~-~~-kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~-e~~rk~a~~ 82 (186)
.++.+-=.||||.|| -|.-+|.+. .| ++..--+.-|- .-.|-.+.-.|+. ..+|||||-+ -....
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~-re~lrgl~HLH~n------kviHRDikG~NiLLT~---- 158 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYIL-REILRGLAHLHNN------KVIHRDIKGQNVLLTE---- 158 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHH-HHHHHHHHHHhhc------ceeeecccCceEEEec----
Confidence 356667789999998 455555542 15 78887777776 5678888888888 9999998741 11111
Q ss_pred HHHHHHHHHHHHhhHhHHH
Q psy13596 83 AANDLTQALVDHLNVGVAQ 101 (186)
Q Consensus 83 s~~~l~~~Lv~~Ln~gvs~ 101 (186)
+.=|-.+|||||.
T Consensus 159 ------e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 159 ------NAEVKLVDFGVSA 171 (953)
T ss_pred ------cCcEEEeeeeeee
Confidence 3346678888873
No 454
>PF04799 Fzo_mitofusin: fzo-like conserved region; InterPro: IPR006884 This entry represents the heptad repeat domain which is conserved at the C terminus of Fzo/mitofusion family of GTPases. Fzo is a mediator of mitochondrial fusion during spermatogenesis []. This conserved region is also found in the human mitofusin protein []. This domain forms a dimeric antiparallel coiled coil structure, which has been proposed to act as a mitochodrial tether before vesicle fusion [].; GO: 0003924 GTPase activity, 0006184 GTP catabolic process, 0008053 mitochondrial fusion, 0005741 mitochondrial outer membrane, 0016021 integral to membrane; PDB: 1T3J_A.
Probab=24.27 E-value=3.2e+02 Score=22.74 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhccHHH
Q psy13596 100 AQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGDVEN 149 (186)
Q Consensus 100 s~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGDveN 149 (186)
+.+-.+.+.++.|.++|....+.+-+....-..+-++++.-..|+.+|++
T Consensus 116 ~~Vd~~~~eL~~eI~~L~~~i~~le~~~~~~k~LrnKa~~L~~eL~~F~~ 165 (171)
T PF04799_consen 116 QQVDQTKNELEDEIKQLEKEIQRLEEIQSKSKTLRNKANWLESELERFQE 165 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 455
>KOG0057|consensus
Probab=24.14 E-value=2.3e+02 Score=27.98 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=40.5
Q ss_pred HHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q psy13596 90 ALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSAL 141 (186)
Q Consensus 90 ~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~L 141 (186)
..+..+|...-+.|.|+..--..--.....-.++.....+|+.+.+-+++.+
T Consensus 217 ~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~i 268 (591)
T KOG0057|consen 217 AYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAI 268 (591)
T ss_pred HHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHH
Confidence 3566788999999999876555555556677788999999999988877765
No 456
>KOG4645|consensus
Probab=24.14 E-value=39 Score=36.39 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=57.2
Q ss_pred Eeeccc-cccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy13596 15 IIISKF-GSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVD 93 (186)
Q Consensus 15 mVmerl-G~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~ 93 (186)
|.||.| |.+|.++.+..+-. .--|.+.-+.|.|..+-+.|++ ++|||||||.... |. -+.++.
T Consensus 1311 IFMEyC~~GsLa~ll~~gri~-dE~vt~vyt~qll~gla~LH~~------gIVHRDIK~aNI~----Ld-----~~g~iK 1374 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIE-DEMVTRVYTKQLLEGLAYLHEH------GIVHRDIKPANIL----LD-----FNGLIK 1374 (1509)
T ss_pred HHHHHhccCcHHHHHHhcchh-hhhHHHHHHHHHHHHHHHHHhc------CceecCCCcccee----ee-----cCCcEE
Confidence 345555 46677776632212 2233333346899999999999 9999999973221 10 044777
Q ss_pred HhhHhHHHHhhhhh-hhhHHHHHHHHHHHHHH
Q psy13596 94 HLNVGVAQAYLNQK-KLDAEAKQLHTNAITFS 124 (186)
Q Consensus 94 ~Ln~gvs~~y~Nqk-~ie~E~K~L~~~Ta~la 124 (186)
-.|||.|..-.|.. .+..+.+. -.||+.|.
T Consensus 1375 ~~DFGsa~ki~~~~~~~~~el~~-~~GT~~YM 1405 (1509)
T KOG4645|consen 1375 YGDFGSAVKIKNNAQTMPGELQS-MMGTPMYM 1405 (1509)
T ss_pred eecccceeEecCchhcCCHHHHh-hcCCchhc
Confidence 88999887655553 45555555 45555553
No 457
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=23.82 E-value=3.3e+02 Score=20.71 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=24.0
Q ss_pred chhHHHHHHHHHHhhhhhhhhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q psy13596 44 DFPILKVMSMEYCYQRNWQKQAVTSVIIGLEVRRKEALSAANDLTQALVDHLN 96 (186)
Q Consensus 44 ~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e~~rk~a~~s~~~l~~~Lv~~Ln 96 (186)
++..+..+...|+. +.+++. .++..+..+...+..|.....
T Consensus 31 d~~~~~~~l~~~~~--------~~~e~~----~~~~~~~~l~~~~~~L~~~~~ 71 (213)
T cd00176 31 DLESVEALLKKHEA--------LEAELA----AHEERVEALNELGEQLIEEGH 71 (213)
T ss_pred CHHHHHHHHHHHHH--------HHHHHH----HCHHHHHHHHHHHHHHHhcCC
Confidence 35566666666666 555532 345556666666666666543
No 458
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=22.76 E-value=75 Score=24.47 Aligned_cols=22 Identities=23% Similarity=0.638 Sum_probs=18.9
Q ss_pred HhhHHHHHHHHHHHHHHhhhhc
Q psy13596 124 SKQTQQWLSLVDNFNSALKEIG 145 (186)
Q Consensus 124 aKqt~qW~~l~~~~~~~LKEiG 145 (186)
+.....+...+++|...|||||
T Consensus 103 ~~~~~~fa~~~~~f~~~i~~lG 124 (124)
T PF02662_consen 103 APEGKRFAEIVNEFTERIKELG 124 (124)
T ss_pred cccHHHHHHHHHHHHHHHHHcC
Confidence 4567788889999999999998
No 459
>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins.
Probab=22.47 E-value=2.9e+02 Score=19.52 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=16.9
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhcc
Q psy13596 108 KLDAEAKQLHTNAITFSKQTQQWLSLVDNFNSALKEIGD 146 (186)
Q Consensus 108 ~ie~E~K~L~~~Ta~laKqt~qW~~l~~~~~~~LKEiGD 146 (186)
.+..|..++...+.......+.=..-++.+-++++++|+
T Consensus 44 ~i~~e~~~ll~~~n~l~~dv~~k~~~v~~~~~~v~~~g~ 82 (90)
T PF06103_consen 44 PITKEINDLLHNTNELLEDVNEKLEKVDPVFEAVADLGE 82 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 333444444444444444444433344444444444443
No 460
>KOG4571|consensus
Probab=21.35 E-value=2.9e+02 Score=24.92 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q psy13596 151 AKVIEEDMRLISAALETAYEG 171 (186)
Q Consensus 151 a~~iE~D~~~i~~tl~~v~~~ 171 (186)
|..+||.|+.+-..|.-++..
T Consensus 271 a~~lerEI~ylKqli~e~~~~ 291 (294)
T KOG4571|consen 271 ASELEREIRYLKQLILEVYKK 291 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 455666666666666655543
No 461
>COG4663 FcbT1 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.28 E-value=1.3e+02 Score=27.74 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=55.9
Q ss_pred CCeeeEEe----eccccccHHHHHHHcCCCCcchhhcccchhHHHHHHHHHHhhhhhhhhHHHhhhhhhH----HHHHHH
Q psy13596 9 GNSYRFII----ISKFGSDLQKLLDEHKEFSLKNTLTITDFPILKVMSMEYCYQRNWQKQAVTSVIIGLE----VRRKEA 80 (186)
Q Consensus 9 ~~~yrfmV----merlG~dL~~l~~~~~kf~~ktVl~la~~~ml~~l~~~H~~~~~~~~~~~~r~i~~~e----~~rk~a 80 (186)
|...-||| .+.|-++.+.||+ |-+.-|.+-|+......... -.|++...+ .--.++
T Consensus 247 g~t~~~lvNk~k~d~LP~~yq~il~--------~A~~aA~~~M~~kyd~~n~~--------a~~~l~~~g~klr~f~~eI 310 (363)
T COG4663 247 GPTVHFLVNKKKWDGLPKEYQAILR--------TACRAANADMLNKYDDRNPT--------ALKELVAEGAKLRPFSQEI 310 (363)
T ss_pred CceeeeeechhhhccCCHHHHHHHH--------HHHHHhhHHHHHHHHhhChH--------HHHHHHhCCceeccCCHHH
Confidence 44445555 3555556666655 55666666687764433332 122221100 012344
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHhhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy13596 81 LSAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKQLHTNAITFSKQTQQWLSLVDN 136 (186)
Q Consensus 81 ~~s~~~l~~~Lv~~Ln~gvs~~y~Nqk~ie~E~K~L~~~Ta~laKqt~qW~~l~~~ 136 (186)
+.++...++. +|.....-+-..|+...+-..|++++-.|.++.+-
T Consensus 311 l~a~~e~~~e-----------~~ae~aa~np~fKeI~esq~af~~~~~~W~qiae~ 355 (363)
T COG4663 311 LKACREASDE-----------VYAEKAAKNPLFKEIYESQKAFRKEAYLWAQIAEY 355 (363)
T ss_pred HHHHHHHHHH-----------HHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444443 44444555556777788888999999999987653
No 462
>KOG4512|consensus
Probab=20.75 E-value=1.5e+02 Score=28.74 Aligned_cols=58 Identities=22% Similarity=0.267 Sum_probs=47.2
Q ss_pred HHHhhHhH--HHHhhhhhhhhHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHhhhhccHHHHH
Q psy13596 92 VDHLNVGV--AQAYLNQKKLDAEAKQLHTNAITFSK-QTQQWLSLVDNFNSALKEIGDVENWA 151 (186)
Q Consensus 92 v~~Ln~gv--s~~y~Nqk~ie~E~K~L~~~Ta~laK-qt~qW~~l~~~~~~~LKEiGDveNWa 151 (186)
++....|= -+.|.|-+++..-++-|..|+.|+.+ .++|=-+.+++|+-.|+-| .|+|.
T Consensus 118 ~~ea~~~kp~~Q~~S~kk~~~~aaq~lLkgaerl~~si~eq~Nk~v~dF~~ellrl--rq~Wr 178 (625)
T KOG4512|consen 118 DDEAEAGKPTNQEKSNKKREKEAAQKLLKGAERLNPSIIEQQNKKVEDFRFELLRL--RQFWR 178 (625)
T ss_pred hhhccCCCchHHHHhhhHHHHHHHHHHHhhhhhcChhhhHHhhhhHHHHHHHHHHH--HHHHH
Confidence 33444443 56889999999889999999999987 7888889999999998877 68887
Done!