RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13599
(120 letters)
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 97.7 bits (244), Expect = 2e-27
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYL 108
+ GK+LVHC +G+SRS+T +LAYL+L L EA++ ++ R + PN GFLRQL L
Sbjct: 82 SQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLRQLLAL 141
Query: 109 DNQLNR 114
D +L +
Sbjct: 142 DRRLRQ 147
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 97.0 bits (242), Expect = 8e-27
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
G+VLVHC G SRS T ++AYL++++K + AL ++RQ+R++ PN GFL QL L+++L
Sbjct: 116 GRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNREIGPNDGFLAQLCQLNDRL 175
Query: 113 NRS 115
+
Sbjct: 176 AKE 178
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 97.5 bits (243), Expect = 1e-26
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYL 108
K+LVHC+MG SRS+T +LAYL++ K L +A++ + ++R V PN GFL+QL L
Sbjct: 136 SDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNRCVLPNRGFLKQLREL 195
Query: 109 DNQLNRS 115
D QL +
Sbjct: 196 DKQLVQQ 202
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 97.1 bits (242), Expect = 1e-26
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
G+VLVHC MG+SRS+T +LA+L++ + L EA++ ++ R++ PN GFLRQL LDN+L
Sbjct: 132 GRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLRQLQVLDNRL 191
Query: 113 NRS 115
R
Sbjct: 192 GRE 194
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 94.3 bits (235), Expect = 8e-26
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+ +L+HC G+SRS+T ++AYL+ + +T+A + ++ R + PN F+ QL
Sbjct: 84 HQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLE 143
Query: 108 LDNQLNRSAASQV 120
+ LN ++
Sbjct: 144 FEEDLNNGVTPRI 156
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 93.0 bits (232), Expect = 1e-25
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+ VLVH L G+SRS T +AYL+ K L +A L+++ + ++ PN+ F+ QL
Sbjct: 82 LSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLD 141
Query: 108 LDNQLNRS 115
+ L
Sbjct: 142 FERSLREG 149
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 92.3 bits (230), Expect = 2e-25
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+ +L+HC G+SRS+T ++AYL+ + +T+A + ++ R + PN F+ QL
Sbjct: 80 HQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLE 139
Query: 108 LDNQLNRSA 116
+ LN
Sbjct: 140 FEEDLNNGV 148
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 92.7 bits (231), Expect = 2e-25
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+ G LV+C G SRS+ AYL+ + L A ++++ +R PN GF QL
Sbjct: 86 VRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQK 145
Query: 108 LDNQLNRSAASQ 119
+ L A
Sbjct: 146 YEQTLQAQAILP 157
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 92.8 bits (231), Expect = 4e-25
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
G+ L+HC G+SRS+ LAYL+ L +A + R +RPN GF QL +
Sbjct: 94 EMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIH 153
Query: 108 LDNQLNRSAASQV 120
+ QL +
Sbjct: 154 YEFQLFGKNTVHM 166
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 91.5 bits (228), Expect = 5e-25
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAY 107
+ G+VLVH GISRS+T LAYL++KK+ RL EA ++Q R + PN+ F+ QL
Sbjct: 78 KDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQ 137
Query: 108 LDNQL 112
++Q+
Sbjct: 138 FESQV 142
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 92.0 bits (229), Expect = 8e-25
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAY 107
+ G LVHC G+SRS+T +AYL+ L EA ++ R +RPN GF RQL
Sbjct: 100 SRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLID 159
Query: 108 LDNQLNRSAASQV 120
+ QL + ++
Sbjct: 160 YERQLFGKSTVKM 172
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 90.3 bits (225), Expect = 1e-24
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+K K LVH MG+SRS++ ++AY + + + L A +++ R +PN F+RQL
Sbjct: 78 KKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEE 137
Query: 108 LDNQL 112
L
Sbjct: 138 YQGIL 142
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 91.2 bits (227), Expect = 1e-24
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
R LVHCL G+SRS T ++AY++ F +AL +R R PN GF RQL
Sbjct: 80 RLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQE 139
Query: 108 LDNQLNR 114
+
Sbjct: 140 FEKHEVH 146
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 90.7 bits (226), Expect = 1e-24
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAY 107
R G LVH GISRS+T + AY++ + L ++ +R PN GF +QL
Sbjct: 81 RLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEE 140
Query: 108 LDNQLNR 114
++
Sbjct: 141 FGWASSQ 147
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 92.1 bits (229), Expect = 1e-24
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLAY 107
R+ GKVLVH GISRS T +AYL+ K+FRL EA ++Q R V PN+GF+ QL
Sbjct: 80 REKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQ 139
Query: 108 LDNQLNRSAASQ 119
++++ S +
Sbjct: 140 YESEILPSTPNP 151
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 90.0 bits (224), Expect = 2e-24
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
++ GKVLVH GISRS+ ++AY++ + +A +++ R + PN GF+ QL
Sbjct: 87 LQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQE 146
Query: 108 LDNQL 112
+
Sbjct: 147 YEAIY 151
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 89.5 bits (223), Expect = 3e-24
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
++ G VLVH G+SR++ ++ +L+ ++ T A L++ +R + PN GF+ QL
Sbjct: 78 KRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRT 137
Query: 108 LDNQLN 113
Sbjct: 138 YQEGKE 143
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 89.2 bits (222), Expect = 5e-24
Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLAY 107
+ VL+ G++++ ++A+L+ ++ A ++ + GF+ QL
Sbjct: 84 IQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKL 143
Query: 108 LDNQLNRS 115
+ +L +
Sbjct: 144 FEKKLEKM 151
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 87.9 bits (218), Expect = 3e-23
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 48 HRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD-VRPNYGFLRQLA 106
K+L+H G+SRS+T I+AY++ L + LL+ D + P+ G + QL
Sbjct: 113 ATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLM 172
Query: 107 YLDNQLN 113
+ LN
Sbjct: 173 EWEVALN 179
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 86.7 bits (215), Expect = 4e-23
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 48 HRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQLA 106
++ L V VHC G SRS+T + AYLI + EA+ + + R + L L
Sbjct: 85 YQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLK 144
Query: 107 YLDNQLNRSAA 117
++ AA
Sbjct: 145 EFHKEITARAA 155
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 82.8 bits (205), Expect = 3e-21
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 49 RKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLT-----EALRLLRQSRD-VRPNYGFL 102
+ + VLVHC G++RS ILAYL+ K K L +R R N F
Sbjct: 122 DQRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFK 181
Query: 103 RQL 105
RQ+
Sbjct: 182 RQI 184
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 81.3 bits (201), Expect = 9e-21
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 48 HRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLT-----EALRLLRQSRD-VRPNYGF 101
+ + VLVH G++RS ILAYL+ K K L +R R N F
Sbjct: 104 CDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSF 163
Query: 102 LRQL 105
RQ+
Sbjct: 164 KRQI 167
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 62.1 bits (150), Expect = 9e-13
Identities = 16/77 (20%), Positives = 29/77 (37%)
Query: 44 IYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLR 103
+Y ++ G VH G+ R+ L Y+ + ++L EA +LL R P +R
Sbjct: 98 LYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIR 157
Query: 104 QLAYLDNQLNRSAASQV 120
+ +
Sbjct: 158 NATIDILTGLKRKTVTL 174
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 52.8 bits (127), Expect = 4e-10
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 38 CPPPEEIYS----LHRKLS--GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQ 91
P P++I + + V VHC +G R+ T + YL+ ++ +A+ +R+
Sbjct: 69 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRR 128
Query: 92 SR-DVRPNYGFLRQL 105
R Y + +
Sbjct: 129 LRPGSIETYEQEKAV 143
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 53.5 bits (128), Expect = 9e-10
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 34 NHRLCPPPEEIYS---LHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLR 90
P + + G + VH G+ R+ T I Y++ + E + +R
Sbjct: 248 ADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVR 307
Query: 91 QSRDVRPNYGFLRQLAYL 108
RP Q +L
Sbjct: 308 I---CRPGSVIGPQQQFL 322
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 49.5 bits (118), Expect = 9e-09
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 38 CPPPEEIYSLHRKL---SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR 93
P + ++ + L LVHC+ GI R+ T + +YLIL + + A+ +R R
Sbjct: 72 VPSDSQFLTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVR 130
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 48.8 bits (116), Expect = 2e-08
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 34 NHRLCPPPEEIYS--------LHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEA 85
+ PP + + V VHC GI+R+ + YL+ EA
Sbjct: 87 PGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEA 146
Query: 86 LRLLRQSR-DVRPNYGFLRQL 105
+ ++R +++ L
Sbjct: 147 IDRFEKARGHKIERQNYVQDL 167
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 46.6 bits (110), Expect = 2e-07
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 32 ILNHRLCPPPEEIYS--------LHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLT 83
H CP E + R + VHC G +R+ I A+L+ K + +
Sbjct: 113 CKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIE 172
Query: 84 EALRLLRQSR 93
A+ Q+R
Sbjct: 173 AAVATFAQAR 182
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 45.4 bits (107), Expect = 3e-07
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDN 110
+ VHC+ G+ R+ + L+ +A+ L+R+ R Q+ ++
Sbjct: 110 PTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIRE---KRKGAINQTQMHWITK 164
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 37.0 bits (85), Expect = 5e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 53 GKVLVHCLMGISRSSTCILAYLI-LKKKFRLTEALRLLRQSRD 94
K L+H G+ RS L+ L +A+ LR R
Sbjct: 134 RKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRG 176
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 36.6 bits (83), Expect = 9e-04
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 47 LHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTE-ALRLLRQSR 93
+ + +H G R+ T + ++L+ KF + AL R
Sbjct: 114 MTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRR 161
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 35.2 bits (80), Expect = 0.003
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 39 PPPEEIYSLHRKLS-----GKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR 93
P ++ + HC G+ R++ ++ + ILK ++ + RQ
Sbjct: 214 PDDPDVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKL 273
Score = 32.9 bits (74), Expect = 0.016
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILK-KKFRLTEALRLLRQSRDVRPNY 99
+ HC G R++ + Y ++K L + L RQ + NY
Sbjct: 531 AWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILS--RQ-YLLGGNY 575
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 33.8 bits (76), Expect = 0.007
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 35 HRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKF-RLTEALRLLRQSR 93
+C + K +VHCL G + SS + A I + A+RLL R
Sbjct: 100 FAVCRNMYNWLLQNPK--NVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKR 157
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 33.7 bits (76), Expect = 0.008
Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Query: 36 RLCPPPEEIYSL--------HRKLSGKVLVHCLMGISRSSTCILAYLILKKKFR-LTEAL 86
P E I + +HC G R+ I AYL+ + KF EAL
Sbjct: 87 HNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEAL 146
Query: 87 RLLRQSRDVRP 97
+ R
Sbjct: 147 DFYGEVRTRDK 157
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 33.6 bits (76), Expect = 0.010
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 53 GKVLVHCLMGISRSSTCILAYLILK-KKFRLTEALRLLRQSR 93
+ H G+ R++ ++ +LK L + L RQ
Sbjct: 214 AWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDILY--RQHE 253
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.5 bits (76), Expect = 0.012
Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 38/111 (34%)
Query: 16 FGGQ-DTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCI--LA 72
FGGQ +T EL ++Y + VLV L I S+ + L
Sbjct: 160 FGGQGNTDDYFEEL-------------RDLYQTYH-----VLVGDL--IKFSAETLSELI 199
Query: 73 YLILKKKFRLTEALRLLR--QSRDVRPNYGFLR------------QLA-YL 108
L + T+ L +L ++ P+ +L QLA Y+
Sbjct: 200 RTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYV 250
Score = 25.8 bits (56), Expect = 4.8
Identities = 21/146 (14%), Positives = 41/146 (28%), Gaps = 56/146 (38%)
Query: 16 FGGQDTTKRITELVPTILNHRL---CPPPEEIY-SLHRKLSGKVLVH------------- 58
FGG+ KRI E ++ + E+I+ ++ +
Sbjct: 1676 FGGE-KGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQP 1734
Query: 59 CLMGISRSSTCILAYLILKKK--------------------------FRLTEALRLLRQS 92
L + ++ A+ LK K + + ++
Sbjct: 1735 ALTLMEKA-----AFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFY- 1788
Query: 93 RDVRPNYGFLRQLAYLDNQLNRSAAS 118
R G Q+A ++L RS
Sbjct: 1789 R------GMTMQVAVPRDELGRSNYG 1808
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 32.2 bits (73), Expect = 0.021
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 39 PPPEEIYSLHRKL----SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRD 94
P E++ + + VLVHCL R+S Y + + + + + D
Sbjct: 80 PKVEDVEAFFAAMDQHKGKDVLVHCLANY-RASAFAYLYQLKQG--QNPNMAQTMTPWND 136
Query: 95 VRPNYGFLRQL 105
Y + L
Sbjct: 137 ELAIYPKWQAL 147
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 32.0 bits (73), Expect = 0.034
Identities = 11/84 (13%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 15 DFGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYL 74
K + ++ + + P S +L+HC G ++
Sbjct: 504 VEQLPAEPKELISMIQVV--KQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLN 561
Query: 75 ILK-----KKFRLTEALRLLRQSR 93
+L+ + + + ++ LR++R
Sbjct: 562 LLESAETEEVVDIFQVVKALRKAR 585
Score = 25.5 bits (56), Expect = 6.3
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 46 SLHRKLSGKVLVHCLMGISRSSTCILAYLIL-----KKKFRLTEALRLLRQSR 93
+ SG ++VH G+ R+ T I +L + K + + LR+ R
Sbjct: 217 AFSNFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEAENKVDVYGYVVKLRRQR 269
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC,
heterodimer, chaperone; 1.90A {Homo sapiens}
Length = 58
Score = 29.7 bits (67), Expect = 0.046
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 14 FDFGGQDTTKRITELVPTILNH 35
F G TK++TE++P+ILN
Sbjct: 36 FTITGHAETKQLTEMLPSILNQ 57
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo
sapiens}
Length = 66
Score = 29.3 bits (66), Expect = 0.077
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 14 FDFGGQDTTKRITELVPTILNHRLCPPPEEIYSL 47
F G TK++TE++P+ILN + + SL
Sbjct: 36 FTITGHAETKQLTEMLPSILNQ---LGADSLTSL 66
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 30.2 bits (67), Expect = 0.15
Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 32/113 (28%)
Query: 2 ILSEVFSEK-IGEFDFGGQDTTKRITELVPTILNHRLCPPPEEIYSL-HRKLSGKVLVHC 59
IL VF + + FD K + ++ +IL+ + I L
Sbjct: 21 IL-SVFEDAFVDNFDC------KDVQDMPKSILSKEEI---DHIIMSKDAVSGTLRLFWT 70
Query: 60 LMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPNYGFL-RQLAYLDNQ 111
L+ + +KF + E LR NY FL + Q
Sbjct: 71 LLS-KQEEMV--------QKF-VEEVLR---------INYKFLMSPIKTEQRQ 104
Score = 29.4 bits (65), Expect = 0.27
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 15/78 (19%)
Query: 36 RLCPPPEEIYSLHRKLSGKVLVH-CLMGISRSSTCI-------LAY-LILKKKFRLTEAL 86
L E Y+LHR + + + + + L K E +
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL---KNIEHPERM 490
Query: 87 RLLRQSRDVRPNYGFLRQ 104
L R V ++ FL Q
Sbjct: 491 TLFRM---VFLDFRFLEQ 505
Score = 25.6 bits (55), Expect = 5.7
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 29/96 (30%)
Query: 25 ITELVPTILN--HRLC----PPPEEIYSLH-------RKLSGKVLVHCLMGISRSSTCIL 71
I V ++N H+ P E S+ KL + +H + +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH--------RSIVD 451
Query: 72 AYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAY 107
Y I K F + L+ D Y F + +
Sbjct: 452 HYNI-PKTFDSDD---LIPPYLD---QY-FYSHIGH 479
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 29.7 bits (67), Expect = 0.23
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)
Query: 52 SGKVLVHCLMGISRSST-CILAYLI--LKKK-----FRLTEALRLLR 90
G +VH G + C L L L+ + F++ + + L+R
Sbjct: 519 DGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMR 565
Score = 24.7 bits (54), Expect = 9.6
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 42 EEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLIL-----KKKFRLTEALRLLRQSR 93
+ +G VLVHC G+ R+ T I+ +L K + L+ +R R
Sbjct: 218 RRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQR 274
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 29.6 bits (67), Expect = 0.25
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 48 HRKLSGKVLVHCLMGISRSST-CILAYLI--LKKK-----FRLTEALRLLR 90
G + VHC G+ R+ L+ ++ ++ + F+ + LR R
Sbjct: 496 QFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQR 546
Score = 25.8 bits (57), Expect = 4.9
Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 46 SLHRKLSGKVLVHCLMGISRSSTCILAYLIL-----KKKFRLTEALRLLRQSR 93
+ + +G ++VHC G+ R+ I+ +L +K + + +R R
Sbjct: 203 ACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQR 255
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 28.5 bits (64), Expect = 0.49
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLIL-----KKKFRLTEALRLLRQSR 93
+ + VHC G R+ T I IL + + +A++ LR R
Sbjct: 518 NHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQR 564
Score = 26.2 bits (58), Expect = 3.7
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 46 SLHRKLSGKVLVHCLMGISRSSTCILAYLIL-----KKKFRLTEALRLLRQSR 93
+L+ +G ++VHC G+ R+ T I+ ++ ++K + E + +R R
Sbjct: 217 TLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQR 269
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein
O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB:
2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Length = 568
Score = 27.5 bits (61), Expect = 1.2
Identities = 7/72 (9%), Positives = 21/72 (29%), Gaps = 8/72 (11%)
Query: 51 LSGKV---LVHCLMGISRSSTCILAYL----ILKKKFRLTEALRLLRQSRDVRPNY-GFL 102
++ L+ + +A+L T +++ + P + +
Sbjct: 1 MTADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAV 60
Query: 103 RQLAYLDNQLNR 114
+L + R
Sbjct: 61 ARLGRVRWTQQR 72
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 27.0 bits (59), Expect = 1.2
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 55 VLVHCLMGISRSSTCILAYLILKK 78
VL+HC G R+ + L+K
Sbjct: 95 VLIHCKRGKHRTGCLVGCLRKLQK 118
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response,
DNA repair, gene regulation; 2.05A {Mus musculus}
Length = 474
Score = 26.9 bits (59), Expect = 1.7
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 74 LILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQLNRSAASQ 119
+ KK +T A + N L+ L+ + QL + +
Sbjct: 145 EVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDE 190
>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES;
2.00A {Vespula vulgaris}
Length = 331
Score = 26.0 bits (57), Expect = 3.1
Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 79 KFRLTEALRLLRQSRDVRPNYGFLRQLAYLDN 110
+ R+ EA+R+ + + Y D
Sbjct: 238 QGRVKEAVRISNNLKHSPKVLSYWW-YVYQDE 268
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 25.3 bits (56), Expect = 5.3
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 42 EEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLIL------KKKFRLTEALRLLRQSR 93
++ +R S ++VHC G R+ T IL ++L K+ + L +R R
Sbjct: 214 RKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQR 271
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like
repeat, protein transport; 2.90A {Saccharomyces
cerevisiae} SCOP: a.118.8.1
Length = 292
Score = 25.4 bits (55), Expect = 5.9
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 72 AYLILKKKFRLTEALRLLRQSRDVRPNYGFLRQLAYLDNQL 112
AY K A+ L + + + G R+ A +L
Sbjct: 83 AYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFEL 123
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 24.5 bits (54), Expect = 9.5
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 46 SLHRKLSGKVLVHCLMGISRSST-----CILAYLILKKKFRLTEALRLLRQSR 93
+ + + +G ++VHC G+ R+ T +L + ++K + + +R R
Sbjct: 219 ACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQR 271
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 24.6 bits (54), Expect = 9.6
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 11/55 (20%)
Query: 52 SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSRDVRPN-YGFLRQL 105
+ +LVHC GI R+ T I AY L + + Y + +
Sbjct: 222 TSPILVHCSAGIGRTGTLIGAYAA----------LLHIERGILTDSTVYSIVAAM 266
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.139 0.402
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,812,376
Number of extensions: 99722
Number of successful extensions: 425
Number of sequences better than 10.0: 1
Number of HSP's gapped: 406
Number of HSP's successfully gapped: 82
Length of query: 120
Length of database: 6,701,793
Length adjustment: 82
Effective length of query: 38
Effective length of database: 4,412,271
Effective search space: 167666298
Effective search space used: 167666298
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (23.8 bits)