RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13598
         (163 letters)



>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 61.1 bits (147), Expect = 9e-13
 Identities = 48/97 (49%), Positives = 66/97 (68%)

Query: 1   MCRYVQQTTNSPVDMRVGIHTGAVLAGVLGQRQWQFDVYSKDVELANKMEQSGLPGRVHI 60
               V++ T   V+MRVGIH+G V  GVLG R+WQFDV+S DV LAN ME  G  GR+HI
Sbjct: 94  AISLVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHI 153

Query: 61  SEKTLCYIDGNFEVEPAFGENREEALRQAGLKTFFIV 97
           ++ TL Y++G++EVEP  G  R   L++  ++TF I+
Sbjct: 154 TKATLSYLNGDYEVEPGCGGERNAYLKEHSIETFLIL 190



 Score = 34.9 bits (79), Expect = 0.002
 Identities = 17/41 (41%), Positives = 29/41 (70%)

Query: 111 RVHISEKTLCYIDGNFEVEPAFGENREEALRQAGLKTFFIV 151
           R+HI++ TL Y++G++EVEP  G  R   L++  ++TF I+
Sbjct: 150 RIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIETFLIL 190


>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 51.8 bits (123), Expect = 2e-09
 Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 1   MCRYVQQTTNSPVDMRVGIHTGAVLAGVLGQRQWQFDVYSKDVELANKMEQSGLPGRVHI 60
               + + + +   +RVGI+ G V+AGV+G ++ Q+D++   V +A++M+ +G+  ++ +
Sbjct: 104 KLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQV 163

Query: 61  SEKTLCYI-DGNFEVEP 76
           +E+T   +    +    
Sbjct: 164 TEETSLILQTLGYTCTC 180


>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
           [TaxId: 118562]}
          Length = 197

 Score = 47.3 bits (111), Expect = 8e-08
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 1   MCRYVQQTTNSPVDMRVGIHTGAVLAGVLGQRQ-WQFDVYSKDVELANKMEQSGLPGRVH 59
               V +    PV  R GIH G  + G+ G ++   F      V +A +++++  P  + 
Sbjct: 99  ERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIM 158

Query: 60  ISEKTLCYIDGNFEVE 75
           +S     Y+     ++
Sbjct: 159 VSAMVAQYVPDEEIIK 174


>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
           {Trypanosome (Trypanosoma brucei), different isoform
           [TaxId: 5691]}
          Length = 235

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 1/83 (1%)

Query: 5   VQQTTNSPVDMRVGIHTGAVLAGVLGQRQWQFDVYSKDVELANKMEQSGLPGRVHISEKT 64
           V     + + +RVGIHTG          +  +D Y +   +A + E     G+V ++   
Sbjct: 124 VYSRLWNGLRVRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVANGGQVLMTHAA 182

Query: 65  LCYIDGNFEVEPAFGENREEALR 87
              +      +       + ALR
Sbjct: 183 YMSLSAEDRKQIDVTALGDVALR 205


>d1vk1a_ d.268.1.2 (A:) Hypothetical protein PF0380 {Pyrococcus
          furiosus [TaxId: 2261]}
          Length = 232

 Score = 25.0 bits (54), Expect = 4.2
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 4/50 (8%)

Query: 44 ELANKMEQSGLPGRVHISEKTLCYIDGNFEVEPAFGENREEALRQAGLKT 93
          +    +  SG+  +  +  K    I G  E     G +R   L++ G K 
Sbjct: 29 DFIESVTGSGIFWKPMLLAK----IPGTDEYLIVDGHHRWAGLQKLGAKR 74


>d1o4wa_ c.120.1.1 (A:) Hypothetical protein AF0591 {Archaeon
           Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 125

 Score = 24.0 bits (52), Expect = 7.0
 Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 31  QRQWQFDVYSKDVELANKMEQSGLPGRVHISEKTLCYID 69
             ++   + + D EL  K +Q G+P   ++ E    +++
Sbjct: 86  AEKYGCILITNDKELKRKAKQRGIP-VGYLKEDKRVFVE 123


>d1xw3a1 d.268.1.4 (A:28-137) Sulfiredoxin {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 110

 Score = 23.7 bits (51), Expect = 8.7
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 2/62 (3%)

Query: 32 RQWQFDVYSKDVELANKMEQSGLPGRVHISEKTLCYIDGNFEVEPAFGENREEALRQAGL 91
               D  +K   L + + +             +    G        G +R  A +Q   
Sbjct: 26 LPSVLD-PAKVQSLVDTIREDPDSVPPID-VLWIKGAQGGDYFYSFGGCHRYAAYQQLQR 83

Query: 92 KT 93
          +T
Sbjct: 84 ET 85


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0533    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 597,184
Number of extensions: 26413
Number of successful extensions: 88
Number of sequences better than 10.0: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 14
Length of query: 163
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 84
Effective length of database: 1,322,926
Effective search space: 111125784
Effective search space used: 111125784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.1 bits)