RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13599
(120 letters)
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 75.2 bits (184), Expect = 7e-19
Identities = 31/82 (37%), Positives = 52/82 (63%)
Query: 33 LNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQS 92
L+ + I + +G+VLVHC G SRS T ++AYL++++K + AL ++RQ+
Sbjct: 91 LSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQN 150
Query: 93 RDVRPNYGFLRQLAYLDNQLNR 114
R++ PN GFL QL L+++L +
Sbjct: 151 REIGPNDGFLAQLCQLNDRLAK 172
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 68.2 bits (166), Expect = 2e-16
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 43 EIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGF 101
+ G+VLVH GISRS+T LAYL+ ++ RL EA ++Q R + PN+ F
Sbjct: 72 GFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSF 131
Query: 102 LRQLAYLDNQL 112
+ QL + Q+
Sbjct: 132 MGQLLQFETQV 142
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 65.6 bits (159), Expect = 2e-15
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 43 EIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGF 101
R + VLVH L GISRS T +AYL+ K + +A +++ + ++ PN+ F
Sbjct: 74 SFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNF 133
Query: 102 LRQLAYLDNQL 112
+ QL + L
Sbjct: 134 MGQLLDFERTL 144
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 60.5 bits (146), Expect = 4e-13
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 47 LHRKLSGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLRQSR-DVRPNYGFLRQL 105
R + VHC G +R+ I A+L+ K + + A+ Q+R +L++L
Sbjct: 110 NERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKEL 169
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 54.3 bits (130), Expect = 7e-11
Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Query: 34 NHRLCPPPEEIYSLHRKL---SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLLR 90
P + G + VH G+ R+ T I Y++ + E + +R
Sbjct: 88 ADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVR 147
Query: 91 QSRD---VRPNYGFLRQL 105
R + P FL
Sbjct: 148 ICRPGSVIGPQQQFLVMK 165
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 42.4 bits (99), Expect = 2e-06
Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Query: 48 HRKLSGKVLVHCLMGISRSSTCILAYLI-LKKKFRLTEALRLLRQSRDVR-----PNYGF 101
K K L+H G+ RS L+ L +A+ LR R Y +
Sbjct: 105 CLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNY 164
Query: 102 LRQLA-YLDNQL 112
L + L L
Sbjct: 165 LHEFRDKLAAHL 176
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 41.9 bits (98), Expect = 2e-06
Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 38 CPPPEEIYSLHRKL--------SGKVLVHCLMGISRSSTCILAYLILKKKF-RLTEALRL 88
P E I L + +HC G R+ I AYL+ + KF + EAL
Sbjct: 82 PPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDF 141
Query: 89 LRQSRDVRP-NYGFLRQLAYL 108
+ R Q Y+
Sbjct: 142 YGEVRTRDKKGVTIPSQRRYV 162
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 38.1 bits (88), Expect = 5e-05
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)
Query: 38 CPPPEEIYSLHRKL--------SGKVLVHCLMGISRSSTCILAYLILKKKFRLTEALRLL 89
P + + + + VHC+ G+ R+ + LI + + +A++ +
Sbjct: 67 PPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI-EGGMKYEDAVQFI 125
Query: 90 RQSRD---VRPNYGFLRQ 104
RQ R +L +
Sbjct: 126 RQKRRGAFNSKQLLYLEK 143
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 37.7 bits (87), Expect = 1e-04
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 14/85 (16%)
Query: 39 PPPEEIYSLHRKLS-----GKVLVHCLMGISRSSTCILAYLILK-KKFRLTEALRLLRQS 92
P PE I + HC G+ R++ ++ +LK L + L +
Sbjct: 194 PTPENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHEI 253
Query: 93 RDVRPNYG--------FLRQLAYLD 109
+ Y +
Sbjct: 254 GGFYYGEFPIKTKDKDSWKTKYYRE 278
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 32.0 bits (72), Expect = 0.011
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 35 HRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKKK---FRLTEALRLLRQ 91
R + ++ + ++H G+ R++ I A + + + + + +R
Sbjct: 194 KRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRV 253
Query: 92 SR 93
R
Sbjct: 254 QR 255
>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus
influenzae [TaxId: 727]}
Length = 144
Score = 24.4 bits (53), Expect = 4.0
Identities = 9/70 (12%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 16 FGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLI 75
+D ++ +L +LN+R+ + + L+ + L+ +S+ + A
Sbjct: 33 VEKEDNREKADKLAEKVLNYRIFSDENDKMN----LNVQQAQGELLIVSQ--FTLAADTQ 86
Query: 76 LKKKFRLTEA 85
+ ++
Sbjct: 87 KGLRPSFSKG 96
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal
domain) {Escherichia coli [TaxId: 562]}
Length = 43
Score = 22.7 bits (49), Expect = 5.2
Identities = 6/38 (15%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 41 PEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLILKK 78
+ + ++ ++ G + M I+RS+ Y ++ +
Sbjct: 8 RDAVLNMWQQGLGASHISKTMNIARSTV----YKVINE 41
>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia
coli [TaxId: 562]}
Length = 145
Score = 23.5 bits (51), Expect = 6.1
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 16 FGGQDTTKRITELVPTILNHRLCPPPEEIYSLHRKLSGKVLVHCLMGISRSSTCILAYLI 75
D ++ L +L +R+ E + L+ + ++ +S+ + A
Sbjct: 33 VEKDDDEQKANRLCERVLGYRIFSDAEGKMN----LNVQQAGGSVLVVSQ--FTLAADTE 86
Query: 76 LKKKFRLTEA 85
+ ++
Sbjct: 87 RGMRPSFSKG 96
>d2ipqx1 a.4.5.74 (X:396-528) Hypothetical protein STY4665
{Salmonella typhi [TaxId: 90370]}
Length = 133
Score = 22.9 bits (49), Expect = 9.9
Identities = 6/33 (18%), Positives = 9/33 (27%), Gaps = 4/33 (12%)
Query: 47 LHRKLSGKVLVHCLMGIS----RSSTCILAYLI 75
HR + C + + YLI
Sbjct: 80 KHRVSDSRRFWQCCLYEEPGGRGRYKKLTGYLI 112
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.139 0.402
Gapped
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 438,717
Number of extensions: 19055
Number of successful extensions: 71
Number of sequences better than 10.0: 1
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 17
Length of query: 120
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 46
Effective length of database: 1,391,576
Effective search space: 64012496
Effective search space used: 64012496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.3 bits)