Query psy13600
Match_columns 186
No_of_seqs 175 out of 307
Neff 3.9
Searched_HMMs 13730
Date Fri Aug 16 23:23:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13600.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13600hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uf3a_ d.159.1.6 (A:) Hypothe 49.1 18 0.0013 24.8 5.8 44 127-173 32-75 (228)
2 d1qlwa_ c.69.1.15 (A:) A novel 19.6 15 0.0011 26.1 0.9 16 162-177 59-74 (318)
3 d2yvta1 d.159.1.6 (A:4-260) Un 18.1 49 0.0035 22.8 3.4 27 148-174 73-99 (257)
4 d1k8qa_ c.69.1.6 (A:) Gastric 17.1 16 0.0011 26.6 0.4 19 160-178 57-75 (377)
5 d1bh9a_ a.22.1.3 (A:) TAF(II)1 15.1 37 0.0027 20.3 1.8 23 13-36 12-34 (45)
6 d1nnwa_ d.159.1.5 (A:) Hypothe 14.5 1.5E+02 0.011 20.1 5.5 28 147-175 49-76 (251)
7 d2hy1a1 d.159.1.11 (A:10-265) 13.7 54 0.0039 23.5 2.8 46 122-173 40-91 (256)
8 d2dsta1 c.69.1.39 (A:2-123) Hy 11.6 37 0.0027 23.2 1.2 12 162-173 22-33 (122)
9 d1iv0a_ c.55.3.8 (A:) Hypothet 11.2 2E+02 0.015 18.6 5.7 49 114-167 40-91 (98)
10 d1qfma2 c.69.1.4 (A:431-710) P 10.3 46 0.0033 23.1 1.3 17 159-175 198-214 (280)
No 1
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=49.05 E-value=18 Score=24.84 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=29.5
Q ss_pred CccEEeecCCCCCCCCCCCchhhHHHHHHHHhcCCCceEEEcCCCce
Q psy13600 127 EAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSS 173 (186)
Q Consensus 127 dAaLIvlnLP~Prk~~~~~~~~lYMawLe~LT~gLpPvLLVRGng~e 173 (186)
++++|++.==.-..+ ..+..|..+++.|.+-=.|++.|.||+..
T Consensus 32 ~~D~vv~~GDl~~~~---~~~~~~~~~~~~L~~~~~pv~~i~GNHD~ 75 (228)
T d1uf3a_ 32 GADAIALIGNLMPKA---AKSRDYAAFFRILSEAHLPTAYVPGPQDA 75 (228)
T ss_dssp TCSEEEEESCSSCTT---CCHHHHHHHHHHHGGGCSCEEEECCTTSC
T ss_pred CCCEEEECCCCCCCC---ccchHHHHhhhhhccccceEEEEecCCCc
Confidence 566666541111111 13567888999998766799999999984
No 2
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}
Probab=19.62 E-value=15 Score=26.07 Aligned_cols=16 Identities=6% Similarity=0.208 Sum_probs=12.3
Q ss_pred CceEEEcCCCceeeeE
Q psy13600 162 ERVLMVRGSNSSHHCY 177 (186)
Q Consensus 162 pPvLLVRGng~eVLTf 177 (186)
+|+|||||.+.+--+|
T Consensus 59 ~PvvllHG~~~~~~~w 74 (318)
T d1qlwa_ 59 YPITLIHGCCLTGMTW 74 (318)
T ss_dssp SCEEEECCTTCCGGGG
T ss_pred CcEEEECCCCCCcCcc
Confidence 6799999988764444
No 3
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=18.07 E-value=49 Score=22.75 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=22.1
Q ss_pred hhHHHHHHHHhcCCCceEEEcCCCcee
Q psy13600 148 SNYMEFLEVLTEGLERVLMVRGSNSSH 174 (186)
Q Consensus 148 ~lYMawLe~LT~gLpPvLLVRGng~eV 174 (186)
..|..|+..|.+--.|+.+|.||+...
T Consensus 73 ~~~~~~~~~L~~~~~pv~~i~GNHD~~ 99 (257)
T d2yvta1 73 ETLDKFFREIGELGVKTFVVPGKNDAP 99 (257)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSCC
T ss_pred hhHHHHHHHHHhcCCcEEEEeCCCcch
Confidence 467788888887668999999999743
No 4
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=17.08 E-value=16 Score=26.56 Aligned_cols=19 Identities=11% Similarity=0.036 Sum_probs=13.8
Q ss_pred CCCceEEEcCCCceeeeEe
Q psy13600 160 GLERVLMVRGSNSSHHCYR 178 (186)
Q Consensus 160 gLpPvLLVRGng~eVLTf~ 178 (186)
.-|||||+||-+.+-.+|.
T Consensus 57 ~~~~vlllHG~~~~~~~~~ 75 (377)
T d1k8qa_ 57 RRPVAFLQHGLLASATNWI 75 (377)
T ss_dssp TCCEEEEECCTTCCGGGGS
T ss_pred CCCeEEEECCCccchhHHh
Confidence 3489999999876655543
No 5
>d1bh9a_ a.22.1.3 (A:) TAF(II)18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.12 E-value=37 Score=20.31 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=17.7
Q ss_pred cCCCCCCCCChhhHHHHHhhccCc
Q psy13600 13 VPTHSRRPPSTETVHCLDNIDSPL 36 (186)
Q Consensus 13 v~~~~~~~p~~~~~~~~~~~~~p~ 36 (186)
+.+| .+.|.+||+.+.++|+.-|
T Consensus 12 ~~GD-~~~P~~ETv~llEdiv~~~ 34 (45)
T d1bh9a_ 12 GFGD-DQNPYTESVDILEDLVIEF 34 (45)
T ss_dssp HTTS-CSSCCHHHHHHHHHHHHHH
T ss_pred HcCC-CCCCCHHHHHHHHHHHHHH
Confidence 4455 4567999999999998655
No 6
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=14.51 E-value=1.5e+02 Score=20.12 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHhcCCCceEEEcCCCceee
Q psy13600 147 ESNYMEFLEVLTEGLERVLMVRGSNSSHH 175 (186)
Q Consensus 147 ~~lYMawLe~LT~gLpPvLLVRGng~eVL 175 (186)
+...+++|..|.+. +++..|+||+..-+
T Consensus 49 ~~evi~~l~~l~~~-~~v~~v~GNHD~~~ 76 (251)
T d1nnwa_ 49 PKEVIEVIKDLTKK-ENVKIIRGKYDQII 76 (251)
T ss_dssp HHHHHHHHHHHHHH-SCEEEECCHHHHHH
T ss_pred cHHHHHHHHHHhhc-CCEEEEeccHHHHH
Confidence 56678888887765 47999999998643
No 7
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.74 E-value=54 Score=23.52 Aligned_cols=46 Identities=15% Similarity=0.319 Sum_probs=27.7
Q ss_pred HhcCCCccEEeec--CCCCCCCCCCCchhhH---HHHHHHHhcCC-CceEEEcCCCce
Q psy13600 122 VNKSHEAQLVILN--LPGPPKETNIERESNY---MEFLEVLTEGL-ERVLMVRGSNSS 173 (186)
Q Consensus 122 re~S~dAaLIvln--LP~Prk~~~~~~~~lY---MawLe~LT~gL-pPvLLVRGng~e 173 (186)
.+...++++|+++ |- ..+ ....| .+.++.+...+ .|+++|.||+..
T Consensus 40 ~~~~~~pD~vl~~GDl~--~~g----~~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~ 91 (256)
T d2hy1a1 40 NQSGLRPDAIVFTGDLA--DKG----EPAAYRKLRGLVEPFAAQLGAELVWVMGNHDD 91 (256)
T ss_dssp HHHTCCCSEEEECSCCB--SSC----CHHHHHHHHHHHHHHHHHHTCEEEECCCTTSC
T ss_pred HhcCCCCCEEEECCCCC--CCC----ChhHHHHHHHHhhhhhhhcCCCEEEEcccccc
Confidence 3445678888876 32 111 23344 44555444444 499999999974
No 8
>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]}
Probab=11.60 E-value=37 Score=23.23 Aligned_cols=12 Identities=33% Similarity=0.354 Sum_probs=10.2
Q ss_pred CceEEEcCCCce
Q psy13600 162 ERVLMVRGSNSS 173 (186)
Q Consensus 162 pPvLLVRGng~e 173 (186)
||+||+||+...
T Consensus 22 ~pvlllHG~~~~ 33 (122)
T d2dsta1 22 PPVLLVAEEASR 33 (122)
T ss_dssp SEEEEESSSGGG
T ss_pred CcEEEEeccccc
Confidence 899999997654
No 9
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=11.19 E-value=2e+02 Score=18.60 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCccEEeecCCCCCCCCCCCc---hhhHHHHHHHHhcCCCceEEE
Q psy13600 114 AVKLNEVIVNKSHEAQLVILNLPGPPKETNIER---ESNYMEFLEVLTEGLERVLMV 167 (186)
Q Consensus 114 ~lrLNELIre~S~dAaLIvlnLP~Prk~~~~~~---~~lYMawLe~LT~gLpPvLLV 167 (186)
.-.|.+++.++ +...||+-||....|..-.. ...|...|.. .+ -||.++
T Consensus 40 ~~~l~~ii~e~--~i~~iVvGlP~~~dG~~~~~~~~v~~f~~~L~~--~~-lpv~~~ 91 (98)
T d1iv0a_ 40 VEALLDFVRRE--GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRA--RG-VEVELW 91 (98)
T ss_dssp HHHHHHHHHHH--TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHH--TT-CEEEEE
T ss_pred HHHHHHHHHhh--ccceeEcccccccCCCcCHHHHHHHHHHHHHhh--CC-CCEEEE
Confidence 35899999998 57889999998776551011 2456666543 24 356555
No 10
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=10.34 E-value=46 Score=23.09 Aligned_cols=17 Identities=6% Similarity=0.147 Sum_probs=13.5
Q ss_pred cCCCceEEEcCCCceee
Q psy13600 159 EGLERVLMVRGSNSSHH 175 (186)
Q Consensus 159 ~gLpPvLLVRGng~eVL 175 (186)
...||+|+++|....++
T Consensus 198 ~~~pP~LiihG~~D~~V 214 (280)
T d1qfma2 198 IQYPSMLLLTADHDDRV 214 (280)
T ss_dssp CCCCEEEEEEETTCCSS
T ss_pred cCCCceEEeecccCCCC
Confidence 35679999999987665
Done!