BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13597
(962 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 188/379 (49%), Gaps = 63/379 (16%)
Query: 481 LPDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYS-TG 539
L + G I D A +WKVG +G GGFG +Y A + +++ V+KVE S G
Sbjct: 19 LAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG 78
Query: 540 PLFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSD 599
PLF E FY R AKPE ++ W + +KLK LG+P ++ G + NG SYRF+I+ +FGSD
Sbjct: 79 PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSD 137
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
LQK+ + + K FS K L + +LD LEYIH YVH D+K +N+LL + V +V
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLV 196
Query: 659 DFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITIST 718
D+GLA RY + HKA+ + K H+G T
Sbjct: 197 DYGLAYRYC-PEGVHKAYAADPKRCHDG-------------------------------T 224
Query: 719 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDP- 777
+ +TS+ AH G SR D+EIL Y ++ TG LPW E+ LKDP
Sbjct: 225 IEFTSIDAHNGV-APSRRGDLEILGYCMIQWLTGHLPW--------------EDNLKDPK 269
Query: 778 -AKFFTTHYKEPVPGKPIKKGIFDCVNHLNAYVFVEMFKYIASTK---FEVDPDYDKLKQ 833
+ Y+E + K C NA E+ KY+ + K + P Y+ L+
Sbjct: 270 YVRDSKIRYRENIASLMDK-----CFPAANA--PGEIAKYMETVKLLDYTEKPLYENLRD 322
Query: 834 LFVKALQKNGLKMDGKLNF 852
+ ++ L+ G K DGKL+
Sbjct: 323 ILLQGLKAIGSKDDGKLDL 341
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
L+ LR+ LD LEYIH YVH D+K +N+LL + V +VD+GLA RY + HK
Sbjct: 155 LQLSLRI-LDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYRYC-PEGVHK 211
Query: 79 AHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
A+ + K H+GT+ +TS+ AH G SR D+EIL Y ++ TG LPW + P+
Sbjct: 212 AYAADPKRCHDGTIEFTSIDAHNGV-APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270
Query: 139 VLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTK---FEVAPDYDKLKQMFVKAL 195
V K ++ A + P + E+ KY+ + K + P Y+ L+ + ++ L
Sbjct: 271 VRDSKIRYRENIASLMDKCF--PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328
Query: 196 QKNGLKMDGKLNF 208
+ G K DGKL+
Sbjct: 329 KAIGSKDDGKLDL 341
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 183/370 (49%), Gaps = 59/370 (15%)
Query: 488 GAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYS-TGPLFVEQN 546
G I D AKK WKVG +G GGFG +Y A + +++ V+KVE S GPLF E
Sbjct: 26 GEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELK 85
Query: 547 FYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE 606
FY R AKPE ++ W + +KLK LG+P ++ G + NG SYRF+I+ +FGSDLQK+ +
Sbjct: 86 FYQRAAKPEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSDLQKIYEA 144
Query: 607 H-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ K FS K L + +LD LEYIH YVH D+K +N+LL + V +VD+GLA R
Sbjct: 145 NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYR 203
Query: 666 YKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLV 725
Y + HK + + K H+G T+ +TS+
Sbjct: 204 YC-PEGVHKEYKEDPKRCHDG-------------------------------TIEFTSID 231
Query: 726 AHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHY 785
AH G SR D+EIL Y ++ TG LPW + P+ V K ++ A +
Sbjct: 232 AHNGV-APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF 290
Query: 786 KEPVPGKPIKKGIFDCVNHLNAYVFVEMFKYIASTK---FEVDPDYDKLKQLFVKALQKN 842
P KP E+ KY+ + K + P Y+ L+ + ++ L+
Sbjct: 291 --PEKNKP-----------------GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331
Query: 843 GLKMDGKLNF 852
G K DGKL+
Sbjct: 332 GSKDDGKLDL 341
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
L+ LR+ LD LEYIH YVH D+K +N+LL + V +VD+GLA RY + HK
Sbjct: 155 LQLSLRI-LDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYRYC-PEGVHK 211
Query: 79 AHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
+ + K H+GT+ +TS+ AH G SR D+EIL Y ++ TG LPW + P+
Sbjct: 212 EYKEDPKRCHDGTIEFTSIDAHNGV-APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270
Query: 139 VLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTK---FEVAPDYDKLKQMFVKAL 195
V K ++ A + P + E+ KY+ + K + P Y+ L+ + ++ L
Sbjct: 271 VRDSKIRYRENIASLMDKCF--PEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328
Query: 196 QKNGLKMDGKLNF 208
+ G K DGKL+
Sbjct: 329 KAIGSKDDGKLDL 341
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 183/370 (49%), Gaps = 59/370 (15%)
Query: 488 GAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYS-TGPLFVEQN 546
G I D AKK WKVG +G GGFG +Y A + +++ V+KVE S GPLF E
Sbjct: 26 GEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELK 85
Query: 547 FYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE 606
FY R AKPE ++ W + +KLK LG+P ++ G + NG SYRF+I+ +FGSDLQK+ +
Sbjct: 86 FYQRAAKPEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSDLQKIYEA 144
Query: 607 H-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ K FS K L + +LD LEYIH YVH D+K +N+LL + V +VD+GLA R
Sbjct: 145 NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYR 203
Query: 666 YKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLV 725
Y + HK + + K H+G T+ +TS+
Sbjct: 204 YC-PEGVHKEYKEDPKRCHDG-------------------------------TIEFTSID 231
Query: 726 AHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHY 785
AH G SR D+EIL Y ++ TG LPW + P+ V K ++ A +
Sbjct: 232 AHNGV-APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF 290
Query: 786 KEPVPGKPIKKGIFDCVNHLNAYVFVEMFKYIASTK---FEVDPDYDKLKQLFVKALQKN 842
P KP E+ KY+ + K + P Y+ L+ + ++ L+
Sbjct: 291 --PEKNKP-----------------GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331
Query: 843 GLKMDGKLNF 852
G K DGKL+
Sbjct: 332 GSKDDGKLDL 341
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
L+ LR+ LD LEYIH YVH D+K +N+LL + V +VD+GLA RY + HK
Sbjct: 155 LQLSLRI-LDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYRYC-PEGVHK 211
Query: 79 AHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
+ + K H+GT+ +TS+ AH G SR D+EIL Y ++ TG LPW + P+
Sbjct: 212 EYKEDPKRCHDGTIEFTSIDAHNGV-APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270
Query: 139 VLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTK---FEVAPDYDKLKQMFVKAL 195
V K ++ A + P + E+ KY+ + K + P Y+ L+ + ++ L
Sbjct: 271 VRDSKIRYRENIASLMDKCF--PEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328
Query: 196 QKNGLKMDGKLNF 208
+ G K DGKL+
Sbjct: 329 KAIGSKDDGKLDL 341
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 146/294 (49%), Gaps = 38/294 (12%)
Query: 484 PIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYS-TGPLF 542
P G + D W +GK +GSGGFG +Y A N + D ++V+KVEY GPLF
Sbjct: 24 PFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFP-TNKPEKDA-RHVVKVEYQENGPLF 81
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
E FY R AK + ++ W + K+L LG+P FY G E G SYRF+++ + G DLQK
Sbjct: 82 SELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG-SGLTEFKGRSYRFMVMERLGIDLQK 140
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
+ ++ F L +G +LD LEYIH YVH D+K AN+LLG + V + D+GL
Sbjct: 141 ISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ-VYLADYGL 199
Query: 663 ASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYT 722
+ RY + NHK + + HNG T+ +T
Sbjct: 200 SYRYC-PNGNHKQYQENPRKGHNG-------------------------------TIEFT 227
Query: 723 SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKD 776
SL AH+G SR D+EIL Y +L G LPW + P V K LL +
Sbjct: 228 SLDAHKGV-ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDE 280
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 100/196 (51%), Gaps = 16/196 (8%)
Query: 22 VLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
VL+L LD LEYIH YVH D+K AN+LLG + V + D+GL+ RY + NHK
Sbjct: 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ-VYLADYGLSYRYC-PNGNHK 210
Query: 79 AHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
+ + HNGT+ +TSL AH+G SR D+EIL Y +L G LPW + P
Sbjct: 211 QYQENPRKGHNGTIEFTSLDAHKGV-ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269
Query: 139 VLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIA---STKFEVAPDYDKLKQMFVKAL 195
V K LL + + + P E+ +++ S ++ P+Y LK K L
Sbjct: 270 VQTAKTNLLDELPQ--SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALK----KIL 323
Query: 196 QKNGLKMDGKLNFEEK 211
+G+ + G L+F K
Sbjct: 324 NPHGIPL-GPLDFSTK 338
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 488 GAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVN---DNKVDGYKYVMKVEYSTGPLFVE 544
G + D + + WK+ G +Y A D+ K+ +K++ G LF E
Sbjct: 33 GTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNE 92
Query: 545 QNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLL 604
QNF+ R AKP + WKK L +PT Q+ YRF+++ G LQ L
Sbjct: 93 QNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQD----KYRFLVLPSLGRSLQSAL 148
Query: 605 DEHKE--FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
D + S ++ L + LLD+LE++H YVH ++ N+ + + Q+ V + +G
Sbjct: 149 DVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE-DQSQVTLAGYGF 207
Query: 663 ASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYT 722
A RY + H A++ +S H G+ L +
Sbjct: 208 AFRYCPS-GKHVAYVEGSRSPHEGD-------------------------------LEFI 235
Query: 723 SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKF 780
S+ H+G SR D++ L Y +L G LPWT E ++ K++ + P F
Sbjct: 236 SMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPF 292
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 20 RWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
R VL++A LD+LE++H YVH ++ N+ + + Q+ V + +G A RY +
Sbjct: 159 RSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED-QSQVTLAGYGFAFRYCPSG-K 216
Query: 77 HKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP 136
H A++ +S H G L + S+ H+G SR D++ L Y +L G LPWT
Sbjct: 217 HVAYVEGSRSPHEGDLEFISMDLHKGCGP-SRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275
Query: 137 EKVLAMKEELLKDPAKFF--TTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKA 194
E ++ K++ + P F H+ P + + K + + +E P Y L+
Sbjct: 276 EDIMKQKQKFVDKPGPFVGPCGHWIRPS-ETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334
Query: 195 LQ 196
LQ
Sbjct: 335 LQ 336
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 82/354 (23%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ +GSG FG++Y TD +V +K+E C K +H +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEV-----AIKLE---------------CVKTKHPQ 48
Query: 559 AWKKEKKLKTL----GLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ K K + G+PT + ++N +++ G L+ L + ++FSLK
Sbjct: 49 LHIESKIYKMMQGGVGIPTIRWCGAEGDYN-----VMVMELLGPSLEDLFNFCSRKFSLK 103
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
L + ++ +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D +
Sbjct: 104 TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163
Query: 674 KAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTT 733
E K+ + +Y +I+T H G + +
Sbjct: 164 HIPYRENKN------------------------LTGTARYASINT--------HLGIEQS 191
Query: 734 SRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKP 793
R D+E L Y L++ N GSLPW Q K +++ + K +T + G P
Sbjct: 192 RRD-DLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245
Query: 794 IKKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
+ F + S +F+ PDY L+QLF + G D
Sbjct: 246 SE--------------FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 285
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 19 LRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
L+ VL LA + +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D
Sbjct: 102 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161
Query: 76 NHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ- 134
+ E K+ GT Y S+ H G + + R D+E L Y L++ N GSLPW +
Sbjct: 162 HQHIPYRENKNL-TGTARYASINTHLGIEQSRRD-DLESLGYVLMYFNLGSLPWQGLKAA 219
Query: 135 -QPEKVLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVK 193
+ +K + E+ + P + Y P F + S +F+ PDY L+Q+F
Sbjct: 220 TKRQKYERISEKKMSTPIEVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 275
Query: 194 ALQKNGLKMD 203
+ G D
Sbjct: 276 LFHRQGFSYD 285
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 82/354 (23%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ +GSG FG++Y TD +V +K+E C K +H +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEV-----AIKLE---------------CVKTKHPQ 50
Query: 559 AWKKEKKLKTL----GLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ K K + G+PT + ++N +++ G L+ L + ++FSLK
Sbjct: 51 LHIESKIYKMMQGGVGIPTIRWCGAEGDYN-----VMVMELLGPSLEDLFNFCSRKFSLK 105
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
L + ++ +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D +
Sbjct: 106 TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165
Query: 674 KAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTT 733
E K+ + +Y +I+T H G + +
Sbjct: 166 HIPYRENKN------------------------LTGTARYASINT--------HLGIEQS 193
Query: 734 SRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKP 793
R D+E L Y L++ N GSLPW Q K +++ + K +T + G P
Sbjct: 194 RRD-DLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERISEKKMSTPIEVLCKGYP 247
Query: 794 IKKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
+ F + S +F+ PDY L+QLF + G D
Sbjct: 248 SE--------------FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 19 LRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
L+ VL LA + +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D
Sbjct: 104 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
Query: 76 NHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ- 134
+ E K+ GT Y S+ H G + + R D+E L Y L++ N GSLPW +
Sbjct: 164 HQHIPYRENKNL-TGTARYASINTHLGIEQSRRD-DLESLGYVLMYFNLGSLPWQGLKAA 221
Query: 135 -QPEKVLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVK 193
+ +K + E+ + P + Y P F + S +F+ PDY L+Q+F
Sbjct: 222 TKRQKYERISEKKMSTPIEVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277
Query: 194 ALQKNGLKMD 203
+ G D
Sbjct: 278 LFHRQGFSYD 287
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 147/354 (41%), Gaps = 82/354 (23%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ +GSG FG++Y + N G + +K+E C K +H +
Sbjct: 11 YRLGRKIGSGSFGDIY-----LGANIASGEEVAIKLE---------------CVKTKHPQ 50
Query: 559 AWKKEKKLKTL----GLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ K K + G+P+ + ++N +++ G L+ L + ++FSLK
Sbjct: 51 LHIESKFYKMMQGGVGIPSIKWCGAEGDYN-----VMVMELLGPSLEDLFNFCSRKFSLK 105
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
L + ++ +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D +
Sbjct: 106 TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165
Query: 674 KAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTT 733
E K+ + +Y +I+T H G + +
Sbjct: 166 HIPYRENKN------------------------LTGTARYASINT--------HLGIEQS 193
Query: 734 SRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKP 793
R D+E L Y L++ N GSLPW Q K +++ + K +T + G P
Sbjct: 194 RRD-DLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERISEKKMSTPIEVLCKGYP 247
Query: 794 IKKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
+ F + S +F+ PDY L+QLF + G D
Sbjct: 248 SE--------------FSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 19 LRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
L+ VL LA + +EYIH ++H D+KP N L+G+ +V I+DFGLA +Y+D
Sbjct: 104 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
Query: 76 NHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ- 134
+ E K+ GT Y S+ H G + + R D+E L Y L++ N GSLPW +
Sbjct: 164 HQHIPYRENKNL-TGTARYASINTHLGIEQSRRD-DLESLGYVLMYFNLGSLPWQGLKAA 221
Query: 135 -QPEKVLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVK 193
+ +K + E+ + P + Y P F + S +F+ PDY L+Q+F
Sbjct: 222 TKRQKYERISEKKMSTPIEVLCKGY----PSEFSTYLNFCRSLRFDDKPDYSYLRQLFRN 277
Query: 194 ALQKNGLKMD 203
+ G D
Sbjct: 278 LFHRQGFSYD 287
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 80/353 (22%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ +GSG FGE+Y T+ + +V +K+E V+ P+ L
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEV-----AIKLEN------------VKTKHPQLLY 51
Query: 559 AWKKEKKLKT-LGLPT--FYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLKN 614
K + L+ G+P ++ ++G Y +++ G L+ L + ++ SLK
Sbjct: 52 ESKIYRILQGGTGIPNVRWFGVEGD-------YNVLVMDLLGPSLEDLFNFCSRKLSLKT 104
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 674
L + +++ +E++H ++H D+KP N L+G+ V I+DFGLA +Y+DT +
Sbjct: 105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
Query: 675 AHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTTS 734
E K+ T Y S+ H G + S
Sbjct: 165 IPYRENKN--------------------------------LTGTARYASVNTHLGIE-QS 191
Query: 735 RICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKPI 794
R D+E L Y L++ GSLPW Q K K++ K K T + G P
Sbjct: 192 RRDDLESLGYVLMYFLRGSLPW-----QGLKAGTKKQKYEKISEKKVATSIEALCRGYPT 246
Query: 795 KKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
+ F F Y S +F+ PDY LK+LF + G + D
Sbjct: 247 E--------------FASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFD 285
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 14 TQNVWLRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++ + L+ VL LA ++ +E++H ++H D+KP N L+G+ V I+DFGLA +Y
Sbjct: 97 SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
Query: 71 KDTDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+DT + E K+ GT Y S+ H G + SR D+E L Y L++ GSLPW
Sbjct: 157 RDTSTHQHIPYRENKNL-TGTARYASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 214
Query: 131 A---------YEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVA 181
YE+ EK +A E L P F F Y S +F+
Sbjct: 215 GLKAGTKKQKYEKISEKKVATSIEAL-----------CRGYPTEFASYFHYCRSLRFDDK 263
Query: 182 PDYDKLKQMFVKALQKNGLKMD 203
PDY LK++F + G + D
Sbjct: 264 PDYSYLKRLFRDLFIREGFQFD 285
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 78/347 (22%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+KVG+ +G G FG ++ T+ +N+ +V +K E R P+ +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQV-----AIKFEPR------------RSDAPQLRD 54
Query: 559 AWKKEKKLK-TLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLKNTL 616
++ K L G+P Y + HN ++I G L+ LLD ++FS+K
Sbjct: 55 EYRTYKLLAGCTGIPNVYYFGQEGLHN-----VLVIDLLGPSLEDLLDLCGRKFSVKTVA 109
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHK 674
+L ++ IH V+ D+KP N L+G +S+ ++ +VDFG+ Y+D
Sbjct: 110 MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 169
Query: 675 AHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTTS 734
EKK+ + +Y++I+T H G + S
Sbjct: 170 IPYREKKN------------------------LSGTARYMSINT--------HLG-REQS 196
Query: 735 RICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKPI 794
R D+E L + ++ GSLPW Q K K++ + K +T +E G P
Sbjct: 197 RRDDLEALGHVFMYFLRGSLPW-----QGLKAATNKQKYERIGEKKQSTPLRELCAGFPE 251
Query: 795 KKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQK 841
+ F + Y + F+ PDYD L+ LF K L++
Sbjct: 252 E--------------FYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQA--IVNIVDFGLASRYKDTDDNHKAHIVEK 84
L ++ IH V+ D+KP N L+G +S+ ++ +VDFG+ Y+D EK
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREK 175
Query: 85 KSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKE 144
K+ +GT Y S+ H G + SR D+E L + ++ GSLPW Q K K+
Sbjct: 176 KNL-SGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPW-----QGLKAATNKQ 228
Query: 145 ELLKDPAKFFTTHYKE---PVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQK 197
+ + K +T +E P+ F + Y + F+ PDYD L+ +F K L++
Sbjct: 229 KYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 78/347 (22%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+KVG+ +G G FG ++ T+ +N+ +V +K E R P+ +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQV-----AIKFEPR------------RSDAPQLRD 53
Query: 559 AWKKEKKLK-TLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLKNTL 616
++ K L G+P Y + HN ++I G L+ LLD ++FS+K
Sbjct: 54 EYRTYKLLAGCTGIPNVYYFGQEGLHN-----VLVIDLLGPSLEDLLDLCGRKFSVKTVA 108
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHK 674
+L ++ IH V+ D+KP N L+G +S+ ++ +VDFG+ Y+D
Sbjct: 109 MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 168
Query: 675 AHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTTS 734
EKK+ + +Y++I+T H G + S
Sbjct: 169 IPYREKKN------------------------LSGTARYMSINT--------HLG-REQS 195
Query: 735 RICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPGKPI 794
R D+E L + ++ GSLPW Q K K++ + K +T +E G P
Sbjct: 196 RRDDLEALGHVFMYFLRGSLPW-----QGLKAATNKQKYERIGEKKQSTPLRELCAGFPE 250
Query: 795 KKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQK 841
+ F + Y + F+ PDYD L+ LF K L++
Sbjct: 251 E--------------FYKYMHYARNLAFDATPDYDYLQGLFSKVLER 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQA--IVNIVDFGLASRYKDTDDNHKAHIVEK 84
L ++ IH V+ D+KP N L+G +S+ ++ +VDFG+ Y+D EK
Sbjct: 115 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREK 174
Query: 85 KSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKE 144
K+ +GT Y S+ H G + SR D+E L + ++ GSLPW Q K K+
Sbjct: 175 KNL-SGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPW-----QGLKAATNKQ 227
Query: 145 ELLKDPAKFFTTHYKE---PVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQK 197
+ + K +T +E P+ F + Y + F+ PDYD L+ +F K L++
Sbjct: 228 KYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 283
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 149/369 (40%), Gaps = 89/369 (24%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE--YSTGP-LFVEQNFYVRCAKP 554
+++VGK +G G FGE+ + + V +K+E S P L +E FY +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYV-----AIKLEPMKSRAPQLHLEYRFYKQLGSG 64
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ G+P Y ++N +++ G L+ L D + FSLK
Sbjct: 65 D--------------GIPQVYYFGPCGKYNA-----MVLELLGPSLEDLFDLCDRTFSLK 105
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDTDD 671
L I L+ +EY+H ++ D+KP N L+G + +Q +++I+DFGLA Y D +
Sbjct: 106 TVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPET 165
Query: 672 NHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAK 731
E KS + +Y++I+T H G K
Sbjct: 166 KKHIPYREHKS------------------------LTGTARYMSINT--------HLG-K 192
Query: 732 TTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPG 791
SR D+E L + ++ GSLPW Q K +KE K K P
Sbjct: 193 EQSRRDDLEALGHMFMYFLRGSLPW-----QGLKADTLKERYQK------IGDTKRATPI 241
Query: 792 KPIKKGIFDCVNHLNAYVFVEM---FKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMDG 848
+ + C N F EM +Y+ F PDYD L++LF + G D
Sbjct: 242 EVL------CEN------FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDY 289
Query: 849 KLNFEEKKV 857
+ ++ K++
Sbjct: 290 EYDWIGKQL 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 19 LRWVLRLALD---SLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDT 73
L+ VL +A+ +EY+H ++ D+KP N L+G + +Q +++I+DFGLA Y D
Sbjct: 104 LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDP 163
Query: 74 DDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ E KS GT Y S+ H G K SR D+E L + ++ GSLPW
Sbjct: 164 ETKKHIPYREHKSL-TGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQ--- 218
Query: 134 QQPEKVLAMKEELLKDP-AKFFTTHYKEPVPDVFVEMF-------KYIASTKFEVAPDYD 185
+K + LK+ K T P+ +V E F +Y+ F PDYD
Sbjct: 219 -------GLKADTLKERYQKIGDTKRATPI-EVLCENFPEMATYLRYVRRLDFFEKPDYD 270
Query: 186 KLKQMFVKALQKNGLKMDGKLNFEEKKI 213
L+++F + G D + ++ K++
Sbjct: 271 YLRKLFTDLFDRKGYMFDYEYDWIGKQL 298
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 148/370 (40%), Gaps = 82/370 (22%)
Query: 494 SAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE--YSTGP-LFVEQNFYVR 550
S +++VGK +G G FGE+ + + V +K+E S P L +E FY +
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYV-----AIKLEPIKSRAPQLHLEYRFYKQ 55
Query: 551 CAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKE 609
+ E G+P Y ++N +++ G L+ L D +
Sbjct: 56 LSATE--------------GVPQVYYFGPXGKYNA-----MVLELLGPSLEDLFDLCDRT 96
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSS--QAIVNIVDFGLASRYK 667
F+LK L I L+ +EY+H ++ D+KP N L+G + Q ++I+DFGLA Y
Sbjct: 97 FTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYI 156
Query: 668 DTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAH 727
D + E KS + +Y++I+T H
Sbjct: 157 DPETKKHIPYREHKS------------------------LTGTARYMSINT--------H 184
Query: 728 RGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKE 787
G K SR D+E L + ++ GSLPW Q K +KE K +
Sbjct: 185 LG-KEQSRRDDLEALGHMFMYFLRGSLPW-----QGLKADTLKERYQK---------IGD 229
Query: 788 PVPGKPIKKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
PI+ + + Y+ +Y+ F PDYD L++LF ++G D
Sbjct: 230 TKRATPIEVLCENFPEEMATYL-----RYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFD 284
Query: 848 GKLNFEEKKV 857
+ ++ K +
Sbjct: 285 YEYDWAGKPL 294
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 19 LRWVLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSS--QAIVNIVDFGLASRYKDT 73
L+ VL +A+ +EY+H ++ D+KP N L+G + Q ++I+DFGLA Y D
Sbjct: 99 LKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 158
Query: 74 DDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ E KS GT Y S+ H G K SR D+E L + ++ GSLPW +
Sbjct: 159 ETKKHIPYREHKSL-TGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQGLK 216
Query: 134 QQP--EKVLAMKEELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMF 191
E+ + + P + E P+ +Y+ F PDYD L+++F
Sbjct: 217 ADTLKERYQKIGDTKRATPIEVLC----ENFPEEMATYLRYVRRLDFFEKPDYDYLRKLF 272
Query: 192 VKALQKNGLKMDGKLNFEEKKI 213
++G D + ++ K +
Sbjct: 273 TDLFDRSGFVFDYEYDWAGKPL 294
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 148/369 (40%), Gaps = 89/369 (24%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE--YSTGP-LFVEQNFYVRCAKP 554
+++VGK +G G FGE+ + + V +K+E S P L +E FY +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYV-----AIKLEPMKSRAPQLHLEYRFYKQLGSG 64
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ G+P Y ++N +++ G L+ L D + FSLK
Sbjct: 65 D--------------GIPQVYYFGPCGKYNA-----MVLELLGPSLEDLFDLCDRTFSLK 105
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDTDD 671
L I L+ +EY+H ++ D+KP N L+G + +Q +++I+DF LA Y D +
Sbjct: 106 TVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165
Query: 672 NHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAK 731
E KS + +Y++I+T H G K
Sbjct: 166 KKHIPYREHKS------------------------LTGTARYMSINT--------HLG-K 192
Query: 732 TTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPG 791
SR D+E L + ++ GSLPW Q K +KE K K P
Sbjct: 193 EQSRRDDLEALGHMFMYFLRGSLPW-----QGLKADTLKERYQK------IGDTKRATPI 241
Query: 792 KPIKKGIFDCVNHLNAYVFVEM---FKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMDG 848
+ + C N F EM +Y+ F PDYD L++LF + G D
Sbjct: 242 EVL------CEN------FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDY 289
Query: 849 KLNFEEKKV 857
+ ++ K++
Sbjct: 290 EYDWIGKQL 298
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 19 LRWVLRLALD---SLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDT 73
L+ VL +A+ +EY+H ++ D+KP N L+G + +Q +++I+DF LA Y D
Sbjct: 104 LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163
Query: 74 DDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ E KS GT Y S+ H G K SR D+E L + ++ GSLPW
Sbjct: 164 ETKKHIPYREHKSL-TGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQ--- 218
Query: 134 QQPEKVLAMKEELLKDP-AKFFTTHYKEPVPDVFVEMF-------KYIASTKFEVAPDYD 185
+K + LK+ K T P+ +V E F +Y+ F PDYD
Sbjct: 219 -------GLKADTLKERYQKIGDTKRATPI-EVLCENFPEMATYLRYVRRLDFFEKPDYD 270
Query: 186 KLKQMFVKALQKNGLKMDGKLNFEEKKI 213
L+++F + G D + ++ K++
Sbjct: 271 YLRKLFTDLFDRKGYMFDYEYDWIGKQL 298
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 148/369 (40%), Gaps = 89/369 (24%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE--YSTGP-LFVEQNFYVRCAKP 554
+++VGK +G G FGE+ + + V +K+E S P L +E FY +
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYV-----AIKLEPMKSRAPQLHLEYRFYKQLGSG 85
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
+ G+P Y ++N +++ G L+ L D + FSLK
Sbjct: 86 D--------------GIPQVYYFGPCGKYNA-----MVLELLGPSLEDLFDLCDRTFSLK 126
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDTDD 671
L I L+ +EY+H ++ D+KP N L+G + +Q +++I+DF LA Y D +
Sbjct: 127 TVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 186
Query: 672 NHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAK 731
E KS + +Y++I+T H G K
Sbjct: 187 KKHIPYREHKS------------------------LTGTARYMSINT--------HLG-K 213
Query: 732 TTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPG 791
SR D+E L + ++ GSLPW Q K +KE K K P
Sbjct: 214 EQSRRDDLEALGHMFMYFLRGSLPW-----QGLKADTLKERYQK------IGDTKRATPI 262
Query: 792 KPIKKGIFDCVNHLNAYVFVEM---FKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMDG 848
+ + C N F EM +Y+ F PDYD L++LF + G D
Sbjct: 263 EVL------CEN------FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDY 310
Query: 849 KLNFEEKKV 857
+ ++ K++
Sbjct: 311 EYDWIGKQL 319
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 19 LRWVLRLALD---SLEYIHHCGYVHADLKPANVLLGV--DSSQAIVNIVDFGLASRYKDT 73
L+ VL +A+ +EY+H ++ D+KP N L+G + +Q +++I+DF LA Y D
Sbjct: 125 LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 184
Query: 74 DDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ E KS GT Y S+ H G K SR D+E L + ++ GSLPW
Sbjct: 185 ETKKHIPYREHKSL-TGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQ--- 239
Query: 134 QQPEKVLAMKEELLKDP-AKFFTTHYKEPVPDVFVEMF-------KYIASTKFEVAPDYD 185
+K + LK+ K T P+ +V E F +Y+ F PDYD
Sbjct: 240 -------GLKADTLKERYQKIGDTKRATPI-EVLCENFPEMATYLRYVRRLDFFEKPDYD 291
Query: 186 KLKQMFVKALQKNGLKMDGKLNFEEKKI 213
L+++F + G D + ++ K++
Sbjct: 292 YLRKLFTDLFDRKGYMFDYEYDWIGKQL 319
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 139/356 (39%), Gaps = 81/356 (22%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE--YSTGP-LFVEQNFYVRCAKP 554
S +VGK +G G FGE+ + + V +K+E S P L +E FY +
Sbjct: 1 SMRVGKKIGCGNFGELRLGKNLYTNEYV-----AIKLEPIKSRAPQLHLEYRFYKQLGSA 55
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKEFSLK 613
GLP Y ++N +++ G L+ L D + F+LK
Sbjct: 56 GE-------------GLPQVYYFGPXGKYNA-----MVLELLGPSLEDLFDLCDRTFTLK 97
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSS--QAIVNIVDFGLASRYKDTDD 671
L I LL +EY+H ++ D+KP N L+G + + +++I+DFGLA Y D +
Sbjct: 98 TVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPET 157
Query: 672 NHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAK 731
E KS + +Y++I+T H G K
Sbjct: 158 KKHIPYREHKS------------------------LTGTARYMSINT--------HLG-K 184
Query: 732 TTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEELLKDPAKFFTTHYKEPVPG 791
SR D+E L + ++ GSLPW Q K +KE K +
Sbjct: 185 EQSRRDDLEALGHMFMYFLRGSLPW-----QGLKADTLKERYQK---------IGDTKRN 230
Query: 792 KPIKKGIFDCVNHLNAYVFVEMFKYIASTKFEVDPDYDKLKQLFVKALQKNGLKMD 847
PI+ + + Y+ +Y+ F PDY+ L+ LF +K G D
Sbjct: 231 TPIEALCENFPEEMATYL-----RYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFD 281
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 19 LRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSS--QAIVNIVDFGLASRYKDT 73
L+ VL +A L +EY+H ++ D+KP N L+G + + +++I+DFGLA Y D
Sbjct: 96 LKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDP 155
Query: 74 DDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ E KS GT Y S+ H G K SR D+E L + ++ GSLPW
Sbjct: 156 ETKKHIPYREHKSL-TGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQG-- 211
Query: 134 QQPEKVLAMKEELLKDP-AKFFTTHYKEPV-------PDVFVEMFKYIASTKFEVAPDYD 185
+K + LK+ K T P+ P+ +Y+ F PDY+
Sbjct: 212 --------LKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYE 263
Query: 186 KLKQMFVKALQKNGLKMD 203
L+ +F +K G D
Sbjct: 264 YLRTLFTDLFEKKGYTFD 281
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 493 DSAKKSWKVGKS------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
D K +W++ K+ +GSG +G V SA D + KV ++ + P F +
Sbjct: 32 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKV-------AIKKLSRP-FQSEI 83
Query: 547 FYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLD 605
F R + L K + +GL + N Y F ++ F +DLQK++
Sbjct: 84 FAKRAYR--ELLLLKHMQHENVIGLLDVFTPASSLR---NFYDFYLVMPFMQTDLQKIMG 138
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
EFS + + +L L+YIH G VH DLKP N+ + D + I+DFGLA R
Sbjct: 139 --MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE---LKILDFGLA-R 192
Query: 666 YKDTD 670
+ D +
Sbjct: 193 HADAE 197
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+++++ L L+YIH G VH DLKP N+ + D + I+DFGLA R+ D +
Sbjct: 146 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE---LKILDFGLA-RHADAE 197
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 487 PGAIFVDSAKKSWKVGK-----SLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
PG++ V +A + + + LG G +GEVY A D V + V + ++ E P
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFG-SDL 600
A ++ LK L +K HN +R +I ++ +DL
Sbjct: 79 ----------------TAIREVSLLKELQHRNIIELKSVIHHN---HRLHLIFEYAENDL 119
Query: 601 QKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV-DSSQA-IVNIV 658
+K +D++ + S++ + L++ + + H +H DLKP N+LL V D+S+ ++ I
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 659 DFGLASRY 666
DFGLA +
Sbjct: 180 DFGLARAF 187
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGV-DSSQA-IVNIVDFGLASRY 70
++ + + H +H DLKP N+LL V D+S+ ++ I DFGLA +
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 482 PDPIKPGAIFVDSAKKSWKVG------KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVE 535
P P + G + K +W+V + +GSG +G V SA D G K +K
Sbjct: 4 PPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRT-----GAKVAIKKL 58
Query: 536 YSTGPLFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISK 595
Y F + F R + L K + +GL + + + Y +++
Sbjct: 59 YRP---FQSELFAKRAYR--ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY--LVMPF 111
Query: 596 FGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIV 655
G+DL KL+ +H++ + +L L YIH G +H DLKP N+ + D +
Sbjct: 112 MGTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE---L 167
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 168 KILDFGLARQ 177
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
L L YIH G +H DLKP N+ + D + I+DFGLA +
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNLAVNEDCE---LKILDFGLARQ 177
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 496 KKSWKVGKSL------GSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
K W+V + L GSG +G V SA D KV V K+ L + Y
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVA----VKKLSRPFQSLIHARRTYR 76
Query: 550 RCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKL 603
+HL K +GL + E Y ++ + G+DL Q L
Sbjct: 77 ELRLLKHL------KHENVIGLLDVFTPATSIEDFSEVY--LVTTLMGADLNNIVKSQAL 128
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
DEH +F + LL L+YIH G +H DLKP+NV + DS + I+DFGLA
Sbjct: 129 SDEHVQFLVYQ-------LLRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLA 178
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L L+YIH G +H DLKP+NV + DS + I+DFGLA
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLA 178
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 496 KKSWKVGKSL------GSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
K W+V + L GSG +G V SA D KV V K+ L + Y
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVA----VKKLSRPFQSLIHARRTYR 76
Query: 550 RCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKL 603
+HL K +GL + E Y ++ + G+DL Q L
Sbjct: 77 ELRLLKHL------KHENVIGLLDVFTPATSIEDFSEVY--LVTTLMGADLNNIVKCQAL 128
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
DEH +F + LL L+YIH G +H DLKP+NV + DS + I+DFGLA
Sbjct: 129 SDEHVQFLVYQ-------LLRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLA 178
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L L+YIH G +H DLKP+NV + DS + I+DFGLA
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSE---LRILDFGLA 178
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 493 DSAKKSWKVGKS------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
D K +W++ K+ +GSG +G V SA D + KV ++ + P F +
Sbjct: 14 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKV-------AIKKLSRP-FQSEI 65
Query: 547 FYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLD 605
F R + L K + +GL + N Y F ++ F +DLQK++
Sbjct: 66 FAKRAYR--ELLLLKHMQHENVIGLLDVFTPASSLR---NFYDFYLVMPFMQTDLQKIMG 120
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+FS + + +L L+YIH G VH DLKP N+ + D + I+DFGLA R
Sbjct: 121 --LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE---LKILDFGLA-R 174
Query: 666 YKDTD 670
+ D +
Sbjct: 175 HADAE 179
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+++++ L L+YIH G VH DLKP N+ + D + I+DFGLA R+ D +
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE---LKILDFGLA-RHADAE 179
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 484 PIKPGAIFVDSAKKSWKVGKS------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYS 537
I PG ++V KK K+G+S LGSG +GEV + N + K + K ++
Sbjct: 20 AINPG-MYV--RKKEGKIGESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFD 75
Query: 538 TGPLFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF- 596
G + + N + + H E + + LK+L P + E + F ++++F
Sbjct: 76 KGR-YSDDN---KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE---DKKYFYLVTEFY 128
Query: 597 --GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
G +++++ HK F + I +L + Y+H VH D+KP N+LL +S
Sbjct: 129 EGGELFEQIINRHK-FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 655 VNIVDFGLASRY 666
+ IVDFGL+S +
Sbjct: 188 IKIVDFGLSSFF 199
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+++ L + Y+H VH D+KP N+LL +S + IVDFGL+S +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 496 KKSWKVGKSL------GSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
K W+V + L GSG +G V SA D KV V K+ L + Y
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVA----VKKLSRPFQSLIHARRTYR 68
Query: 550 RCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKL 603
+HL K +GL + E Y ++ + G+DL Q L
Sbjct: 69 ELRLLKHL------KHENVIGLLDVFTPATSIEDFSEVY--LVTTLMGADLNNIVKCQAL 120
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
DEH +F + LL L+YIH G +H DLKP+NV + D + I+DFGLA
Sbjct: 121 SDEHVQF-------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE---LRILDFGLA 170
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L L+YIH G +H DLKP+NV + D + I+DFGLA
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCE---LRILDFGLA 170
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L+ LEY+H G +H D+K N+LLG D S V I DFG+++ D + +
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKV 182
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
+ GT + + + DI + L TG+ P+ Y P KVL
Sbjct: 183 ---RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--PMKVLM 237
Query: 142 MKEELLKDPAKFFT 155
+ L DP T
Sbjct: 238 LT--LQNDPPSLET 249
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 606 EHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
EHK L + TI +L+ LEY+H G +H D+K N+LLG D S V I DFG++
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVS 168
Query: 664 S 664
+
Sbjct: 169 A 169
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ + + L A++ E
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL----REIKILLAFRHEN 84
Query: 565 KL---KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ + PT MK +I+ +DL KLL + + S +
Sbjct: 85 IIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYFLYQ 134
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVE 679
+L L+YIH +H DLKP+N+LL S + I DFGLA R D D +H + E
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLA-RVADPDHDHTGFLTE 188
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL S +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LK 166
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 167 ICDFGLA-RVADPDHDHTGFLTE 188
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 82/200 (41%), Gaps = 56/200 (28%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG GG G V+SA D+ D +V K V+ T P V+ A ++
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVL-----TDPQSVKH-------------ALRE 58
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK------------LLDEHKEF 610
K ++ L +H+ F I+ GS L ++ E+ E
Sbjct: 59 IKIIRRL------------DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET 106
Query: 611 SLKNTLTIGS-----------SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
L N L G LL L+YIH +H DLKPAN+ +++ ++ I D
Sbjct: 107 DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF--INTEDLVLKIGD 164
Query: 660 FGLASRYKDTDDNHKAHIVE 679
FGLA R D +HK H+ E
Sbjct: 165 FGLA-RIMDPHYSHKGHLSE 183
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R + L L+YIH +H DLKPAN+ +++ ++ I DFGLA R D +HK
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLF--INTEDLVLKIGDFGLA-RIMDPHYSHKG 179
Query: 80 HIVE 83
H+ E
Sbjct: 180 HLSE 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L+ LEY+H G +H D+K N+LLG D S V I DFG+++ D + +
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKV 177
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
+ GT + + + DI + L TG+ P+ Y P KVL
Sbjct: 178 ---RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--PMKVLM 232
Query: 142 MKEELLKDPAKFFT 155
+ L DP T
Sbjct: 233 LT--LQNDPPSLET 244
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 606 EHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
EHK L + TI +L+ LEY+H G +H D+K N+LLG D S V I DFG++
Sbjct: 107 EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVS 163
Query: 664 S 664
+
Sbjct: 164 A 164
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
+I++ SDL+KL + ++ TI +LL ++IH G +H DLKPAN LL D
Sbjct: 108 YIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQD 167
Query: 650 SSQAIVNIVDFGLASRYKDTDDNH 673
S V I DFGLA D H
Sbjct: 168 CS---VKICDFGLARTINSDKDIH 188
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 31 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
++IH G +H DLKPAN LL D S V I DFGLA D H
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCS---VKICDFGLARTINSDKDIH 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 99
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +++ G+DL KLL + + S +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDV---------YLVTHLMGADLYKLL-KTQHLSNDHICYF 149
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA-RVADPDHDHTGFLT 205
Query: 679 E 679
E
Sbjct: 206 E 206
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 128 MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 184
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 185 ICDFGLA-RVADPDHDHTGFLTE 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
++ +++ +++L Y H VH DLKP N+L S + + I+DFGLA +K D H
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEH 182
Query: 78 KAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
+ GT +Y + + + + CDI + L TG LP+T
Sbjct: 183 STNAA-------GTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKV---EYSTGPLFVEQNFYVRCAKPEHLEA 559
+ LGSG FG+V+ + + + G + V+K + S P+ E +EA
Sbjct: 28 RKLGSGAFGDVH-----LVEERSSGLERVIKTINKDRSQVPM-------------EQIEA 69
Query: 560 WKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH---KEFSLKNTL 616
+ + LK+L P + E N Y + + G L++++ K S
Sbjct: 70 --EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ ++++L Y H VH DLKP N+L S + + I+DFGLA +K D H +
Sbjct: 128 ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTN 185
Query: 677 IVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAA 710
G + ++F + V F C A
Sbjct: 186 AA-------GTALYMAPEVFKRDVTFKCDIWSAG 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ + + L A++ E
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL----REIKILLAFRHEN 84
Query: 565 KL---KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ + PT MK +I+ +DL KLL + + S +
Sbjct: 85 IIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYFLYQ 134
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVE 679
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H + E
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLTE 188
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 166
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 167 ICDFGLA-RVADPDHDHTGFLTE 188
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AIF D +K + LG G FGEV D K+ G + +KV V+Q
Sbjct: 28 AIFSDR----YKGQRVLGKGSFGEVILCKD-----KITGQECAVKV---ISKRQVKQ--- 72
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEH 607
K + ++ + LK L P MK + Y +++ + G +L +
Sbjct: 73 ----KTDKESLLREVQLLKQLDHPNI--MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 126
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
K FS + I +L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++R L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AIF D +K + LG G FGEV D K+ G + +KV V+Q
Sbjct: 22 AIFSDR----YKGQRVLGKGSFGEVILCKD-----KITGQECAVKV---ISKRQVKQ--- 66
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEH 607
K + ++ + LK L P MK + Y +++ + G +L +
Sbjct: 67 ----KTDKESLLREVQLLKQLDHPNI--MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
K FS + I +L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++R L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE-FSL 612
E ++ +K+E + +K+L P + E N + Y + + G ++++ HK F
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVV--HKRVFRE 105
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ I +L ++ Y H H DLKP N L DS + + ++DFGLA+R+K
Sbjct: 106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+++ L ++ Y H H DLKP N L DS + + ++DFGLA+R+K
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE-FSL 612
E ++ +K+E + +K+L P + E N + Y + + G ++++ HK F
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVV--HKRVFRE 122
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ I +L ++ Y H H DLKP N L DS + + ++DFGLA+R+K
Sbjct: 123 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+++ L ++ Y H H DLKP N L DS + + ++DFGLA+R+K
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYST----GPLFVEQNFYVRCAKPEHLE 558
K LGSG +GEV D + + K + K +T G L E
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAV----------- 74
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
LK L P + E N Y + + + G +++ K FS + I
Sbjct: 75 -------LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVI 126
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+L Y+H VH DLKP N+LL S A++ IVDFGL++ ++
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE 175
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+++ L Y+H VH DLKP N+LL S A++ IVDFGL++ ++
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE 175
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S ++ K LG+G FGEV+ T + N KV T PE
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWNGNT----------KVAIKT--------LKPGTMSPE 49
Query: 556 H-LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLLD-EHKEF 610
LE + KKLK L YA+ ++ I++++ GS L L D E +
Sbjct: 50 SFLEEAQIMKKLKHDKLVQLYAVVSEEP-------IYIVTEYMNKGSLLDFLKDGEGRAL 102
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L N + + + + + YI Y+H DL+ AN+L+G + I I DFGLA +D +
Sbjct: 103 KLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---NGLICKIADFGLARLIEDNE 159
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ YI Y+H DL+ AN+L+G + I I DFGLA +D +
Sbjct: 117 GMAYIERMNYIHRDLRSANILVG---NGLICKIADFGLARLIEDNE 159
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + D++ K V++ + + P +FY+R +
Sbjct: 14 YELGEILGFGGMSEVHLARD-LRDHRDVAVK-VLRADLARDP-----SFYLRFRR----- 61
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 62 ---EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+L+ S+ V +VDFG+A D+ ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNS 172
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+L+ S+ V +VDFG+A D+ ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNS----- 172
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 38/176 (21%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKV--------EYSTGPLFVEQNFYVRCAKP 554
K LGSG +GEV D K+ G + +K+ ++G L E
Sbjct: 10 KKLGSGAYGEVLLCKD-----KLTGAERAIKIIKKSSVTTTSNSGALLDEVAV------- 57
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE---HKEFS 611
LK L P + E N Y + + + G +L DE ++FS
Sbjct: 58 -----------LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFDEIILRQKFS 102
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ I +L Y+H VH DLKP N+LL S A++ IVDFGL++ ++
Sbjct: 103 EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE 158
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+++ L Y+H VH DLKP N+LL S A++ IVDFGL++ ++
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE 158
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AIF D +K + LG G FGEV D K+ G + +KV V+Q
Sbjct: 45 AIFSDR----YKGQRVLGKGSFGEVILCKD-----KITGQECAVKV---ISKRQVKQ--- 89
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEH 607
K + ++ + LK L P MK + Y +++ + G +L +
Sbjct: 90 ----KTDKESLLREVQLLKQLDHPNI--MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 143
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
K FS + I +L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++R L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AIF D +K + LG G FGEV D K+ G + +KV V+Q
Sbjct: 46 AIFSDR----YKGQRVLGKGSFGEVILCKD-----KITGQECAVKV---ISKRQVKQ--- 90
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEH 607
K + ++ + LK L P MK + Y +++ + G +L +
Sbjct: 91 ----KTDKESLLREVQLLKQLDHPNI--MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 144
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
K FS + I +L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++R L + Y+H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ +G+ LG G FG VY A + N K++M ++ LF Q + EH
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQN-------KFIMALKV----LFKSQ---LEKEGVEH-- 60
Query: 559 AWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
++E ++++ L P M Y + + G +L K L +H F + + T
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG-ELYKELQKHGRFDEQRSAT 119
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 162
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 162
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Query: 491 FVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVR 550
F D K K+ K +G G FGEV+ A KV K +M+ E P+ + +
Sbjct: 13 FCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI- 70
Query: 551 CAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKE 609
L+ K E + L K + +++ DL LL +
Sbjct: 71 ------LQLLKHEN---VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
F+L + LL+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++ V+++ L+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+K+ LG GG VY A D ++ ++ + +F+ K E L+
Sbjct: 13 YKIVDKLGGGGMSTVYLAED-----------TILNIKVAIKAIFIPPR-----EKEETLK 56
Query: 559 AWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+++E L +M E + + Y ++ G L + ++ H S+ +
Sbjct: 57 RFEREVHNSSQLSHQNIVSMIDVDEED-DCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+ +LD +++ H VH D+KP N+L +DS++ + I DFG+A +T H+
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNIL--IDSNKTL-KIFDFGIAKALSETSLTQTNHV 172
Query: 678 V 678
+
Sbjct: 173 L 173
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
LD +++ H VH D+KP N+L +DS++ + I DFG+A +T H++
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNIL--IDSNKTL-KIFDFGIAKALSETSLTQTNHVL---- 173
Query: 87 AHNGTLIYTSLVAHRGAKT--TSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKE 144
GT+ Y S +G T + I I I+ Y +L G P+ E +++
Sbjct: 174 ---GTVQYFSPEQAKGEATDECTDIYSIGIVLYEML---VGEPPFNG-----ETAVSIAI 222
Query: 145 ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQM 190
+ ++D TT ++ +P + + +T+ + A Y +++M
Sbjct: 223 KHIQDSVPNVTTDVRKDIPQSLSNVI--LRATEKDKANRYKTIQEM 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG G FG+VY A NK G KV + E LE
Sbjct: 13 WEIVGELGDGAFGKVYKAK-----NKETGALAAAKV--------------IETKSEEELE 53
Query: 559 AWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+ E + L T P + G H+G + I G+ +L+ + +
Sbjct: 54 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ +L++L ++H +H DLK NVL+ ++ + + DFG++++
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAK 158
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L++L ++H +H DLK NVL+ ++ + + DFG++++
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAK 158
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
+I++ SDL+KL + ++ TI +LL +IH G +H DLKPAN LL D
Sbjct: 106 YIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD 165
Query: 650 SSQAIVNIVDFGLA---SRYKDTDDNHKAHIVEKKSAHN 685
S V + DFGLA + KDT+ + E+ HN
Sbjct: 166 CS---VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA---SRYKDTDDNHKAHIVEKKSAH 88
+IH G +H DLKPAN LL D S V + DFGLA + KDT+ + E+ H
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCS---VKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 89 NGTL 92
N L
Sbjct: 201 NKNL 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG G FG+VY A NK G KV + E LE
Sbjct: 21 WEIVGELGDGAFGKVYKAK-----NKETGALAAAKV--------------IETKSEEELE 61
Query: 559 AWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+ E + L T P + G H+G + I G+ +L+ + +
Sbjct: 62 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ +L++L ++H +H DLK NVL+ ++ + + DFG++++
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAK 166
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L++L ++H +H DLK NVL+ ++ + + DFG++++
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAK 166
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 491 FVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVR 550
F D K K+ K +G G FGEV+ A KV K +M+ E P+ + +
Sbjct: 13 FCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI- 70
Query: 551 CAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKE 609
L+ K E + L K + + +++ DL LL +
Sbjct: 71 ------LQLLKHEN---VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK 121
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
F+L + LL+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
V+++ L+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ +G+ LG G FG VY A + N K++M ++ LF Q + EH
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQN-------KFIMALKV----LFKSQ---LEKEGVEH-- 59
Query: 559 AWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
++E ++++ L P M Y + + G +L K L +H F + + T
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG-ELYKELQKHGRFDEQRSAT 118
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 161
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 161
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Query: 491 FVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVR 550
F D K K+ K +G G FGEV+ A KV K +M+ E P+ + +
Sbjct: 12 FCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI- 69
Query: 551 CAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKE 609
L+ K E + L K + +++ DL LL +
Sbjct: 70 ------LQLLKHEN---VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 120
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
F+L + LL+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 174
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
V+++ L+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 174
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 486 KPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQ 545
+P I D + + + LG+G FG V+ T E +TG F +
Sbjct: 40 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVT-----------------ERATGNNFAAK 82
Query: 546 NFYVRCAKPEHLEAWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQ 601
+V E +KE + + L PT + E + ++I +F G +
Sbjct: 83 --FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN---EMVMIYEFMSGGELFE 137
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K+ DEH + S + + L ++H YVH DLKP N++ S + ++DFG
Sbjct: 138 KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFG 196
Query: 662 LAS 664
L +
Sbjct: 197 LTA 199
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
+R L ++H YVH DLKP N++ S + ++DFGL +
Sbjct: 155 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTA 199
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVA----VKKLSRPFQSIIHAKRTY------RELRLLKHMK 75
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 76 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 129
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 130 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 179
Query: 678 VEK 680
+
Sbjct: 180 ATR 182
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 182
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 85
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 86 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 139
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + DS + I+DFGLA + TDD ++
Sbjct: 140 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLA---RHTDDEMTGYV 189
Query: 678 VEK 680
+
Sbjct: 190 ATR 192
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + DS + I+DFGLA + TDD ++ +
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLA---RHTDDEMTGYVATR 192
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 79
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 185
Query: 679 E 679
E
Sbjct: 186 E 186
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 164
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 165 ICDFGLA-RVADPDHDHTGFLTE 186
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ V + +G GGFGEVY K D TG ++ ++C + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC------RKAD-----------TGKMYA-----MKCLDKKRIK 228
Query: 559 AWKKEK---------KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE 609
+ E L + G F H + FI+ G DL L +H
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
FS + + ++ LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 304 GLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ V + +G GGFGEVY K D TG ++ ++C + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC------RKAD-----------TGKMYA-----MKCLDKKRIK 228
Query: 559 AWKKEK---------KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE 609
+ E L + G F H + FI+ G DL L +H
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
FS + + ++ LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 304 GLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 81
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 82 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 135
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + DS + I+DFGLA + TDD ++
Sbjct: 136 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLA---RHTDDEMTGYV 185
Query: 678 VEK 680
+
Sbjct: 186 ATR 188
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + DS + I+DFGLA + TDD ++ +
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLA---RHTDDEMTGYVATR 188
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 89
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 90 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 143
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 144 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 193
Query: 678 VEK 680
+
Sbjct: 194 ATR 196
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 196
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ V + +G GGFGEVY K D TG ++ ++C + ++
Sbjct: 190 FSVHRIIGRGGFGEVYGC------RKAD-----------TGKMYA-----MKCLDKKRIK 227
Query: 559 AWKKEK---------KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE 609
+ E L + G F H + FI+ G DL L +H
Sbjct: 228 MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 287
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
FS + + ++ LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 341
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 303 GLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 341
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV K + K +++ G
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISKRKFAIGS-------- 52
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 53 AREADP-ALNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 109
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV K + K +++ G
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISKRKFAIGS-------- 52
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 53 AREADP-ALNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 109
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ V + +G GGFGEVY K D TG ++ ++C + ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC------RKAD-----------TGKMYA-----MKCLDKKRIK 228
Query: 559 AWKKEK---------KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE 609
+ E L + G F H + FI+ G DL L +H
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
FS + + ++ LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
LE++H+ V+ DLKPAN+LL V I D GLA +
Sbjct: 304 GLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF 342
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV K + K +++ G
Sbjct: 2 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISKRKFAIGS-------- 52
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 53 AREADP-ALNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 109
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV K + K +++ G
Sbjct: 1 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISKRKFAIGS-------- 51
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 52 AREADP-ALNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 108
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 109 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 81
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 131
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 187
Query: 679 E 679
E
Sbjct: 188 E 188
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 166
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 167 ICDFGLA-RVADPDHDHTGFLTE 188
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 99
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 100 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 153
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 154 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 203
Query: 678 VEK 680
+
Sbjct: 204 ATR 206
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 206
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 98
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 99 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 152
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 153 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 202
Query: 678 VEK 680
+
Sbjct: 203 ATR 205
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Query: 491 FVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVR 550
F D K K+ K +G G FGEV+ A KV K +M+ E P+ + +
Sbjct: 13 FCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI- 70
Query: 551 CAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDE-HKE 609
L+ K E + L K + +++ DL LL +
Sbjct: 71 ------LQLLKHEN---VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
F+L + LL+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
V+++ L+ L YIH +H D+K ANVL+ D ++ + DFGLA +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAF 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 99
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 149
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 205
Query: 679 E 679
E
Sbjct: 206 E 206
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 128 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 184
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 185 ICDFGLA-RVADPDHDHTGFLTE 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 71
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 72 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 129 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 181
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 181
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 87
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 88 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 137
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 193
Query: 679 E 679
E
Sbjct: 194 E 194
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 116 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 172
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 173 ICDFGLA-RVADPDHDHTGFLTE 194
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D+VN +V K + E+ T + ++ ++ + +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 79
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 185
Query: 679 E 679
E
Sbjct: 186 E 186
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 164
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 165 ICDFGLA-RVADPDHDHTGFLTE 186
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 22/180 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AIF D +K + LG G FGEV D K+ G + +KV V+Q
Sbjct: 22 AIFSDR----YKGQRVLGKGSFGEVILCKD-----KITGQECAVKV---ISKRQVKQ--- 66
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEH 607
K + ++ + LK L P + E G Y +++ + G +L +
Sbjct: 67 ----KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISR 120
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
K FS + I +L + Y H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++R L + Y H VH DLKP N+LL S A + I+DFGL++ ++
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 71
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 72 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 129 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 181
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 181
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 62
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 63 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 120 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 172
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 136 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 172
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 48
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQK 602
+ A EH ++E ++++ L P + G Y + + G+ +LQK
Sbjct: 49 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG
Sbjct: 105 L----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGW 157
Query: 663 A 663
+
Sbjct: 158 S 158
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP-EHLEAWKKE 563
+G G +G V SA D+VN +V K + E+ T C + ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT-----------YCQRTLREIKILLRF 78
Query: 564 KKLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+ +G+ PT MK +I+ +DL KLL + + S +
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICY 128
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA-RVADPDHDHTGFL 184
Query: 678 VE 679
E
Sbjct: 185 TE 186
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 164
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 165 ICDFGLA-RVADPDHDHTGFLTE 186
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV K + K +++ G
Sbjct: 8 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISKRKFAIGS-------- 58
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 59 AREADPA-LNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 115
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 116 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP-EHLEAWKKE 563
+G G +G V SA D+VN +V K + E+ T C + ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT-----------YCQRTLREIKILLRF 78
Query: 564 KKLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+ +G+ PT MK +I+ +DL KLL + + S +
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICY 128
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA-RVADPDHDHTGFL 184
Query: 678 VE 679
E
Sbjct: 185 TE 186
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 164
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 165 ICDFGLA-RVADPDHDHTGFLTE 186
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 34 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 78
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK 179
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK 179
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 36/264 (13%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK-------DTDDNHKA 675
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K T +
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 676 HIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTTSR 735
I+ K + +L L + A + + P IY +V+ + +
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIVSGKVRFPSHF 261
Query: 736 ICDIEILAYNLLHLNT----GSLP 755
D++ L NLL ++ G+LP
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLP 285
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 48
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQK 602
+ A EH ++E ++++ L P + G Y + + G+ +LQK
Sbjct: 49 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG
Sbjct: 105 L----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGW 157
Query: 663 A 663
+
Sbjct: 158 S 158
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 48
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQK 602
+ A EH ++E ++++ L P + G Y + + G+ +LQK
Sbjct: 49 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG
Sbjct: 105 L----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGW 157
Query: 663 A 663
+
Sbjct: 158 S 158
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 32/255 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK-------DTDDNHKA 675
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K T +
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 676 HIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKTTSR 735
I+ K + +L L Q A + + P IY +V+ + +
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP------IQIYEKIVSGKVRFPSHF 261
Query: 736 ICDIEILAYNLLHLN 750
D++ L NLL ++
Sbjct: 262 SSDLKDLLRNLLQVD 276
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 85
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 86 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 139
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 140 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 189
Query: 678 VEK 680
+
Sbjct: 190 ATR 192
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++++ L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMT 186
Query: 79 AHIVEK 84
++ +
Sbjct: 187 GYVATR 192
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 50
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQK 602
+ A EH ++E ++++ L P + G Y + + G+ +LQK
Sbjct: 51 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 106
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG
Sbjct: 107 L----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGW 159
Query: 663 A 663
+
Sbjct: 160 S 160
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 495 AKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
AK+ W ++G+ LG G FG VY A + N + K + K + +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREK-NSKFILALKVLFKAQ-------------L 46
Query: 550 RCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLD 605
A EH ++E ++++ L P + G + Y + + G+ +LQKL
Sbjct: 47 EKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL-- 102
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 103 --SKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
++L Y H +H D+KP N+LLG S + I DFG + + +++A
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS----------RRAA 165
Query: 88 HNGTLIYT--SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
GTL Y ++ R + + +L Y L G P+ A
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL---VGKPPFEA 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 486 KPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQ 545
+P I D + + + LG+G FG V+ T E +TG F +
Sbjct: 146 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVT-----------------ERATGNNFAAK 188
Query: 546 NFYVRCAKPEHLEAWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQ 601
+V E +KE + + L PT + E + ++I +F G +
Sbjct: 189 --FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN---EMVMIYEFMSGGELFE 243
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K+ DEH + S + + L ++H YVH DLKP N++ S + ++DFG
Sbjct: 244 KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFG 302
Query: 662 LAS 664
L +
Sbjct: 303 LTA 305
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
+R L ++H YVH DLKP N++ S + ++DFGL +
Sbjct: 261 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTA 305
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 39/199 (19%)
Query: 495 AKKSWKVGKS------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
AK W+V + +GSG +G V +A D ++V V K+ + + Y
Sbjct: 10 AKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY 65
Query: 549 VRCAKPEHLEAWKKEKKLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDLQ------ 601
L K K +GL F + +E N +++ G+DL
Sbjct: 66 ------RELRLLKHMKHENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCA 116
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
KL D+H +F + +L L+YIH +H DLKP+N+ + D + I+DFG
Sbjct: 117 KLTDDHVQFLIYQ-------ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFG 166
Query: 662 LASRYKDTDDNHKAHIVEK 680
LA + TDD ++ +
Sbjct: 167 LA---RHTDDEMTGYVATR 182
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 182
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 69/172 (40%), Gaps = 24/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
K+ K + LG G FG+V D ND TG + + C P
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDG--------------TGEMVAVKALKADCG-P 57
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKEFS 611
+H WK+E L+TL KG E G +++ GS L+ L H
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS-LRDYLPRHS-IG 115
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L L + + + Y+H Y+H +L NVLL D +V I DFGLA
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDR---LVKIGDFGLA 164
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ + Y+H Y+H +L NVLL D +V I DFGLA
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDR---LVKIGDFGLA 164
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP-EHLEAWKKE 563
+G G +G V SA D+VN +V K + E+ T C + ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRV-AIKKISPFEHQT-----------YCQRTLREIKILLRF 78
Query: 564 KKLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
+ +G+ PT MK +I+ +DL KLL + + S +
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICY 128
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLA-RVADPDHDHTGFL 184
Query: 678 VE 679
E
Sbjct: 185 TE 186
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 164
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 165 IXDFGLA-RVADPDHDHTGFLTE 186
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 69/172 (40%), Gaps = 24/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
K+ K + LG G FG+V D ND TG + + C P
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDG--------------TGEMVAVKALKADCG-P 57
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKEFS 611
+H WK+E L+TL KG E G +++ GS L+ L H
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS-LRDYLPRHS-IG 115
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L L + + + Y+H Y+H +L NVLL D +V I DFGLA
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDR---LVKIGDFGLA 164
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ + Y+H Y+H +L NVLL D +V I DFGLA
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDR---LVKIGDFGLA 164
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 75
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 76 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 129
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD +
Sbjct: 130 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFV 179
Query: 678 VEK 680
+
Sbjct: 180 ATR 182
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD + +
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFVATR 182
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 47
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 48 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 105 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 157
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 121 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 157
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 68 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 112
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + D++ K V++ + + P +FY+R +
Sbjct: 14 YELGEILGFGGMSEVHLARD-LRDHRDVAVK-VLRADLARDP-----SFYLRFRR----- 61
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 62 ---EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS 172
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS----- 172
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + D++ K V++ + + P +FY+R +
Sbjct: 14 YELGEILGFGGMSEVHLARD-LRDHRDVAVK-VLRADLARDP-----SFYLRFRR----- 61
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 62 ---EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS 172
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS----- 172
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD +
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD + +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFVATR 186
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 487 PGAIFVDSAK----KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLF 542
PG +F+ S K + ++ K LGSG +GEV D V + K + K ST
Sbjct: 24 PG-MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVE-RAIKIIRKTSVST---- 77
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
+ + LE + LK L P + E N Y + K G +
Sbjct: 78 --------SSNSKLLE---EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
++ K F+ + I +L + Y+H VH DLKP N+LL A++ IVDFGL
Sbjct: 127 IIHRMK-FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL 185
Query: 663 ASRYKD 668
++ +++
Sbjct: 186 SAVFEN 191
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+++ L + Y+H VH DLKP N+LL A++ IVDFGL++ + +N K
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF----ENQK--- 193
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQ 135
K GT Y + R K CD+ + L L G P+ Q
Sbjct: 194 --KMKERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD +
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD + +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMAGFVATR 186
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 50
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 51 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 108 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
KK ++ ++LG+G F EV V+ E +TG LF + + K +
Sbjct: 21 KKIFEFKETLGTGAFSEV-----------------VLAEEKATGKLFAVKCIPKKALKGK 63
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+ L+ + A++ E + Y + + G +++ E ++ K+
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-EKGFYTEKDA 122
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
T+ +LD++ Y+H G VH DLKP N+L ++ + I DFGL+
Sbjct: 123 STLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++R LD++ Y+H G VH DLKP N+L ++ + I DFGL+
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++++ L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMT 180
Query: 79 AHIVEK 84
++ +
Sbjct: 181 GYVATR 186
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 84
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 85 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 138
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 139 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYV 188
Query: 678 VEK 680
+
Sbjct: 189 ATR 191
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYVATR 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 76
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 77 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 130
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 131 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 180
Query: 678 VEK 680
+
Sbjct: 181 ATR 183
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 183
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVA----VKKLSRPFQSIIHAKRTY------RELRLLKHMK 75
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 76 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 129
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 130 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 179
Query: 678 VEK 680
+
Sbjct: 180 ATR 182
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 182
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 77
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 127
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 183
Query: 679 E 679
E
Sbjct: 184 E 184
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 162
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 163 ICDFGLA-RVADPDHDHTGFLTE 184
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 99
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 100 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 153
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD +
Sbjct: 154 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMXGXV 203
Query: 678 VEK 680
+
Sbjct: 204 ATR 206
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD + +
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMXGXVATR 206
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 77
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 78 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 131
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 132 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 181
Query: 678 VEK 680
+
Sbjct: 182 ATR 184
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 184
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 495 AKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
AK+ W ++G+ LG G FG VY A + K + +KV LF Q +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---L 46
Query: 550 RCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLD 605
A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 47 EKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-- 102
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG
Sbjct: 103 --SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
++L Y H +H D+KP N+LLG S + I DFG + + +++A
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS----------RRAA 165
Query: 88 HNGTLIYT--SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
GTL Y ++ R + + +L Y L G P+ A
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL---VGKPPFEA 208
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K P F Q + R + ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRK--------ISP-FEHQTYCQRTLR--EIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 168
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 169 ICDFGLA-RVADPDHDHTGFLTE 190
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 76
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 77 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 130
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 131 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 180
Query: 678 VEK 680
+
Sbjct: 181 ATR 183
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 183
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV + + K +++ G
Sbjct: 127 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIRIISKRKFAIGS-------- 177
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 178 AREADPA-LNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 234
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 235 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L +++Y+H G +H DLKP NVLL ++ I DFG + +T + +
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-------LMRTL 301
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 146
T + ++ G +R D L L +G P++ + Q +++K+++
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQI 357
Query: 147 LKDPAKFFTTHYKEPVPDVFVEM 169
F +P+V+ E+
Sbjct: 358 TSGKYNF--------IPEVWAEV 372
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KCQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ L L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGF 187
Query: 81 IVE 83
+ E
Sbjct: 188 LTE 190
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 84
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 134
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 190
Query: 679 E 679
E
Sbjct: 191 E 191
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 169
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 170 ICDFGLA-RVADPDHDHTGFLTE 191
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 85
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 86 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 135
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 191
Query: 679 E 679
E
Sbjct: 192 E 192
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 114 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 170
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 171 ICDFGLA-RVADPDHDHTGFLTE 192
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 76
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 77 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 126
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 182
Query: 679 E 679
E
Sbjct: 183 E 183
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 105 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 161
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 162 ICDFGLA-RVADPDHDHTGFLTE 183
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 86
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 87 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 140
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 141 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 190
Query: 678 VEK 680
+
Sbjct: 191 ATR 193
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 168
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 169 ICDFGLA-RVADPDHDHTGFLTE 190
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 84
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 85 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 138
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 139 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 188
Query: 678 VEK 680
+
Sbjct: 189 ATR 191
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 191
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 91
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 92 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 145
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 146 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 195
Query: 678 VEK 680
+
Sbjct: 196 ATR 198
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 198
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 77
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 127
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLT 183
Query: 679 E 679
E
Sbjct: 184 E 184
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 162
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 163 ICDFGLA-RVADPDHDHTGFLTE 184
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 99
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 100 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 153
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 154 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 203
Query: 678 VEK 680
+
Sbjct: 204 ATR 206
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 206
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 78
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 79 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 132
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 133 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 182
Query: 678 VEK 680
+
Sbjct: 183 ATR 185
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 185
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 81
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 82 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 135
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 136 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 185
Query: 678 VEK 680
+
Sbjct: 186 ATR 188
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 188
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 91
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 92 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 145
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 146 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 195
Query: 678 VEK 680
+
Sbjct: 196 ATR 198
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 198
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++ LAL +L+++H G ++ DLKP N+LL + + + DFGL+ K++ D+ K
Sbjct: 131 YLAELAL-ALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS---KESIDHEK-- 181
Query: 81 IVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
K + GT+ Y + +V RG ++ +L + +L TG+LP+ +++
Sbjct: 182 ---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETM 235
Query: 139 VLAMKEEL 146
+ +K +L
Sbjct: 236 TMILKAKL 243
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 45/178 (25%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL L + F+ ++ + L +L+++H G ++ DLKP N+LL + +
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIK 166
Query: 657 IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVD-AAPKYIT 715
+ DFGL+ K++ D+ K K +C V+ AP+
Sbjct: 167 LTDFGLS---KESIDHEK------------------------KAYSFCGTVEYMAPE--- 196
Query: 716 ISTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 773
+V RG ++ +L + +L TG+LP+ +++ + +K +L
Sbjct: 197 --------VVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETMTMILKAKL 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 84
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 85 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 138
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 139 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 188
Query: 678 VEK 680
+
Sbjct: 189 ATR 191
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 191
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+++ + + + + K+LGSG GEV A + KV + + K +++ G
Sbjct: 141 SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKV-AIRIISKRKFAIGS-------- 191
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
R A P L + + LK L P +K + Y ++ G +L + +K
Sbjct: 192 AREADPA-LNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 248
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
+L +++Y+H G +H DLKP NVLL ++ I DFG
Sbjct: 249 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L +++Y+H G +H DLKP NVLL ++ I DFG + +T + +
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-------LMRTL 315
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 146
T + ++ G +R D L L +G P++ + Q +++K+++
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQI 371
Query: 147 LKDPAKFFTTHYKEPVPDVFVEM 169
F +P+V+ E+
Sbjct: 372 TSGKYNF--------IPEVWAEV 386
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 98
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 99 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 152
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 153 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 202
Query: 678 VEK 680
+
Sbjct: 203 ATR 205
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 205
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 90
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 91 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 144
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 145 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 194
Query: 678 VEK 680
+
Sbjct: 195 ATR 197
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 197
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 81
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 82 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 135
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 136 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 185
Query: 678 VEK 680
+
Sbjct: 186 ATR 188
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 188
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 50
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD 605
+ A EH ++E ++++ L P + G H+ I+ ++ K L
Sbjct: 51 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPRGEVYKELQ 105
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + DS + I+DFGL + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLC---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + DS + I+DFGL + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDSE---LKILDFGLC---RHTDDEMTGYVATR 186
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 102
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 103 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 156
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 157 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 206
Query: 678 VEK 680
+
Sbjct: 207 ATR 209
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 209
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 84
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 85 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 138
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 139 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYV 188
Query: 678 VEK 680
+
Sbjct: 189 ATR 191
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYVATR 191
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 40 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 84
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 185
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 185
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 50
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD 605
+ A EH ++E ++++ L P + G H+ I+ ++ K L
Sbjct: 51 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPRGEVYKELQ 105
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 90
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 91 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 144
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 145 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYV 194
Query: 678 VEK 680
+
Sbjct: 195 ATR 197
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYVATR 197
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ--- 46
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 47 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 103
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 104 ---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 156
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 156
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V S+ D + K+ V K+ + + Y L K K
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIA----VKKLSRPFQSIIHAKRTY------RELRLLKHMK 108
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLTI 618
+GL + E + Y ++ G+DL QKL D+H +F +
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQ---- 162
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 163 ---ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVA 213
Query: 679 EK 680
+
Sbjct: 214 TR 215
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++++ L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMT 209
Query: 79 AHIVEK 84
++ +
Sbjct: 210 GYVATR 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ--- 46
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 47 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 103
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 104 ---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 156
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 156
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLA---RHTDDEMTGYVATR 186
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K P F Q + R + ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKK--------ISP-FEHQTYXQRTLR--EIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA-RVADPDHDHTGFLT 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 168
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 169 ICDFGLA-RVADPDHDHTGFLTE 190
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 85
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 86 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 139
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 140 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 189
Query: 678 VEK 680
+
Sbjct: 190 ATR 192
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 192
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK 192
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK 192
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLX 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 168
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 169 ICDFGLA-RVADPDHDHTGFLXE 190
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 81
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 82 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 135
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 136 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 185
Query: 678 VEK 680
+
Sbjct: 186 ATR 188
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 188
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRV----AVKKLSKPFQSIIHAKRTY------RELRLLKHMK 91
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 92 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 145
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 146 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 195
Query: 678 VEK 680
+
Sbjct: 196 ATR 198
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 198
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 84
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 134
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL ++ + I DFGLA R D D +H +
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADPDHDHTGFLX 190
Query: 679 E 679
E
Sbjct: 191 E 191
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL ++ +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLK 169
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 170 ICDFGLA-RVADPDHDHTGFLXE 191
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D++N +V K + E+ T + ++ ++ + +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRV-AIKKISPFEHQT---YCQRTL-------REIKILLRFR 83
Query: 565 KLKTLGL------PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
+G+ PT MK +I+ +DL KLL + + S +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDV---------YIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
+L L+YIH +H DLKP+N+LL + I DFGLA R D D +H +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA-RVADPDHDHTGFLT 189
Query: 679 E 679
E
Sbjct: 190 E 190
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 60
M + + T N + + L L L+YIH +H DLKP+N+LL +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LK 168
Query: 61 IVDFGLASRYKDTDDNHKAHIVE 83
I DFGLA R D D +H + E
Sbjct: 169 ICDFGLA-RVADPDHDHTGFLTE 190
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 102
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 103 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 156
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 157 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMXGYV 206
Query: 678 VEK 680
+
Sbjct: 207 ATR 209
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++++ L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMX 203
Query: 79 AHIVEK 84
++ +
Sbjct: 204 GYVATR 209
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F+ + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ--- 50
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 51 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 107
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 108 ---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 160
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++ LAL +L+++H G ++ DLKP N+LL + + + DFGL+ K++ D+ K
Sbjct: 131 YLAELAL-ALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS---KESIDHEK-- 181
Query: 81 IVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
K + GT+ Y + +V RG ++ +L + +L TG+LP+ +++
Sbjct: 182 ---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETM 235
Query: 139 VLAMKEEL 146
+ +K +L
Sbjct: 236 TMILKAKL 243
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 45/178 (25%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL L + F+ ++ + L +L+++H G ++ DLKP N+LL + +
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIK 166
Query: 657 IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVD-AAPKYIT 715
+ DFGL+ K++ D+ K K +C V+ AP+
Sbjct: 167 LTDFGLS---KESIDHEK------------------------KAYSFCGTVEYMAPE--- 196
Query: 716 ISTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 773
+V RG ++ +L + +L TG+LP+ +++ + +K +L
Sbjct: 197 --------VVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETMTMILKAKL 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG G FG+VY A + K E VE + C P ++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
L FY + N + I G+ +L+ + + +
Sbjct: 99 L-----------LDAFY-------YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V + LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG G FG+VY A + K E VE + C P ++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
L FY + N + I G+ +L+ + + +
Sbjct: 99 L-----------LDAFY-------YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V + LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++ LAL +L+++H G ++ DLKP N+LL + + + DFGL+ K++ D+ K
Sbjct: 132 YLAELAL-ALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS---KESIDHEK-- 182
Query: 81 IVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
K + GT+ Y + +V RG ++ +L + +L TG+LP+ +++
Sbjct: 183 ---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETM 236
Query: 139 VLAMKEEL 146
+ +K +L
Sbjct: 237 TMILKAKL 244
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 45/178 (25%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL L + F+ ++ + L +L+++H G ++ DLKP N+LL + +
Sbjct: 111 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIK 167
Query: 657 IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVD-AAPKYIT 715
+ DFGL+ K++ D+ K K +C V+ AP+
Sbjct: 168 LTDFGLS---KESIDHEK------------------------KAYSFCGTVEYMAPE--- 197
Query: 716 ISTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 773
+V RG ++ +L + +L TG+LP+ +++ + +K +L
Sbjct: 198 --------VVNRRGHTQSADWWSFGVLMFEML---TGTLPFQGKDRKETMTMILKAKL 244
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 85
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 86 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 139
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++
Sbjct: 140 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYV 189
Query: 678 VEK 680
+
Sbjct: 190 ATR 192
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD ++ +
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGYVATR 192
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 68 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 112
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG G FG+VY A + K E VE + C P ++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
L FY + N + I G+ +L+ + + +
Sbjct: 99 L-----------LDAFY-------YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V + LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 184
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++++ SD +KL + + T+ +LL ++Y+H G +H DLKPAN L+ D
Sbjct: 133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD 192
Query: 650 SSQAIVNIVDFGLA 663
S V + DFGLA
Sbjct: 193 CS---VKVCDFGLA 203
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L ++Y+H G +H DLKPAN L+ D S V + DFGLA
Sbjct: 166 LVGVKYVHSAGILHRDLKPANCLVNQDCS---VKVCDFGLA 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 492 VDSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN 546
++S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ- 48
Query: 547 FYVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQK 602
+ A EH ++E ++++ L P + G Y + + G+ +LQK
Sbjct: 49 --LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +F + T T + L ++L Y H +H D+KP N+LLG S + I +FG
Sbjct: 105 L----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGW 157
Query: 663 A 663
+
Sbjct: 158 S 158
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I +FG +
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWS 158
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS----- 189
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 238
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + ++ K V++ + + P +FY+R +
Sbjct: 31 YELGEILGFGGMSEVHLARD-LRLHRDVAVK-VLRADLARDP-----SFYLRFRR----- 78
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 79 ---EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS 189
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 496 KKSWKVGKSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
K+ K + LG G FG+V D ND TG + + A P
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDG--------------TGEMVAVKALKAD-AGP 74
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKEFS 611
+H WK+E L+TL KG E G + +++ GS L+ L H
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS-LRDYLPRHS-IG 132
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
L L + + + Y+H Y+H DL NVLL D +V I DFGLA K +
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR---LVKIGDFGLA---KAVPE 186
Query: 672 NHKAHIVEK 680
H+ + V +
Sbjct: 187 GHEXYRVRE 195
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+ + Y+H Y+H DL NVLL D +V I DFGLA K + H+ + V +
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDR---LVKIGDFGLA---KAVPEGHEXYRVRE 195
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD +
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGXV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DFGLA + TDD + +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLA---RHTDDEMTGXVATR 186
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 50
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 51 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 104
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 105 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 154
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 118 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 42 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 86
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 187
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 187
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 52
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 53 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 106
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 107 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 156
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
++L Y H +H D+KP N+LLG S + I DFG + + +++
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSCHAPSS----------RRTT 166
Query: 88 HNGTLIYT--SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
+GTL Y ++ R + + +L Y L G P+ A
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL---VGKPPFEA 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 4 GSKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ--- 49
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 50 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 106
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 107 ---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 159
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 159
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 54
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 55 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 108
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 109 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+D+GLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDYGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+D+GLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDYGLA---RHTDDEMTGYVATR 186
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS----- 172
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 221
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + ++ K V++ + + P +FY+R +
Sbjct: 14 YELGEILGFGGMSEVHLARD-LRLHRDVAVK-VLRADLARDP-----SFYLRFRR----- 61
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 62 ---EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS 172
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 86
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 87 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 140
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 141 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
V+ A +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS----- 172
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V + +A GT Y S RG +R D+ L L + TG P+T
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTG 221
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++G+ LG GG EV+ A D + ++ K V++ + + P +FY+R +
Sbjct: 14 YELGEILGFGGMSEVHLARD-LRLHRDVAVK-VLRADLARDP-----SFYLRFRR----- 61
Query: 559 AWKKEKKLKTLGLPTFYAM--KGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNT 615
+ + L P A+ G+ E +I++ G L+ ++ + K
Sbjct: 62 ---EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ + + +L + H G +H D+KPAN+++ S+ V ++DFG+A D+ ++
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNS 172
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKEIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFGLA R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK 192
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFGLA R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK 192
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMK-VEYSTGPLFVEQNFYVRCAK---P 554
W++ + LG+GGFG YV++ + TG EQ +C + P
Sbjct: 16 WEMKERLGTGGFG------------------YVLRWIHQDTG----EQVAIKQCRQELSP 53
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMK----GQQEHNGNSYRFIIISKF-GSDLQKLLDEHK 608
++ E W E + +K L P + + G Q+ N + + G DL+K L++ +
Sbjct: 54 KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE 113
Query: 609 EF-SLKN--TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
LK T+ S + +L Y+H +H DLKP N++L + I I+D G A
Sbjct: 114 NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H +H DLKP N++L + I I+D G A
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 493 DSAKKSW-----KVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
+S K+ W ++G+ LG G FG VY A + K + +KV LF Q
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ-- 47
Query: 548 YVRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKL 603
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 48 -LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 604 LDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+F + T T + L ++L Y H +H D+KP N+LLG S + I +FG +
Sbjct: 105 ----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWS 157
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I +FG +
Sbjct: 121 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWS 157
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 86
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 87 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 140
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 141 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMK-VEYSTGPLFVEQNFYVRCAK---P 554
W++ + LG+GGFG YV++ + TG EQ +C + P
Sbjct: 17 WEMKERLGTGGFG------------------YVLRWIHQDTG----EQVAIKQCRQELSP 54
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMK----GQQEHNGNSYRFIIISKF-GSDLQKLLDEHK 608
++ E W E + +K L P + + G Q+ N + + G DL+K L++ +
Sbjct: 55 KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE 114
Query: 609 EF-SLKN--TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
LK T+ S + +L Y+H +H DLKP N++L + I I+D G A
Sbjct: 115 NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H +H DLKP N++L + I I+D G A
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 480 KLPDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATD-DVNDNKVDGYKYVMKVEYST 538
KLP IKP F +K + V LG G F +VY AT D+ND K + K+V+KV+
Sbjct: 50 KLP-AIKPKTEFQLGSKLVY-VHHLLGEGAFAQVYEATQGDLNDAK-NKQKFVLKVQKPA 106
Query: 539 GPLFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGS 598
P FY+ E L+ + +K FY+ Q NG+ + S +G+
Sbjct: 107 NPW----EFYIGTQLMERLKPSMQHMFMK------FYSAHLFQ--NGSVLVGELYS-YGT 153
Query: 599 DLQ--KLLDEHKEFSLKNTLTIGSSL--LDSLEYIHHCGYVHADLKPANVLLG------- 647
L L E + L I ++ L +E +H C +H D+KP N +LG
Sbjct: 154 LLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213
Query: 648 -VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSY 706
D A + ++D G + D K I K +G C+ M W
Sbjct: 214 DEDDLSAGLALIDLGQSI---DMKLFPKGTIFTAKCETSGFQCVE-----MLSNKPWNYQ 265
Query: 707 VDAAPKYITISTLIYTSLVA-HRGAKTTSRICDIEILAYNLLHLN 750
+D Y ++ +Y L + K C E L L HL+
Sbjct: 266 ID----YFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLD 306
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 15 QNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLG--------VDSSQAIVNIVDFG 65
Q + + + +R+ L +E +H C +H D+KP N +LG D A + ++D G
Sbjct: 171 QGLVISFAMRM-LYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 164
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
L+S+ Y H G VH +LKP N+LL + A V + DFGLA D++ H
Sbjct: 114 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 164
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 51
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 52 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 105
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 106 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 155
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 86
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 87 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 140
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 141 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
L L+YIH +H DLKP+N+ + D + I+DFGLA D
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTAD 184
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 68 KTLGTGSFGRVM-----LVKHKESGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 112
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 213
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K++G+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTIGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G D+ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ + + LG G FG VY A + N K++M ++ LF Q + EH
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQN-------KFIMALKV----LFKSQ---LEKEGVEH-- 59
Query: 559 AWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLT 617
++E ++++ L P M Y + + G +L K L +H F + + T
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG-ELYKELQKHGRFDEQRSAT 118
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 161
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
D+L Y H +H D+KP N+L+G + I DFG +
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS 161
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKV------LFKAQ---LEKAGV 54
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 55 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 108
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 109 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 158
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
++L Y H +H D+KP N+LLG S + I DFG + + +++A
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS----------RRAA 168
Query: 88 HNGTLIYT--SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
GTL Y ++ R + + +L Y L G P+ A
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL---VGKPPFEA 211
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKEIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFGLA R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK 192
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFGLA R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK 192
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K++G+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTIGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G D+ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + +++G+ LG G FG VY A + K + +KV LF Q + A
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLARE-----KQRKFILALKV------LFKAQ---LEKAGV 48
Query: 555 EHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLLDEHKEF 610
EH ++E ++++ L P + G Y + + G+ +LQKL +F
Sbjct: 49 EH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKF 102
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 103 DEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 152
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 116 NALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS 152
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G + MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKETGNHFAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G + MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKETGNHFAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G + MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHKETGNHFAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + ++ +G G +G+V+ A D N + K +V TG + + A
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVL 65
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKN 614
HLE ++ ++ + T + + ++ DL LD+ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLT------LVFEHVDQDLTTYLDKVPEPGVP- 118
Query: 615 TLTIGS---SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
T TI LL L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + +K G Y MK+ +++ V+ + EH +
Sbjct: 40 KTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 84
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 185
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 185
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 87
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 88 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 147
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 205
Query: 664 SRYKDT 669
+ KDT
Sbjct: 206 ALLKDT 211
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 205
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 206 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 252
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 253 GDIPFEHDEE 262
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++++ SDL +++ + +L++ LL L+Y+H +H DLKP+N+L+ +
Sbjct: 136 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 195
Query: 650 SSQAIVNIVDFGLASRYKDTDDNHKAHIVE---KKSAHNGESCLSLRKLFMQKVAFW 703
+ I DFG+A + H+ + E + E LSL + + Q + W
Sbjct: 196 CE---LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE-YTQAIDLW 248
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+R+ L L L+Y+H +H DLKP+N+L+ + + I DFG+A + H+
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQ 217
Query: 79 AHIVE 83
+ E
Sbjct: 218 YFMTE 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 59
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 60 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 119
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 177
Query: 664 SRYKDT 669
+ KDT
Sbjct: 178 ALLKDT 183
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 177
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 178 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 224
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 225 GDIPFEHDEE 234
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 59
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 60 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 119
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 177
Query: 664 SRYKDT 669
+ KDT
Sbjct: 178 ALLKDT 183
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 177
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 178 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 224
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 225 GDIPFEHDEE 234
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 60
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 664 SRYKDT 669
+ KDT
Sbjct: 179 ALLKDT 184
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 179 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 225
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 226 GDIPFEHDEE 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 60
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 664 SRYKDT 669
+ KDT
Sbjct: 179 ALLKDT 184
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 179 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 225
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 226 GDIPFEHDEE 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 60
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 664 SRYKDT 669
+ KDT
Sbjct: 179 ALLKDT 184
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 178
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 179 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 225
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 226 GDIPFEHDEE 235
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K S + E R P
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEKDRISD---WGELPNGTRV--PM 88
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD---EHKEFSL 612
+ KK G + E + F++I + +Q L D E
Sbjct: 89 EVVLLKKVSS----GFSGVIRLLDWFERPDS---FVLILERPEPVQDLFDFITERGALQE 141
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT 196
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 190
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 191 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 237
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 238 GDIPFEHDEE 247
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 20/197 (10%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
+ LG G F V+ A D VN+ V K V + T E R ++
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHV-AMKIVRGDKVYTEAAEDEIKLLQRVNDADN------ 77
Query: 563 EKKLKTLGLPTFYAMKGQQEHNG--NSYRFIIISKFGSDLQKLLD--EHKEFSLKNTLTI 618
K ++G + H G + ++ G +L L+ EH+ L I
Sbjct: 78 -TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 619 GSSLLDSLEYIHH-CGYVHADLKPANVLLG-VDSSQAIVN--IVDFGLASRYKDTDDNHK 674
LL L+Y+H CG +H D+KP NVL+ VDS + ++ I D G A Y D H
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY----DEHY 192
Query: 675 AHIVEKKSAHNGESCLS 691
+ ++ + + E L
Sbjct: 193 TNSIQTREYRSPEVLLG 209
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 17 VWLRWVLRLALDSLEYIHH-CGYVHADLKPANVLLG-VDSSQAIVN--IVDFGLASRYKD 72
++++ + + L L+Y+H CG +H D+KP NVL+ VDS + ++ I D G A Y +
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + ++ +G G +G+V+ A D N + K +V TG + + A
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVL 65
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKN 614
HLE ++ ++ + T + + ++ DL LD+ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTV------SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP- 118
Query: 615 TLTIGS---SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
T TI LL L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D ++V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+DF LA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFYLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+DF LA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFYLA---RHTDDEMTGYVATR 186
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 495 AKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
A + ++ +G G +G+V+ A D N + K +V TG + + A
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVL 65
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKN 614
HLE ++ ++ + T + + ++ DL LD+ E +
Sbjct: 66 RHLETFEHPNVVRLFDVCTV------SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP- 118
Query: 615 TLTIGS---SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
T TI LL L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L+++H VH DLKP N+L+ +S + + DFGLA Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIY 170
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +++DE + +T+ + + + ++H +H DLKP N+L V+ +
Sbjct: 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILC-VNRDAKQIK 229
Query: 657 IVDFGLASRYK 667
I+DFGLA RYK
Sbjct: 230 IIDFGLARRYK 240
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
++ + + ++H +H DLKP N+L V+ + I+DFGLA RYK
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYK 240
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSWK-----VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+K+ W +G+ LG G FG VY A + + K+++ ++ LF Q
Sbjct: 4 GSKRQWTLEDFDIGRPLGKGKFGNVYLARERQS-------KFILALKV----LFKTQ--- 49
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 50 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 106
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 107 ---SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWS 159
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
++L Y H +H D+KP N+LLG S + I DFG + + +++
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWSVHAPSS----------RRTT 169
Query: 88 HNGTLIYT--SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE-QQPEKVLAMKE 144
GTL Y ++ R + + +L Y L G P+ A+ Q+ + ++ E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL---VGMPPFEAHTYQETYRRISRVE 226
Query: 145 ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKA 194
D F T E D+ + K+ AS + +A + L+ ++KA
Sbjct: 227 FTFPD----FVT---EGARDLISRLLKHNASQRLTLA---EVLEHPWIKA 266
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 494 SAKKSWK-----VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
+K+ W +G+ LG G FG VY A + + K+++ ++ LF Q
Sbjct: 4 GSKRQWTLEDFDIGRPLGKGKFGNVYLARERQS-------KFILALKV----LFKTQ--- 49
Query: 549 VRCAKPEHLEAWKKEKKLKT-LGLPTFYAMKGQQEHNGNSYRFIIISKFGS---DLQKLL 604
+ A EH ++E ++++ L P + G Y + + G+ +LQKL
Sbjct: 50 LEKAGVEH--QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL- 106
Query: 605 DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F + T T + L ++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 107 ---SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWS 159
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++L Y H +H D+KP N+LLG S + I DFG +
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWS 159
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + G Y MK+ +++ V+ + EH +
Sbjct: 33 KTLGTGSFGRVMLVK-----HMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 77
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 178
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 178
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 72
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 73 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 132
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 190
Query: 664 SRYKDT 669
+ KDT
Sbjct: 191 ALLKDT 196
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 190
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 191 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 237
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 238 GDIPFEHDEE 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 73
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 74 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 133
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 664 SRYKDT 669
+ KDT
Sbjct: 192 ALLKDT 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 192 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 238
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 239 GDIPFEHDEE 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 73
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 74 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 133
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 664 SRYKDT 669
+ KDT
Sbjct: 192 ALLKDT 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 192 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 238
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 239 GDIPFEHDEE 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 45
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 46 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 105
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 163
Query: 664 SRYKDT 669
+ KDT
Sbjct: 164 ALLKDT 169
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 26 ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKK 85
L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT----------VY 171
Query: 86 SAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ 134
+ +GT +Y+ + HR ++ + + IL Y+++ G +P+ E+
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---CGDIPFEHDEE 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 73
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 74 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 133
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 664 SRYKDT 669
+ KDT
Sbjct: 192 ALLKDT 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 192 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 238
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 239 GDIPFEHDEE 248
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K S + E R P
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEKDRISD---WGELPNGTRV--PM 89
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD---EHKEFSL 612
+ KK G + E + F++I + +Q L D E
Sbjct: 90 EVVLLKKVSS----GFSGVIRLLDWFERPDS---FVLILERPEPVQDLFDFITERGALQE 142
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 143 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 191
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 192 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 238
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 239 GDIPFEHDEE 248
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K S + E R P
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEKDRISD---WGELPNGTRV--PM 88
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD---EHKEFSL 612
+ KK G + E + F++I + +Q L D E
Sbjct: 89 EVVLLKKVSS----GFSGVIRLLDWFERPDS---FVLILERPEPVQDLFDFITERGALQE 141
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT 196
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 190
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 191 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 237
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 238 GDIPFEHDEE 247
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K S + E R P
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEKDRISD---WGELPNGTRV--PM 88
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD---EHKEFSL 612
+ KK G + E + F++I + +Q L D E
Sbjct: 89 EVVLLKKVSS----GFSGVIRLLDWFERPDS---FVLILERPEPVQDLFDFITERGALQE 141
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT 196
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 190
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 191 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 237
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 238 GDIPFEHDEE 247
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 20/197 (10%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
+ LG G F V+ A D VN+ V K V + T E R ++
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHV-AMKIVRGDKVYTEAAEDEIKLLQRVNDADN------ 77
Query: 563 EKKLKTLGLPTFYAMKGQQEHNG--NSYRFIIISKFGSDLQKLLD--EHKEFSLKNTLTI 618
K ++G + H G + ++ G +L L+ EH+ L I
Sbjct: 78 -TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 619 GSSLLDSLEYIHH-CGYVHADLKPANVLLG-VDSSQAIVN--IVDFGLASRYKDTDDNHK 674
LL L+Y+H CG +H D+KP NVL+ VDS + ++ I D G A Y D H
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY----DEHY 192
Query: 675 AHIVEKKSAHNGESCLS 691
+ ++ + + E L
Sbjct: 193 TNSIQTREYRSPEVLLG 209
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 17 VWLRWVLRLALDSLEYIHH-CGYVHADLKPANVLLG-VDSSQAIVN--IVDFGLASRYKD 72
++++ + + L L+Y+H CG +H D+KP NVL+ VDS + ++ I D G A Y +
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++++ SDL +++ + +L++ LL L+Y+H +H DLKP+N+L+ +
Sbjct: 135 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 194
Query: 650 SSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA---HNGESCLSLRKLFMQKVAFW 703
+ I DFG+A + H+ + E + E LSL + + Q + W
Sbjct: 195 CE---LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE-YTQAIDLW 247
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+R+ L L L+Y+H +H DLKP+N+L+ + + I DFG+A + H+
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQ 216
Query: 79 AHIVE 83
+ E
Sbjct: 217 YFMTE 221
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 42 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 79
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 80 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 139
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 197
Query: 664 SRYKDT 669
+ KDT
Sbjct: 198 ALLKDT 203
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 197
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 198 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 244
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 245 GDIPFEHDEE 254
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K S + E R P
Sbjct: 55 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEKDRISD---WGELPNGTRV--PM 108
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD---EHKEFSL 612
+ KK G + E + F++I + +Q L D E
Sbjct: 109 EVVLLKKVSS----GFSGVIRLLDWFERPDS---FVLILERPEPVQDLFDFITERGALQE 161
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 162 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT 216
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 153 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 210
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 211 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 257
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 258 GDIPFEHDEE 267
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++ LAL L+++H G ++ DLKP N+LL + + + DFGL+ K+ D+ K
Sbjct: 135 YLAELAL-GLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS---KEAIDHEK-- 185
Query: 81 IVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEK 138
K + GT+ Y + +V +G ++ +L + +L TGSLP+ +++
Sbjct: 186 ---KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEML---TGSLPFQGKDRKETM 239
Query: 139 VLAMKEEL 146
L +K +L
Sbjct: 240 TLILKAKL 247
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL L + F+ ++ + L L+++H G ++ DLKP N+LL + +
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIK 170
Query: 657 IVDFGLASRYKD 668
+ DFGL+ D
Sbjct: 171 LTDFGLSKEAID 182
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVK 192
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVK 192
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
++LG+G FG V + +K G Y MK+ +++ V+ + EH
Sbjct: 48 RTLGTGSFGRVM-----LVKHKETGNHYAMKI--------LDKQKVVKLKQIEHT---LN 91
Query: 563 EKKLK-TLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
EK+++ + P ++ + N N Y + + G ++ L FS + +
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAP-GGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
++ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 193
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 87
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 88 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 147
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 205
Query: 664 SRYKDT 669
+ KDT
Sbjct: 206 ALLKDT 211
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 205
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 206 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 252
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 253 GDIPFEHDEE 262
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV D + + Y +KV AK + +E
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-----YAVKVINKAS------------AKNKDTSTILREV 72
Query: 565 KL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEHKEFSLKNTLTIGSS 621
+L K L P + E +S F I+ + G +L + + K FS + I
Sbjct: 73 ELLKKLDHPNIMKLFEILE---DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+++ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K GT Y + RG T CD+ L L +G+ P+
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV D + + Y +KV AK + +E
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-----YAVKVINKAS------------AKNKDTSTILREV 72
Query: 565 KL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEHKEFSLKNTLTIGSS 621
+L K L P + E +S F I+ + G +L + + K FS + I
Sbjct: 73 ELLKKLDHPNIMKLFEILE---DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+++ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K GT Y + RG T CD+ L L +G+ P+
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G +G V SA D V +V K + E+ T + ++ + + L ++ E
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRV-AIKKISPFEHQT---YCQRTL----REIQILLRFRHEN 102
Query: 565 KL---KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L T AM+ +I+ +DL KLL + ++ S +
Sbjct: 103 VIGIRDILRASTLEAMRDV---------YIVQDLMETDLYKLL-KSQQLSNDHICYFLYQ 152
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVE 679
+L L+YIH +H DLKP+N+L+ ++ + I DFGLA R D + +H + E
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLA-RIADPEHDHTGFLTE 206
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ L L L+YIH +H DLKP+N+L+ ++ + I DFGLA R D + +H
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLA-RIADPEHDHTGF 203
Query: 81 IVE 83
+ E
Sbjct: 204 LTE 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 192
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 192
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV D ++ +Y +KV AK + +E
Sbjct: 30 LGKGSFGEVLKCKD-----RITQQEYAVKV------------INKASAKNKDTSTILREV 72
Query: 565 KL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEHKEFSLKNTLTIGSS 621
+L K L P + E +S F I+ + G +L + + K FS + I
Sbjct: 73 ELLKKLDHPNIMKLFEILE---DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+++ + Y+H VH DLKP N+LL + I+DFGL++ ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K GT Y + RG T CD+ L L +G+ P+
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+ FGLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILGFGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+ FGLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILGFGLA---RHTDDEMTGYVATR 186
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L FS + + +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S K+ K LG+G FGEV+ AT N + K + S E N
Sbjct: 14 RESLKLEKKLGAGQFGEVWMAT--YNKHTKVAVKTMKPGSMSVEAFLAEANVM------- 64
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL-LDEHKEFS 611
K L+ L +A+ ++ II++F GS L L DE +
Sbjct: 65 --------KTLQHDKLVKLHAVVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L + + + + + +I Y+H DL+ AN+L+ S+ + I DFGLA +D +
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE 165
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S+ + I DFGLA +D +
Sbjct: 122 EGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE 165
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 6 VDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
+D+ + ++ +LR L L+Y+H +H D+K ANVLL S Q V + DFG
Sbjct: 105 LDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFG 161
Query: 66 LASRYKDT 73
+A + DT
Sbjct: 162 VAGQLTDT 169
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 36/172 (20%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV--RCAKP---EHLEA 559
+G G FGEVY D+ + +V K + E ++Q V +C P + +
Sbjct: 27 IGKGSFGEVYKGIDN-HTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 560 WKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL--T 617
+ K KL +II+ G LD K L+ T T
Sbjct: 86 YLKSTKL-----------------------WIIMEYLGGG--SALDLLKPGPLEETYIAT 120
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
I +L L+Y+H +H D+K ANVLL S Q V + DFG+A + DT
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT 169
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 28 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 67
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHASETKFE 118
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+K + I ++Y+H +H DLK N+ L D++ V I DFGLA+
Sbjct: 119 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSG 175
Query: 672 NHK 674
+H+
Sbjct: 176 SHQ 178
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D++ V I DFGLA+ +H+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSGSHQFEQ 181
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + + S D+ L L TG LP++
Sbjct: 182 L------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDAGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDAGLA---RHTDDEMTGYVATR 186
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +++ ++LG+G FG V+ + ++ +G Y MKV +++ VR + EH
Sbjct: 6 QDFQILRTLGTGSFGRVH-----LIRSRHNGRYYAMKV--------LKKEIVVRLKQVEH 52
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEHKEFSLKN 614
+ L + P M G + ++ + +I + G +L LL + + F
Sbjct: 53 TN--DERLMLSIVTHPFIIRMWGTFQ---DAQQIFMIMDYIEGGELFSLLRKSQRFPNPV 107
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD------ 668
+ + +LEY+H ++ DLKP N+LL + I DFG A D
Sbjct: 108 AKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVTYXLC 164
Query: 669 -TDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDA 709
T D +V K + S L + +A + + D+
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD-------TDDNHKAHI 81
+LEY+H ++ DLKP N+LL + I DFG A D T D +
Sbjct: 118 ALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEV 174
Query: 82 VEKKSAHN-------GTLIYTSLVAH------RGAKTTSRICDIEI 114
V K + G LIY L + KT +I + E+
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+S+ + H G VH DLKP N+LL S A V + DFGLA
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 30 LEYIHHC---GYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LE ++HC G VH DLKP N+LL S A V + DFGLA
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 41/173 (23%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 16 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 55
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 56 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHASETKFE 106
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
+K + I ++Y+H +H DLK N+ L D++ V I DFGLA+
Sbjct: 107 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLAT 156
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D++ V I DFGLA+ +H+
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLATVKSRWSGSHQFEQ 169
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + + S D+ L L TG LP++
Sbjct: 170 L------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDRGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDRGLA---RHTDDEMTGYVATR 186
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 42/181 (23%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMK-VEYSTGPLFVEQN-----------FYVRC- 551
+GSGGFG+V+ A +++DG YV+K V+Y+ E Y C
Sbjct: 19 IGSGGFGQVFKAK-----HRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCW 73
Query: 552 ----AKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH 607
PE K K L + + KG E I + G L K+L
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQ-------WIEKRRGEKLDKVL--- 123
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
L + + ++YIH ++ DLKP+N+ L VD+ Q V I DFGL + K
Sbjct: 124 -------ALELFEQITKGVDYIHSKKLINRDLKPSNIFL-VDTKQ--VKIGDFGLVTSLK 173
Query: 668 D 668
+
Sbjct: 174 N 174
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 10 WTNATQNVWLRWVLRLAL-----DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 64
W + L VL L L ++YIH ++ DLKP+N+ L VD+ Q V I DF
Sbjct: 110 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL-VDTKQ--VKIGDF 166
Query: 65 GLASRYKDTDDNHKAHIVEKKSAHNGTLIYTS 96
GL + K+ K+ GTL Y S
Sbjct: 167 GLVTSLKNDG---------KRXRSKGTLRYMS 189
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 40
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 41 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 100
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 664 SRYKDT 669
+ KDT
Sbjct: 159 ALLKDT 164
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 159 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 205
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 206 GDIPFEHDEE 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 40
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 41 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 100
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 664 SRYKDT 669
+ KDT
Sbjct: 159 ALLKDT 164
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 159 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 205
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 206 GDIPFEHDEE 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 28 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 67
Query: 561 KKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFSLK 613
K E +K + + + F + + I++++ GS L L +F +K
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYS-------TAPQLAIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+ I ++Y+H +H DLK N+ L D++ V I DFGLA+ +H
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSGSH 177
Query: 674 K 674
+
Sbjct: 178 Q 178
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D++ V I DFGLA+ +H+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSGSHQFEQ 181
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + + S D+ L L TG LP++
Sbjct: 182 L------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+GSG +G V +A D +V V K+ + + Y L K K
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRV----AVKKLSRPFQSIIHAKRTY------RELRLLKHMK 79
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSLKNTLT 617
+GL F + +E N +++ G+DL QKL D+H +F +
Sbjct: 80 HENVIGLLDVFTPARSLEEFND---VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--- 133
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 677
+L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++
Sbjct: 134 ----ILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDGGLA---RHTDDEMTGYV 183
Query: 678 VEK 680
+
Sbjct: 184 ATR 186
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
L L+YIH +H DLKP+N+ + D + I+D GLA + TDD ++ +
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDGGLA---RHTDDEMTGYVATR 186
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKK 681
L+ +EY+H+ +H D+KP+N+L+G D + I DFG+++ +K + D ++ V
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFKGS-DALLSNTVGTP 201
Query: 682 SAHNGESCLSLRKLFMQK--------VAFWCSYVDAAP 711
+ ES RK+F K V +C P
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R+ + + +EY+H+ +H D+KP+N+L+G D + I DFG+++ +K +D
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFKGSD 191
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 30 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 67
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 68 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 127
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 128 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 185
Query: 664 SRYKDT 669
+ KDT
Sbjct: 186 ALLKDT 191
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 128 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 185
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 186 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 232
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 233 GDIPFEHDEE 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 6 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 43
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 44 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 103
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 104 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 161
Query: 664 SRYKDT 669
+ KDT
Sbjct: 162 ALLKDT 167
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 104 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 161
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 162 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 208
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 209 GDIPFEHDEE 218
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+S+ + H G VH DLKP N+LL S A V + DFGLA
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 30 LEYIHHC---GYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LE ++HC G VH DLKP N+LL S A V + DFGLA
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K++G+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTIGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L FS + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK 192
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV--RCAKPEHLEAWKK 562
+G G FGEV+ D+ KV K + E ++Q V +C P
Sbjct: 15 IGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP-------- 65
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
Y K + ++ +II+ G L E TI +
Sbjct: 66 ------------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 157
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI------ 159
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
K++ GT + + + + S+ DI L + L G P + E P KVL
Sbjct: 160 --KRNTFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELARGEPPHS--ELHPMKVLF 214
Query: 142 M 142
+
Sbjct: 215 L 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV--RCAKPEHLEAWKK 562
+G G FGEV+ D+ KV K + E ++Q V +C P
Sbjct: 15 IGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP-------- 65
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
Y K + ++ +II+ G L E TI +
Sbjct: 66 ------------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 157
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI------ 159
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
K++ GT + + + + S+ DI L + L G P + E P KVL
Sbjct: 160 --KRNXFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELARGEPPHS--ELHPMKVLF 214
Query: 142 M 142
+
Sbjct: 215 L 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV--RCAKPEHLEAWKK 562
+G G FGEV+ D+ KV K + E ++Q V +C P
Sbjct: 30 IGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP-------- 80
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
Y K + ++ +II+ G L E TI +
Sbjct: 81 ------------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 172
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI------ 174
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
K++ GT + + + + S+ DI L + L G P + E P KVL
Sbjct: 175 --KRNXFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELARGEPPHS--ELHPMKVLF 229
Query: 142 M 142
+
Sbjct: 230 L 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 45
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 46 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 105
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 163
Query: 664 SRYKDT 669
+ KDT
Sbjct: 164 ALLKDT 169
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 163
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 164 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 210
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 211 GDIPFEHDEE 220
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 42/185 (22%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S K+ K LG+G FGEV+ + N KV V+ KP
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVA----------------------VKTLKPG 47
Query: 556 HL--EAWKKEKKL-KTLG---LPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL-LD 605
+ +A+ +E L KTL L YA+ ++E II++F GS L L D
Sbjct: 48 TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP------IYIITEFMAKGSLLDFLKSD 101
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
E + L + + + + + YI Y+H DL+ ANVL+ S + I DFGLA
Sbjct: 102 EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARV 158
Query: 666 YKDTD 670
+D +
Sbjct: 159 IEDNE 163
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + YI Y+H DL+ ANVL+ S + I DFGLA +D +
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE 163
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L + E +S ++ +L+++ Y+H G VH DLKP N+L + A +
Sbjct: 132 GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLK 191
Query: 657 IVDFGLA 663
I DFGL+
Sbjct: 192 IADFGLS 198
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++ Y+H G VH DLKP N+L + A + I DFGL+
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L + + + K FS I L+ ++ ++H G VH DLKP N+L ++ +
Sbjct: 90 GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149
Query: 657 IVDFGLASRYKDTDD 671
I+DFG A R K D+
Sbjct: 150 IIDFGFA-RLKPPDN 163
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+++R + ++ ++H G VH DLKP N+L ++ + I+DFG A R K D+
Sbjct: 110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA-RLKPPDN----- 163
Query: 81 IVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ 134
+ TL Y + L+ G + + + ++ Y +L +G +P+ ++++
Sbjct: 164 --QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML---SGQVPFQSHDR 214
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 44
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 45 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 104
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 162
Query: 664 SRYKDT 669
+ KDT
Sbjct: 163 ALLKDT 168
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 162
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 163 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 209
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 210 GDIPFEHDEE 219
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 45
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 46 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 105
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 163
Query: 664 SRYKDT 669
+ KDT
Sbjct: 164 ALLKDT 169
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 163
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 164 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 210
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 211 GDIPFEHDEE 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 44
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLD- 605
+ W + + + K +G F++I + +Q L D
Sbjct: 45 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDF 104
Query: 606 --EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E + + +L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 162
Query: 664 SRYKDT 669
+ KDT
Sbjct: 163 ALLKDT 168
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+CG +H D+K N+L +D ++ + ++DFG
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 162
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 163 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 209
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 210 GDIPFEHDEE 219
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L+ L+Y+H VH D+K NVL +++ ++ I DFG + R A I
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKRL--------AGINPCTE 181
Query: 87 AHNGTLIYTS-LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE-QQPE------- 137
GTL Y + + +G + + DI L ++ + TG P+ YE +P+
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAMFKVG 239
Query: 138 --KVLAMKEELLKDPAKFFTTHYKEPVP-------DVFVEMFKYIASTKFEVAP 182
KV E + AK F EP P D+ V+ F ++S K + P
Sbjct: 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 614 NTLTIG---SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
N TIG +L+ L+Y+H VH D+K NVL +++ ++ I DFG + R
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKR 172
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 192
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y ++ G ++ L F + + +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+L+ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK 193
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV--RCAKPEHLEAWKK 562
+G G FGEV+ D+ KV K + E ++Q V +C P
Sbjct: 35 IGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP-------- 85
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
Y K + ++ +II+ G L E TI +
Sbjct: 86 ------------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 133
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 177
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+LR L L+Y+H +H D+K ANVLL S V + DFG+A + DT
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI------ 179
Query: 82 VEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLA 141
K++ GT + + + + S+ DI L + L G P + E P KVL
Sbjct: 180 --KRNTFVGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELARGEPPHS--ELHPMKVLF 234
Query: 142 M 142
+
Sbjct: 235 L 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 82
L AL+ LEY+H +H D+K NVLL D S A + DFG A +
Sbjct: 191 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAA--LCDFGHAVCLQPDGLG------ 242
Query: 83 EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYN----LLHLNTGSLPWTAYEQQP 136
KS G I + R CD ++ ++ +LH+ G PWT + + P
Sbjct: 243 --KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 30/161 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV+ D K G++ +K VR LE ++ E+
Sbjct: 101 LGRGSFGEVHRMED-----KQTGFQCAVK--------------KVR------LEVFRAEE 135
Query: 565 KLKTLGL--PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
+ GL P + G F+ + + GS L +L+ E L
Sbjct: 136 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS-LGQLVKEQGCLPEDRALYYLGQA 194
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L+ LEY+H +H D+K NVLL D S A + DFG A
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAA--LCDFGHA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 47 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 91
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L F + + +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 192
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 192
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 24/216 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+ KKE + K L G + Y F+ G +L ++ +
Sbjct: 52 I---KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDA 107
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 164
Query: 676 HIVEKKSAHNGESCLSLRKLFMQKVAFW-CSYVDAA 710
+ + + L R+ + V W C V A
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 200
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMX---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 24/216 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+ KKE + K L G + Y F+ G +L ++ +
Sbjct: 51 I---KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDA 106
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 676 HIVEKKSAHNGESCLSLRKLFMQKVAFW-CSYVDAA 710
+ + + L R+ + V W C V A
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMX---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S K+ K LG+G FGEV+ AT N + K + S E N
Sbjct: 187 RESLKLEKKLGAGQFGEVWMAT--YNKHTKVAVKTMKPGSMSVEAFLAEANVM------- 237
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL-LDEHKEFS 611
K L+ L +A+ ++ II++F GS L L DE +
Sbjct: 238 --------KTLQHDKLVKLHAVVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L + + + + + +I Y+H DL+ AN+L+ S+ + I DFGLA +D +
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE 338
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S+ + I DFGLA +D +
Sbjct: 295 EGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE 338
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 188 I-VD---GMLKLIDFGIANQMQ 205
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 135 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 190
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 191 --GMLKLIDFGIANQMQ 205
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K+LG+G FG V + + G Y MK+ +++ V+ + EH +
Sbjct: 48 KTLGTGSFGRVM-----LVKHMETGNHYAMKI--------LDKQKVVKLKQIEH--TLNE 92
Query: 563 EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
++ L+ + P ++ + N N Y + + G ++ L F + + +
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP-GGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ + EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
+ EY+H ++ DLKP N+++ Q + + DFG A R K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK 193
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 188 I-VD---GMLKLIDFGIANQMQ 205
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 135 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 190
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 191 --GMLKLIDFGIANQMQ 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 56
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 57 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 113
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 114 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 157
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 170
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 227
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 228 EYDF---PEKFF 236
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 188 I-VD---GMLKLIDFGIANQMQ 205
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 135 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 190
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 191 --GMLKLIDFGIANQMQ 205
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 81 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 140
Query: 646 LGVDSSQAIVNIVDFGLASR 665
+ VD ++ ++DFG+A++
Sbjct: 141 I-VD---GMLKLIDFGIANQ 156
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 12/75 (16%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 88 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 143
Query: 55 SQAIVNIVDFGLASR 69
++ ++DFG+A++
Sbjct: 144 --GMLKLIDFGIANQ 156
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 38/191 (19%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 55
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLL 604
PE L+ + KKL+ L YA+ ++ +I+I GS L L
Sbjct: 56 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTDDNHK 674
+D + +
Sbjct: 162 RLIEDNEXTAR 172
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+ Y+ YVH DL+ AN+L+G + + DFGLA +D + +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEXTAR 172
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 84 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 143
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 144 I-VD---GMLKLIDFGIANQMQ 161
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 91 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 146
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 147 --GMLKLIDFGIANQMQ 161
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++ LG G +G V SAT V + K+E PLF + L
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVA----IKKIEPFDKPLFALRT----------LR 58
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSL 612
K K K + T + ++ + +II +DL Q L D+H ++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
TL +++ +H +H DLKP+N+L+ +S + + DFGL
Sbjct: 119 YQTLR-------AVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGL---------- 158
Query: 673 HKAHIVEKKSAHNGE 687
A I+++ +A N E
Sbjct: 159 --ARIIDESAADNSE 171
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+++ + L +++ +H +H DLKP+N+L+ +S + + DFGLA
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLA 159
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 100 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 160 I-VD---GMLKLIDFGIANQMQ 177
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 107 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 162
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 163 --GMLKLIDFGIANQMQ 177
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 583 HNGNSYRFII--ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
++ Y +++ + K G L K+L + K FS + + ++ ++EY+H G VH DLK
Sbjct: 85 YDDGKYVYVVTELXKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 641 PANVLLGVDSSQ--AIVNIVDFGLASRYK 667
P+N+L VD S + I DFG A + +
Sbjct: 144 PSNILY-VDESGNPESIRICDFGFAKQLR 171
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHKA 79
VL ++EY+H G VH DLKP+N+L VD S + I DFG A + + +
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLRAENG---- 175
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT-AYEQQPEK 138
+ + + ++ +G I + +L Y L TG P+ + PE+
Sbjct: 176 --LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL---TGYTPFANGPDDTPEE 230
Query: 139 VLA 141
+LA
Sbjct: 231 ILA 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++ LG G +G V SAT V + K+E PLF + L
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVA----IKKIEPFDKPLFALRT----------LR 58
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSL 612
K K K + T + ++ + +II +DL Q L D+H ++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
TL +++ +H +H DLKP+N+L+ +S + + DFGL
Sbjct: 119 YQTLR-------AVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGL---------- 158
Query: 673 HKAHIVEKKSAHNGE 687
A I+++ +A N E
Sbjct: 159 --ARIIDESAADNSE 171
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+++ + L +++ +H +H DLKP+N+L+ +S + + DFGLA
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLA 159
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 28/164 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG+G F EV A D V ++C E LE +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLV----------------------AIKCIAKEALEGKEGSM 63
Query: 565 K-----LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIG 619
+ L + P A+ E G+ Y + + G +++ E ++ ++ +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLI 122
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 523 NKVDGYKYVMKV-EYSTGPLFVEQNFYVRCAKPEHLEAWKKEKKL--KTLGLPTFYAMKG 579
++ G+++ +K+ E + L EQ VR EA ++E + + G P +
Sbjct: 115 HRATGHEFAVKIMEVTAERLSPEQLEEVR-------EATRRETHILRQVAGHPHIITLID 167
Query: 580 QQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHAD 638
E +S+ F++ +L L E S K T +I SLL+++ ++H VH D
Sbjct: 168 SYE--SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRD 225
Query: 639 LKPANVLLGVDSSQAIVNIVDFGLA 663
LKP N+LL D+ Q + + DFG +
Sbjct: 226 LKPENILLD-DNMQ--IRLSDFGFS 247
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
R ++R L+++ ++H VH DLKP N+LL D+ Q + + DFG +
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLD-DNMQ--IRLSDFGFS 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 31/132 (23%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHKA 79
VL ++EY+H G VH DLKP+N+L VD S + I DFG A + +
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLR-------- 171
Query: 80 HIVEKKSAHNGTLI---YTS------LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
A NG L+ YT+ ++ +G I + +L Y +L TG P+
Sbjct: 172 -------AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML---TGYTPFA 221
Query: 131 -AYEQQPEKVLA 141
+ PE++LA
Sbjct: 222 NGPDDTPEEILA 233
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 583 HNGNSYRFII--ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
++ Y +++ + K G L K+L + K FS + + ++ ++EY+H G VH DLK
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 641 PANVLLGVDSSQ--AIVNIVDFGLASRYK 667
P+N+L VD S + I DFG A + +
Sbjct: 144 PSNILY-VDESGNPESIRICDFGFAKQLR 171
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 53
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 54 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 110
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 111 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 154
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 167
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 224
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 225 EYDF---PEKFF 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 55
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 56 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 112
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 113 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 156
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 169
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 226
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 227 EYDF---PEKFF 235
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 80 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 139
Query: 646 LGVDSSQAIVNIVDFGLASRYK 667
+ VD ++ ++DFG+A++ +
Sbjct: 140 I-VD---GMLKLIDFGIANQMQ 157
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 87 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 142
Query: 55 SQAIVNIVDFGLASRYK 71
++ ++DFG+A++ +
Sbjct: 143 --GMLKLIDFGIANQMQ 157
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 190
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
A GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 247
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 248 EYDF---PEKFF 256
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 76
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 77 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 133
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 177
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 55
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLL 604
PE L+ + KKL+ L YA+ ++ +I+I GS L L
Sbjct: 56 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTD 670
+D +
Sbjct: 162 RLIEDNE 168
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++ LG G +G V SAT V + K+E PLF + L
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVA----IKKIEPFDKPLFALRT----------LR 58
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL------QKLLDEHKEFSL 612
K K K + T + ++ + +II +DL Q L D+H ++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
TL +++ +H +H DLKP+N+L+ +S + + DFGL
Sbjct: 119 YQTLR-------AVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGL---------- 158
Query: 673 HKAHIVEKKSAHNGE 687
A I+++ +A N E
Sbjct: 159 --ARIIDESAADNSE 171
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+++ + L +++ +H +H DLKP+N+L+ +S + + DFGLA
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLA 159
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R V R + ++ Y+H GY H DLKP N+L + ++DFGL ++ K D H
Sbjct: 111 RVVFRQIVSAVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQ 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKV 139
G+L Y + +G D+ + L L G LP+ + V
Sbjct: 168 TCC-------GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF-----DDDNV 215
Query: 140 LAMKEELLK 148
+A+ +++++
Sbjct: 216 MALYKKIMR 224
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L + S + T + ++ ++ Y+H GY H DLKP N+L +
Sbjct: 92 GGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF---DEYHKLK 148
Query: 657 IVDFGLASRYKDTDDNH 673
++DFGL ++ K D H
Sbjct: 149 LIDFGLCAKPKGNKDYH 165
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFW-CSYVDAA 710
+ + + L R+ + V W C V A
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMX---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 28/164 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG+G F EV A D V ++C E LE +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLV----------------------AIKCIAKEALEGKEGSM 63
Query: 565 K-----LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIG 619
+ L + P A+ E G+ Y + + G +++ E ++ ++ +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLI 122
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 586 NSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+ Y ++++ DL L + K + ++L+++ IH G VH+DLKPAN L
Sbjct: 100 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 646 LGVDSSQAIVNIVDFGLASR 665
+ VD ++ ++DFG+A++
Sbjct: 160 I-VD---GMLKLIDFGIANQ 175
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 12/75 (16%)
Query: 1 MTEGIVDM-TWTNATQNV--WLR---WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDS 54
M G +D+ +W +++ W R W + L+++ IH G VH+DLKPAN L+ VD
Sbjct: 107 MECGNIDLNSWLKKKKSIDPWERKSYW--KNMLEAVHTIHQHGIVHSDLKPANFLI-VD- 162
Query: 55 SQAIVNIVDFGLASR 69
++ ++DFG+A++
Sbjct: 163 --GMLKLIDFGIANQ 175
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 54
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 55 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 111
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 112 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 155
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 168
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 225
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 226 EYDF---PEKFF 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P +K G+++ + + + LGSG FG V+ VE +TG +
Sbjct: 41 PVEVKQGSVY-----DYYDILEELGSGAFGVVHRC-----------------VEKATGRV 78
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GS 598
FV + ++ P L+ + + ++ + + + + Y ++I +F G
Sbjct: 79 FVAK--FINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE 134
Query: 599 DLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
++ E + S + + L+++H VH D+KP N++ + + V I+
Sbjct: 135 LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKII 193
Query: 659 DFGLASR 665
DFGLA++
Sbjct: 194 DFGLATK 200
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
+R A + L+++H VH D+KP N++ + + V I+DFGLA++
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATK 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 2 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 52
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 53 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLK 97
Query: 605 DE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 98 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 154
Query: 664 SRYKDTD 670
+D +
Sbjct: 155 RLIEDNE 161
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 119 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 161
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFY 548
A+ V S K ++ LG G F VY A D N N++ K + S + +
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRT-- 58
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
A ++ K L+ L P + H N ++ +DL+ ++ +
Sbjct: 59 ----------ALREIKLLQELSHPNIIGLLDAFGHKSNIS--LVFDFMETDLEVIIKD-- 104
Query: 609 EFSLKNTLTIGSS--------LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 660
N+L + S L LEY+H +H DLKP N+LL ++ + DF
Sbjct: 105 -----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADF 156
Query: 661 GLASRYKDTDDNHKAHIVEK 680
GLA + + + +V +
Sbjct: 157 GLAKSFGSPNRAYXHQVVTR 176
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 25 LALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+ L LEY+H +H DLKP N+LL ++ + DFGLA + + + +V +
Sbjct: 120 MTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
+ GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 249
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 250 EYDF---PEKFF 258
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFW-CSYVDAA 710
+ + + L R+ + V W C V A
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMX---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
LL SL YIH G H D+KP N+LL D ++ ++DFG A
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L SL YIH G H D+KP N+LL D ++ ++DFG A
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 30/219 (13%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+ KKE + K L G + Y F+ G +L ++ +
Sbjct: 51 I---KKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDA 106
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ N++
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRE 160
Query: 676 HIVEKKSA---HNGESCLSLRKLFMQKVAFW-CSYVDAA 710
++ K + L R+ + V W C V A
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 28/164 (17%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG+G F EV A D V ++C E LE +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLV----------------------AIKCIAKEALEGKEGSM 63
Query: 565 K-----LKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIG 619
+ L + P A+ E G+ Y + + G +++ E ++ ++ +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLI 122
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+S+ +IH VH DLKP N+LL A V + DFGLA
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+S+ +IH VH DLKP N+LL A V + DFGLA
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 19/168 (11%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+K++ + LGSG F EV+ + ++ G + +K P F + +
Sbjct: 8 RKTFIFMEVLGSGAFSEVF-----LVKQRLTGKLFALKC-IKKSPAFRDSSL------EN 55
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+ KK K + L Y + Y ++ G +L + E ++ K+
Sbjct: 56 EIAVLKKIKHENIVTLEDIY-------ESTTHYYLVMQLVSGGELFDRILERGVYTEKDA 108
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L +++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 109 SLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
V++ L +++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++ +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRE 160
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFW-CSYVDAA 710
+ + + L R+ + V W C V A
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 199
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMX---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 59
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 60 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTD 670
+D +
Sbjct: 162 RLIEDNE 168
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 82
L AL+ LEY+H +H D+K NVLL D S+A + DFG A +
Sbjct: 170 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA--LCDFGHALCLQPDGLG------ 221
Query: 83 EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYN----LLHLNTGSLPWTAYEQQP 136
KS G I + + CD ++ ++ +LH+ G PWT Y + P
Sbjct: 222 --KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 30/161 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV+ D K G++ +K VR LE ++ E+
Sbjct: 80 LGRGSFGEVHRMKD-----KQTGFQCAVK--------------KVR------LEVFRVEE 114
Query: 565 KLKTLGL--PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
+ GL P + G F+ + + GS L +L+ + L
Sbjct: 115 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS-LGQLIKQMGCLPEDRALYYLGQA 173
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L+ LEY+H +H D+K NVLL D S+A + DFG A
Sbjct: 174 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAA--LCDFGHA 212
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 82
L AL+ LEY+H +H D+K NVLL D S+A + DFG A +
Sbjct: 172 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA--LCDFGHALCLQPDGLG------ 223
Query: 83 EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYN----LLHLNTGSLPWTAYEQQP 136
KS G I + + CD ++ ++ +LH+ G PWT Y + P
Sbjct: 224 --KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G L +L+ + L L+ LEY+H +H D+K NVLL D S+A
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA-- 207
Query: 657 IVDFGLA 663
+ DFG A
Sbjct: 208 LCDFGHA 214
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 76
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 77 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 133
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 177
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 190
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 247
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 248 EYDF---PEKFF 256
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 82
L AL+ LEY+H +H D+K NVLL D S+A + DFG A +
Sbjct: 156 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA--LCDFGHALCLQPDGLG------ 207
Query: 83 EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYN----LLHLNTGSLPWTAYEQQP 136
KS G I + + CD ++ ++ +LH+ G PWT Y + P
Sbjct: 208 --KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G L +L+ + L L+ LEY+H +H D+K NVLL D S+A
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAA-- 191
Query: 657 IVDFGLA 663
+ DFG A
Sbjct: 192 LCDFGHA 198
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 76
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 77 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 133
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 177
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 190
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 247
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 248 EYDF---PEKFF 256
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 60
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 61 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 117
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 118 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 161
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 124 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 174
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 231
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 232 EYDF---PEKFF 240
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 572 PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHH 631
P +K + + Y + + G L K+L + K FS + + ++ ++EY+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLHTIGKTVEYLHS 139
Query: 632 CGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYK 667
G VH DLKP+N+L VD S + I DFG A + +
Sbjct: 140 QGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLR 176
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHK 78
+VL ++EY+H G VH DLKP+N+L VD S + I DFG A + + +
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENG--- 180
Query: 79 AHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT-AYEQQPE 137
+ + + ++ +G I + IL Y +L G P+ PE
Sbjct: 181 ---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML---AGYTPFANGPSDTPE 234
Query: 138 KVLA 141
++L
Sbjct: 235 EILT 238
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S K+ K LG+G FGEV+ + N KV K + S E N
Sbjct: 12 RESIKLVKRLGAGQFGEVWMGYYN-NSTKV-AVKTLKPGTMSVQAFLEEANLM------- 62
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL-LDEHKEFS 611
K L+ L YA+ ++E II+++ GS L L DE +
Sbjct: 63 --------KTLQHDKLVRLYAVVTREEP------IYIITEYMAKGSLLDFLKSDEGGKVL 108
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L + + + + + YI Y+H DL+ ANVL+ S + I DFGLA +D +
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE 164
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + YI Y+H DL+ ANVL+ S + I DFGLA +D +
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE 164
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 78
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 79 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 135
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 249
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 250 EYDF---PEKFF 258
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+++ + H G VH DLKP N+LL A V + DFGLA
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++ + H G VH DLKP N+LL A V + DFGLA
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S K+ K LG+G FGEV+ AT N + K + S E N
Sbjct: 181 RESLKLEKKLGAGQFGEVWMAT--YNKHTKVAVKTMKPGSMSVEAFLAEANVM------- 231
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL-LDEHKEFS 611
K L+ L +A+ ++ II++F GS L L DE +
Sbjct: 232 --------KTLQHDKLVKLHAVVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + + + + + +I Y+H DL+ AN+L+ S+ + I DFGLA
Sbjct: 277 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLA 325
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ + +I Y+H DL+ AN+L+ S+ + I DFGLA
Sbjct: 289 EGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLA 325
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 26 ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKK 85
L+++ + H+CG +H D+K N+L +D ++ + ++DFG + KDT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDT----------VY 213
Query: 86 SAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ 134
+ +GT +Y+ + HR ++ + + IL Y+++ G +P+ E+
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---CGDIPFEHDEE 262
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 590 FIIISKFGSDLQKLLD---EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLL 646
F++I + +Q L D E + + +L+++ + H+CG +H D+K N+L
Sbjct: 131 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL- 189
Query: 647 GVDSSQAIVNIVDFGLASRYKDT 669
+D ++ + ++DFG + KDT
Sbjct: 190 -IDLNRGELKLIDFGSGALLKDT 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 56
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 57 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMNKGSLLDFLK 101
Query: 605 DE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 102 GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 158
Query: 664 SRYKDTD 670
+D +
Sbjct: 159 RLIEDNE 165
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 123 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 165
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 79
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 80 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 136
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 180
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 193
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 250
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 251 EYDF---PEKFF 259
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 78
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 79 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 135
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 249
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 250 EYDF---PEKFF 258
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 56
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 57 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMNKGSLLDFLK 101
Query: 605 DE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 102 GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 158
Query: 664 SRYKDTD 670
+D +
Sbjct: 159 RLIEDNE 165
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 123 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 165
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 73
+L+ L L+Y+H +H D+K ANVLL S Q V + DFG+A + DT
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT 173
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
T+ +L L+Y+H +H D+K ANVLL S Q V + DFG+A + DT
Sbjct: 124 TMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT 173
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKV------EYSTGPLFVEQNFYVRCAKP-- 554
+ LG GGFG V+ A NKVD Y +K E + + E + P
Sbjct: 11 QCLGRGGFGVVFEAK-----NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 555 -EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLD-----EH 607
+ AW ++ + L Q + Y +I + +L+ ++ E
Sbjct: 66 VRYFNAWLEKNTTEKL-----------QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
+E S+ L I + +++E++H G +H DLKP+N+ +D +V + DFGL +
Sbjct: 115 RERSV--CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVT 166
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 15 QNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
++V L L++A +++E++H G +H DLKP+N+ +D +V + DFGL + D D
Sbjct: 117 RSVCLHIFLQIA-EAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAM-DQD 171
Query: 75 DNHKAHIV-----EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHL 122
+ + + + + GT +Y S G + ++ DI L L L
Sbjct: 172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV-DIFSLGLILFEL 223
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 40/188 (21%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 221
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL 603
PE L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 222 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFL 269
Query: 604 LDE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL 326
Query: 663 ASRYKDTD 670
A +D +
Sbjct: 327 ARLIEDNE 334
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 334
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMK-VEYSTGPLFVEQNFYVRCAKPEHLE----- 558
+GSGGFG+V+ A +++DG YV++ V+Y+ E AK +H+
Sbjct: 20 IGSGGFGQVFKAK-----HRIDGKTYVIRRVKYNNEKAEREVK---ALAKLDHVNIVHYN 71
Query: 559 -AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYR-----FIIISKF--GSDLQKLLDEHKEF 610
W + + E++ NS R I +F L++ +++ +
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 611 SLKNTLTIG--SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
L L + + ++YIH +H DLKP+N+ L VD+ Q V I DFGL + K+
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQ--VKIGDFGLVTSLKN 188
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 10 WTNATQNVWLRWVLRLAL-----DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 64
W + L VL L L ++YIH +H DLKP+N+ L VD+ Q V I DF
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQ--VKIGDF 180
Query: 65 GLASRYKDTDDNHKAHIVEKKSAHNGTLIYTS 96
GL + K+ K++ GTL Y S
Sbjct: 181 GLVTSLKNDG---------KRTRSKGTLRYMS 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 79
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 80 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 136
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 180
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 193
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
+ GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 250
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 251 EYDF---PEKFF 259
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 78
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 79 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 135
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 249
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 250 EYDF---PEKFF 258
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L+ L+Y+H VH D+K NVL +++ ++ I DFG + R A I
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKRL--------AGINPCTE 167
Query: 87 AHNGTLIYTS-LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE-QQPE------- 137
GTL Y + + +G + + DI L ++ + TG P+ YE +P+
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAMFKVG 225
Query: 138 --KVLAMKEELLKDPAKFFTTHYKEPVPD 164
KV E + AK F EP PD
Sbjct: 226 MFKVHPEIPESMSAEAKAFILKCFEPDPD 254
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 614 NTLTIG---SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
N TIG +L+ L+Y+H VH D+K NVL +++ ++ I DFG + R
Sbjct: 106 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKR 158
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 40/188 (21%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 221
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL 603
PE L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 222 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFL 269
Query: 604 LDE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL 326
Query: 663 ASRYKDTD 670
A +D +
Sbjct: 327 ARLIEDNE 334
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 334
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 76 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 132
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 176
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 189
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 246
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 247 EYDF---PEKFF 255
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 49
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 50 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 102
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 154
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 118 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 168
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 81
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 82 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 138
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 139 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 182
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 145 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 195
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 252
Query: 143 KEELLKDPAKFF 154
+ + PA FF
Sbjct: 253 EYDF---PAAFF 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 59
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I+ ++ GS L L
Sbjct: 60 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVCEYMSKGSLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTD 670
+D +
Sbjct: 162 RLIEDNE 168
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 76 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 132
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 176
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 189
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
+ GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 246
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 247 EYDF---PEKFF 255
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 572 PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHH 631
P A+ E G+ Y + + G +++ E ++ ++ + +LD+++Y+H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 632 CGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
G VH DLKP N+L + + I DFGL+
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
LD+++Y+H G VH DLKP N+L + + I DFGL+
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 572 PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHH 631
P +K + + Y + + G L K+L + K FS + + ++ ++EY+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLHTIGKTVEYLHS 139
Query: 632 CGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYK 667
G VH DLKP+N+L VD S + I DFG A + +
Sbjct: 140 QGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLR 176
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQ--AIVNIVDFGLASRYKDTDDNHK 78
+VL ++EY+H G VH DLKP+N+L VD S + I DFG A + +
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLR------- 176
Query: 79 AHIVEKKSAHNGTLI---YTS------LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
A NG L+ YT+ ++ +G I + IL Y +L G P+
Sbjct: 177 --------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML---AGYTPF 225
Query: 130 T-AYEQQPEKVLA 141
PE++L
Sbjct: 226 ANGPSDTPEEILT 238
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 78
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 79 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 135
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLL 120
GT Y S L+ + A +S + + + Y L+
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLV 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 78
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 79 VT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 135
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 179
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 192
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLL 120
GT Y S L+ + A +S + + + Y L+
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S ++ LG G FGEV+ T +G V G + E
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA---------- 49
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLLDE-HKEFS 611
L+ + KKL+ L YA+ ++ I++++ GS L L E K
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IXIVTEYMSKGSLLDFLKGETGKYLR 102
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 103 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEX 159
Query: 672 NHK 674
+
Sbjct: 160 TAR 162
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+ Y+ YVH DL+ AN+L+G + + DFGLA +D + +
Sbjct: 116 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEXTAR 162
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ R L++L YIH G +H DLKP N+ +D S+ V I DFGLA
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIF--IDESRN-VKIGDFGLA 163
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L YIH G +H DLKP N+ +D S+ V I DFGLA
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIF--IDESRN-VKIGDFGLA 163
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ R L++L YIH G +H DLKP N+ +D S+ V I DFGLA
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIF--IDESRN-VKIGDFGLA 163
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L YIH G +H DLKP N+ +D S+ V I DFGLA
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIF--IDESRN-VKIGDFGLA 163
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 82
L AL+ LEY+H +H D+K NVLL D S A + DFG A +
Sbjct: 172 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAA--LCDFGHAVCLQPDGLG------ 223
Query: 83 EKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYN----LLHLNTGSLPWTAYEQQP 136
K G I + R CD ++ ++ +LH+ G PWT + + P
Sbjct: 224 --KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 30/161 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FGEV+ D K G++ +K VR LE ++ E+
Sbjct: 82 LGRGSFGEVHRMED-----KQTGFQCAVK--------------KVR------LEVFRAEE 116
Query: 565 KLKTLGL--PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSL 622
+ GL P + G F+ + + GS L +L+ E L
Sbjct: 117 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS-LGQLVKEQGCLPEDRALYYLGQA 175
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L+ LEY+H +H D+K NVLL D S A + DFG A
Sbjct: 176 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAA--LCDFGHA 214
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L +LE++H +H D+K N+LLG+D S V + DFG ++
Sbjct: 122 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQ 166
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 682
L +LE++H +H D+K N+LLG+D S V + DFG ++ + + ++ +V
Sbjct: 127 LQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQIT-PEQSKRSXMVGTPY 182
Query: 683 AHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITISTLIYTSLVAHRG 729
E + RK + KV W ++ P Y+ + L L+A G
Sbjct: 183 WMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L +LE++H +H D+K N+LLG+D S V + DFG ++
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQ 165
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 682
L +LE++H +H D+K N+LLG+D S V + DFG ++ + + ++ +V
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQIT-PEQSKRSXMVGTPY 181
Query: 683 AHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITISTLIYTSLVAHRG 729
E + RK + KV W ++ P Y+ + L L+A G
Sbjct: 182 WMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 590 FIIISKFGSDLQKLLDE--HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
++++ +Q++LD K F + L+D LEY+H G VH D+KP N+LL
Sbjct: 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL- 142
Query: 648 VDSSQAIVNIVDFGLA 663
++ + I G+A
Sbjct: 143 --TTGGTLKISALGVA 156
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 14/154 (9%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+D LEY+H G VH D+KP N+LL ++ + I G+A + +
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKVLAMKEEL 146
A I L G K DI L ++ TG P+ + + + E +
Sbjct: 176 AFQPPEIANGLDTFSGFKV-----DIWSAGVTLYNITTGLYPFEG-----DNIYKLFENI 225
Query: 147 LKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEV 180
K + P+ D+ M +Y + +F +
Sbjct: 226 GKG-SYAIPGDCGPPLSDLLKGMLEYEPAKRFSI 258
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L +LE++H +H D+K N+LLG+D S V + DFG ++
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQ 165
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 682
L +LE++H +H D+K N+LLG+D S V + DFG ++ + + ++ +V
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQIT-PEQSKRSEMVGTPY 181
Query: 683 AHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITISTLIYTSLVAHRG 729
E + RK + KV W ++ P Y+ + L L+A G
Sbjct: 182 WMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 308
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 309 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLK 353
Query: 605 DE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + + DFGLA
Sbjct: 354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLA 410
Query: 664 SRYKDTD 670
+D +
Sbjct: 411 RLIEDNE 417
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + + DFGLA +D +
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNE 417
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 40/188 (21%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 55
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL 603
PE L+ + KK++ L YA+ ++ I++++ GS L L
Sbjct: 56 -----SPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFL 103
Query: 604 LDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGL
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL 160
Query: 663 ASRYKDTD 670
A +D +
Sbjct: 161 ARLIEDNE 168
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L +LE++H +H D+K N+LLG+D S V + DFG ++
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQ 165
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 682
L +LE++H +H D+K N+LLG+D S V + DFG ++ + + ++ +V
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQIT-PEQSKRSTMVGTPY 181
Query: 683 AHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITISTLIYTSLVAHRG 729
E + RK + KV W ++ P Y+ + L L+A G
Sbjct: 182 WMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++V K +G G FG+V A D +KV + + V E+ F+ + A
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYD----HKVHQHVALKMVRN-------EKRFHRQAA 141
Query: 553 KP----EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
+ EHL K+ + + + + + N F ++S +L +L+ ++K
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFR-----NHICMTFELLS---MNLYELIKKNK 193
Query: 609 --EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
FSL S+L L+ +H +H DLKP N+LL I ++DFG
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFG 247
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQA 57
++ + ++ N Q L V + A L L+ +H +H DLKP N+LL
Sbjct: 181 LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG 240
Query: 58 IVNIVDFG 65
I ++DFG
Sbjct: 241 I-KVIDFG 247
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 40/188 (21%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 221
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL 603
PE L+ + KKL+ L YA+ ++ I+ ++ GS L L
Sbjct: 222 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVGEYMSKGSLLDFL 269
Query: 604 LDE-HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGL
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL 326
Query: 663 ASRYKDTD 670
A +D +
Sbjct: 327 ARLIEDNE 334
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 334
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 177
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 190
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 247
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 248 EYDF---PEKFF 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S ++ LG G FGEV+ T +G V G + E
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA---------- 48
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLLDEH-KEFS 611
L+ + KKL+ L YA+ ++ I++++ GS L L E K
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLR 101
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 102 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 157
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 115 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 157
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 590 FIIISKFGSDLQKLL-DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
+++ +DL +++ D+ S ++ +L L +H G VH DL P N+LL
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 649 DSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCS 705
++ + I DF LA +DT D +K H V + E + K F + V W +
Sbjct: 170 NND---ITICDFNLAR--EDTADANKTHYVTHRWYRAPELVMQF-KGFTKLVDMWSA 220
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++ + L L +H G VH DL P N+LL ++ + I DF LA +DT D +K
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAR--EDTADANK 190
Query: 79 AHIVEKK 85
H V +
Sbjct: 191 THYVTHR 197
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ +K GK LG G F V A + + Y +K+ +E+ ++ K +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKI--------LEKRHIIKENKVPY 83
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
+ ++ + L P F + + + Y + +K G +L K + + F T
Sbjct: 84 VT--RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTR 140
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ ++ +LEY+H G +H DLKP N+LL D + I DFG A
Sbjct: 141 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTA 184
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
+ +LEY+H G +H DLKP N+LL D + I DFG A +A +
Sbjct: 147 VSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARA------N 197
Query: 87 AHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQP--EKVLAM 142
GT Y S L+ + A +S + + + Y L+ G P+ A + +K++ +
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV---AGLPPFRAGNEYLIFQKIIKL 254
Query: 143 KEELLKDPAKFF 154
+ + P KFF
Sbjct: 255 EYDF---PEKFF 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++S ++ LG G FGEV+ T +G V G + E
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA---------- 50
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLLDEH-KEFS 611
L+ + KKL+ L YA+ ++ I++++ GS L L E K
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLR 103
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 104 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 159
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 117 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 159
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L SL YIH G H D+KP N+LL D+ A++ + DFG A
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSA 204
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++ + SL YIH G H D+KP N+LL D+ A++ + DFG A
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSA 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 590 FIIISKFGSDLQKLL-DEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
+++ +DL +++ D+ S ++ +L L +H G VH DL P N+LL
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 649 DSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCS 705
++ + I DF LA +DT D +K H V + E + K F + V W +
Sbjct: 170 NND---ITICDFNLAR--EDTADANKTHYVTHRWYRAPELVMQF-KGFTKLVDMWSA 220
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+++ + L L +H G VH DL P N+LL ++ + I DF LA +DT D +K
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAR--EDTADANK 190
Query: 79 AHIVEKK 85
H V +
Sbjct: 191 THYVTHR 197
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 208
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++ + SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 204
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++ + SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 204
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 200
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 200
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++V K +G G FG+V A D +KV + + V E+ F+ + A
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYD----HKVHQHVALKMVRN-------EKRFHRQAA 141
Query: 553 KP----EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
+ EHL K+ + + + + + N F ++S +L +L+ ++K
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFR-----NHICMTFELLS---MNLYELIKKNK 193
Query: 609 --EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
FSL S+L L+ +H +H DLKP N+LL I ++DFG
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFG 247
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQA 57
++ + ++ N Q L V + A L L+ +H +H DLKP N+LL
Sbjct: 181 LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG 240
Query: 58 IVNIVDFG 65
I ++DFG
Sbjct: 241 I-KVIDFG 247
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 206
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++ + SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
++ LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 249
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++ + SL YIH G H D+KP N+LL D A++ + DFG A
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSA 249
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+++ + H G VH DLKP N+LL A V + DFGLA
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++ + H G VH DLKP N+LL A V + DFGLA
Sbjct: 131 LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G + E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEA-- 59
Query: 548 YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKLL 604
L+ + KKL+ L YA+ ++ I++++ GS L L
Sbjct: 60 --------FLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTD 670
+D +
Sbjct: 162 RLIEDNE 168
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLAAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++V K +G G FG+V A D +KV + + V E+ F+ + A
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAYD----HKVHQHVALKMVRN-------EKRFHRQAA 141
Query: 553 KP----EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
+ EHL K+ + + + + + N F ++S +L +L+ ++K
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFR-----NHICMTFELLS---MNLYELIKKNK 193
Query: 609 --EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
FSL S+L L+ +H +H DLKP N+LL I ++DFG
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFG 247
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 1 MTEGIVDMTWTNATQNVWLRWVLRLA---LDSLEYIHHCGYVHADLKPANVLLGVDSSQA 57
++ + ++ N Q L V + A L L+ +H +H DLKP N+LL
Sbjct: 181 LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG 240
Query: 58 IVNIVDFG 65
I ++DFG
Sbjct: 241 I-KVIDFG 247
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 184
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 184
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
++ LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
++ LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 191
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 191
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
++ LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 177
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 177
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 180
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 180
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 184
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 184
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 5 IVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 64
++ T N + W+ ++ R L L ++H +H D+K NVLL + A V +VDF
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDF 173
Query: 65 GLASRYKDT 73
G++++ T
Sbjct: 174 GVSAQLDRT 182
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
I +L L ++H +H D+K NVLL + A V +VDFG++++ T
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRT 182
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 185
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 185
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 40/188 (21%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 55
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GSDLQKL 603
PE L+ + KKL+ L YA+ ++ I++++ G L L
Sbjct: 56 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGCLLDFL 103
Query: 604 LDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGL
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGL 160
Query: 663 ASRYKDTD 670
A +D +
Sbjct: 161 ARLIEDNE 168
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI-- 654
G +L L + + S + + +LD + Y+H H DLKP N++L +D + I
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPH 157
Query: 655 VNIVDFGLASRYKD 668
+ ++DFGLA +D
Sbjct: 158 IKLIDFGLAHEIED 171
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAI--VNIVDFGLASRYKD 72
++ LD + Y+H H DLKP N++L +D + I + ++DFGLA +D
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIED 171
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
L SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
++++ + SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 176
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 126 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 176
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 173
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 173
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
L SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
++++ + SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 50/193 (25%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T + +V
Sbjct: 176 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT----------WNGTTRVA------------ 213
Query: 548 YVRCAKPEHL--EAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF---GS 598
++ KP ++ EA+ +E KKL+ L YA+ ++ I++++ GS
Sbjct: 214 -IKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGS 265
Query: 599 DLQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
L L E K L + + + + + Y+ YVH DL+ AN+L+G + +
Sbjct: 266 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKV 322
Query: 658 VDFGLASRYKDTD 670
DFGL +D +
Sbjct: 323 ADFGLGRLIEDNE 335
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGL +D +
Sbjct: 293 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLGRLIEDNE 335
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
L SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
++++ + SL YIH G H D+KP N+LL D A++ + DFG A + + N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 13 PEEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQ 601
K E L + ++ L P M G E S+ ++ L
Sbjct: 72 -----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLN 115
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFG
Sbjct: 116 KYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFG 172
Query: 662 LASRYKDTDDNHKAH 676
L+ + ++ +KA
Sbjct: 173 LSKALRADENYYKAQ 187
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 139 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 187
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 13 PEEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQ 601
K E L + ++ L P M G E S+ ++ L
Sbjct: 72 -----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLN 115
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFG
Sbjct: 116 KYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFG 172
Query: 662 LASRYKDTDDNHKAH 676
L+ + ++ +KA
Sbjct: 173 LSKALRADENYYKAQ 187
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 139 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 187
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
L SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 17 VWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++++ + SL YIH G H D+KP N+LL D A++ + DFG A +
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 481 LPDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGP 540
L DP F D +K + + +G G FG VY A D N V + K+ YS
Sbjct: 38 LKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVA----IKKMSYSG-- 91
Query: 541 LFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKG--QQEHNGNSYRFIIISKFGS 598
+ + + + K+ + L+ L P +G +EH ++++
Sbjct: 92 ---------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA----WLVMEYCLG 138
Query: 599 DLQKLLDEHKE-FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
LL+ HK+ + L L Y+H +H D+K N+LL S +V +
Sbjct: 139 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKL 195
Query: 658 VDFGLAS 664
DFG AS
Sbjct: 196 GDFGSAS 202
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 15 QNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
Q V + V AL L Y+H +H D+K N+LL S +V + DFG AS
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSAS 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
V + LG G +G VY A ++ K V VE + E + +C P ++ +
Sbjct: 33 VLEKLGEGSYGSVYKAIHK-ETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGS 620
K L + Y G SD+ +L +K + TI
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSV----------------SDIIRL--RNKTLTEDEIATILQ 132
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
S L LEY+H +H D+K N+LL +++ + DFG+A + D
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTD 177
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+L+ L LEY+H +H D+K N+LL +++ + DFG+A + D
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTD 177
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
K+ K + LG G FG+V D ND TG + + C P
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDG--------------TGEMVAVKALKEGCG-P 52
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKEFS 611
+ W++E + L+TL KG E G +++ GS L+ L H
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS-LRDYLPRHC-VG 110
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L L + + + Y+H Y+H L NVLL D +V I DFGLA
Sbjct: 111 LAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLA 159
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ + Y+H Y+H L NVLL D +V I DFGLA
Sbjct: 123 EGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLA 159
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKP 554
K+ K + LG G FG+V D ND TG + + C P
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDG--------------TGEMVAVKALKEGCG-P 51
Query: 555 EHLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKEFS 611
+ W++E + L+TL KG E G +++ GS L+ L H
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS-LRDYLPRHC-VG 109
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L L + + + Y+H Y+H L NVLL D +V I DFGLA
Sbjct: 110 LAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLA 158
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ + Y+H Y+H L NVLL D +V I DFGLA
Sbjct: 122 EGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLA 158
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G +GEV A + V + V +K+ V+ V C PE+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 51
Query: 557 LEAWKKEKKLKTL----GLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE + + + FY G + Y F+ G +L ++
Sbjct: 52 I---KKEICINAMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 104
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 156
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 170
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 36/186 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+ ++VG LGSGGFG VYS V+DN K+V K +
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIR-VSDNLPVAIKHVEK---------------------D 40
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNG---------NSYRFIIISKFGSDLQKLLDE 606
+ W + + + K +G F++I + +Q L D
Sbjct: 41 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 100
Query: 607 HKEFSLKNTLTIGSSLLDSLEYIHHC---GYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E S LE + HC G +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 664 SRYKDT 669
+ KDT
Sbjct: 159 ALLKDT 164
Score = 36.6 bits (83), Expect = 0.061, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+T A Q R L+++ + H+ G +H D+K N+L +D ++ + ++DFG
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENIL--IDLNRGELKLIDFGSG 158
Query: 68 SRYKDTDDNHKAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNT 124
+ KDT + +GT +Y+ + HR ++ + + IL Y+++
Sbjct: 159 ALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---C 205
Query: 125 GSLPWTAYEQ 134
G +P+ E+
Sbjct: 206 GDIPFEHDEE 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLXQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 68
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 69 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLXQVI--QMELDHERMS 122
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 166
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 166
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+R L++L Y H +H D+KP NVLL + A V + DFG+A
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L Y H +H D+KP NVLL + A V + DFG+A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 11 PEEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 69
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQ 601
K E L + ++ L P M G E S+ ++ L
Sbjct: 70 -----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLN 113
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFG
Sbjct: 114 KYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFG 170
Query: 662 LASRYKDTDDNHKAH 676
L+ + ++ +KA
Sbjct: 171 LSKALRADENYYKAQ 185
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 137 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 185
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D Q + ++D+GLA Y
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 188
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D Q + ++D+GLA Y
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 188
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKXVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLXQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 25/185 (13%)
Query: 483 DPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLF 542
DP F D +K + + +G G FG VY A D N V + K+ YS
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVA----IKKMSYSG---- 52
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKG--QQEHNGNSYRFIIISKFGSDL 600
+ + + + K+ + L+ L P +G +EH ++++
Sbjct: 53 -------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA----WLVMEYCLGSA 101
Query: 601 QKLLDEHKE-FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
LL+ HK+ + L L Y+H +H D+K N+LL S +V + D
Sbjct: 102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGD 158
Query: 660 FGLAS 664
FG AS
Sbjct: 159 FGSAS 163
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 15 QNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
Q V + V AL L Y+H +H D+K N+LL S +V + DFG AS
Sbjct: 113 QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSAS 163
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D Q + ++D+GLA Y
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 183
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D Q + ++D+GLA Y
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 567 KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSL 626
K G P +K E N + + K G +L L E S K T I +LL+ +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKG-ELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+H VH DLKP N+LL D + + + DFG + +
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQ 160
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK-------- 71
R ++R L+ + +H VH DLKP N+LL D + + + DFG + +
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREV 170
Query: 72 --------------DTDDNHKAHIVEKKSAHNGTLIYTSLVA 99
+DNH + E G ++YT L
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ S A + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA 173
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 32 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 71
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 72 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 122
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 123 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSG 179
Query: 672 NHK 674
+H+
Sbjct: 180 SHQ 182
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQ 185
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + S D+ L L TG LP++
Sbjct: 186 L------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 38/187 (20%)
Query: 495 AKKSWKVGKS-------LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNF 547
AK +W++ + LG G FGEV+ T +G V G +
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTM------ 55
Query: 548 YVRCAKPE-HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLL 604
PE L+ + KKL+ L YA+ ++ +I++ G L L
Sbjct: 56 -----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVMEYMSKGCLLDFLK 104
Query: 605 DEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
E K L + + + + + Y+ YVH DL+ AN+L+G + + DFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 161
Query: 664 SRYKDTD 670
+D +
Sbjct: 162 RLIEDNE 168
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ Y+ YVH DL+ AN+L+G + + DFGLA +D +
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 168
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 10 WTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVD 53
+ + + + ++L+ L +L+YIHH GYVH +K +++L+ VD
Sbjct: 105 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 148
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
I +L +L+YIHH GYVH +K +++L+ VD
Sbjct: 117 ILQGVLKALDYIHHMGYVHRSVKASHILISVD 148
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 10 WTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVD 53
+ + + + ++L+ L +L+YIHH GYVH +K +++L+ VD
Sbjct: 121 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 164
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
I +L +L+YIHH GYVH +K +++L+ VD
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVD 164
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 567 KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSL 626
K G P +K E N + + K G +L L E S K T I +LL+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKG-ELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+H VH DLKP N+LL D + + + DFG + +
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQ 173
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK-------- 71
R ++R L+ + +H VH DLKP N+LL D + + + DFG + +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREV 183
Query: 72 --------------DTDDNHKAHIVEKKSAHNGTLIYTSLVA 99
+DNH + E G ++YT L
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 567 KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSL 626
K G P +K E N + + K G +L L E S K T I +LL+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKG-ELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+H VH DLKP N+LL D + + + DFG + +
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQ 173
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK-------- 71
R ++R L+ + +H VH DLKP N+LL D + + + DFG + +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSV 183
Query: 72 --------------DTDDNHKAHIVEKKSAHNGTLIYTSLVA 99
+DNH + E G ++YT L
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 40 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 79
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSG 187
Query: 672 NHK 674
+H+
Sbjct: 188 SHQ 190
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQ 193
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + S D+ L L TG LP++
Sbjct: 194 L------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
+ W + ++LG G GEV A + V + V +K+ V+ V C PE+
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAV-----AVKI--------VDMKRAVDC--PEN 50
Query: 557 LEAWKKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSL 612
+ KKE K L + FY G + Y F+ G +L ++
Sbjct: 51 I---KKEICINKMLNHENVVKFY---GHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPE 103
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
+ L+ + Y+H G H D+KP N+LL + + I DFGLA+ ++
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR 155
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 32 YIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGT 91
Y+H G H D+KP N+LL + + I DFGLA+ ++ N++ ++ K GT
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFR---YNNRERLLNKMC---GT 169
Query: 92 LIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
L Y + + + + D+ L + G LPW
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ R L++L YIH G +H +LKP N+ +D S+ V I DFGLA
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIF--IDESRN-VKIGDFGLA 163
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L YIH G +H +LKP N+ +D S+ V I DFGLA
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIF--IDESRN-VKIGDFGLA 163
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 12 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 51
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 102
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSG 159
Query: 672 NHK 674
+H+
Sbjct: 160 SHQ 162
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQ--- 162
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 163 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V R L +LE++H +H ++K N+LLG+D S V + DFG ++
Sbjct: 122 VCRECLQALEFLHSNQVIHRNIKSDNILLGMDGS---VKLTDFGFCAQ 166
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 623 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 682
L +LE++H +H ++K N+LLG+D S V + DFG ++ + + ++ +V
Sbjct: 127 LQALEFLHSNQVIHRNIKSDNILLGMDGS---VKLTDFGFCAQIT-PEQSKRSTMVGTPY 182
Query: 683 AHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITISTLIYTSLVAHRG 729
E + RK + KV W ++ P Y+ + L L+A G
Sbjct: 183 WMAPE--VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 233
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++R +L Y+H+ G H D+KP N L + S I +VDFGL+ +
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI-KLVDFGLSKEF 220
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
I + +L Y+H+ G H D+KP N L + S I +VDFGL+ +
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI-KLVDFGLSKEF 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 118 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+++ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 23/167 (13%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
W++ LG FG+VY A + K E VE + C P ++
Sbjct: 14 WEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTI 618
L FY + N + I G+ +L+ + + +
Sbjct: 72 L-----------LDAFY-------YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 113
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 114 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 157
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
V + LD+L Y+H +H DLK N+L +D + + DFG++++
Sbjct: 113 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAK 157
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L+++ + H G VH +LKP N+LL A V + DFGLA
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++ + H G VH +LKP N+LL A V + DFGLA
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 69
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 70 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 123
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 41/173 (23%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 39 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 78
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 79 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 129
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 130 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLAT 179
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQ 192
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + S D+ L L TG LP++
Sbjct: 193 L------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 237
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 76
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 77 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 130
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 68
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 69 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 122
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 166
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 166
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVL--LGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
VLR + + ++ G VH ++KP N++ +G D Q++ + DFG A + DD
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAARELE--DDEQFV 173
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ + + + +++ K D+ + H TGSLP+ +E
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVL--LGVDSSQAIVNIVDFGLASRYKDTD 670
L + ++ + ++ G VH ++KP N++ +G D Q++ + DFG A +D +
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAARELEDDE 170
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+++ L+ + Y+H VH DLKP N+LL + IVDFG++ + H
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--------GHA 187
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQ 135
E + GT Y + ++ + T + + +I I+AY LL T + P+ + Q
Sbjct: 188 CELREIM-GTPEYLAPEILNYDPITTATDMWNIGIIAYMLL---THTSPFVGEDNQ 239
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+L+ + Y+H VH DLKP N+LL + IVDFG++ +
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ F+ + I S+ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 126 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+++ ++++Y+H H D+KP N+L AI+ + DFG A
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 74
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 75 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 128
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 172
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 127 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++++ ++L +++ H E + + +L ++++H G +H DLKP+N+++ D
Sbjct: 105 YLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 650 SSQAIVNIVDFGLA 663
+ + I+DFGLA
Sbjct: 163 CT---LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 69
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 70 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 123
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 21 WVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
W+L LE IH GY H DLKP N+LLG D Q + ++D G
Sbjct: 138 WLLLGICRGLEAIHAKGYAHRDLKPTNILLG-DEGQPV--LMDLG 179
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 598 SDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
+++++L D+ + L + + LE IH GY H DLKP N+LLG D Q + +
Sbjct: 119 NEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG-DEGQPV--L 175
Query: 658 VDFG 661
+D G
Sbjct: 176 MDLG 179
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKXVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLXQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NVL +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVL--IDHEHRKLRLIDWGLAEFY 182
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NVL +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVL--IDHEHRKLRLIDWGLAEFY 182
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 175
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 175
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 76
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 77 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 130
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 21/170 (12%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K + G+ LG GGF + Y T D++ +V K V K KP
Sbjct: 26 KRYMRGRFLGKGGFAKCYEIT-DMDTKEVFAGKVVPK---------------SMLLKPHQ 69
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
E E + K+L P G E + Y + I + S L +L K +
Sbjct: 70 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS-LLELHKRRKAVTEPEA 128
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ ++Y+H+ +H DLK N+ L D V I DFGLA++
Sbjct: 129 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATK 175
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS-------RYKD 72
R+ +R + ++Y+H+ +H DLK N+ L D V I DFGLA+ R KD
Sbjct: 129 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGERKKD 185
Query: 73 T--DDNHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
L I + +++E++H G +H DLKP+N+ +D +V + DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVT 212
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
+++E++H G +H DLKP+N+ +D +V + DFGL +
Sbjct: 175 EAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVT 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 211
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 113
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 114 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 167
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 211
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 590 FIIISKF-GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
+++ K G + + + + F+ + + +L+++H+ G H DLKP N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 649 DSSQAIVNIVDFGLASRYKDTDD 671
+ + V I DFGL S K D
Sbjct: 147 PNQVSPVKICDFGLGSGIKLNGD 169
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
V++ +L+++H+ G H DLKP N+L + + V I DFGL S K D
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 41/173 (23%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 40 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 79
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 131 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLAT 180
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQ 193
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
+ +G++++ + ++ + S D+ L L TG LP++
Sbjct: 194 L------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 14 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 58
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 59 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 155
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 118 VSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 155
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 21/170 (12%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K + G+ LG GGF + Y T D++ +V K V K KP
Sbjct: 42 KRYMRGRFLGKGGFAKCYEIT-DMDTKEVFAGKVVPKSML---------------LKPHQ 85
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
E E + K+L P G E + Y + I + S L +L K +
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS-LLELHKRRKAVTEPEA 144
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ ++Y+H+ +H DLK N+ L D V I DFGLA++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATK 191
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ +R + ++Y+H+ +H DLK N+ L D V I DFGLA++ + +
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGERKKX 201
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 21/170 (12%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K + G+ LG GGF + Y T D++ +V K V K KP
Sbjct: 42 KRYMRGRFLGKGGFAKCYEIT-DMDTKEVFAGKVVPKSML---------------LKPHQ 85
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
E E + K+L P G E + Y + I + S L +L K +
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS-LLELHKRRKAVTEPEA 144
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ ++Y+H+ +H DLK N+ L D V I DFGLA++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATK 191
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS-------RYKD 72
R+ +R + ++Y+H+ +H DLK N+ L D V I DFGLA+ R KD
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGERKKD 201
Query: 73 T--DDNHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 21/170 (12%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K + G+ LG GGF + Y T D++ +V K V K KP
Sbjct: 42 KRYMRGRFLGKGGFAKCYEIT-DMDTKEVFAGKVVPKSML---------------LKPHQ 85
Query: 557 LEAWKKEKKL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
E E + K+L P G E + Y + I + S L +L K +
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS-LLELHKRRKAVTEPEA 144
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+ ++Y+H+ +H DLK N+ L D V I DFGLA++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATK 191
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ +R + ++Y+H+ +H DLK N+ L D V I DFGLA++ + +
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGERKKT 201
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 211
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 113
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 114 LMKCVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 167
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 11 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 55
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVL--LGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
VLR + + ++ G VH ++KP N++ +G D Q++ + DFG A + DD
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAARELE--DDEQFV 173
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYE 133
+ + + + +++ K D+ + H TGSLP+ +E
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVL--LGVDSSQAIVNIVDFGLASRYKDTD 670
L + ++ + ++ G VH ++KP N++ +G D Q++ + DFG A +D +
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAARELEDDE 170
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 11 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 55
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 11 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 55
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 11 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 55
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 14 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 53
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 54 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 104
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 105 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSG 161
Query: 672 NHK 674
+H+
Sbjct: 162 SHQ 164
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQ--- 164
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 165 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 212
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 174
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 24/188 (12%)
Query: 489 AIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQN-- 546
A + + +KVG LG G F VY A +V K Y G + QN
Sbjct: 3 ATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 547 -FYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD 605
+ + P LE + + + + + HNG R+ L +
Sbjct: 63 KIHCQLKHPSILELYNYFED------SNYVYLVLEMCHNGEMNRY------------LKN 104
Query: 606 EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
K FS ++ + Y+H G +H DL +N+LL + + I DFGLA++
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQ 161
Query: 666 YKDTDDNH 673
K + H
Sbjct: 162 LKMPHEKH 169
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH-- 77
R + + + Y+H G +H DL +N+LL + + I DFGLA++ K + H
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 78 ---------------KAHIVEKKSAHNGTLIYTSLVA 99
AH +E G + YT L+
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 355 PEEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 413
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQ 601
K E L + ++ L P M G E S+ ++ L
Sbjct: 414 -----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLN 457
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFG
Sbjct: 458 KYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFG 514
Query: 662 LASRYKDTDDNHKAH 676
L+ + ++ +KA
Sbjct: 515 LSKALRADENYYKAQ 529
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 481 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 529
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 12 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 51
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 102
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSG 159
Query: 672 NHK 674
+H+
Sbjct: 160 SHQ 162
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQ--- 162
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 163 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++++ ++L +++ H E + + +L ++++H G +H DLKP+N+++ D
Sbjct: 103 YLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 160
Query: 650 SSQAIVNIVDFGLA 663
+ + I+DFGLA
Sbjct: 161 CT---LKILDFGLA 171
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 126 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 171
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 178
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 178
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLA 167
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++R L L+++H VH DLKP N+L+ +S V + DFGLA Y
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIY 162
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 591 IIISKFGSDLQKLLDEHKEFSL--KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+ LD+ L + + L L+++H VH DLKP N+L+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-- 145
Query: 649 DSSQAIVNIVDFGLASRY 666
+S V + DFGLA Y
Sbjct: 146 -TSGGTVKLADFGLARIY 162
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++R L L+++H VH DLKP N+L+ +S V + DFGLA Y
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIY 162
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 591 IIISKFGSDLQKLLDEHKEFSL--KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+ LD+ L + + L L+++H VH DLKP N+L+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-- 145
Query: 649 DSSQAIVNIVDFGLASRY 666
+S V + DFGLA Y
Sbjct: 146 -TSGGTVKLADFGLARIY 162
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++R L L+++H VH DLKP N+L+ +S V + DFGLA Y
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIY 162
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 591 IIISKFGSDLQKLLDEHKEFSL--KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+ LD+ L + + L L+++H VH DLKP N+L+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-- 145
Query: 649 DSSQAIVNIVDFGLASRY 666
+S V + DFGLA Y
Sbjct: 146 -TSGGTVKLADFGLARIY 162
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 11 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 55
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+LEY+H V+ D+K N++L D + I DFGL
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 152
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
K LG G FG+V + K G Y MK+ V AK E +
Sbjct: 16 KLLGKGTFGKVILVRE-----KATGRYYAMKILRKE----------VIIAKDEVAHTVTE 60
Query: 563 EKKLKTLGLPTFYAMK-GQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSS 621
+ L+ P A+K Q H+ F++ G +L L + F+ + G+
Sbjct: 61 SRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ +LEY+H V+ D+K N++L D + I DFGL
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 157
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+LEY+H V+ D+K N++L D + I DFGL
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGH---IKITDFGLC 157
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ ++L L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEH 556
K ++ K +GSG G V +A D V D V ++ + P F Q R +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNV-------AIKKLSRP-FQNQTHAKRAYRELV 75
Query: 557 LEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTL 616
L K + +L L F K +E ++++ ++L +++ E +
Sbjct: 76 LMKXVNHKNIISL-LNVFTPQKTLEEFQD---VYLVMELMDANLCQVI--QMELDHERMS 129
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +L ++++H G +H DLKP+N+++ D + + I+DFGLA
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT---LKILDFGLA 173
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
++R L L+++H VH DLKP N+L+ +S V + DFGLA Y
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIY 170
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 591 IIISKFGSDLQKLLDEHKEFSL--KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+ LD+ L + + L L+++H VH DLKP N+L+
Sbjct: 96 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV-- 153
Query: 649 DSSQAIVNIVDFGLASRY 666
+S V + DFGLA Y
Sbjct: 154 -TSGGTVKLADFGLARIY 170
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 17 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 56
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 107
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSG 164
Query: 672 NHK 674
+H+
Sbjct: 165 SHQ 167
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQ--- 167
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 168 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
L+ ++Y+H G +H D+KP+N+LL +++ V + DFGL+ +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF 159
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 11 TNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
N + V ++V+ + ++Y+H G +H D+KP+N+LL +++ V + DFGL+ +
Sbjct: 103 ANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF 159
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 41/183 (22%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 17 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 56
Query: 561 KKE----KKLKTLGLPTF--YAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFS 611
K E +K + + + F Y+ K Q I++++ GS L L +F
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQ---------LAIVTQWCEGSSLYHHLHIIETKFE 107
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 671
+ + I ++Y+H +H DLK N+ L D + V I DFGLA+
Sbjct: 108 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSG 164
Query: 672 NHK 674
+H+
Sbjct: 165 SHQ 167
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQ--- 167
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 168 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 356 PEEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 414
Query: 542 FVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQ 601
K E L + ++ L P M G E S+ ++ L
Sbjct: 415 -----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLN 458
Query: 602 KLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
K L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFG
Sbjct: 459 KYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFG 515
Query: 662 LASRYKDTDDNHKAH 676
L+ + ++ +KA
Sbjct: 516 LSKALRADENYYKAQ 530
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 482 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 530
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 187
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 187
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 180
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 180
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
+L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN---IKIADFGFSNEFT-------- 164
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K A G Y + +G K D+ L L L +GSLP+
Sbjct: 165 -FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
++ +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXN---IKIADFGFSNEF 163
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMK--VEYSTGPLFVEQNF-YVRCAKPE 555
+ + ++LG G FG+V AT KV K++ + ++ S + VE+ Y++ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKV-ALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
H+ K + PT M +I G +L + E K +
Sbjct: 70 HII-----KLYDVITTPTDIVM--------------VIEYAGGELFDYIVEKKRMTEDEG 110
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ ++EY H VH DLKP N+LL + + V I DFGL++ D +
Sbjct: 111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGN 162
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
++EY H VH DLKP N+LL + + V I DFGL++ D +
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGN 162
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 117 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNEFT-------- 165
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
+ K A G Y + +G K D+ L L L +GSLP+
Sbjct: 166 -VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K + ++ +++Y H VH DLK N+LL D + +
Sbjct: 98 GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IK 154
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 155 IADFGFSNEF 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 157 KIIDFGLAHK 166
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 157 KIIDFGLAHK 166
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 485 IKPGAIFVDSAK-KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL-- 541
+ P + D A ++++ K+LG G FG+V A KV K + K + +
Sbjct: 1 MNPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKV-ALKIINKKVLAKSDMQG 59
Query: 542 FVEQNF-YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDL 600
+E+ Y+R + H+ + + +K + E ++I G++L
Sbjct: 60 RIEREISYLRLLRHPHI-------------IKLYDVIKSKDE------IIMVIEYAGNEL 100
Query: 601 QKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 660
+ + + S + ++ ++EY H VH DLKP N+LL V I DF
Sbjct: 101 FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADF 157
Query: 661 GLASRYKDTD 670
GL++ D +
Sbjct: 158 GLSNIMTDGN 167
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 116 RRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 167
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K A G Y + +G K D+ L L L +GSLP+
Sbjct: 168 ----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IK 153
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 154 IADFGFSNEF 163
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
VG+ +GSG FG VY K G +K+ T P P+ L+A+
Sbjct: 12 VGQRIGSGSFGTVYKG-------KWHG-DVAVKMLNVTAP------------TPQQLQAF 51
Query: 561 KKE----KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDL-QKLLDEHKEFSLK 613
K E +K + + + F + + I++++ GS L L +F +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYS-------TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 673
+ I ++Y+H +H DLK N+ L D + V I DFGLA+ +H
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSH 161
Query: 674 K 674
+
Sbjct: 162 Q 162
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHI 81
+ R ++Y+H +H DLK N+ L D + V I DFGLA+ +H+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQ--- 162
Query: 82 VEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
E+ S G++++ + ++ + S D+ L L TG LP++
Sbjct: 163 FEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 599 DLQKLLDEHKEFSLKNTLTIG-SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
DL+K+LDE+K + + I LL + + H +H DLKP N+L+ D + + +
Sbjct: 104 DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKL 160
Query: 658 VDFGLASRY 666
DFGLA +
Sbjct: 161 ADFGLARAF 169
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 12 NATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
Q+ ++ L L + + H +H DLKP N+L+ D + + + DFGLA +
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFG 170
Query: 72 DTDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGS--LPW 129
++ +V TL Y + G+K S DI + + TG P
Sbjct: 171 IPVRSYTHEVV--------TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 130 TAYEQQPEKVLAM 142
+ Q K+ ++
Sbjct: 223 VTDDDQLPKIFSI 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 487 PGAIFVDSAK-KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL--FV 543
P + D A ++++ K+LG G FG+V A KV K + K + + +
Sbjct: 2 PKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKV-ALKIINKKVLAKSDMQGRI 60
Query: 544 EQNF-YVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
E+ Y+R + H+ + + +K + E ++I G++L
Sbjct: 61 EREISYLRLLRHPHI-------------IKLYDVIKSKDE------IIMVIEYAGNELFD 101
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
+ + + S + ++ ++EY H VH DLKP N+LL V I DFGL
Sbjct: 102 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGL 158
Query: 663 ASRYKDTD 670
++ D +
Sbjct: 159 SNIMTDGN 166
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 115 RRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 599 DLQKLLDEHKEFSLKNTLTIG-SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
DL+K+LDE+K + + I LL + + H +H DLKP N+L+ D + + +
Sbjct: 104 DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKL 160
Query: 658 VDFGLASRY 666
DFGLA +
Sbjct: 161 ADFGLARAF 169
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 12 NATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
Q+ ++ L L + + H +H DLKP N+L+ D + + + DFGLA +
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFG 170
Query: 72 DTDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGS--LPW 129
++ +V TL Y + G+K S DI + + TG P
Sbjct: 171 IPVRSYTHEVV--------TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 130 TAYEQQPEKVLAM 142
+ Q K+ ++
Sbjct: 223 VTDDDQLPKIFSI 235
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 502 GKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC-AKPEHLEAW 560
G +G GGFG VY VN+ V K V+ +T L + + ++ AK +H
Sbjct: 36 GNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH---- 89
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIII-SKFGSDLQKL--LDEHKEFSLKNTLT 617
E ++ LG + +G+ + + GS L +L LD S
Sbjct: 90 --ENLVELLGFSS----------DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
I + + ++H ++H D+K AN+LL I DFGLA
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 180
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA-SRYKD 72
L W +R A + + ++H ++H D+K AN+LL I DFGLA + K
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF 186
Query: 73 TDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAY 132
IV GT Y + A RG T DI LL + TG LP
Sbjct: 187 AQTVMXXRIV-------GTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITG-LPAVDE 236
Query: 133 EQQPEKVL 140
++P+ +L
Sbjct: 237 HREPQLLL 244
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 502 GKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC-AKPEHLEAW 560
G +G GGFG VY VN+ V K V+ +T L + + ++ AK +H
Sbjct: 36 GNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH---- 89
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIII-SKFGSDLQKL--LDEHKEFSLKNTLT 617
E ++ LG + +G+ + + GS L +L LD S
Sbjct: 90 --ENLVELLGFSS----------DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
I + + ++H ++H D+K AN+LL I DFGLA
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 180
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA-SRYKD 72
L W +R A + + ++H ++H D+K AN+LL I DFGLA + K
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF 186
Query: 73 TDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAY 132
+ IV GT Y + A RG T DI LL + TG LP
Sbjct: 187 AQTVMXSRIV-------GTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITG-LPAVDE 236
Query: 133 EQQPEKVL 140
++P+ +L
Sbjct: 237 HREPQLLL 244
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL--FVEQNF-YVRCAKP 554
++++ K+LG G FG+V A KV K + K + + +E+ Y+R +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKV-ALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKN 614
H+ + + +K + E ++I G++L + + + S +
Sbjct: 64 PHI-------------IKLYDVIKSKDE------IIMVIEYAGNELFDYIVQRDKMSEQE 104
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 105 ARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 157
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 106 RRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 157
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 502 GKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC-AKPEHLEAW 560
G +G GGFG VY VN+ V K V+ +T L + + ++ AK +H
Sbjct: 30 GNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH---- 83
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIII-SKFGSDLQKL--LDEHKEFSLKNTLT 617
E ++ LG + +G+ + + GS L +L LD S
Sbjct: 84 --ENLVELLGFSS----------DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
I + + ++H ++H D+K AN+LL I DFGLA
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 174
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA-SRYKD 72
L W +R A + + ++H ++H D+K AN+LL I DFGLA + K
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF 180
Query: 73 TDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAY 132
IV GT Y + A RG T DI LL + TG LP
Sbjct: 181 AQXVMXXRIV-------GTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITG-LPAVDE 230
Query: 133 EQQPEKVL 140
++P+ +L
Sbjct: 231 HREPQLLL 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + + +L+ + Y+H H DLKP N+ LL + + +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 656 NIVDFGLASR 665
I+DFGLA +
Sbjct: 158 KIIDFGLAHK 167
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGLASR 69
L+ L+ + Y+H H DLKP N+ LL + + + I+DFGLA +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
W R+ + +L+ IH G++H D+KP N+LL + + DFG + +
Sbjct: 169 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKM------N 219
Query: 78 KAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
K +V +A GT Y S L + G R CD + L + G P+ A
Sbjct: 220 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 63/266 (23%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEY---STGPLFVEQNFYVRCAK 553
+ ++V K +G G FGEV + KV K + K E S F E+ + A
Sbjct: 69 EDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 554 PEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSL 612
+ + FYA + + Y ++++ G DL L+ + +
Sbjct: 128 SPWV-------------VQLFYAFQDDR------YLYMVMEYMPGGDLVNLMSNY-DVPE 167
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
K + ++ +L+ IH G++H D+KP N+LL + + DFG
Sbjct: 168 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFG----------- 213
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKT 732
+C+ + K M + C P YI+ L + G
Sbjct: 214 ---------------TCMKMNKEGMVR----CDTAVGTPDYISPEV-----LKSQGGDGY 249
Query: 733 TSRICDIEILAYNLLHLNTGSLPWTA 758
R CD + L + G P+ A
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 14 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 64
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 65 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 108
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 109 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 165
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 122 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 165
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 600 LQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
L K L +++ KN + + + ++Y+ +VH DL NVLL +Q I D
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISD 154
Query: 660 FGLASRYKDTDDNHKAH 676
FGL+ + ++ +KA
Sbjct: 155 FGLSKALRADENXYKAQ 171
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 123 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENXYKAQ 171
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
W R+ + +L+ IH G++H D+KP N+LL + + DFG + +
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKM------N 224
Query: 78 KAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
K +V +A GT Y S L + G R CD + L + G P+ A
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 63/266 (23%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEY---STGPLFVEQNFYVRCAK 553
+ ++V K +G G FGEV + KV K + K E S F E+ + A
Sbjct: 74 EDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 554 PEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSL 612
+ + FYA + + Y ++++ G DL L+ + +
Sbjct: 133 SPWV-------------VQLFYAFQDDR------YLYMVMEYMPGGDLVNLMSNY-DVPE 172
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
K + ++ +L+ IH G++H D+KP N+LL + + DFG
Sbjct: 173 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFG----------- 218
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKT 732
+C+ + K M + C P YI+ L + G
Sbjct: 219 ---------------TCMKMNKEGMVR----CDTAVGTPDYISPEV-----LKSQGGDGY 254
Query: 733 TSRICDIEILAYNLLHLNTGSLPWTA 758
R CD + L + G P+ A
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 17 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 67
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 68 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 111
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 112 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 168
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 125 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 168
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
W R+ + +L+ IH G++H D+KP N+LL + + DFG + +
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKM------N 224
Query: 78 KAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
K +V +A GT Y S L + G R CD + L + G P+ A
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 63/266 (23%)
Query: 497 KSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEY---STGPLFVEQNFYVRCAK 553
+ ++V K +G G FGEV + KV K + K E S F E+ + A
Sbjct: 74 EDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 554 PEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSL 612
+ + FYA + + Y ++++ G DL L+ + +
Sbjct: 133 SPWV-------------VQLFYAFQDDR------YLYMVMEYMPGGDLVNLMSNY-DVPE 172
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
K + ++ +L+ IH G++H D+KP N+LL + + DFG
Sbjct: 173 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFG----------- 218
Query: 673 HKAHIVEKKSAHNGESCLSLRKLFMQKVAFWCSYVDAAPKYITISTLIYTSLVAHRGAKT 732
+C+ + K M + C P YI+ L + G
Sbjct: 219 ---------------TCMKMNKEGMVR----CDTAVGTPDYISPEV-----LKSQGGDGY 254
Query: 733 TSRICDIEILAYNLLHLNTGSLPWTA 758
R CD + L + G P+ A
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 18 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 68
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 69 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 112
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 113 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 169
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 126 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 169
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 20/194 (10%)
Query: 483 DPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLF 542
+ I+P +++D + + K LGSG FG V + ++K E + L
Sbjct: 4 EEIRPKEVYLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL- 61
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
K E L + ++ L P M G E S+ ++ L K
Sbjct: 62 ----------KDELL---AEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNK 106
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 662
L +++ KN + + + ++Y+ +VH DL NVLL +Q I DFGL
Sbjct: 107 YLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGL 163
Query: 663 ASRYKDTDDNHKAH 676
+ + ++ +KA
Sbjct: 164 SKALRADENYYKAQ 177
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 129 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 177
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 13 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 63
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 64 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 107
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 108 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 164
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 121 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 164
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 498 SWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL--FVEQNF-YVRCAKP 554
++++ K+LG G FG+V A KV K + K + + +E+ Y+R +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKV-ALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 555 EHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKN 614
H+ + + +K + E ++I G++L + + + S +
Sbjct: 68 PHI-------------IKLYDVIKSKDE------IIMVIEYAGNELFDYIVQRDKMSEQE 108
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 109 ARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 161
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + ++EY H VH DLKP N+LL V I DFGL++ D +
Sbjct: 110 RRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN 161
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 18 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 68
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 69 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 112
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 113 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 169
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 126 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 169
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 21 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 71
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 72 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 115
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 116 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 172
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 129 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 172
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 7 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 57
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 58 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 101
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 102 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 158
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 115 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 158
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+++ +++G G FG+V ND K Y MK Y VE+N E
Sbjct: 17 FEILRAIGKGSFGKVCIVQK--NDTK---KMYAMK--YMNKQKCVERN--------EVRN 61
Query: 559 AWKKEKKLKTLGLP----TFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLK 613
+K+ + ++ L P +Y+ + +++ F+++ G DL+ L ++ F +
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEED------MFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
L+ +L+Y+ + +H D+KP N+LL V+I DF +A+
Sbjct: 116 TVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAA 163
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 68
+L+Y+ + +H D+KP N+LL V+I DF +A+
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAA 163
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 12 ERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 56
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L++ L +HKE
Sbjct: 57 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGS-LREYLQKHKERID 115
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 164
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVL-LGVDSSQAIVNIVDFGLASRY 666
+LD + Y+H +H DLKPAN+L +G + V I D G A +
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVL-LGVDSSQAIVNIVDFGLASRY 70
+L LD + Y+H +H DLKPAN+L +G + V I D G A +
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 12 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 62
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 63 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 106
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 120 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 12 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 62
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 63 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 106
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 120 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 20 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 70
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 71 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 114
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 115 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 171
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 128 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 171
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 114 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNEFT-------- 162
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
+ K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 163 -VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K + ++ +++Y H VH DLK N+LL D + +
Sbjct: 95 GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IK 151
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 152 IADFGFSNEF 161
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 12 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 62
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 63 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 106
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 120 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 163
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 22 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 72
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 73 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 116
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 117 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 173
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H DL+ AN+L+ S I DFGLA +D +
Sbjct: 130 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE 173
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 600 LQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
L K L +++ KN + + + ++Y+ +VH DL NVLL +Q I D
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISD 154
Query: 660 FGLASRYKDTDDNHKAH 676
FGL+ + ++ +KA
Sbjct: 155 FGLSKALRADENYYKAQ 171
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 123 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 171
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 117 RAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN---IKIADFGFSNEFT-------- 165
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
+ K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 166 -VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 98 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN---IK 154
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 155 IADFGFSNEF 164
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 154 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 197
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 197
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 32/113 (28%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
+L ++H G ++ DLKP N++L + Q V + DFGL K+S H
Sbjct: 133 ALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLC----------------KESIH 173
Query: 89 NGTLIYT----------SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
+GT+ +T ++ G + L Y++L TG+ P+T
Sbjct: 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML---TGAPPFTG 223
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P + +++ + LG GG+G+V+ N G + MKV
Sbjct: 11 PEKIRP---------ECFELLRVLGKGGYGKVFQVRKVTGANT--GKIFAMKV------- 52
Query: 542 FVEQNFYVRCAK-PEHLEAWKK--EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGS 598
+++ VR AK H +A + E+ + YA + G I+ G
Sbjct: 53 -LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ-----TGGKLYLILEYLSGG 106
Query: 599 DLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
+L L+ F + + +L ++H G ++ DLKP N++L + Q V +
Sbjct: 107 ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLT 163
Query: 659 DFGLA 663
DFGL
Sbjct: 164 DFGLC 168
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 25/166 (15%)
Query: 502 GKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC-AKPEHLEAW 560
G G GGFG VY VN+ V K V+ +T L + + ++ AK +H
Sbjct: 27 GNKXGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQH---- 80
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIII-SKFGSDLQKL--LDEHKEFSLKNTLT 617
E ++ LG + +G+ + + GS L +L LD S
Sbjct: 81 --ENLVELLGFSS----------DGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK 128
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
I + + ++H ++H D+K AN+LL I DFGLA
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 171
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA-SRYKD 72
L W R A + + ++H ++H D+K AN+LL I DFGLA + K
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKF 177
Query: 73 TDDNHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAY 132
+ IV GT Y + A RG T DI LL + TG LP
Sbjct: 178 AQXVXXSRIV-------GTTAYXAPEALRGEITPKS--DIYSFGVVLLEIITG-LPAVDE 227
Query: 133 EQQPEKVL 140
++P+ +L
Sbjct: 228 HREPQLLL 235
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H DL N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G + +V + DFGL+ T D + AH
Sbjct: 144 VGENH---LVKVADFGLSRLM--TGDTYTAH 169
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 164
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 165 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 218 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 200 L 200
+
Sbjct: 275 I 275
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 590 FIIISKF-GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
+++ K G + + + K F+ + + + +L+++H G H DLKP N+L
Sbjct: 87 YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCES 146
Query: 649 DSSQAIVNIVDFGLASRYK 667
+ V I DF L S K
Sbjct: 147 PEKVSPVKICDFDLGSGMK 165
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 71
V+R +L+++H G H DLKP N+L + V I DF L S K
Sbjct: 116 VVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 600 LQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
L K L +++ KN + + + ++Y+ +VH DL NVLL +Q I D
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISD 150
Query: 660 FGLASRYKDTDDNHKAH 676
FGL+ + ++ +KA
Sbjct: 151 FGLSKALRADENYYKAQ 167
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 119 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 167
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 600 LQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVD 659
L K L +++ KN + + + ++Y+ +VH DL NVLL +Q I D
Sbjct: 92 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISD 148
Query: 660 FGLASRYKDTDDNHKAH 676
FGL+ + ++ +KA
Sbjct: 149 FGLSKALRADENYYKAQ 165
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++Y+ +VH DL NVLL +Q I DFGL+ + ++ +KA
Sbjct: 117 GMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQ 165
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 178
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 178
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 503 KSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE----HL 557
+ LG G FG+V D DN TG + V+ KPE H+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDN--------------TG-----EQVAVKSLKPESGGNHI 67
Query: 558 EAWKKEKK-LKTLGLPTFYAMKG-QQEHNGNSYRFIIISKFGSDLQKLLDEHK-EFSLKN 614
KKE + L+ L KG E GN + I+ L++ L ++K + +LK
Sbjct: 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + ++Y+ YVH DL NVL+ S+ V I DFGL
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLT 173
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 25/173 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G +GEVY KY + V T ++ E E K+
Sbjct: 21 LGGGQYGEVYEGVWK---------KYSLTVAVKT----------LKEDTMEVEEFLKEAA 61
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD-EHKEFSLKNTLTIGSSLL 623
+K + P + G Y I +G+ L L + +E S L + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 624 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
++EY+ ++H DL N L+G +V + DFGL+ T D + AH
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM--TGDTYTAH 169
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 164
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 165 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 218 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 200 L 200
+
Sbjct: 275 I 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H DL N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G + +V + DFGL+ T D + AH
Sbjct: 149 VGENH---LVKVADFGLSRLM--TGDTYTAH 174
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 169
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 170 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 223 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 279
Query: 200 L 200
+
Sbjct: 280 I 280
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H DL N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G +V + DFGL+ T D + AH
Sbjct: 144 VG---ENHLVKVADFGLSRLM--TGDTYTAH 169
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 164
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 165 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 218 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 200 L 200
+
Sbjct: 275 I 275
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
W ++ + +L+ IH G +H D+KP N+LL + + DFG + +T H
Sbjct: 175 WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVH 231
Query: 78 KAHIVEKKSAHNGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
V GT Y S L + G R CD + L + G P+ A
Sbjct: 232 CDTAV-------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 625 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+L+ IH G +H D+KP N+LL + + DFG + +T
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDET 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 168 ----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IK 153
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 154 IADFGFSNEF 163
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 25/173 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G +GEVY KY + V T E V E K+
Sbjct: 21 LGGGQYGEVYEGVWK---------KYSLTVAVKT---LKEDTMEVE-------EFLKEAA 61
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD-EHKEFSLKNTLTIGSSLL 623
+K + P + G Y I +G+ L L + +E S L + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 624 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
++EY+ ++H DL N L+G +V + DFGL+ T D + AH
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM--TGDTYTAH 169
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 164
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 165 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 218 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274
Query: 200 L 200
+
Sbjct: 275 I 275
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+R+ + L +L+Y H G +H D+KP NV+ +D + ++D+GLA Y
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 503 KSLGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE----HL 557
+ LG G FG+V D DN TG + V+ KPE H+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDN--------------TG-----EQVAVKSLKPESGGNHI 55
Query: 558 EAWKKEKK-LKTLGLPTFYAMKG-QQEHNGNSYRFIIISKFGSDLQKLLDEHK-EFSLKN 614
KKE + L+ L KG E GN + I+ L++ L ++K + +LK
Sbjct: 56 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 115
Query: 615 TLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + ++Y+ YVH DL NVL+ S+ V I DFGL
Sbjct: 116 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLT 161
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 168 ----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IK 153
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 154 IADFGFSNEF 163
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 584 NGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPAN 643
NGN R + +GSDL + S + L I L Y+H +H D+K N
Sbjct: 119 NGNLKRHL----YGSDLPTM-----SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 644 VLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVE 679
+LL + I DFG++ + + D H +V+
Sbjct: 170 ILL---DENFVPKITDFGISKKGTELDQTHLXXVVK 202
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 73
+ W RL A L Y+H +H D+K N+LL + I DFG++ + +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTEL 192
Query: 74 DDNHKAHIVEKKSAHNGTLIY 94
D H +V+ GTL Y
Sbjct: 193 DQTHLXXVVK------GTLGY 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 168 ----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IK 153
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 154 IADFGFSNEF 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 13 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 57
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 58 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 116
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 117 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 165
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 583 HNGNSYRFIIISKF-GSDLQKLLDEH--KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADL 639
H+G II+ G +L + E + F+ + I + +++++H H D+
Sbjct: 76 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 135
Query: 640 KPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
KP N+L A++ + DFG A K+T N
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFA---KETTQN 165
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
++R +++++H H D+KP N+L A++ + DFG A K+T N
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA---KETTQN 165
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 583 HNGNSYRFIIISKF-GSDLQKLLDEH--KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADL 639
H+G II+ G +L + E + F+ + I + +++++H H D+
Sbjct: 95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154
Query: 640 KPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 672
KP N+L A++ + DFG A K+T N
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFA---KETTQN 184
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDN 76
++R +++++H H D+KP N+L A++ + DFG A K+T N
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA---KETTQN 184
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 89 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G +V + DFGL+ T D + AH
Sbjct: 148 LVG---ENHLVKVADFGLSRLM--TGDTYTAH 174
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 37/178 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 169
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 170 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQK 197
+ + ELL+ K + E P+ E+ + P + ++ Q F Q+
Sbjct: 223 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 95 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 153
Query: 648 VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 680
+ Q +V + DFGL SRY DD + + + K
Sbjct: 154 --NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 182
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+++EY+ ++H DL N L+ + Q +V + DFGL SRY DD + + + K
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 182
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
++ L + + + + + +I Y+H DL+ AN+L+ S I DFGLA +D
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDA 162
Query: 670 DDNHK 674
+ +
Sbjct: 163 EXTAR 167
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+ + +I Y+H DL+ AN+L+ S I DFGLA +D + +
Sbjct: 120 EGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDAEXTAR 167
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 79 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 137
Query: 648 VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 680
+ Q +V + DFGL SRY DD + + + K
Sbjct: 138 --NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 166
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+++EY+ ++H DL N L+ + Q +V + DFGL SRY DD + + + K
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 166
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 52
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 53 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 111
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 112 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 160
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 167
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 168 ----KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G ++ L H K ++ +++Y H VH DLK N+LL D + +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IK 153
Query: 657 IVDFGLASRY 666
I DFG ++ +
Sbjct: 154 IADFGFSNEF 163
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 80 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 138
Query: 648 VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 680
+ Q +V + DFGL SRY DD + + + K
Sbjct: 139 --NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 167
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+++EY+ ++H DL N L+ + Q +V + DFGL SRY DD + + + K
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 167
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 86 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 144
Query: 648 VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 680
+ Q +V + DFGL SRY DD + + + K
Sbjct: 145 --NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 173
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+++EY+ ++H DL N L+ + Q +V + DFGL SRY DD + + + K
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 173
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 84 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 143 LVGENH---LVKVADFGLSRLM--TGDTYTAH 169
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 164
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 165 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKN 198
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 218 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 88 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 146
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 147 LVGENH---LVKVADFGLSRLM--TGDTYTAH 173
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 168
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 169 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 221
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKN 198
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 222 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 53
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 112
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 161
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 84 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G +V + DFGL+ T D + AH
Sbjct: 143 LVG---ENHLVKVADFGLSRLM--TGDTYTAH 169
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
++EY+ ++H DL N L+G +V + DFGL+ T D + AH
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM--TGDTYTAH 169
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 75 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 133
Query: 648 VDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 680
+ Q +V + DFGL SRY DD + + + K
Sbjct: 134 --NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 162
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEK 84
+++EY+ ++H DL N L+ + Q +V + DFGL SRY DD + + + K
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYV-LDDEYTSSVGSK 162
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 482 PDPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL 541
P+ I+P + +++ + LG GG+G+V+ N G + MKV
Sbjct: 11 PEKIRP---------ECFELLRVLGKGGYGKVFQVRKVTGANT--GKIFAMKV------- 52
Query: 542 FVEQNFYVRCAK-PEHLEAWKK--EKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGS 598
+++ VR AK H +A + E+ + YA + G I+ G
Sbjct: 53 -LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ-----TGGKLYLILEYLSGG 106
Query: 599 DLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
+L L+ F + + +L ++H G ++ DLKP N++L + Q V +
Sbjct: 107 ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLT 163
Query: 659 DFGLA 663
DFGL
Sbjct: 164 DFGLC 168
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 32/113 (28%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
+L ++H G ++ DLKP N++L + Q V + DFGL K+S H
Sbjct: 133 ALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLC----------------KESIH 173
Query: 89 NGTLIYT----------SLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTA 131
+GT+ + ++ G + L Y++L TG+ P+T
Sbjct: 174 DGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML---TGAPPFTG 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 89 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 148 LVGENH---LVKVADFGLSRLM--TGDTYTAH 174
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 169
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 170 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 223 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 279
Query: 200 L 200
+
Sbjct: 280 I 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 86 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 144
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G +V + DFGL+ T D + AH
Sbjct: 145 LVG---ENHLVKVADFGLSRLM--TGDTYTAH 171
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 166
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 167 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 220 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 200 L 200
+
Sbjct: 277 I 277
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 34/187 (18%)
Query: 485 IKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTG----- 539
+ PG D ++V + GG G +Y A D V+G V+K +G
Sbjct: 72 LNPG----DIVAGQYEVKGCIAHGGLGWIYLALD----RNVNGRPVVLKGLVHSGDAEAQ 123
Query: 540 -PLFVEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGS 598
E+ F P ++ + + +G+ +I++ G
Sbjct: 124 AMAMAERQFLAEVVHPSIVQ---------------IFNFVEHTDRHGDPVGYIVMEYVGG 168
Query: 599 DLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
K + ++ + + +L +L Y+H G V+ DLKP N++L ++ + ++
Sbjct: 169 QSLKR-SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEEQLKLI 223
Query: 659 DFGLASR 665
D G SR
Sbjct: 224 DLGAVSR 230
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
L +L Y+H G V+ DLKP N++L ++ + ++D G SR
Sbjct: 192 LPALSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSR 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G FG+V A + ++D MK EY++ K +H + + +
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYAS--------------KDDHRDFAGELE 67
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL-----QKLLDEHKEFSLKNT--- 615
L LG P + G EH G Y I + G+ L ++L+ F++ N+
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 616 -------LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + + ++Y+ ++H DL N+L+G + I DFGL+
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLS 179
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 25 LALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
LA+DS IH YVH D+KP NVLL V+ + + DFG + D
Sbjct: 202 LAIDS---IHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMND 243
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 22/175 (12%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ +++ K +G G FGEV + N ++ K + K E K
Sbjct: 89 REDFEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEM---------------LKRA 132
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+++E+ + G + + N ++ G DL LL + ++ ++
Sbjct: 133 ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 192
Query: 616 --LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
IG +L +++ IH YVH D+KP NVLL V+ + + DFG + D
Sbjct: 193 ARFYIGEMVL-AIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMND 243
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 97 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 155
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 156 LVGENH---LVKVADFGLSRLM--TGDTYTAH 182
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 177
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 178 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 230
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 231 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 287
Query: 200 L 200
+
Sbjct: 288 I 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 51
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 52 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 110
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 111 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 159
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G FG+V A + ++D MK EY++ K +H + + +
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYAS--------------KDDHRDFAGELE 77
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL-----QKLLDEHKEFSLKNT--- 615
L LG P + G EH G Y I + G+ L ++L+ F++ N+
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 616 -------LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + + ++Y+ ++H DL N+L+G + I DFGL+
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLS 189
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 25 LALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
LA+DS IH YVH D+KP NVLL V+ + + DFG + D
Sbjct: 186 LAIDS---IHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMND 227
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 22/175 (12%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ +++ K +G G FGEV + N ++ K + K E K
Sbjct: 73 REDFEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEM---------------LKRA 116
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
+++E+ + G + + N ++ G DL LL + ++ ++
Sbjct: 117 ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 176
Query: 616 --LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
IG +L +++ IH YVH D+KP NVLL V+ + + DFG + D
Sbjct: 177 ARFYIGEMVL-AIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMND 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 86 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 144
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 145 LVGENH---LVKVADFGLSRLM--TGDTYTAH 171
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 166
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 167 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 220 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 200 L 200
+
Sbjct: 277 I 277
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGLA +D
Sbjct: 190 DFGLARVLED 199
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGLA +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLED 199
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 56
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 57 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 115
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 164
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 579 GQQEHNGNSYRF-----IIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCG 633
GQ G Y F ++I+ + + LD S + +L +L+ IH G
Sbjct: 78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFG 137
Query: 634 YVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
VH D+KP+N L + +VDFGLA DT
Sbjct: 138 IVHRDVKPSNFLYNRRLKK--YALVDFGLAQGTHDT 171
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 3 EGIVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 62
E +D+ + + Q V ++L L +L+ IH G VH D+KP+N L + +V
Sbjct: 105 ESFLDILNSLSFQEVR-EYMLNL-FKALKRIHQFGIVHRDVKPSNFLYNRRLKK--YALV 160
Query: 63 DFGLASRYKDT 73
DFGLA DT
Sbjct: 161 DFGLAQGTHDT 171
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
R R + +++Y H VH DLK N+LL D + + I DFG ++ + +
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----- 160
Query: 80 HIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
K G+ Y + +G K D+ L L L +GSLP+
Sbjct: 161 ----KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
++ +++Y H VH DLK N+LL D + + I DFG ++ +
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEF 156
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL + +F L + ++ L+++H G V+ DLK N+LL D +
Sbjct: 103 GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH---IK 159
Query: 657 IVDFGLA 663
I DFG+
Sbjct: 160 IADFGMC 166
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++H G V+ DLK N+LL D + I DFG+
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGH---IKIADFGMC 166
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLE 558
+ +G +LG G FG+V V +++ G+K +K+ ++ +R
Sbjct: 18 YILGDTLGVGTFGKV-----KVGKHELTGHKVAVKILNRQKIRSLDVVGKIR-------- 64
Query: 559 AWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHKEFSLKNTLT 617
++ + LK P + +K Q + S F+++ G +L + ++ K +
Sbjct: 65 --REIQNLKLFRHP--HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR 120
Query: 618 IGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
+ +L ++Y H VH DLKP NVLL + I DFGL++ D +
Sbjct: 121 LFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 170
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + L ++Y H VH DLKP NVLL + I DFGL++ D +
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 170
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + +LD + Y+H H DLKP N+ LL + +
Sbjct: 99 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 158
Query: 656 NIVDFGLASR 665
++DFG+A +
Sbjct: 159 KLIDFGIAHK 168
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGL 66
+T ATQ L+ LD + Y+H H DLKP N+ LL + + ++DFG+
Sbjct: 112 LTEDEATQ------FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 67 ASR 69
A +
Sbjct: 166 AHK 168
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + +LD + Y+H H DLKP N+ LL + +
Sbjct: 92 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 656 NIVDFGLASR 665
++DFG+A +
Sbjct: 152 KLIDFGIAHK 161
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGL 66
+T ATQ L+ LD + Y+H H DLKP N+ LL + + ++DFG+
Sbjct: 105 LTEDEATQ------FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 67 ASR 69
A +
Sbjct: 159 AHK 161
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL + +F L + ++ L+++H G V+ DLK N+LL D +
Sbjct: 102 GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH---IK 158
Query: 657 IVDFGLA 663
I DFG+
Sbjct: 159 IADFGMC 165
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L+++H G V+ DLK N+LL D + I DFG+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGH---IKIADFGMC 165
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 84
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 85 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 143
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 144 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 192
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 14 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 58
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 59 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 117
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 118 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 166
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 15 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 59
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 60 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 118
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 119 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 167
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
T+ ++L +L Y+H G +H D+K ++LL +D V + DFG ++ + D K
Sbjct: 145 TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQI--SKDVPKRK 199
Query: 677 IVEKKSAHNGESCLSLRKLFMQKVAFW------CSYVDAAPKYITIS 717
+ +S R L+ +V W VD P Y + S
Sbjct: 200 XLVGTPYWMAPEVIS-RSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY-KDTDDNHKAH 80
V L +L Y+H G +H D+K ++LL +D V + DFG ++ KD
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKD-------- 194
Query: 81 IVEKKSAHNGTLIYTS-LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQPEKV 139
V K+ GT + + V R T DI L ++ + G P+ + P V
Sbjct: 195 -VPKRKXLVGTPYWMAPEVISRSLYATE--VDIWSLGIMVIEMVDGEPPY--FSDSP--V 247
Query: 140 LAMKEELLKDPAKFFTTHYKEPVPDVFVE 168
AMK P K +H PV F+E
Sbjct: 248 QAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 80 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 138
Query: 648 VDSSQAIVNIVDFGLASRYKDTDD 671
+ Q +V + DFGL SRY D+
Sbjct: 139 --NDQGVVKVSDFGL-SRYVLDDE 159
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 30/110 (27%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSA 87
+++EY+ ++H DL N L+ + Q +V + DFGL SRY D+
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYVLDDE------------ 159
Query: 88 HNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPWTAY 132
YTS RG+K R E+L Y+ + G L W Y
Sbjct: 160 ------YTS---SRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 200
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 16 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 60
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 61 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 119
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 120 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 168
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 25/195 (12%)
Query: 483 DPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLF 542
DP P + + + LG G +GEVY KY + V T
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---------KYSLTVAVKT---- 50
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
++ E E K+ +K + P + G Y I +G+ L
Sbjct: 51 ------LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 603 LLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
L + +E + L + + + ++EY+ ++H DL N L+G +V + DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 161
Query: 662 LASRYKDTDDNHKAH 676
L+ T D + AH
Sbjct: 162 LSRLM--TGDTYTAH 174
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 37/178 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 169
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 170 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQK 197
+ + ELL+ K + E P+ E+ + P + ++ Q F Q+
Sbjct: 223 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 53
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 112
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 161
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 590 FIIISKF-GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
+++ K G + + + + F+ + + +L+++H+ G H DLKP N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 649 DSSQAIVNIVDFGLASRYKDTDD 671
+ + V I DF L S K D
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGD 169
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
V++ +L+++H+ G H DLKP N+L + + V I DF L S K D
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
II+++ G L L + F + L + + +++EY+ ++H DL N L+
Sbjct: 95 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV- 153
Query: 648 VDSSQAIVNIVDFGLASRYKDTDD 671
+ Q +V + DFGL SRY D+
Sbjct: 154 --NDQGVVKVSDFGL-SRYVLDDE 174
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
+++EY+ ++H DL N L+ + Q +V + DFGL SRY D+
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGL-SRYVLDDE 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H DL N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G + +V + DFGL+ T D AH
Sbjct: 142 VGENH---LVKVADFGLSRLM--TGDTFTAH 167
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 30/106 (28%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 162
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW 129
+ AH GAK + E LAYN + + G L W
Sbjct: 163 -------TFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 71
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 130
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 179
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIV 655
G +L L E + + +LD + Y+H H DLKP N+ LL + +
Sbjct: 113 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 172
Query: 656 NIVDFGLASR 665
++DFG+A +
Sbjct: 173 KLIDFGIAHK 182
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 8 MTWTNATQNVWLRWVLRLALDSLEYIHHCGYVHADLKPANV-LLGVDSSQAIVNIVDFGL 66
+T ATQ L+ LD + Y+H H DLKP N+ LL + + ++DFG+
Sbjct: 126 LTEDEATQ------FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 67 ASR 69
A +
Sbjct: 180 AHK 182
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 53
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 112
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 161
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H DL N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G + +V + DFGL+ T D AH
Sbjct: 142 VGENH---LVKVADFGLSRLM--TGDTXTAH 167
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 30/106 (28%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 162
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW 129
+ AH GAK + E LAYN + + G L W
Sbjct: 163 -------TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L + +H + +L +++Y H VH DLKP NVLL +
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAK 151
Query: 657 IVDFGLASRYKDTD 670
I DFGL++ D +
Sbjct: 152 IADFGLSNMMSDGE 165
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + L +++Y H VH DLKP NVLL + I DFGL++ D +
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 165
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L + +H + +L +++Y H VH DLKP NVLL +
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAK 151
Query: 657 IVDFGLASRYKDTD 670
I DFGL++ D +
Sbjct: 152 IADFGLSNMMSDGE 165
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
R + + L +++Y H VH DLKP NVLL + I DFGL++ D +
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE 165
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 25/173 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G +GEVY KY + V T E V E K+
Sbjct: 19 LGGGQYGEVYEGVWK---------KYSLTVAVKT---LKEDTMEVE-------EFLKEAA 59
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD-EHKEFSLKNTLTIGSSLL 623
+K + P + G Y I +G+ L L + +E S L + + +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 624 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
++EY+ ++H DL N L+G +V + DFGL+ T D AH
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM--TGDTXTAH 167
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 37/185 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 162
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 163 -------TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 216 PSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
Query: 200 LKMDG 204
+ +G
Sbjct: 273 ISDEG 277
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 46/223 (20%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D +++ +LG G FG+V D +K G +K+ + + Y A
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECID----HKAGGRHVAVKIVKNV-------DRYCEAA 58
Query: 553 KPE-----HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH 607
+ E HL + + + ++ EH+G+ I+ G + E+
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWF------EHHGHI--CIVFELLGLSTYDFIKEN 110
Query: 608 K--EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL-LGVDSSQAI---------- 654
F L + + + S+ ++H H DLKP N+L + D ++A
Sbjct: 111 GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 655 -----VNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSL 692
+ +VDFG A+ DD H + +V + E L+L
Sbjct: 171 LINPDIKVVDFGSAT----YDDEHHSTLVSTRHYRAPEVILAL 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 71
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 130
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 179
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 46/223 (20%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D +++ +LG G FG+V D +K G +K+ + + Y A
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECID----HKAGGRHVAVKIVKNV-------DRYCEAA 58
Query: 553 KPE-----HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH 607
+ E HL + + + ++ EH+G+ I+ G + E+
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWF------EHHGHI--CIVFELLGLSTYDFIKEN 110
Query: 608 K--EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL-LGVDSSQAI---------- 654
F L + + + S+ ++H H DLKP N+L + D ++A
Sbjct: 111 GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 655 -----VNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSL 692
+ +VDFG A+ DD H + +V + E L+L
Sbjct: 171 LINPDIKVVDFGSAT----YDDEHHSTLVXXRHYRAPEVILAL 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGL 66
LR L +L ++H G VH D+KPAN+ LG + + DFGL
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGL 203
Score = 33.9 bits (76), Expect = 0.51, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 483 DPIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLF 542
DP +P + F ++S++ LG G +GEV+ +K DG Y +K S P
Sbjct: 47 DPSRPESFF----QQSFQRLSRLGHGSYGEVFKVR-----SKEDGRLYAVK--RSMSPFR 95
Query: 543 VEQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQK 602
++ + A E EK + P ++ E G Y + G LQ
Sbjct: 96 GPKDRARKLA-----EVGSHEKVGQH---PCCVRLEQAWEEGGILY--LQTELCGPSLQ- 144
Query: 603 LLDEHKEF---SLKNTLTIG--SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
+H E SL G L +L ++H G VH D+KPAN+ LG + +
Sbjct: 145 ---QHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKL 198
Query: 658 VDFGL 662
DFGL
Sbjct: 199 GDFGL 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 607 HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
H + + T+ S+L +L Y+H+ G +H D+K ++LL +S + + DFG ++
Sbjct: 135 HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQ 190
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 26 ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
L +L Y+H+ G +H D+K ++LL +S + + DFG ++
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQ 190
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 490 IFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYV 549
++ S +K ++ K +G G FG+ + + DG +YV+K E N
Sbjct: 18 LYFQSMEKYVRLQK-IGEGSFGKAI-----LVKSTEDGRQYVIK----------EINI-S 60
Query: 550 RCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEH 607
R + E E+ ++ L + P + E NG+ Y I+ + G DL K ++
Sbjct: 61 RMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY---IVMDYCEGGDLFKRINAQ 117
Query: 608 KE--FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
K F L + +L+++H +H D+K N+ L D + V + DFG+A
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT---VQLGDFGIARV 174
Query: 666 YKDTDDNHKAHI 677
T + +A I
Sbjct: 175 LNSTVELARACI 186
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
L W +++ L +L+++H +H D+K N+ L D + V + DFG+A T + +
Sbjct: 128 LDWFVQICL-ALKHVHDRKILHRDIKSQNIFLTKDGT---VQLGDFGIARVLNSTVELAR 183
Query: 79 AHI 81
A I
Sbjct: 184 ACI 186
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 588 YRFIIISKFGSDLQKLLDEHKEFSLKNT--LTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
+++I I + LQ+ + E K+F+ +T+ L ++H VH DLKP N+L
Sbjct: 92 FQYIAIELCAATLQEYV-EQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNIL 150
Query: 646 LGVDSSQAIVN--IVDFGLASR 665
+ + ++ + I DFGL +
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKK 172
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN--IVDFGLASR 69
+L+ L ++H VH DLKP N+L+ + ++ + I DFGL +
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++ K+ + LG+G FGEV+ N + K + + S E N
Sbjct: 8 RETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDAFLAEANLM------- 58
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK-----EF 610
K+L+ L YA+ Q+ II+++ + L+D K +
Sbjct: 59 --------KQLQHQRLVRLYAVVTQEP-------IYIITEYMEN-GSLVDFLKTPSGIKL 102
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
++ L + + + + + +I Y+H +L+ AN+L+ S I DFGLA +D +
Sbjct: 103 TINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILV---SDTLSCKIADFGLARLIEDNE 159
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+ + +I Y+H +L+ AN+L+ S I DFGLA +D +
Sbjct: 116 EGMAFIEERNYIHRNLRAANILV---SDTLSCKIADFGLARLIEDNE 159
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKT 176
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 166
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKT 176
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 166
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKV 200
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 190
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 142 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKV 198
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 153 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 188
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query: 18 WLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
+ +W L L L + H +H DLKP N+L+ + + + + DFGLA + +
Sbjct: 112 YFQWQL---LQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTF 165
Query: 78 KAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGS--LPWTAYEQQ 135
+ +V TL Y + G++T S DI L + TG P T E+Q
Sbjct: 166 SSEVV--------TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ 217
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ + + + + DFGLA +
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAF 158
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 124 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKT 180
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 135 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 170
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 177
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 178 DFGLSRVLED 187
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 187
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 89 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D AH
Sbjct: 148 LVGENH---LVKVADFGLSRLM--TGDTXTAH 174
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G + +V + DFGL SR D
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 169
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 170 -------TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKN 198
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 223 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 20 RWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD---- 75
R+ LR + +Y+H +H DLK N+ L D V I DFGLA++ + +
Sbjct: 118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKV 174
Query: 76 -----NHKAHIVEKKSAHN--------GTLIYTSLVA 99
N+ A V K H+ G ++YT LV
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 627 EYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 665
+Y+H +H DLK N+ L D V I DFGLA++
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLE---VKIGDFGLATK 164
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 591 IIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+KLLD E L++ + LL+ + Y H +H DLKP N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI-- 133
Query: 649 DSSQAIVNIVDFGLASRY 666
+ + + I DFGLA +
Sbjct: 134 -NREGELKIADFGLARAF 150
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L+ + Y H +H DLKP N+L+ + + + I DFGLA + + +V
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV---- 162
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDI 112
TL Y + G+K S DI
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDI 184
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 591 IIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+KLLD E L++ + LL+ + Y H +H DLKP N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI-- 133
Query: 649 DSSQAIVNIVDFGLASRY 666
+ + + I DFGLA +
Sbjct: 134 -NREGELKIADFGLARAF 150
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L+ + Y H +H DLKP N+L+ + + + I DFGLA + + IV
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIV---- 162
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDI 112
TL Y + G+K S DI
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDI 184
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ ++ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 22 VLRLALDSLEYIHH-CGYVHADLKPANVLLGVDSS 55
++R L L+Y+H C +H D+KP N+L+ VD +
Sbjct: 145 IIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDA 179
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 16/171 (9%)
Query: 484 PIKPGAIFVDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFV 543
P+K G +F + V + LG G F V+ D + + K V ++ T
Sbjct: 22 PVKIGDLF----NGRYHVIRKLGWGHFSTVWLCWD-MQGKRFVAMKVVKSAQHYTETALD 76
Query: 544 EQNFYVRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKL 603
E ++C + K+ ++ + M G + ++ G L K
Sbjct: 77 EIKL-LKCVRESDPSDPNKDMVVQLIDDFKISGMNG-------IHVCMVFEVLGHHLLKW 128
Query: 604 L--DEHKEFSLKNTLTIGSSLLDSLEYIHH-CGYVHADLKPANVLLGVDSS 651
+ ++ ++ +I +L L+Y+H C +H D+KP N+L+ VD +
Sbjct: 129 IIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDA 179
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 160
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 161 DFGLSRVLED 170
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 170
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 591 IIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLGV 648
++ DL+KLLD E L++ + LL+ + Y H +H DLKP N+L+
Sbjct: 77 LVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI-- 133
Query: 649 DSSQAIVNIVDFGLASRY 666
+ + + I DFGLA +
Sbjct: 134 -NREGELKIADFGLARAF 150
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L+ + Y H +H DLKP N+L+ + + + I DFGLA + + +V
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV---- 162
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDI 112
TL Y + G+K S DI
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDI 184
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 160
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 161 DFGLSRVLED 170
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 170
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ ++ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ ++ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 503 KSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKK 562
+ LG G FG+V+ A + + K ++ V+ P + + R A E L +
Sbjct: 21 RELGEGAFGKVFLA--ECYNLSPTKDKMLVAVKALKDPTLAARKDFQREA--ELLTNLQH 76
Query: 563 EKKLKTLGL-----PTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH-----KEFSL 612
E +K G+ P + + + N + + G D L+D E L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF----LRAHGPDAMILVDGQPRQAKGELGL 132
Query: 613 KNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
L I S + + Y+ +VH DL N L+G + +V I DFG++ TD
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN---LLVKIGDFGMSRDVYSTD 187
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 620 SSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ ++ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+ LE++H ++ DLKP NVLL D + V I D GLA K K +
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGY 349
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 187
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 188 DFGLSRVLED 197
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 197
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 590 FIIISKFGSD--LQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLL 646
+II+++ + L K L E EFS+ + + + ++Y+ + YVH DL N+L+
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV 180
Query: 647 GVDSSQAIVNIVDFGLASRYKD 668
+S + + DFGL+ +D
Sbjct: 181 ---NSNLVCKVSDFGLSRVLED 199
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ + YVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 199
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 81 YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 139
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 140 --NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 592 IISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSS 651
++SKFG +++ E F L + ++ +++ +H GYVH D+KP N+LL
Sbjct: 151 LLSKFG---ERIPAEMARFYL-------AEIVMAIDSVHRLGYVHRDIKPDNILL---DR 197
Query: 652 QAIVNIVDFG 661
+ + DFG
Sbjct: 198 CGHIRLADFG 207
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 25 LALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
+A+DS +H GYVH D+KP N+LL + + DFG
Sbjct: 173 MAIDS---VHRLGYVHRDIKPDNILL---DRCGHIRLADFG 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
+LE++H G ++ D+K N+LL DS+ +V + DFGL+ + D+ +A+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILL--DSNGHVV-LTDFGLSKEFV-ADETERAY------DF 220
Query: 89 NGTLIYTSLVAHRGAKTT-SRICDIEILAYNLLHLNTGSLPWTA 131
GT+ Y + RG + + D L + L TG+ P+T
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G +L L + + F+ ++ +LE++H G ++ D+K N+LL DS+ +V
Sbjct: 143 GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL--DSNGHVV- 199
Query: 657 IVDFGLASRY 666
+ DFGL+ +
Sbjct: 200 LTDFGLSKEF 209
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ GYVH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL +D
Sbjct: 190 DFGLGRVLED 199
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL +D
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLED 199
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 591 IIISKF--GSDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+I++++ L L H +F++ + + + + Y+ GYVH DL NVL+
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 648 VDSSQAIVNIVDFGLASRYKDTDD 671
S + + DFGL+ +D D
Sbjct: 185 --DSNLVCKVSDFGLSRVLEDDPD 206
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
+LR + Y+ GYVH DL NVL+ S + + DFGL+ +D D
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPD 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 81 YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI- 139
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 140 --NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 156
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 591 IIISKF--GSDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+I++++ L L H +F++ + + + + Y+ GYVH DL NVL+
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 648 VDSSQAIVNIVDFGLASRYKDTDD 671
S + + DFGL+ +D D
Sbjct: 185 --DSNLVCKVSDFGLSRVLEDDPD 206
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
+LR + Y+ GYVH DL NVL+ S + + DFGL+ +D D
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPD 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 95 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 151
Query: 653 AIVNIVDFGLASRYKDTDDNH 673
+V I DFGL DD++
Sbjct: 152 DLVKIGDFGLMRALPQNDDHY 172
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 101 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 157
Query: 653 AIVNIVDFGLASRYKDTDDNH 673
+V I DFGL DD++
Sbjct: 158 DLVKIGDFGLMRALPQNDDHY 178
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 79 YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI- 137
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 138 --NTEGAIKLADFGLARAF 154
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 154
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 22 VLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+L+ +LD ++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 291 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 347
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 674
+ +++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 347
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 25/173 (14%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G +GEVY KY + V T E V E K+
Sbjct: 22 LGGGQYGEVYEGVWK---------KYSLTVAVKT---LKEDTMEVE-------EFLKEAA 62
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLD-EHKEFSLKNTLTIGSSLL 623
+K + P + G Y I +G+ L L + +E + L + + +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 624 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
++EY+ ++H DL N L+G +V + DFGL+ T D AH
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM--TGDTXTAH 170
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGL-SRLMTGD-------------- 165
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 166 -------TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 219 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 275
Query: 200 L 200
+
Sbjct: 276 I 276
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 22/176 (12%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+K+ + + LG G FGEVY N + +K + ++ EQ+ +
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK---TLPEVYSEQDELDFLMEAL 100
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKF-GSDLQKLLDEHK------ 608
+ + + ++ +G+ + ++ RFI++ G DL+ L E +
Sbjct: 101 IISKFNHQNIVRCIGV-SLQSLP----------RFILLELMAGGDLKSFLRETRPRPSQP 149
Query: 609 -EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ + L + + +Y+ ++H D+ N LL + I DFG+A
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 95 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 151
Query: 653 AIVNIVDFGLASRYKDTDDNH 673
+V I DFGL DD++
Sbjct: 152 DLVKIGDFGLMRALPQNDDHY 172
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 91 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 147
Query: 653 AIVNIVDFGLASRYKDTDDNH 673
+V I DFGL DD++
Sbjct: 148 DLVKIGDFGLMRALPQNDDHY 168
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 82 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 140
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 141 --NTEGAIKLADFGLARAF 157
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 157
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 22 VLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+L+ +LD ++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 119 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 175
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 674
+ +++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 175
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 80 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 138
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 139 --NTEGAIKLADFGLARAF 155
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 85 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 143
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 144 --NTEGAIKLADFGLARAF 160
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 160
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 80 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI- 138
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 139 --NTEGAIKLADFGLARAF 155
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 155
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 135 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 194
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 195 ARNCLLTCPGPGRVAKIGDFGMA 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 91 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 147
Query: 653 AIVNIVDFGLASRYKDTDDNH 673
+V I DFGL DD++
Sbjct: 148 DLVKIGDFGLMRALPQNDDHY 168
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 85 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 143
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 144 --NTEGAIKLADFGLARAF 160
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 160
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 81 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 139
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 140 --NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 80 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 138
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 139 --NTEGAIKLADFGLARAF 155
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 135
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 136 --NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 82 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 140
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 141 --NTEGAIKLADFGLARAF 157
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 157
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 41/174 (23%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHL--EAWKK 562
LGSG FG V++A D + +V V+ K E + + W +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEV----------------------VVKFIKKEKVLEDCWIE 69
Query: 563 EKKLKTLGLPTFYAMKGQQEH----------NGNSYRFIIISKFGS--DLQKLLDEHKEF 610
+ KL + L A+ + EH + +++ K GS DL +D H
Sbjct: 70 DPKLGKVTLEI--AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL 127
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
I L+ ++ Y+ +H D+K N+++ D + + ++DFG A+
Sbjct: 128 DEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT---IKLIDFGSAA 178
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 135
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 136 --NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 135
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 136 --NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 81 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 139
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 140 --NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 135
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 136 --NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 590 FIIISKF---GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVL 645
F II++F G+ L L + +E S L + + + ++EY+ ++H +L N L
Sbjct: 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 350
Query: 646 LGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+G + +V + DFGL+ T D + AH
Sbjct: 351 VGENH---LVKVADFGLSRLM--TGDTYTAH 376
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H +L N L+G + +V + DFGL SR D
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 371
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 372 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 425 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481
Query: 200 L 200
+
Sbjct: 482 I 482
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 34/199 (17%)
Query: 492 VDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC 551
++++ K + +GK+LG+G FG V D + + K + Y L + +
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVL---- 57
Query: 552 AKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHN---------GNSYRFIII----SKFGS 598
+H+ K T G + +HN N ++ +I+ +K+ +
Sbjct: 58 ---DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114
Query: 599 DLQKLLDEHKEFSLKNTLTIGSS------------LLDSLEYIHHCGYVHADLKPANVLL 646
+ + + + LK+ + G S L ++ +IH G H D+KP N+L
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL- 173
Query: 647 GVDSSQAIVNIVDFGLASR 665
V+S + + DFG A +
Sbjct: 174 -VNSKDNTLKLCDFGSAKK 191
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASR 69
++ +IH G H D+KP N+L V+S + + DFG A +
Sbjct: 153 AVGFIHSLGICHRDIKPQNLL--VNSKDNTLKLCDFGSAKK 191
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 79 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI- 137
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 138 --NTEGAIKLADFGLARAF 154
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 154
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 135
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 136 --NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 79 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 137
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 138 --NTEGAIKLADFGLARAF 154
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G G FG+V A + ++D MK EY++ K +H + + +
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYAS--------------KDDHRDFAGELE 74
Query: 565 KLKTLGL-PTFYAMKGQQEHNGNSYRFIIISKFGSDL-----QKLLDEHKEFSLKNT--- 615
L LG P + G EH G Y I + G+ L ++L+ F++ N+
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 616 -------LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L + + ++Y+ ++H +L N+L+G + I DFGL+
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG---ENYVAKIADFGLS 186
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 22 VLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+L+ +LD ++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 104 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 160
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 674
+ +++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 160
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 79 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 137
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 138 --NTEGAIKLADFGLARAF 154
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 79 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 137
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 138 --NTEGAIKLADFGLARAF 154
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 22 VLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
+L+ +LD ++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 110 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 166
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 674
+ +++EY+ +VH DL NVL+ D+ + + DFGL T D K
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGK 166
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 168
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 108 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 167
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 168 ARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 208
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 209 ARNCLLTCPGPGRVAKIGDFGMA 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 125 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 184
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 185 ARNCLLTCPGPGRVAKIGDFGMA 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 126 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 185
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 186 ARNCLLTCPGPGRVAKIGDFGMA 208
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 168
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+R L++L Y H +H D+KP VLL + A V + FG+A
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L Y H +H D+KP VLL + A V + FG+A
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 123 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 182
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 183 ARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 115 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 174
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 175 ARNCLLTCPGPGRVAKIGDFGMA 197
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 167
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 168 ARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTL--TIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+++ DL+K +D + L + LL L + H +H DLKP N+L+
Sbjct: 78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI- 136
Query: 648 VDSSQAIVNIVDFGLASRY 666
+++ + + DFGLA +
Sbjct: 137 --NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 24 RLALDS---LEYIH-HCG--YVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
R+AL S L Y+H HC +H D+K AN+LL + +A+V DFGLA + D D H
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVG--DFGLA-KLMDYKDXH 190
Query: 78 KAHIVEKKSAH 88
V H
Sbjct: 191 VXXAVRGXIGH 201
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 613 KNTLTIGSSLLDSLEYIH-HCG--YVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +GS+ L Y+H HC +H D+K AN+LL + +A+V DFGLA + D
Sbjct: 133 RQRIALGSA--RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVG--DFGLA-KLMDY 186
Query: 670 DDNHKAHIVEKKSAHNGESCLSLRK 694
D H V H LS K
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGK 211
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 101 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 157
Query: 653 AIVNIVDFGLASRYKDTDDN 672
+V I DFGL DD+
Sbjct: 158 DLVKIGDFGLMRALPQNDDH 177
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 109 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 168
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 23 LRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+R L++L Y H +H D+KP VLL + A V + FG+A
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+L++L Y H +H D+KP VLL + A V + FG+A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 619 GSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ + +L Y+H V+ DLKP N+LL SQ + + DFGL
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLC 186
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H V+ DLKP N+LL SQ + + DFGL
Sbjct: 151 ALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLC 186
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 100 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 159
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 160 ARNCLLTCPGPGRVAKIGDFGMA 182
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 589 RFIIISKF-GSDLQKLLDEHK-------EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLK 640
RFI++ G DL+ L E + ++ + L + + +Y+ ++H D+
Sbjct: 123 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 182
Query: 641 PANVLLGVDSSQAIVNIVDFGLA 663
N LL + I DFG+A
Sbjct: 183 ARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 593 ISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQ 652
++ GS L +L F L + + + Y+ ++H DL N+LL +++
Sbjct: 91 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATR 147
Query: 653 AIVNIVDFGLASRYKDTDDN 672
+V I DFGL DD+
Sbjct: 148 DLVKIGDFGLMRALPQNDDH 167
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 20/168 (11%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
+G+ +G G FGEV+S ++ V +K T P ++ F
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLV-----AVKSCRETLPPDLKAKFL------------ 160
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGS 620
++ + LK P + G Y + + + G L L E +K L +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+EY+ +H DL N L+ + + ++ I DFG++ D
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 584 NGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPAN 643
NGN R + +GSDL + S + L I L Y+H +H D+K N
Sbjct: 119 NGNLKRHL----YGSDLPTM-----SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 644 VLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVE 679
+LL + I DFG++ + + H +V+
Sbjct: 170 ILL---DENFVPKITDFGISKKGTELGQTHLXXVVK 202
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 19 LRWVLRL-----ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 73
+ W RL A L Y+H +H D+K N+LL + I DFG++ + +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTEL 192
Query: 74 DDNHKAHIVEKKSAHNGTLIY 94
H +V+ GTL Y
Sbjct: 193 GQTHLXXVVK------GTLGY 207
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL---FVEQN----FYVRCAKPEH- 556
+GSG FG V+ ++DG Y +K S PL EQN Y +H
Sbjct: 17 IGSGEFGSVFKCV-----KRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 557 -----LEAWKKEKKLKTLGLPTFYAMKGQQEH-NGNSYRFIIISKFGSDLQKLLDEHKEF 610
AW ++ M Q E+ NG S I + +++ KE
Sbjct: 70 HVVRYFSAWAEDDH-----------MLIQNEYCNGGSLADAISENY-----RIMSYFKEA 113
Query: 611 SLKNTL-TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
LK+ L +G L YIH VH D+KP+N+ + S +I N AS D
Sbjct: 114 ELKDLLLQVGRGL----RYIHSMSLVHMDIKPSNIFI---SRTSIPNA-----ASEEGDE 161
Query: 670 DD 671
DD
Sbjct: 162 DD 163
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ +++ K +G G FGEV + N +KV K + K E K
Sbjct: 73 REDFEILKVIGRGAFGEV-AVVKLKNADKVFAMKILNKWEM---------------LKRA 116
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLL--------DEH 607
+++E+ + G + + N+ ++ G DL LL +E
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
F L + ++ +++ +H YVH D+KP N+L+ ++ + + DFG
Sbjct: 177 ARFYL-------AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH---IRLADFG 220
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
Query: 25 LALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 65
+A+DS+ +H YVH D+KP N+L+ ++ + + DFG
Sbjct: 186 IAIDSVHQLH---YVHRDIKPDNILMDMNGH---IRLADFG 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 591 IIISKFGSDLQKLLDEHKEF-SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
++ DL++ LD+ ++ N LL L Y H +H DLKP N+L+
Sbjct: 77 LVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI--- 133
Query: 650 SSQAIVNIVDFGLA 663
+ + + + DFGLA
Sbjct: 134 NERGELKLADFGLA 147
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L L Y H +H DLKP N+L+ + + + + DFGLA
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLA 147
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL---FVEQN----FYVRCAKPEH- 556
+GSG FG V+ ++DG Y +K S PL EQN Y +H
Sbjct: 17 IGSGEFGSVFKCV-----KRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 557 -----LEAWKKEKKLKTLGLPTFYAMKGQQEH-NGNSYRFIIISKFGSDLQKLLDEHKEF 610
AW ++ + Q E+ NG S I + +++ KE
Sbjct: 70 HVVRYFSAWAEDDHMLI-----------QNEYCNGGSLADAISENY-----RIMSYFKEA 113
Query: 611 SLKNTL-TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
LK+ L +G L YIH VH D+KP+N+ + S +I N AS D
Sbjct: 114 ELKDLLLQVGRGL----RYIHSMSLVHMDIKPSNIFI---SRTSIPNA-----ASEEGDE 161
Query: 670 DD 671
DD
Sbjct: 162 DD 163
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 54
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L +HKE
Sbjct: 55 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERID 113
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H +L N+L+ ++ V I DFGL
Sbjct: 114 HIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV---ENENRVKIGDFGLT 162
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L + + + ++EY+ ++H DL N L+G +V + DFGL+ T D + A
Sbjct: 133 LYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHVVKVADFGLSRLM--TGDTYTA 187
Query: 676 H 676
H
Sbjct: 188 H 188
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 30/106 (28%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H DL N L+G +V + DFGL SR D
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVG---ENHVVKVADFGL-SRLMTGD-------------- 183
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW 129
+ AH GAK + E LAYN + + G L W
Sbjct: 184 -------TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLW 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL---FVEQN----FYVRCAKPEH- 556
+GSG FG V+ ++DG Y +K S PL EQN Y +H
Sbjct: 15 IGSGEFGSVFKCV-----KRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHS 67
Query: 557 -----LEAWKKEKKLKTLGLPTFYAMKGQQEH-NGNSYRFIIISKFGSDLQKLLDEHKEF 610
AW ++ M Q E+ NG S I + +++ KE
Sbjct: 68 HVVRYFSAWAEDDH-----------MLIQNEYCNGGSLADAISENY-----RIMSYFKEA 111
Query: 611 SLKNTL-TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
LK+ L +G L YIH VH D+KP+N+ + S +I N AS D
Sbjct: 112 ELKDLLLQVGRGL----RYIHSMSLVHMDIKPSNIFI---SRTSIPNA-----ASEEGDE 159
Query: 670 DD 671
DD
Sbjct: 160 DD 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 85 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 143
Query: 645 LLGVDSSQAIVNIVDFGLA 663
L+G + +V + DFGL+
Sbjct: 144 LVGENH---LVKVADFGLS 159
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++EY+ ++H DL N L+G + +V + DFGL+
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLS 159
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPL---FVEQN----FYVRCAKPEH- 556
+GSG FG V+ ++DG Y +K S PL EQN Y +H
Sbjct: 19 IGSGEFGSVFKCV-----KRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 557 -----LEAWKKEKKLKTLGLPTFYAMKGQQEH-NGNSYRFIIISKFGSDLQKLLDEHKEF 610
AW ++ + Q E+ NG S I + +++ KE
Sbjct: 72 HVVRYFSAWAEDDHMLI-----------QNEYCNGGSLADAISENY-----RIMSYFKEA 115
Query: 611 SLKNTL-TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
LK+ L +G L YIH VH D+KP+N+ + S +I N AS D
Sbjct: 116 ELKDLLLQVGRGL----RYIHSMSLVHMDIKPSNIFI---SRTSIPNA-----ASEEGDE 163
Query: 670 DD 671
DD
Sbjct: 164 DD 165
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + + Y+ GYVH DL N+L+ +S + +
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV---NSNLVCKVS 187
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 188 DFGLSRVIED 197
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR + Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVIED 197
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 20/168 (11%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
+G+ +G G FGEV+S ++ V +K T P ++ F
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLV-----AVKSCRETLPPDLKAKFL------------ 160
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGS 620
++ + LK P + G Y + + + G L L E +K L +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+EY+ +H DL N L+ + + ++ I DFG++ D
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H +L N
Sbjct: 288 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 346
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 347 LVGENH---LVKVADFGLSRLM--TGDTYTAH 373
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H +L N L+G + +V + DFGL SR D
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 368
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 369 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 421
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 422 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 478
Query: 200 L 200
+
Sbjct: 479 I 479
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H DL N
Sbjct: 86 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 144
Query: 645 LLGVDSSQAIVNIVDFGLA 663
L+G +V + DFGL+
Sbjct: 145 LVG---ENHLVKVADFGLS 160
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++EY+ ++H DL N L+G +V + DFGL+
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS 160
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
LL L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 153
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
L L + H +H DLKP N+L+ +++ + + DFGLA +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAF 153
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 25/166 (15%)
Query: 499 WKVGKSLGSGGFGEVYSATDDVNDNKVDG---YKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+++G+ LG G FG VY A + + V +K ++ E L E P
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 556 HLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNT 615
L + + + L YA +G+ L K L + F + T
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGE-------------------LYKELQKSCTFDEQRT 125
Query: 616 LTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFG 661
TI L D+L Y H +H D+KP N+ + + + I DFG
Sbjct: 126 ATIMEELADALMYCHGKKVIHRDIKPENL---LLGLKGELKIADFG 168
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 24 RLALDS---LEYIH-HCG--YVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNH 77
R+AL S L Y+H HC +H D+K AN+LL + +A+V DFGLA + D D H
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVG--DFGLA-KLMDYKDXH 198
Query: 78 KAHIVEKKSAH 88
V H
Sbjct: 199 VXXAVRGTIGH 209
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 613 KNTLTIGSSLLDSLEYIH-HCG--YVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
+ + +GS+ L Y+H HC +H D+K AN+LL + +A+V DFGLA + D
Sbjct: 141 RQRIALGSA--RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVG--DFGLA-KLMDY 194
Query: 670 DDNHKAHIVEKKSAHNGESCLSLRK 694
D H V H LS K
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGK 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 23/172 (13%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
++ K + LG G FG V D + V K+++ST E
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EE 56
Query: 556 HLEAWKKEKK-LKTLGLPTFYAMKGQQEHNGNSYRFIIIS--KFGSDLQKLLDEHKE-FS 611
HL +++E + LK+L KG G +I+ +GS L+ L H E
Sbjct: 57 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQAHAERID 115
Query: 612 LKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L S + +EY+ Y+H DL N+L+ ++ V I DFGL
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 164
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 176
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
+F++ + + + ++Y+ GYVH DL N+L+ +S + + DFGL+ +D
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 176
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ G+VH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ G+VH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNT-----LTIGSSLLDSLEYIHHCGYVHADLKPANV 644
F II++F + LLD +E + + L + + + ++EY+ ++H +L N
Sbjct: 330 FYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 388
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
L+G + +V + DFGL+ T D + AH
Sbjct: 389 LVGENH---LVKVADFGLSRLM--TGDTYTAH 415
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 37/181 (20%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++EY+ ++H +L N L+G + +V + DFGL SR D
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGL-SRLMTGD-------------- 410
Query: 89 NGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNT-----GSLPW--TAYEQQPEKVLA 141
+ AH GAK + E LAYN + + G L W Y P +
Sbjct: 411 -------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 463
Query: 142 MKE--ELLKDPAKFFTTHYKEPVPDVFVEMFKYIASTKFEVAPDYDKLKQMFVKALQKNG 199
+ + ELL+ K + E P+ E+ + P + ++ Q F Q++
Sbjct: 464 LSQVYELLE---KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 520
Query: 200 L 200
+
Sbjct: 521 I 521
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 597 GSDLQKLLD-EHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIV 655
GS L K L + +F + + I ++Y+H +H D+K N+ L V
Sbjct: 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTV 171
Query: 656 NIVDFGLAS 664
I DFGLA+
Sbjct: 172 KIGDFGLAT 180
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA---SRYKDTDDNHK 78
+ R ++Y+H +H D+K N+ L V I DFGLA SR+ +
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQ--- 190
Query: 79 AHIVEKKSAHNGTLIYTS--LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWT 130
VE+ + G++++ + ++ + S D+ L L TG LP++
Sbjct: 191 ---VEQPT---GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 40 HADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGTLIYTSLVA 99
H D+KP N+L+ D +VDFG+AS D + V GTL Y +
Sbjct: 157 HRDVKPENILVSADD---FAYLVDFGIASATTDEKLTQLGNTV-------GTLYYXAPER 206
Query: 100 HRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
+ T R DI L L TGS P+
Sbjct: 207 FSESHATYR-ADIYALTCVLYECLTGSPPY 235
Score = 29.6 bits (65), Expect = 8.8, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 636 HADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
H D+KP N+L+ D +VDFG+AS D
Sbjct: 157 HRDVKPENILVSADD---FAYLVDFGIASATTD 186
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 187 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 241
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 242 MKIADFGLARDINNID 257
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 618 IGSSLLDSLEYIHH-CGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
I S++ +LE++H +H D+KP+NVL+ ++ V + DFG++ D+
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDS 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTDDNHK 674
+ I DFGLA + D K
Sbjct: 196 MKIADFGLARDINNIDXXKK 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 501 VGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAW 560
+GK LG G FG+V A + V +K + V E++ ++ E ++
Sbjct: 39 LGKPLGEGAFGQVVMA-EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 561 KKEKKLKTL------GLPTF----YAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEF 610
K K + TL P + YA KG + R + ++ D+ ++ +E F
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-EYSYDINRVPEEQMTF 156
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 670
K+ ++ L +EY+ +H DL NVL+ + ++ I DFGLA + D
Sbjct: 157 --KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 18/162 (11%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
LG G FG+V A D K Y +K+ V Q+ V C E ++
Sbjct: 27 LGKGSFGKVMLA-----DRKGTEELYAIKILKKD---VVIQDDDVECTMVE-------KR 71
Query: 565 KLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLD 624
L L P F + F++ G DL + + +F + + +
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI 131
Query: 625 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
L ++H G ++ DLK NV+L S+ + I DFG+ +
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEH 170
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 23/163 (14%)
Query: 505 LGSGGFGEV-YSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKE 563
LG G FG V D + DN TG L + ++ + P+ +++E
Sbjct: 31 LGKGNFGSVELCRYDPLGDN--------------TGALVAVKQ--LQHSGPDQQRDFQRE 74
Query: 564 KK-LKTLGLPTFYAMKGQQEHNG-NSYRFIIISKFGSDLQKLLDEHK-EFSLKNTLTIGS 620
+ LK L +G G S R ++ L+ L H+ L S
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 134
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ +EY+ VH DL N+L+ S+A V I DFGLA
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLA 174
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+EY+ VH DL N+L+ S+A V I DFGLA
Sbjct: 139 GMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLA 174
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 128 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNV 182
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 183 MKIADFGLARDINNID 198
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MRIADFGLARDINNID 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 133 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 187
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 188 MKIADFGLARDINNID 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 585 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV 644
G F+ + KF DL L+ L +L Y+ +VH D+ NV
Sbjct: 475 GELRSFLQVRKFSLDLASLI------------LYAYQLSTALAYLESKRFVHRDIAARNV 522
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ SS V + DFGL SRY + +KA
Sbjct: 523 LV---SSNDCVKLGDFGL-SRYMEDSTYYKA 549
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 503 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 549
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MKIADFGLARDINNID 211
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 130 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 184
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 185 MKIADFGLARDINNID 200
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MKIADFGLARDINNID 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MKIADFGLARDINNID 211
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 22 VLRLALDSLEYIH-HCGYVHADLKPANVLLGVD 53
+++ L L+Y+H C +H D+KP N+LL V+
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 618 IGSSLLDSLEYIH-HCGYVHADLKPANVLLGVD 649
I +L L+Y+H C +H D+KP N+LL V+
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MKIADFGLARDINNID 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.1 bits (74), Expect = 0.83, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G LQ + + ++K+ ++ G + +EY+ +VH DL N +L V
Sbjct: 108 GDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVK 164
Query: 657 IVDFGLA 663
+ DFGLA
Sbjct: 165 VADFGLA 171
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 595 KFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAI 654
++ D+ ++ +E F K+ ++ L +EY+ +H DL NVL+ + +
Sbjct: 141 EYSYDINRVPEEQMTF--KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNV 195
Query: 655 VNIVDFGLASRYKDTD 670
+ I DFGLA + D
Sbjct: 196 MKIADFGLARDINNID 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+++ + + H +H D+KP N+L+ S +V + DFG A
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFA 171
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
++ + + H +H D+KP N+L+ S +V + DFG A
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFA 171
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 22 VLRLALDSLEYIH-HCGYVHADLKPANVLLGVD 53
+++ L L+Y+H C +H D+KP N+LL V+
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 618 IGSSLLDSLEYIH-HCGYVHADLKPANVLLGVD 649
I +L L+Y+H C +H D+KP N+LL V+
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 607 HKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 666
++ + K+ ++ L +EY+ +H DL NVL+ + ++ I DFGLA
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDI 207
Query: 667 KDTDDNHK 674
+ D K
Sbjct: 208 NNIDXXKK 215
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 585 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV 644
G F+ + KF DL L+ + S +L Y+ +VH D+ NV
Sbjct: 95 GELRSFLQVRKFSLDLASLILYAYQLS------------TALAYLESKRFVHRDIAARNV 142
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ SS V + DFGL SRY + KA
Sbjct: 143 LV---SSNDCVKLGDFGL-SRYMEDSTXXKA 169
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + KA
Sbjct: 123 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTXXKA 169
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
S L I + + Y+ +VH DL N L+G +V I DFGL SR +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGL-SRNIYS 226
Query: 670 DDNHKA 675
D +KA
Sbjct: 227 ADYYKA 232
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 492 VDSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRC 551
V+ + +V + L GGF VY A DV + K ++ E +++ +++
Sbjct: 23 VELGELRLRVRRVLAEGGFAFVYEA-QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK- 80
Query: 552 AKPEHLEAWKKEKKLKTLGLPTFY-----AMKGQQEHNGNSYRFIIISKFGS----DLQK 602
K G P A G++E + F+++++ + K
Sbjct: 81 ---------------KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK 125
Query: 603 LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCG--YVHADLKPANVLLGVDSSQAIVNIVDF 660
++ S L I +++++H +H DLK N+LL S+Q + + DF
Sbjct: 126 KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDF 182
Query: 661 GLA---SRYKD 668
G A S Y D
Sbjct: 183 GSATTISHYPD 193
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 37 GYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
G +H D+KP+N+LL + + + DFG++ R D
Sbjct: 145 GVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD 177
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 633 GYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
G +H D+KP+N+LL + + + DFG++ R D
Sbjct: 145 GVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD 177
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 502 GKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAK-PEHLEAW 560
G+ LG G FG+ T +V K +++ + T F+++ +RC + P L+
Sbjct: 15 GEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 561 KKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGS 620
K K L T Y G + R II K +D +S + ++
Sbjct: 74 GVLYKDKRLNFITEYI-------KGGTLRGII---------KSMDSQYPWSQR--VSFAK 115
Query: 621 SLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ + Y+H +H DL N L V ++ +V + DFGLA
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCL--VRENKNVV-VADFGLA 155
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 618 IGSSLLDSLEYIHH-CGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
I S++ +LE++H +H D+KP+NVL+ ++ V + DFG++ D
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVD 162
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYV-HADLKPANVLLGVDSSQAIV 655
G L ++L E K + + ++L L Y+ + H D+KP+N+L+ +S+ +
Sbjct: 98 GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEI 154
Query: 656 NIVDFGLASRYKDTDDN 672
+ DFG++ + D+ N
Sbjct: 155 KLCDFGVSGQLIDSMAN 171
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 600 LQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L+ L H+ L S + +EY+ VH DL N+L+ S+A V I
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIA 157
Query: 659 DFGLA 663
DFGLA
Sbjct: 158 DFGLA 162
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 600 LQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L+ L H+ L S + +EY+ VH DL N+L+ S+A V I
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIA 153
Query: 659 DFGLA 663
DFGLA
Sbjct: 154 DFGLA 158
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 591 IIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLG 647
+II++F GS L +F++ + + + ++Y+ YVH DL N+L+
Sbjct: 110 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV- 168
Query: 648 VDSSQAIVNIVDFGLASRYKDTD 670
+S + + DFGL SR+ + D
Sbjct: 169 --NSNLVCKVSDFGL-SRFLEDD 188
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTD 74
+LR ++Y+ YVH DL N+L+ +S + + DFGL SR+ + D
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGL-SRFLEDD 188
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 600 LQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L+ L H+ L S + +EY+ VH DL N+L+ S+A V I
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIA 156
Query: 659 DFGLA 663
DFGLA
Sbjct: 157 DFGLA 161
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 601 QKLLDEHKEF---SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNI 657
QK L+E ++ + ++ L + +E++ VH DL NVL+ + +V I
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKI 213
Query: 658 VDFGLA 663
DFGLA
Sbjct: 214 CDFGLA 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 585 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV 644
G F+ + KF DL L+ + S +L Y+ +VH D+ NV
Sbjct: 95 GELRSFLQVRKFSLDLASLILYAYQLS------------TALAYLESKRFVHRDIAARNV 142
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ S+ V + DFGL SRY + +KA
Sbjct: 143 LV---SATDCVKLGDFGL-SRYMEDSTYYKA 169
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ S+ V + DFGL SRY + +KA
Sbjct: 123 ALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGL-SRYMEDSTYYKA 169
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 617 TIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+I L ++ + H +H D+KP N+L+ + +++ + DFG A
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFA 149
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 26 ALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L ++ + H +H D+KP N+L+ + +++ + DFG A
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFA 149
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 15 QNVWLRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+ VW ++ ++L +LE++H +H D+KPANV + ++ +V + D GL
Sbjct: 136 RTVW-KYFVQLC-SALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLG 183
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
L +LE++H +H D+KPANV + ++ +V + D GL
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLG 183
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 123 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 179
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 180 LGDFGL-SRYMEDSTYYKA 197
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 151 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 197
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 16 NVWLRWVLRLALDSLEYIHHCGYV---HADLKPANVLL-----GVDSSQAIVNIVDFGLA 67
++ + W +++A + Y+H V H DLK +N+L+ D S I+ I DFGLA
Sbjct: 105 DILVNWAVQIA-RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 68 SRYKDT 73
+ T
Sbjct: 164 REWHRT 169
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 505 LGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPEHLEAWKKEK 564
+G GGFG+VY A ++ V ++ + S + +E ++E
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDIS-----------------QTIENVRQEA 57
Query: 565 KL-KTLGLPTFYAMKGQQEHNGNSYRFIIISKF--GSDLQKLLDEHKEFSLKNTLTIGSS 621
KL L P A++G N ++ +F G L ++L K +
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPN---LCLVMEFARGGPLNRVL-SGKRIPPDILVNWAVQ 113
Query: 622 LLDSLEYIHHCGYV---HADLKPANVLL-----GVDSSQAIVNIVDFGLASRYKDT 669
+ + Y+H V H DLK +N+L+ D S I+ I DFGLA + T
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 100 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 156
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 157 LGDFGL-SRYMEDSTYYKA 174
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 128 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 174
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 97 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 153
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 154 LGDFGL-SRYMEDSTYYKA 171
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 125 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 171
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 600 LQKLLDEH-KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIV 658
L L +H +F++ + + + ++Y+ G VH DL N+L+ +S + +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI---NSNLVCKVS 189
Query: 659 DFGLASRYKD 668
DFGL+ +D
Sbjct: 190 DFGLSRVLED 199
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ G VH DL N+L+ +S + + DFGL+ +D
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLED 199
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 98 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 154
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 155 LGDFGL-SRYMEDSTYYKA 172
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 126 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 172
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 151
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 152 LGDFGL-SRYMEDSTYYKA 169
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 123 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 169
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L + S + + Y+ +VH DL N L+G +V I DFG++ T
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYST 211
Query: 670 D 670
D
Sbjct: 212 D 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 92 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 148
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 149 LGDFGL-SRYMEDSTYYKA 166
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 120 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 166
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 598 SDLQKLLDEHK-EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
+L+ L K L + + L +L Y+ +VH D+ NVL+ SS V
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVK 151
Query: 657 IVDFGLASRYKDTDDNHKA 675
+ DFGL SRY + +KA
Sbjct: 152 LGDFGL-SRYMEDSTYYKA 169
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ SS V + DFGL SRY + +KA
Sbjct: 123 ALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL-SRYMEDSTYYKA 169
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 76/218 (34%), Gaps = 36/218 (16%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++ +++ +LG G FG+V D K + V +E N +
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 74
Query: 553 KPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH--KEF 610
+ + KE K + + ++ G + I G + + L E+ + +
Sbjct: 75 EKD------KENKFLCVLMSDWFNFHG--------HMCIAFELLGKNTFEFLKENNFQPY 120
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN-------------- 656
L + + L +L ++H H DLKP N+L + + N
Sbjct: 121 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 657 --IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSL 692
+ DFG A+ D H IV + E L L
Sbjct: 181 IRVADFGSAT----FDHEHHTTIVATRHYRPPEVILEL 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYK 667
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLAR--- 198
Query: 668 DTDDNHKAHIVEKKSAHNG 686
D H HI K NG
Sbjct: 199 ---DIH--HIDXXKKTTNG 212
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
+EY+ +H DL NVL+ D+ ++ I DFGLA D H HI K
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLAR------DIH--HIDXXKKTT 210
Query: 89 NGTL 92
NG L
Sbjct: 211 NGRL 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
F+I G DL + ++ ++ + + +L Y+H G ++ DLK NVLL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--- 154
Query: 650 SSQAIVNIVDFGLA 663
S+ + + D+G+
Sbjct: 155 DSEGHIKLTDYGMC 168
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H G ++ DLK NVLL S+ + + D+G+
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMC 168
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 589 RFIIISKF--GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLL 646
R + +F G DL + + + F + ++ +L ++H G ++ DLK NVLL
Sbjct: 98 RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157
Query: 647 GVDSSQAIVNIVDFGLA 663
+ + DFG+
Sbjct: 158 ---DHEGHCKLADFGMC 171
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 585 GNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANV 644
G F+ + KF DL L+ L +L Y+ +VH D+ NV
Sbjct: 475 GELRSFLQVRKFSLDLASLI------------LYAYQLSTALAYLESKRFVHRDIAARNV 522
Query: 645 LLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 675
L+ S+ V + DFGL SRY + +KA
Sbjct: 523 LV---SATDCVKLGDFGL-SRYMEDSTYYKA 549
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKA 79
+L Y+ +VH D+ NVL+ S+ V + DFGL SRY + +KA
Sbjct: 503 ALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGL-SRYMEDSTYYKA 549
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
F+I G DL + ++ ++ + + +L Y+H G ++ DLK NVLL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--- 186
Query: 650 SSQAIVNIVDFGLA 663
S+ + + D+G+
Sbjct: 187 DSEGHIKLTDYGMC 200
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H G ++ DLK NVLL S+ + + D+G+
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMC 200
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLAS 664
+ T I ++ + Y+H G +H DLK NV D+ + + I DFGL S
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF--YDNGKVV--ITDFGLFS 177
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 76/218 (34%), Gaps = 36/218 (16%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++ +++ +LG G FG+V D K + V +E N +
Sbjct: 24 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 83
Query: 553 KPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH--KEF 610
+ + KE K + + ++ G + I G + + L E+ + +
Sbjct: 84 EKD------KENKFLCVLMSDWFNFHG--------HMCIAFELLGKNTFEFLKENNFQPY 129
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN-------------- 656
L + + L +L ++H H DLKP N+L + + N
Sbjct: 130 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 657 --IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSL 692
+ DFG A+ D H IV + E L L
Sbjct: 190 IRVADFGSAT----FDHEHHTTIVATRHYRPPEVILEL 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 576 AMKGQQEHNG---------NSYRFIIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLL 623
++ GQ EH NS +I+++F G+ L +F++ + + +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIA 126
Query: 624 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 676
+ Y+ YVH DL N+L+ +S + + DFGL SR+ + + + +
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILV---NSNLVCKVSDFGL-SRFLEENSSDPTY 175
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAH 80
+LR + Y+ YVH DL N+L+ +S + + DFGL SR+ + + + +
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLAARNILV---NSNLVCKVSDFGL-SRFLEENSSDPTY 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
F+I G DL + ++ ++ + + +L Y+H G ++ DLK NVLL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--- 143
Query: 650 SSQAIVNIVDFGLA 663
S+ + + D+G+
Sbjct: 144 DSEGHIKLTDYGMC 157
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H G ++ DLK NVLL S+ + + D+G+
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMC 157
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
LL L + H +H DLKP N+L+ + + + DFGLA + + A +V
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVV 163
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 27 LDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKS 86
L L + H +H DLKP N+L+ + + + DFGLA + + A +V
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVV---- 163
Query: 87 AHNGTLIYTSLVAHRGAKTTSRICDI 112
TL Y GAK S D+
Sbjct: 164 ----TLWYRPPDVLFGAKLYSTSIDM 185
>pdb|1TQI|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase
pdb|1TQM|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase Bound To Amppnp
pdb|1ZAO|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Atp And Manganese Ions
pdb|1ZAR|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Adp And Manganese Ions
Length = 282
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 549 VRCAKPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHK 608
+R A+ E ++ +KL+ L +P YA +G + L +L+D +
Sbjct: 148 IRSARNE----FRALQKLQGLAVPKVYAWEGN-----------------AVLMELIDAKE 186
Query: 609 EFSLK--NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDF 660
+ ++ N + +L+ + +H G VH DL NVL+ S+ + I+DF
Sbjct: 187 LYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDF 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 590 FIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVD 649
F+I G DL + ++ ++ + + +L Y+H G ++ DLK NVLL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--- 139
Query: 650 SSQAIVNIVDFGLA 663
S+ + + D+G+
Sbjct: 140 DSEGHIKLTDYGMC 153
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
+L Y+H G ++ DLK NVLL S+ + + D+G+
Sbjct: 118 ALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMC 153
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 618 IGSSLLDSLEYIHH-CGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
I S++ +LE++H +H D+KP+NVL+ ++ V DFG++ D
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKXCDFGISGYLVD 189
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 586 NSYRFIIISKF---GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPA 642
NS +I+++F G+ L +F++ + + + + Y+ YVH DL
Sbjct: 88 NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAAR 147
Query: 643 NVLLGVDSSQAIVNIVDFGLASRY 666
N+L+ +S + + DFGL SR+
Sbjct: 148 NILV---NSNLVCKVSDFGL-SRF 167
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRY 70
+LR + Y+ YVH DL N+L+ +S + + DFGL SR+
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILV---NSNLVCKVSDFGL-SRF 167
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 39 VHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAHNGTLIYTS-- 96
+H DLKPANV L D Q V + DFGLA +D K + GT Y S
Sbjct: 138 LHRDLKPANVFL--DGKQN-VKLGDFGLARILNHDEDFAKEFV--------GTPYYMSPE 186
Query: 97 LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQQ 135
+ S I + L Y L L P+TA+ Q+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMP---PFTAFSQK 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 182
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 186
>pdb|1ITW|A Chain A, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Isocitrate And Mn
pdb|1ITW|B Chain B, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Isocitrate And Mn
pdb|1ITW|C Chain C, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Isocitrate And Mn
pdb|1ITW|D Chain D, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Isocitrate And Mn
pdb|1J1W|A Chain A, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Nadp+
pdb|1J1W|B Chain B, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Nadp+
pdb|1J1W|C Chain C, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Nadp+
pdb|1J1W|D Chain D, Crystal Structure Of The Monomeric Isocitrate
Dehydrogenase In Complex With Nadp+
Length = 741
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 554 PEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYR----FIIISKFGSDLQKLLDEHK 608
P+H++ + +E L+ L F A+ EH GN+Y+ ++ S K+LD +K
Sbjct: 587 PKHVQQFLEEGYLRWDSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNK 645
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 190
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 189
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 39 VHADLKPANVLLGVDSSQAIVNIVDFG 65
+H DLKP N+LL + ++ + IVDFG
Sbjct: 162 IHCDLKPENILL-CNPKRSAIKIVDFG 187
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 635 VHADLKPANVLLGVDSSQAIVNIVDFG 661
+H DLKP N+LL + ++ + IVDFG
Sbjct: 162 IHCDLKPENILL-CNPKRSAIKIVDFG 187
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 29 SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIVEKKSAH 88
++++ H G VH D+K N+L +D + ++DFG + D E +
Sbjct: 151 AIQHCHSRGVVHRDIKDENIL--IDLRRGCAKLIDFGSGALLHD----------EPYTDF 198
Query: 89 NGTLIYTS---LVAHRGAKTTSRICDIEILAYNLLHLNTGSLPW 129
+GT +Y+ + H+ + + + IL Y+++ G +P+
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV---CGDIPF 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 197
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 197
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 39 VHADLKPANVLLGVDSSQAIVNIVDFG 65
+H DLKP N+LL + ++ + IVDFG
Sbjct: 181 IHCDLKPENILL-CNPKRSAIKIVDFG 206
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 635 VHADLKPANVLLGVDSSQAIVNIVDFG 661
+H DLKP N+LL + ++ + IVDFG
Sbjct: 181 IHCDLKPENILL-CNPKRSAIKIVDFG 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 5 IVDMTWTNATQNVWLRWVLRLALDSLEYIHHCGYV-HADLKPANVLLGVDSSQAIVNIVD 63
++D +T ++ +++ L+S YIH+ + H D+KP+N+L+ V + D
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSD 195
Query: 64 FG 65
FG
Sbjct: 196 FG 197
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 609 EFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 668
E + + ++ + ++L+++H H D++P N++ S I I++FG A + K
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI-KIIEFGQARQLKP 156
Query: 669 TDD 671
D+
Sbjct: 157 GDN 159
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 28 DSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDD 75
++L+++H H D++P N++ S I I++FG A + K D+
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQTRRSSTI-KIIEFGQARQLKPGDN 159
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 197
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 76/218 (34%), Gaps = 36/218 (16%)
Query: 493 DSAKKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCA 552
D ++ +++ +LG G FG+V D K + V +E N +
Sbjct: 47 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 106
Query: 553 KPEHLEAWKKEKKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEH--KEF 610
+ + KE K + + ++ G + I G + + L E+ + +
Sbjct: 107 EKD------KENKFLCVLMSDWFNFHG--------HMCIAFELLGKNTFEFLKENNFQPY 152
Query: 611 SLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN-------------- 656
L + + L +L ++H H DLKP N+L + + N
Sbjct: 153 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 657 --IVDFGLASRYKDTDDNHKAHIVEKKSAHNGESCLSL 692
+ DFG A+ D H IV + E L L
Sbjct: 213 IRVADFGSAT----FDHEHHTTIVATRHYRPPEVILEL 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 608 KEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
++ S K+ ++ + +EY+ +H DL NVL+ D+ ++ I DFGLA
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLA 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 75/204 (36%), Gaps = 42/204 (20%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+K+ +GK+LG G FG+V AT + + Y+T V A P
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKAT---------AFHLKGRAGYTT----VAVKMLKENASPS 68
Query: 556 HLEAWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE----- 609
L E LK + P + G +G + +K+GS L+ L E ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS-LRGFLRESRKVGPGY 127
Query: 610 -------------------FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDS 650
++ + ++ + ++Y+ VH DL N+L+ +
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV---A 184
Query: 651 SQAIVNIVDFGLASRYKDTDDNHK 674
+ I DFGL+ + D K
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVK 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 16 NVWLRWVLRLALD---SLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
N+ L+ ++R +D +EY+ ++H DL N +L D + V + DFGL+ +
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMT---VCVADFGLSRKIYS 189
Query: 73 TD 74
D
Sbjct: 190 GD 191
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 584 NGNSYRFIIISKFGSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPAN 643
+G+ + F++ S+ G + L L+ + + +EY+ ++H DL N
Sbjct: 115 HGDLHAFLLASRIGENPFNL-------PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167
Query: 644 VLLGVDSSQAIVNIVDFGLASRYKDTD 670
+L D + V + DFGL+ + D
Sbjct: 168 CMLAEDMT---VCVADFGLSRKIYSGD 191
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ YVH DL N+L+ +S + + DFG++ +D
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLED 168
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 22 VLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKD 72
+LR ++Y+ YVH DL N+L+ +S + + DFG++ +D
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLED 162
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 74/204 (36%), Gaps = 42/204 (20%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+K+ +GK+LG G FG+V AT + + Y+T V A P
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKAT---------AFHLKGRAGYTT----VAVKMLKENASPS 68
Query: 556 HLEAWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE----- 609
L E LK + P + G +G + +K+GS L+ L E ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS-LRGFLRESRKVGPGY 127
Query: 610 -------------------FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDS 650
++ + ++ + ++Y+ VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 651 SQAIVNIVDFGLASRYKDTDDNHK 674
+ I DFGL+ + D K
Sbjct: 188 K---MKISDFGLSRDVYEEDSXVK 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 597 GSDLQK-LLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIV 655
G L K L+ + +E + N + + ++Y+ +VH DL NVLL ++
Sbjct: 93 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYA 149
Query: 656 NIVDFGLASRYKDTDDNH 673
I DFGL S+ DD++
Sbjct: 150 KISDFGL-SKALGADDSY 166
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 622 LLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHKAHIV 678
LL L + H +H DLKP N+L+ + + N FGLA + + A +V
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLAN---FGLARAFGIPVRCYSAEVV 163
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 42/200 (21%)
Query: 496 KKSWKVGKSLGSGGFGEVYSATDDVNDNKVDGYKYVMKVEYSTGPLFVEQNFYVRCAKPE 555
+K+ +GK+LG G FG+V AT + + Y+T V A P
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKAT---------AFHLKGRAGYTT----VAVKMLKENASPS 68
Query: 556 HLEAWKKE-KKLKTLGLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKE----- 609
L E LK + P + G +G + +K+GS L+ L E ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS-LRGFLRESRKVGPGY 127
Query: 610 -------------------FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDS 650
++ + ++ + ++Y+ VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 651 SQAIVNIVDFGLASRYKDTD 670
+ I DFGL+ + D
Sbjct: 188 K---MKISDFGLSRDVYEED 204
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L W +++A + Y+ G VH +L NVLL S + V + DFG+A
Sbjct: 136 LNWGVQIA-KGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVA 180
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 8.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L + S + + Y+ +VH DL N L+G +V I DFG++ T
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYST 188
Query: 670 D 670
D
Sbjct: 189 D 189
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 29.6 bits (65), Expect = 8.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 610 FSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDT 669
L L + S + + Y+ +VH DL N L+G +V I DFG++ T
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYST 182
Query: 670 D 670
D
Sbjct: 183 D 183
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 555 EHLEAWKKEKKLKTL-GLPTFYAMKGQQEHNGNSYRFIIISKFGSDLQKLLDEHKEFSLK 613
+ +E EK++ L G P F + F++ G DL + + F
Sbjct: 62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP 121
Query: 614 NTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 663
+ + + + L ++ G ++ DLK NV+L S+ + I DFG+
Sbjct: 122 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMC 168
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLA 67
L W +++A + Y+ G VH +L NVLL S + V + DFG+A
Sbjct: 118 LNWGVQIA-KGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVA 162
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 597 GSDLQKLLDEHKEFSLKNTLTIGSSLLDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVN 656
G DL + + F + + + + L ++ G ++ DLK NV+L S+ +
Sbjct: 426 GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIK 482
Query: 657 IVDFGLA 663
I DFG+
Sbjct: 483 IADFGMC 489
>pdb|3EGO|A Chain A, Crystal Structure Of Probable 2-Dehydropantoate
2-Reductase Pane From Bacillus Subtilis
pdb|3EGO|B Chain B, Crystal Structure Of Probable 2-Dehydropantoate
2-Reductase Pane From Bacillus Subtilis
Length = 307
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 76 NHKAHIVEKKSAHNGTLIYTSLVAHRGAKTTSRICDIEILAYNLLHLNTGSLPWTAYEQ- 134
N HI + K H G IY +V H + + D H G++ W+A++
Sbjct: 100 NGMGHIHDLKDWHVGHSIYVGIVEHGAVRKSDTAVD---------HTGLGAIKWSAFDDA 150
Query: 135 QPEKV 139
+P+++
Sbjct: 151 EPDRL 155
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 19 LRWVLRLALDSLEYIHHCGYVHADLKPANVLLGVDSSQAIVNIVDFGLASRYKDTDDNHK 78
L++++ +AL +EY+ + ++H DL N +L D + V + DFGL+ + D +
Sbjct: 150 LKFMVDIAL-GMEYLSNRNFLHRDLAARNCMLRDDMT---VCVADFGLSKKIYSGDYYRQ 205
Query: 79 AHI 81
I
Sbjct: 206 GRI 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,882,469
Number of Sequences: 62578
Number of extensions: 1094379
Number of successful extensions: 4898
Number of sequences better than 100.0: 936
Number of HSP's better than 100.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 2896
Number of HSP's gapped (non-prelim): 2082
length of query: 962
length of database: 14,973,337
effective HSP length: 108
effective length of query: 854
effective length of database: 8,214,913
effective search space: 7015535702
effective search space used: 7015535702
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)