BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13599
(120 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
G+VLVHC MG+SRS+T +LA+L++ + L EA++ ++ R++ PN GFLRQL LDN+L
Sbjct: 132 GRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLRQLQVLDNRL 191
Query: 113 NR 114
R
Sbjct: 192 GR 193
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 72.0 bits (175), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
G+VLVHC MG+SRS+T +LA+L++ + L EA++ ++ R++ PN GFLRQL LDN+L
Sbjct: 132 GRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHRNICPNSGFLRQLQVLDNRL 191
Query: 113 NR 114
R
Sbjct: 192 GR 193
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 47 LHRKLS---GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLR 103
+HR LS GK+LVHC +G+SRS+T +LAYL+L L EA++ ++ R + PN GFLR
Sbjct: 77 IHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLR 136
Query: 104 QLAYLDNQLNRS 115
QL LD +L +
Sbjct: 137 QLLALDRRLRQG 148
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 47 LHRKLS---GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLR 103
+HR LS GK+LVH +G+SRS+T +LAYL+L L EA++ ++ R + PN GFLR
Sbjct: 78 IHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLR 137
Query: 104 QLAYLDNQLNRS 115
QL LD +L +
Sbjct: 138 QLLALDRRLRQG 149
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQ 111
+G+VLVHC G SRS T ++AYL++++K + AL ++RQ+R++ PN GFL QL L+++
Sbjct: 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQLCQLNDR 174
Query: 112 LNRSA 116
L +
Sbjct: 175 LAKEG 179
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQ 111
+G+VLVHC G SRS T ++AYL++++K + AL ++RQ+R++ PN GFL QL L+++
Sbjct: 116 NGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQLCQLNDR 175
Query: 112 LNRSA 116
L +
Sbjct: 176 LAKEG 180
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 54 KVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
K+LVHC+MG SRS+T +LAYL++ K L +A++ + ++R V PN GFL+QL LD QL
Sbjct: 141 KILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNRCVLPNRGFLKQLRELDKQL 199
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQ 111
+G+VLVH G SRS T ++AYL++++K + AL ++RQ+R++ PN GFL QL L+++
Sbjct: 116 NGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQLCQLNDR 175
Query: 112 LNRSA 116
L +
Sbjct: 176 LAKEG 180
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAY 107
R+ GKVLVH GISRS T +AYL+ K+FRL EA ++Q R V PN+GF+ QL
Sbjct: 80 REKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQ 139
Query: 108 LDNQL 112
++++
Sbjct: 140 YESEI 144
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQ 111
G+VLVH GISRS+T LAYL++KK+ RL EA ++Q R + PN+ F+ QL ++Q
Sbjct: 82 GRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQ 141
Query: 112 L 112
+
Sbjct: 142 V 142
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 42 EEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDV-RPNYG 100
++I+S+ RK G LVHC G+SRS+T +AYL+ L EA ++ R V RPN G
Sbjct: 94 DKIHSVSRK-HGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVG 152
Query: 101 FLRQLAYLDNQL 112
F RQL + QL
Sbjct: 153 FWRQLIDYERQL 164
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDV-RPNYGFLRQLAY 107
+ G+VLVH GISRS+T LAYL+ ++ RL EA ++Q R V PN+ F+ QL
Sbjct: 78 KNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQ 137
Query: 108 LDNQL 112
+ Q+
Sbjct: 138 FETQV 142
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 34 NHRLC----PPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLL 89
N RLC P + I+S+ K G+ L+HC G+SRS+ LAYL+ L +A
Sbjct: 76 NSRLCDFFDPIADHIHSVEMK-QGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWT 134
Query: 90 RQSRD-VRPNYGFLRQLAYLDNQL 112
+ R +RPN GF QL + + QL
Sbjct: 135 KSCRPIIRPNSGFWEQLIHYEFQL 158
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 7 FSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGK--VLVHCLMGIS 64
F EK G+F + + ++ + PE I + LS VLVHCL G+S
Sbjct: 42 FFEKNGDFHYKQIPISDHWSQNLSRFF-------PEAIEFIDEALSQNCGVLVHCLAGVS 94
Query: 65 RSSTCILAYLILKKKFRLTEALRLL-RQSRDVRPNYGFLRQL 105
RS T +AYL+ K L +A L+ R+ ++ PN+ F+ QL
Sbjct: 95 RSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQL 136
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 42 EEIYSLHR-KLSGK-VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPN 98
E I +H +L G+ LVHCL G+SRS T ++AY++ F +AL +R R PN
Sbjct: 71 ESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPN 130
Query: 99 YGFLRQL 105
GF RQL
Sbjct: 131 VGFQRQL 137
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQLN 113
+L+HC G+SRS+T ++AYL+ + +T+A + ++ R + PN F+ QL + LN
Sbjct: 90 LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLN 149
Query: 114 RSAASQV 120
++
Sbjct: 150 NGVTPRI 156
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 7 FSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGK--VLVHCLMGIS 64
F EK G+F + + ++ + PE I + LS VLVH L G+S
Sbjct: 45 FFEKNGDFHYKQIPISDHWSQNLSRFF-------PEAIEFIDEALSQNCGVLVHSLAGVS 97
Query: 65 RSSTCILAYLILKKKFRLTEALRLL-RQSRDVRPNYGFLRQL 105
RS T +AYL+ K L +A L+ R+ ++ PN+ F+ QL
Sbjct: 98 RSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQL 139
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQLN 113
+L+HC G+SRS+T ++AYL+ + +T+A + ++ R + PN F+ QL + LN
Sbjct: 86 LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLN 145
Query: 114 RSAA 117
Sbjct: 146 NGVT 149
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDV-RPNYGFLRQL 105
+K K LVH MG+SRS++ ++AY + + + L A +++ R V +PN F+RQL
Sbjct: 78 KKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQL 135
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 41 PEEIYSLHRKLSGK---VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVR 96
PE I S + GK VLVH L GISRS T +AYL+ K + +A +++ + ++
Sbjct: 70 PEAI-SFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNIS 128
Query: 97 PNYGFLRQL 105
PN+ F+ QL
Sbjct: 129 PNFNFMGQL 137
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 36 RLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD- 94
R P +E ++ GKVLVH GISRS+ ++AY++ + +A +++ R
Sbjct: 74 RFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFC 133
Query: 95 VRPNYGFLRQL 105
+ PN GF+ QL
Sbjct: 134 INPNAGFVHQL 144
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQL 105
++ G VLVH G+SR++ ++ +L+ ++ T A L++ +R + PN GF+ QL
Sbjct: 78 KRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQL 135
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 54 KVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQL 112
K+L+HC G+SRS+T I+AY++ L + LL+ D + P+ G + QL + L
Sbjct: 119 KILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVAL 178
Query: 113 N 113
N
Sbjct: 179 N 179
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDV-RPNYGFLRQLAYLDN 110
G LV+C G SRS+ AYL+ + L A ++++ +R V PN GF QL +
Sbjct: 89 GGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQ 148
Query: 111 QLNRSA 116
L A
Sbjct: 149 TLQAQA 154
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDV-RPNYGFLRQL 105
G LVH GISRS+T + AY++ + L ++ +R + PN GF +QL
Sbjct: 84 GGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQL 138
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 54 KVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQL 112
K+L+H G+SRS+T I+AY++ L + LL+ D + P+ G + QL + L
Sbjct: 119 KILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVAL 178
Query: 113 N 113
N
Sbjct: 179 N 179
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 54 KVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAYLDNQL 112
K+L+H G+SRS+T I+AY++ L + LL+ D + P+ G + QL + L
Sbjct: 119 KILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVAL 178
Query: 113 N 113
N
Sbjct: 179 N 179
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEA--LRLLRQSRDVR----PNYGFLRQL 105
VLVHC G++RS ILAYL K K L L + RD+R N F RQ+
Sbjct: 128 VLVHCAAGVNRSGAXILAYLXSKNKESLPXLYFLYVYHSXRDLRGAFVENPSFKRQI 184
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKK 79
VLVHC+ G++RS ILAYL K K
Sbjct: 107 VLVHCVAGVNRSGAXILAYLXSKNK 131
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 56 LVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPN 98
LVHC+ GI R+ T + +YLIL + + A + + R VRP
Sbjct: 93 LVHCVGGIGRTGTILASYLILTEGLEVESA---IDEVRLVRPG 132
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR---DVRPN 98
V VHC G SRS+T + AYLI + EA+ + + R +RP+
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPS 138
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLT--EALRLLRQSRDVR----PNYGFLRQL 105
VLVH G++RS ILAYL+ K K L L + RD+R N F RQ+
Sbjct: 111 VLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQI 167
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 44 IYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLR 103
+Y ++ G VH G R+ L Y + ++L EA +LL R P +R
Sbjct: 98 LYKAVKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXEAHKLLXSKRSCFPKLDAIR 157
Query: 104 Q 104
Sbjct: 158 N 158
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 56 LVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPN 98
LVH + GI R+ T + +YLIL + + A + + R VRP
Sbjct: 93 LVHSVGGIGRTGTILASYLILTEGLEVESA---IDEVRLVRPG 132
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 26 TELVPTILNHRL-----CPP-PEEIYSLHRKL------SGKVLVHCLMGISRSSTCILAY 73
++ P + HRL CPP P++I + + V VHC +G R+ T + Y
Sbjct: 50 SDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACY 109
Query: 74 LILKKKFRLTEALRLLRQSR 93
L+ ++ +A+ +R+ R
Sbjct: 110 LVKERGLAAGDAIAEIRRLR 129
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 26 TELVPTILNHRL-----CPP-PEEIYSLHRKL------SGKVLVHCLMGISRSSTCILAY 73
++ P + HRL CPP P++I + + V VHC +G R+ T + Y
Sbjct: 51 SDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACY 110
Query: 74 LILKKKFRLTEALRLLRQSR 93
L+ ++ +A+ +R+ R
Sbjct: 111 LVKERGLAAGDAIAEIRRLR 130
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR 93
+ VHC G +R+ I A+L+ K + + A+ Q+R
Sbjct: 144 IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 182
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR 93
+ VHC G +R+ I A+L+ K + + A+ Q+R
Sbjct: 122 IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 160
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 14/66 (21%)
Query: 11 IGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCI 70
+G D G ++ EL+ I N P +LVHC GI R+ T I
Sbjct: 195 VGWPDHGVPESAASFDELLSVIKNCVTTSP--------------ILVHCSAGIGRTGTLI 240
Query: 71 LAYLIL 76
AY L
Sbjct: 241 GAYAAL 246
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 55 VLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR---DVRPN 98
V VH G SRS+T + AYLI + EA+ + + R +RP+
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPS 139
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 236 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 262
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 57 VHCLMGISRSSTCILAYLILKKKF-RLTEALRLLRQSR 93
+HC G R+ I AYL+ + KF + EAL + R
Sbjct: 116 IHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVR 153
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 261
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 52 SGKVLVHCLMGISRSSTCIL 71
+G VLVHC G+ R+ T I+
Sbjct: 236 TGPVLVHCSAGVGRTGTYIV 255
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 246 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 272
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 261
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 261
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKK 78
+G VLVHC G+ R+ T I+ +L++
Sbjct: 228 TGPVLVHCSAGVGRTGTYIVIDSMLQQ 254
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 15 DFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCI 70
D G DTT + + ++ PPE +LVHC G+ R+ T I
Sbjct: 210 DHGVPDTTDLLINFRYLVRDYMKQSPPE----------SPILVHCSAGVGRTGTFI 255
>pdb|3A9X|A Chain A, Crystal Structure Of Rat Selenocysteine Lyase
pdb|3A9X|B Chain B, Crystal Structure Of Rat Selenocysteine Lyase
pdb|3A9Y|A Chain A, Crystal Structure Of Rat Selenocysteine Lyase In Complex
With L-Cysteine
pdb|3A9Y|B Chain B, Crystal Structure Of Rat Selenocysteine Lyase In Complex
With L-Cysteine
pdb|3A9Z|A Chain A, Crystal Structure Of Ras Selenocysteine Lyase In Complex
With Selenopropionate
pdb|3A9Z|B Chain B, Crystal Structure Of Ras Selenocysteine Lyase In Complex
With Selenopropionate
Length = 432
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 50 KLSGKVLVHCLMGISRSSTCILAYLILKKK----FRLTEALRLLRQSRDVRPNYGFLRQL 105
K++G+V V ++ R +TC++ ++ + ++E R ++ +R G R L
Sbjct: 158 KVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVL 217
Query: 106 AYLD 109
+ D
Sbjct: 218 VHTD 221
>pdb|3MCB|B Chain B, Crystal Structure Of Nac Domains Of Human Nascent
Polypeptide- Associated Complex (Nac)
Length = 58
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 14 FDFGGQDTTKRITELVPTILN 34
F G TK++TE++P+ILN
Sbjct: 36 FTITGHAETKQLTEMLPSILN 56
>pdb|3LKX|A Chain A, Human Nac Dimerization Domain
Length = 66
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 14 FDFGGQDTTKRITELVPTILN 34
F G TK++TE++P+ILN
Sbjct: 36 FTITGHAETKQLTEMLPSILN 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,207,330
Number of Sequences: 62578
Number of extensions: 113148
Number of successful extensions: 331
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 52
length of query: 120
length of database: 14,973,337
effective HSP length: 82
effective length of query: 38
effective length of database: 9,841,941
effective search space: 373993758
effective search space used: 373993758
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)